BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014122
         (430 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/427 (67%), Positives = 351/427 (82%), Gaps = 11/427 (2%)

Query: 4   RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
           RS   +++  L+   KLG  LG C+R  SS  ++RFAALWGNGD+GRLGLGSLES+WRP 
Sbjct: 3   RSCMRVSQSALQS--KLG--LGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPA 58

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
           VCSAF+ HSL A+ACGGAHTLFLTE+GCVYA GLNDFGQLG+S +  Y+ EPL +S L K
Sbjct: 59  VCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK 118

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +++ I+ GY+HS+AIT DGELYMWGKNSNGQLGLGKKAA  + +P+KVECL+GI  K  A
Sbjct: 119 KIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVA 178

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           LG E SVA T  G+ LSWGAGGSGRLGHG ESS+LGF R++SEY PRLI+ LEG+KVK  
Sbjct: 179 LGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNV 238

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG LHSACIDENG V+IFG+RA+DK  F+E  +A  PS+IS+LPYS++V CGGYHTCV+
Sbjct: 239 AAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVI 298

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           +S GEL+TWGSNENGCLG+G ++ +H PER++GPFS++PV Q       VSCGWKHTAAI
Sbjct: 299 SSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQ-------VSCGWKHTAAI 351

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           SEG + TWGWGGS+GTFS+DGHSSGGQLG G+DVD+I P +V F E+V+ALQVSCGFNHT
Sbjct: 352 SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHT 411

Query: 424 GALLEYV 430
           GA+LEY+
Sbjct: 412 GAILEYI 418


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 286/407 (70%), Positives = 335/407 (82%), Gaps = 7/407 (1%)

Query: 24  LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
           LG   R  S    +RFAALWGNGDYGRLGLG+L+S+W+PVVC AF   +L A+ACGGAHT
Sbjct: 18  LGFPTRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHT 77

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           LFLTE GCVYATGLNDFGQLG+SE+  YS+EPL + G +K+VVQIS GY+HS AITVDGE
Sbjct: 78  LFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGE 137

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LYMWGKN++GQLGLGK+A  ++P+PTKVE L GI  K AALG E SVA++ GG   SWG 
Sbjct: 138 LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGI 197

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G SGRLGHG ESS+LGF +S SEYTPRLIK+LEG+KVK  AAG L+SAC DENG V++FG
Sbjct: 198 GVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFG 257

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           +R ++K+  +E + A +PSLIS+LP S+EV CGGYHTCVLT+ GELYTWGSNENGCLGIG
Sbjct: 258 ERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIG 317

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
           S DV+H PE+VQGPF +S V Q       VSCGWKHTAAISEG++ TWGWGGS+GTFSE 
Sbjct: 318 SSDVIHLPEKVQGPFLKSSVSQ-------VSCGWKHTAAISEGRVFTWGWGGSNGTFSEV 370

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           GHSS GQLGHG+DVDYI+PT V FGE+VKALQVSCGFNHTGA+LEY 
Sbjct: 371 GHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILEYA 417


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 300/422 (71%), Positives = 347/422 (82%), Gaps = 13/422 (3%)

Query: 15  KQDIKLGSKLGIC-KRWISSTL---QRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAF 68
           K  + +G  LG C KRW+SS+    ++R AA+WGNGDYGRLG G+L+S WRP +   S+F
Sbjct: 3   KNSVLIGGGLGYCYKRWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSF 62

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
              +LK+++CGGAHTLFLTETG VYATGLNDFGQLG+S N  Y +EPL +SGLKKE+VQI
Sbjct: 63  HNSNLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQI 122

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S GYHHS AITVDGELY WGKNSNGQLGLGKKA  V+P+PTKVECLSGI  K  AL  E 
Sbjct: 123 SAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEH 182

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+AVT GG+ LSWG GGSGRLGHG +SS+LGF RS+SEYTPR IK+LEGVKVK  AAG L
Sbjct: 183 SIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLL 242

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           HSACIDENG VYIFG++AVDK+ F + N+A  PS+I KLPYS+EV CGGYHTCV+TSGGE
Sbjct: 243 HSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGE 302

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
           LYTWGSNENGCLG GSIDVLH PERV+GPF  SPV++       VSCGWKHTAAISEG +
Sbjct: 303 LYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEK-------VSCGWKHTAAISEGNV 355

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            TWGWGGSHGTFSEDG SSGGQLGHG+D DY++PT+V F + +KAL+VSCGFNHTGA+LE
Sbjct: 356 FTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAILE 415

Query: 429 YV 430
            V
Sbjct: 416 SV 417


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 273/401 (68%), Positives = 322/401 (80%), Gaps = 8/401 (1%)

Query: 29  RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
           RW +S   +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++  LK +ACGGAHTLFLTE
Sbjct: 88  RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 147

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           +G VYATGLN+FGQLGIS+   +S EP+ +  + KE + IS GY+HS  +T DGELYMWG
Sbjct: 148 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 206

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            NSNGQLGLGKK+AK + +PTKV+ L GI  K+AALG + S+AV  GG+V SWG G SGR
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 266

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK  AAG LHSAC+DENG VYIFG+RA +
Sbjct: 267 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 326

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
           ++ F E N A  PSLIS L   EEV CGGYHTCVLT GG+LY+WGSNENGCLG GS  V 
Sbjct: 327 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 386

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 388
           H PERV+GPFS+SPV +       VSCGWKHTAAIS G I TWGWGGSHGTFS DGHSSG
Sbjct: 387 HLPERVEGPFSKSPVSK-------VSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSG 439

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           GQLGHG+DVDY+ PT ++ GENVK +QVSCGFNHTGA+LEY
Sbjct: 440 GQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAILEY 480


>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC4-like [Glycine max]
          Length = 404

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/393 (68%), Positives = 329/393 (83%), Gaps = 8/393 (2%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           +RF ALWGNGD+GRLGLG+L+S+W+PVVC AF   +LKA+ACGGAHTLFLT+ GCVYATG
Sbjct: 19  KRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTDNGCVYATG 78

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LNDFGQLG+SE+  YS+EPL + G +K+VVQ+S GY+HS AITVDGELYMWGKN++ QLG
Sbjct: 79  LNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQLG 138

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LGK+A  ++P+PTKVE L+GI  K AALG + S+A++ GG+  SWG G SGRLGHG ESS
Sbjct: 139 LGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISDGGEAFSWGVGVSGRLGHGHESS 198

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           ILGF +S SEYTPRLIK+LEG+KVK  A+G L+SAC DENG V++FG+RA++++  +  +
Sbjct: 199 ILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRLKAMS 258

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            A +PSLI +LP S +VVCGGYHTCVLT+ GELYTW SNENGCLGIGS DV+H PE++ G
Sbjct: 259 DATKPSLIGELP-SSKVVCGGYHTCVLTNSGELYTWXSNENGCLGIGSSDVIHLPEKIXG 317

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
           PF +S V Q+       SCGWK+TAAISEG++ TWGWGGS+GTFSE GHSS GQLGHG+D
Sbjct: 318 PFLKSSVSQL-------SCGWKNTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSD 370

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           VDYI+PT V FGE+VKALQVSCGFNHTGA+LEY
Sbjct: 371 VDYINPTRVCFGEDVKALQVSCGFNHTGAILEY 403



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 30/211 (14%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+  +G   V  WG G  GRLG G            S++ P +        +K  A G  
Sbjct: 13  SLRASGKRFVALWGNGDFGRLGLGNLD---------SQWKPVVCPAFRDRTLKAIACGGA 63

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSEEVVCGGY-HTCVLTSG 306
           H+  + +NG VY  G     ++   E  H +  P  +         V  GY H+C +T  
Sbjct: 64  HTLFLTDNGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVD 123

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           GELY WG N +  LG+G      +P  V  P     ++ I  +I + + G  H+ AIS+ 
Sbjct: 124 GELYMWGKNTSVQLGLGK----RAPNIVPLPTKVEYLNGI--NIKMAALGSDHSLAISDG 177

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
           G+  +WG G S            G+LGHG++
Sbjct: 178 GEAFSWGVGVS------------GRLGHGHE 196


>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
 gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 434

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 274/416 (65%), Positives = 332/416 (79%), Gaps = 7/416 (1%)

Query: 14  LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
           L +D KLG     C RW+SS   +RFAA+WG+GDYGRLGLG+L+S+W P VCSA   HS+
Sbjct: 25  LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            A+ACGGAHTLFLTET  V+ATGLND GQLG+S+   ++++PL +SGL K+++ IS GY+
Sbjct: 85  TAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYY 144

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI  +  ALG E SVAVT
Sbjct: 145 HSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVT 204

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV   AAG LHSAC 
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACT 264

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           DENG  ++FG+++++KM F    +A  PS+IS++PY+EEV CGGYHTCV+T GGELYTWG
Sbjct: 265 DENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWG 324

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
           SNENGCLG  S  V HSP RV+GPF ES V Q       VSCGWKHTAAIS+  + TWGW
Sbjct: 325 SNENGCLGTDSTYVSHSPVRVEGPFLESTVSQ-------VSCGWKHTAAISDNNVFTWGW 377

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           GGSHGTFS DGHSSGGQLGHG+DVDY  P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 378 GGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433


>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 434

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/414 (65%), Positives = 333/414 (80%), Gaps = 7/414 (1%)

Query: 16  QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA 75
           +D KLG     C+RW+S+   +RFAA+WG+GDYGRLGLG+L+S+W P  CSA   HS++A
Sbjct: 27  KDSKLGPIGVSCRRWLSNESGKRFAAMWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRA 86

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +ACGGAHTLFLTET  V+ATGLND GQLG+S+   ++++PL +SGL K+++ IS GY+HS
Sbjct: 87  VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHS 146

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           +AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI  +  ALG E SVAVT G
Sbjct: 147 AAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDG 206

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KVK  AAG LHSAC DE
Sbjct: 207 GEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDE 266

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           NG  ++FG+R+++KM F    +A  PS+IS++PY+E V CGGYHTCV+T GGELYTWGSN
Sbjct: 267 NGSAFMFGERSINKMGFGGVRNATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSN 326

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
           ENGCLG  S  V HSP RV+GPF ES V Q       VSCGWKHTAAIS+ K+ TWGWGG
Sbjct: 327 ENGCLGTDSTYVSHSPVRVEGPFLESTVSQ-------VSCGWKHTAAISDNKVFTWGWGG 379

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           SHGTFS DGHSSGGQLGHG+DVDY  P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 380 SHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433


>gi|13548329|emb|CAC35876.1| putative protein [Arabidopsis thaliana]
          Length = 435

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/426 (62%), Positives = 324/426 (76%), Gaps = 26/426 (6%)

Query: 14  LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
           L +D KLG     C RW+SS   +RFAA+WG+GDYGRLGLG+L+S+W P VCSA   HS+
Sbjct: 25  LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84

Query: 74  KALACGGAHTLFLT----------ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
            A+ACGGAHTLFLT          ET  V+ATGLND GQLG+S+   ++++PL +SGL K
Sbjct: 85  TAVACGGAHTLFLTVSDNKLTHVTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK 144

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +++ IS GY+HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI  +  A
Sbjct: 145 DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVA 204

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           LG E SVAVT GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV   
Sbjct: 205 LGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNV 264

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG LHSAC DENG  ++FG+++++KM F    +A  PS+IS++PY+EEV CG       
Sbjct: 265 AAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACG------- 317

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             GGELYTWGSNENGCLG  S  V HSP RV+GPF ES V Q       VSCGWKHTAAI
Sbjct: 318 --GGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQ-------VSCGWKHTAAI 368

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           S+  + TWGWGGSHGTFS DGHSSGGQLGHG+DVDY  P +V+ G+NV+A+ +SCGFNHT
Sbjct: 369 SDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHT 428

Query: 424 GALLEY 429
            A+LE+
Sbjct: 429 AAVLEH 434


>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
 gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
          Length = 418

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 301/397 (75%), Gaps = 12/397 (3%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCV 92
           ++R AALWGNGDYGRLGLG LESRW P VC  F   +     +LACGGAHTLFLT++G V
Sbjct: 28  RQRVAALWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRV 87

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           +ATGLNDFGQLG+  ++ ++LEP+ +SG  + VV++S G HHS A+T DG+L++WG+NS 
Sbjct: 88  FATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSG 147

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLGLGK A KV+  PTKV+CL+    K  ALG E S+AVT  G+VLSWGA GSGRLGHG
Sbjct: 148 GQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHG 207

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
           ++SSILGF  +TSEYTPRLIK  +G+K+K  AAG LHSACIDE G ++IFG +   +  F
Sbjct: 208 RQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT--EKGF 265

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
              N A RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G  D++ SPE
Sbjct: 266 GRSNEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPE 325

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
            ++    + PV +       VSCGWKHTA IS   I TWGWGG++GTF E+GHSSGGQLG
Sbjct: 326 ILKSSLFKLPVSK-------VSCGWKHTAVISGDDIYTWGWGGANGTFFEEGHSSGGQLG 378

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           HGNDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 379 HGNDVDYFEPMMVPFGKNARAVHVSCGFNHTGAIYEY 415


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/402 (59%), Positives = 302/402 (75%), Gaps = 17/402 (4%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
           +RR AALWGNGDYGRLG+G+LESRW P  C  F        +     +LACGGAHTLFLT
Sbjct: 30  RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           E+G V+A GLNDFGQLGI  ++ +SLEP+ +SG  ++VV++S G HHS A+T DG+L+ W
Sbjct: 90  ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+NS+GQLGLGK+A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 209

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG +  
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +K   + G+   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G  D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
           + SPE ++    + PV +       VSCGWKHTA IS G I TWGWGG++GTF E+GHSS
Sbjct: 328 VRSPEVLKSSLFKFPVSK-------VSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSS 380

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           GGQLGHGNDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 381 GGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 422


>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
 gi|194695574|gb|ACF81871.1| unknown [Zea mays]
 gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 418

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/409 (59%), Positives = 303/409 (74%), Gaps = 18/409 (4%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACIDE G +
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTL 252

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +IFG +   +  F   N   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGC
Sbjct: 253 FIFGQKT--EKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGC 310

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
           LG+G  D++ SPE ++    + PV +       VSCGWKHTA +S   I TWGWGG++GT
Sbjct: 311 LGLGGTDMVRSPEILKSSLFKLPVSK-------VSCGWKHTAVVSGDDIYTWGWGGANGT 363

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           F E+GHSSGGQLGHGNDVDY  P +V FG N +A+ VSCGFNHTGA+ E
Sbjct: 364 FFEEGHSSGGQLGHGNDVDYFEPMMVPFGTNARAVHVSCGFNHTGAIYE 412


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/402 (59%), Positives = 302/402 (75%), Gaps = 17/402 (4%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
           +RR AALWGNGDYGRLG+G+LESRW P  C  F        +     +LACGGAHTLFLT
Sbjct: 30  RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           E+G V+A GLNDFGQLGI  ++ +SLEP+ +SG  ++VV++S G HHS A+T DG+L+ W
Sbjct: 90  ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+NS+GQLGLGK+A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSWGAAGAG 209

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG +  
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +K   + G+   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G  D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
           + SPE ++    + PV +       VSCGWKHTA IS G I TWGWGG++GTF E+GHSS
Sbjct: 328 VRSPEVLKSSLFKFPVSK-------VSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSS 380

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           GGQLGHGNDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 381 GGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 422


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/412 (57%), Positives = 298/412 (72%), Gaps = 20/412 (4%)

Query: 29  RWISS--------TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALA 77
           RW+S+           RR AALWGNGDYGRLGLG+LESRW P  C  F   +     +LA
Sbjct: 17  RWLSTEAVAGSGEPAWRRVAALWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLA 76

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           CGGAHTLFLT++G V+ATGLNDFGQLGI  +  + ++P+ ++G  ++VVQIS G HHS A
Sbjct: 77  CGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKVVQISAGNHHSCA 136

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +T DGEL++WGKNS+GQLGLGK   KV+  P KV+ L+ +  +  ALG E S+AVT GG+
Sbjct: 137 VTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTEGGE 196

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
            LSWGA G+GRLGHG +SSILGF   +SEYTPRLIK L+GVK+K  AAG LHSACIDE G
Sbjct: 197 ALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKG 256

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            ++IFG +   + +F   N A RP+++ ++ +SEEV CGGYHTC LT GG+LY+WGSNEN
Sbjct: 257 TLFIFGQKT--EKVFGRSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGGDLYSWGSNEN 314

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           GCLG+G   ++ SPE ++    + PV +       VSCGWKHTA IS   I TWGWGG++
Sbjct: 315 GCLGLGVTGMVRSPEVLRSTLFKLPVSK-------VSCGWKHTAVISGEDIYTWGWGGAN 367

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           GTF E+G SSGGQLGHGNDVDY  P +V  G N +A+ VSCGFNHTGA+ EY
Sbjct: 368 GTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTGAIFEY 419


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/398 (59%), Positives = 293/398 (73%), Gaps = 12/398 (3%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF---EKHSLKALACGGAHTLFLTETGCV 92
           +RR AALWGNGD+GRLGLG+LESRW P  C  F         +L+CGGAHTLFLTE G V
Sbjct: 29  RRRVAALWGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRV 88

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           +ATGLNDFGQLGI  ++ ++L+P+ +SG  ++VVQIS G HHS A+T DGEL++WGKNS+
Sbjct: 89  FATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSS 148

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLGLGK A KV+  P KV+ L+ +  K  ALG E S+ VT  G+ LSWGA G GRLGHG
Sbjct: 149 GQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHG 208

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
            +SS LGF  +++EYTPRLIK L+G+K+K  AAG LHSACIDE G V+IFG +  +K+L 
Sbjct: 209 HKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQK-TEKVLG 267

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           +  N A RPS++ ++ +SEEV CGGYHTC +T  G+LY+WGSNENGCLG+G   ++  PE
Sbjct: 268 RS-NDAPRPSVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPE 326

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
            V     + PV +       VSCGWKHTA IS   I TWGWGG++GTF E+GHSSGGQLG
Sbjct: 327 VVSSSLFKLPVSK-------VSCGWKHTAVISGEDIYTWGWGGANGTFFEEGHSSGGQLG 379

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           HGNDVDY  P +V   +N +A+ VSCGFNHTGA+LEY 
Sbjct: 380 HGNDVDYCEPMMVELHKNARAVHVSCGFNHTGAILEYA 417


>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
           [Ricinus communis]
 gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
           [Ricinus communis]
          Length = 374

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/328 (65%), Positives = 264/328 (80%), Gaps = 2/328 (0%)

Query: 28  KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLF 85
           +RW+SS   +R+AA+WGNGD+GRLG GSL+S+WRP  ++ S F  HSLK++ACGGAHTLF
Sbjct: 11  RRWMSSEAGKRYAAVWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLF 70

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           LTETGCVYATGLNDFGQLGIS N+ Y+ EP+++SGL+KE++QIS GYHHS AITVDGELY
Sbjct: 71  LTETGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAITVDGELY 130

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           MWG+NSNGQLGLGKKA +++P+PTKVE L+G+  K  ALG E S+AVT  G+ LSWG GG
Sbjct: 131 MWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEHSIAVTDRGEALSWGLGG 190

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            GRLGH  +S    F  STSEYTPR IK+LE VKVK  AAG LHSACID NG V++FG+ 
Sbjct: 191 FGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVFVFGEV 250

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +VD+  F E   A  PS++ KLP + EV CGGYHTCV+TSGGELY WG NENGCLGIGS 
Sbjct: 251 SVDRTGFGEAIGAEIPSMVGKLPCANEVSCGGYHTCVVTSGGELYAWGVNENGCLGIGSF 310

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLV 353
           + LH+PERVQGPF  SPV+++C  ++++
Sbjct: 311 NSLHAPERVQGPFLRSPVEKVCLDVMVI 338



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 118/303 (38%), Gaps = 37/303 (12%)

Query: 87  TETGCVYAT--GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDG 142
           +E G  YA   G  DFG+LG           L +S       +  I+ G  H+  +T  G
Sbjct: 16  SEAGKRYAAVWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLFLTETG 75

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            +Y  G N  GQLG+    +     P KV  L      Q + G+  S A+T  G++  WG
Sbjct: 76  CVYATGLNDFGQLGISGNLSYTTE-PVKVSGLQKEIM-QISAGYHHSCAITVDGELYMWG 133

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
              +G+LG G+++  +  L +  EY       L G+ +K+ A G  HS  + + G    +
Sbjct: 134 RNSNGQLGLGKKAQRIVPLPTKVEY-------LNGLTIKLVALGSEHSIAVTDRGEALSW 186

Query: 263 GDRAVDKM---------LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYT 311
           G     ++          F        P  I KL     + V  G  H+  +   G ++ 
Sbjct: 187 GLGGFGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVFV 246

Query: 312 WGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
           +G       G G       P  V + P +             VSCG  HT  ++  G++ 
Sbjct: 247 FGEVSVDRTGFGEAIGAEIPSMVGKLPCANE-----------VSCGGYHTCVVTSGGELY 295

Query: 370 TWG 372
            WG
Sbjct: 296 AWG 298


>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Cucumis sativus]
          Length = 386

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/317 (66%), Positives = 253/317 (79%), Gaps = 1/317 (0%)

Query: 29  RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
           RW +S   +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++  LK +ACGGAHTLFLTE
Sbjct: 71  RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 130

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           +G VYATGLN+FGQLGIS+   +S EP+ +  + KE + IS GY+HS  +T DGELYMWG
Sbjct: 131 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 189

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            NSNGQLGLGKK+AK + +PTKV+ L GI  K+AALG + S+AV  GG+V SWG G SGR
Sbjct: 190 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 249

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK  AAG LHSAC+DENG VYIFG+RA +
Sbjct: 250 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 309

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
           ++ F E N A  PSLIS L   EEV CGGYHTCVLT GG+LY+WGSNENGCLG GS  V 
Sbjct: 310 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 369

Query: 329 HSPERVQGPFSESPVDQ 345
           H PERV+GPFS+SPV +
Sbjct: 370 HLPERVEGPFSKSPVSK 386


>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
 gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
          Length = 400

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/345 (59%), Positives = 264/345 (76%), Gaps = 9/345 (2%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           FLTE+G V+A GLNDFGQLGI  ++ +SLEP+ +SG  ++VV++S G HHS A+T DG+L
Sbjct: 62  FLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG+NS+GQLGLGK+A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA 
Sbjct: 122 FAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAA 181

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
           G+GRLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG 
Sbjct: 182 GAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQ 241

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           +  +K   + G+   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G 
Sbjct: 242 K-TEKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGG 299

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
            D++ SPE ++    + PV +       VSCGWKHTA IS G I TWGWGG++GTF E+G
Sbjct: 300 TDMVRSPEVLKSSLFKFPVSK-------VSCGWKHTAVISGGDIYTWGWGGANGTFFEEG 352

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           HSSGGQLGHGNDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 353 HSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 397



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 164/355 (46%), Gaps = 52/355 (14%)

Query: 37  RRFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FAA  G  D+G+LG+G S+     P+  S F++  ++ ++ G  H+  +T  G ++A 
Sbjct: 68  RVFAA--GLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVE-VSAGNHHSCAVTADGKLFAW 124

Query: 96  GLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNG 153
           G N  GQLG+ +  G  +  P ++  L    V+ ++ G  HS A T +GE+  WG    G
Sbjct: 125 GRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 184

Query: 154 QLGLGKKAAKV-------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +LG G K + +          P  ++ L G+  K+ A G   S  +   G +  +G    
Sbjct: 185 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG---- 240

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
                  + +  GF RS  E  P +++E+     ++A  G+ H+  + ++G +Y +G   
Sbjct: 241 -------QKTEKGFGRSGDELRPTVVEEVP-FSEEVACGGY-HTCVVTDSGDLYSWGSNE 291

Query: 267 VDKMLFQEGNHARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGELYTW---------- 312
              +     +  R P ++     K P S +V CG  HT V+ SGG++YTW          
Sbjct: 292 NGCLGLGGTDMVRSPEVLKSSLFKFPVS-KVSCGWKHTAVI-SGGDIYTWGWGGANGTFF 349

Query: 313 --GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
             G +  G LG G+      P  V+  F ++         V VSCG+ HT AI E
Sbjct: 350 EEGHSSGGQLGHGNDVDYFEPMMVE--FGKN------ARAVHVSCGFNHTGAIFE 396


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  368 bits (944), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 193/430 (44%), Positives = 264/430 (61%), Gaps = 23/430 (5%)

Query: 4   RSLTAMTKYY---LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
           RS+    + Y    K  ++L  K G  KRW+         ALWGNGD GRLGL    S++
Sbjct: 2   RSVIKRRRAYGLTAKNKVELSGKAG--KRWV---------ALWGNGDQGRLGLSESGSQF 50

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            PV+C A E H   +++CGGAHTL LT+ G V+ATGLN  GQLG+      S +P+ + G
Sbjct: 51  EPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHG 110

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
                V I+ G +HS+AIT  GE Y+WG+NS GQLGLGK+A  V   P K+E L+G+  K
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLK 170

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             ALG + S+ +   G+VLSWG    G LGHG+ +    F + T+EYTPR+I  LE +++
Sbjct: 171 ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQI 230

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           +  +AG +HSAC D++G +Y FG  ++ ++     N A +P  I  LP    + CGGYHT
Sbjct: 231 RSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCGGYHT 290

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             +T  G++YTWGSNE+GCLG G       P R++   +E+ + +I       SCGWKHT
Sbjct: 291 GAITQDGDIYTWGSNEHGCLGSG-FRASSKPLRLES-LAEAFMSEI-------SCGWKHT 341

Query: 361 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           AAIS+G I +WGWGGS+GT++    SSGGQLG G D D+  P  +   + + AL VSCGF
Sbjct: 342 AAISDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGF 401

Query: 421 NHTGALLEYV 430
           NHT A+LE +
Sbjct: 402 NHTAAILEEI 411


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  368 bits (944), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 186/400 (46%), Positives = 254/400 (63%), Gaps = 9/400 (2%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           +S    +R+ ALWGNGD GRLGL    S++ PV+C A E H   +++CGGAHTL LT+ G
Sbjct: 21  VSGKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKG 80

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            V+ATGLN  GQLG+      S +P+ + G     V I+ G +HS+AIT  GE Y+WG+N
Sbjct: 81  RVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWGRN 140

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           S GQLGLGK+A  V   P K+E L+G+  K  ALG + S+ +   G+VLSWG    G LG
Sbjct: 141 SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLG 200

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG+ +    F + T+EYTPR+I  LE ++V+  +AG +HSAC D++G +Y FG  ++ ++
Sbjct: 201 HGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQL 260

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                N A +P  I  LP    + CGGYHT  +T  G++YTWGSNE+GCLG G       
Sbjct: 261 GLGNNNDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSG-FRASSK 319

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           P R++   +E+ + +I       SCGWKHTAAIS+G I +WGWGGS+GT++    SSGGQ
Sbjct: 320 PLRLES-LAEAFMSEI-------SCGWKHTAAISDGYIFSWGWGGSYGTYATQAESSGGQ 371

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LG G D D+  P  +   + + AL VSCGFNHT A+LE +
Sbjct: 372 LGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILEEI 411


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score =  355 bits (911), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 193/401 (48%), Positives = 248/401 (61%), Gaps = 16/401 (3%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           + R+ ALWGNGDYGRLG  S ES W P VC + +     ALACGGAHTL LTE G VYA+
Sbjct: 7   KHRWVALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYAS 66

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNG 153
           GLND+GQLG+  + G+S+E L + GL  E     I+ G  HS+AI+ DG +YMWG+N+ G
Sbjct: 67  GLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQG 126

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGLGK+    +     VE L     +  ALG E S+A++  G+VLSWG   +GRLGHG+
Sbjct: 127 QLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGE 186

Query: 214 ---ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
               SS+    R +SEYTPRL+K    VKV   AAG  HSAC+DE G ++ FG     ++
Sbjct: 187 GHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQL 246

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVL 328
                     P  +  +P  EE+ CGGYHT  ++  G+LY WGSNE GCLG G    +  
Sbjct: 247 GLGGDRDISEPKRVPVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNAT 306

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 387
             P  V+G      V Q       V CGWKHT A++ +G +  WGWGGS GT   DG SS
Sbjct: 307 SLPMLVEGALESLRVTQ-------VQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSS 359

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           GGQLG GN+ D++ PT V   +N+KA+Q+SCGFNH+GA+LE
Sbjct: 360 GGQLGLGNENDFLEPTQVK-SKNMKAIQISCGFNHSGAILE 399


>gi|77551420|gb|ABA94217.1| uvb-resistance protein uvr8, possible, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 362

 Score =  322 bits (824), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 183/402 (45%), Positives = 231/402 (57%), Gaps = 80/402 (19%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
           +RR AALWGNGDYGRLG+G+LESRW P  C  F        +     +LACGGAHT    
Sbjct: 30  RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHT---- 85

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
                                   S EP+ +SG  ++VV++S G HHS A+T        
Sbjct: 86  ----------------------SSSPEPIEVSGFDEKVVEVSAGNHHSCAVT-------- 115

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
                        A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA G+G
Sbjct: 116 ------------GAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 163

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG +  
Sbjct: 164 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 222

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +K+ F       RP+++ +L      +    +   LTSG                   D+
Sbjct: 223 EKVGFGRSGDELRPTVVEELYQCLSKLRMFAYIKFLTSG------------------TDM 264

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
           + SPE ++    + PV +       VSCGWKHTA IS G I TWGWGG++GTF E+GHSS
Sbjct: 265 VRSPEVLKSSLFKFPVSK-------VSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSS 317

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           GGQLGHGNDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 318 GGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 359


>gi|357464831|ref|XP_003602697.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
           truncatula]
 gi|355491745|gb|AES72948.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
           truncatula]
          Length = 244

 Score =  317 bits (813), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 152/215 (70%), Positives = 179/215 (83%), Gaps = 7/215 (3%)

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S I+ FL+S SEY+PRLIK+LEG+KVK  AAG L SAC DENG V+IFGD+ +DK+L + 
Sbjct: 36  SIIMYFLKSCSEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKLLLKG 95

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            ++  +PSLIS+LPY+EEV CGGYHTCVLT+ GELYTWGSNENGCLGIGS   +H PE+V
Sbjct: 96  TSNTTKPSLISELPYAEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYAIHLPEKV 155

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           QGPF ES       S+V VSCGWKHTAAIS G+I TWGWGGS+GTFS+DGHSSGGQLGHG
Sbjct: 156 QGPFLES-------SVVQVSCGWKHTAAISGGRIFTWGWGGSNGTFSDDGHSSGGQLGHG 208

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           +DVDYI+P+ V F E+VKALQVSCGFNHTGA+ EY
Sbjct: 209 SDVDYINPSRVCFAEDVKALQVSCGFNHTGAIFEY 243



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 33/214 (15%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S + P +    E   +K +A G   +    E G V+  G     +L + +    + +P  
Sbjct: 46  SEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKL-LLKGTSNTTKPSL 104

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           IS L     +++ G +H+  +T  GELY WG N NG LG+G   A  I +P KV+   G 
Sbjct: 105 ISELPY-AEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYA--IHLPEKVQ---GP 158

Query: 178 FTK----QAALGFEQSVAVTGGGKVLSWGAGGS------------GRLGHGQESSILGFL 221
           F +    Q + G++ + A++ GG++ +WG GGS            G+LGHG +   +   
Sbjct: 159 FLESSVVQVSCGWKHTAAIS-GGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYI--- 214

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
                  P  +   E VK    + GF H+  I E
Sbjct: 215 ------NPSRVCFAEDVKALQVSCGFNHTGAIFE 242


>gi|413924972|gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 263

 Score =  294 bits (753), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 147/238 (61%), Positives = 180/238 (75%), Gaps = 9/238 (3%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACIDE G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKG 250



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 44/244 (18%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLG G   S     R +    P  +         +A  G  H+  + +NGRV+
Sbjct: 33  WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86

Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
             G     ++ +     H   P  IS       EV  G +H+C +T+ G+L+ WG N  G
Sbjct: 87  ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTS---IVLVSCGWKHTAAIS-EGKILTWGWG 374
            LG+G         +  G    +P    C +   +  V+ G +H+ A++ EG++L+WG  
Sbjct: 147 QLGLG---------KGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAA 197

Query: 375 GSHGTFSEDGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTG 424
           GS            G+LGHG             +Y    I NF + +K  +++ G  H+ 
Sbjct: 198 GS------------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSA 244

Query: 425 ALLE 428
            + E
Sbjct: 245 CIDE 248


>gi|413924969|gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 263

 Score =  291 bits (744), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 146/238 (61%), Positives = 179/238 (75%), Gaps = 9/238 (3%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACID  G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDGKG 250



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 44/242 (18%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLG G   S     R +    P  +         +A  G  H+  + +NGRV+
Sbjct: 33  WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86

Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
             G     ++ +     H   P  IS       EV  G +H+C +T+ G+L+ WG N  G
Sbjct: 87  ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTS---IVLVSCGWKHTAAIS-EGKILTWGWG 374
            LG+G         +  G    +P    C +   +  V+ G +H+ A++ EG++L+WG  
Sbjct: 147 QLGLG---------KGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAA 197

Query: 375 GSHGTFSEDGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTG 424
           GS            G+LGHG             +Y    I NF + +K  +++ G  H+ 
Sbjct: 198 GS------------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSA 244

Query: 425 AL 426
            +
Sbjct: 245 CI 246


>gi|413924970|gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 261

 Score =  290 bits (743), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 145/235 (61%), Positives = 178/235 (75%), Gaps = 9/235 (3%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACID
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACID 247



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 44/242 (18%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLG G   S     R +    P  +         +A  G  H+  + +NGRV+
Sbjct: 33  WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86

Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
             G     ++ +     H   P  IS       EV  G +H+C +T+ G+L+ WG N  G
Sbjct: 87  ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTS---IVLVSCGWKHTAAIS-EGKILTWGWG 374
            LG+G         +  G    +P    C +   +  V+ G +H+ A++ EG++L+WG  
Sbjct: 147 QLGLG---------KGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAA 197

Query: 375 GSHGTFSEDGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTG 424
           GS            G+LGHG             +Y    I NF + +K  +++ G  H+ 
Sbjct: 198 GS------------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSA 244

Query: 425 AL 426
            +
Sbjct: 245 CI 246


>gi|294463585|gb|ADE77321.1| unknown [Picea sitchensis]
          Length = 243

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 140/246 (56%), Positives = 176/246 (71%), Gaps = 7/246 (2%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           ALG E S+A+T  GKVLSWG G +GRLGHG +SS+  FL  +SE+TP+LIK LEG+KV  
Sbjct: 3   ALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCK 62

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            AAG LHS+CIDENG V+ FG   + ++       +  PS++  LP+ ++V CGGYHTC 
Sbjct: 63  IAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFVQQVACGGYHTCA 122

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           ++S G+LYTWGS+ENGCLG+GS  +  SPERV+G      V +       VSCGWKHTA 
Sbjct: 123 ISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSE-------VSCGWKHTAV 175

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           IS G + TWGWGGS+GTFS+DG SSGGQLG GND DY+ P+ V F  N +ALQ+SCGFNH
Sbjct: 176 ISGGNVFTWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLEPSRVQFDRNFQALQISCGFNH 235

Query: 423 TGALLE 428
           T A+ E
Sbjct: 236 TAAIFE 241



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 42/260 (16%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI-------PTKVECLSGIFTK 180
           I+ G  HS A+T DG++  WG   NG+LG G +++    +       P  ++ L GI   
Sbjct: 2   IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVC 61

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           + A G   S  +   G V ++G G   +LG       LG ++ +S   P ++K+L  V+ 
Sbjct: 62  KIAAGLLHSSCIDENGTVFTFGQGRMYQLG-------LGHMKDSS--VPSIVKDLPFVQ- 111

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--SKLP-YSEEVVCGG 297
           ++A  G+ H+  I  +G +Y +G      +     + A  P  +  S LP +  EV CG 
Sbjct: 112 QVACGGY-HTCAISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSEVSCGW 170

Query: 298 YHTCVLTSGGELYTW---GSN---------ENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
            HT V+ SGG ++TW   GSN           G LG+G+      P RVQ        D+
Sbjct: 171 KHTAVI-SGGNVFTWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLEPSRVQ-------FDR 222

Query: 346 ICTSIVLVSCGWKHTAAISE 365
              ++  +SCG+ HTAAI E
Sbjct: 223 NFQALQ-ISCGFNHTAAIFE 241



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 36/235 (15%)

Query: 43  WGNGDYGRLGLGSLESRWR---------PVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WG G+ GRLG G   S ++         P +    E   +  +A G  H+  + E G V+
Sbjct: 21  WGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCKIAAGLLHSSCIDENGTVF 80

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
             G     QLG+      S+ P  +  L   V Q++ G +H+ AI+  G+LY WG + NG
Sbjct: 81  TFGQGRMYQLGLGHMKDSSV-PSIVKDLPF-VQQVACGGYHTCAISSSGDLYTWGSSENG 138

Query: 154 QLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS------ 206
            LGLG K+  + P P +VE  L  +   + + G++ + AV  GG V +WG GGS      
Sbjct: 139 CLGLGSKS--LAPSPERVEGSLLPLHVSEVSCGWKHT-AVISGGNVFTWGWGGSNGTFSD 195

Query: 207 ------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
                 G+LG G +   L          P  ++     +    + GF H+A I E
Sbjct: 196 DGFSSGGQLGLGNDFDYL---------EPSRVQFDRNFQALQISCGFNHTAAIFE 241


>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 418

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 158/413 (38%), Positives = 230/413 (55%), Gaps = 29/413 (7%)

Query: 31  ISSTLQRRFAAL-WGNGDYGRLGLGSLESR---WRPVVCSAFE------KHSLKALACGG 80
           + +  +R + AL  GNGD+GRLG GS +     W P   + F          ++A+A GG
Sbjct: 17  VLTQYRREYIALSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGG 76

Query: 81  AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           AH++FL   G V+  GLN  GQLG S  + +S EP+ +  L  EVV ++ G  H+  + V
Sbjct: 77  AHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVR-LDVEVVSVAAGNGHTLCVDV 135

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVL 199
           DG ++ +GKN+ GQLG G        IP K+  L+      Q A G E S+AV   G+V 
Sbjct: 136 DGCVWAFGKNTAGQLGTGNVDGT---IPRKIGALAKEARVAQVACGAEHSLAVADDGRVY 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTS--EYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           SWG+   G LGHG E+   G+   T+  E  PRL++ LE  KV   AAG +HSACID+ G
Sbjct: 193 SWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRG 252

Query: 258 RVYIFGDRAVDKMLF--QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
            +Y +G    +++    +  +H   PS +  L +  E+ CGG H+   T+ G + +WG+N
Sbjct: 253 NLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAG-VVSWGAN 311

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
           ++G LG G     HS  +   P    P+         ++ GWKH+A I+ GK+  WG+GG
Sbjct: 312 QHGELGHGH----HSDIKSAVP---KPIKMGSRGWSKLAAGWKHSAGIANGKLFAWGFGG 364

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           S G+++++  SSGGQLG GN+ D+  P  V+    VK   VSCGFNHT AL++
Sbjct: 365 SMGSYADEKMSSGGQLGLGNEFDFWEPHEVSVPGEVK--DVSCGFNHTLALVD 415


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/398 (39%), Positives = 220/398 (55%), Gaps = 19/398 (4%)

Query: 37  RRFAALWGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           RR  A +GNGD GRLG  SLE  S   P V  A     LKA+ACGGAHT  + ++G VY 
Sbjct: 2   RRVLATFGNGDCGRLGH-SLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYT 60

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            GLND GQLG          P  ++ + + VV +S GY+H+  +   G ++ +G N  GQ
Sbjct: 61  WGLNDKGQLGHDSEDSEVGLPGEVA-MPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQ 119

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LGLGK    ++  P  V+ L        A G E S+A+T GG+V SWG   +GRLGHG  
Sbjct: 120 LGLGKDVV-LVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSA 178

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           +    F  S+ E+ PRL++  E ++V+  +AG +HSA +   G  +++G     ++ F  
Sbjct: 179 TPRRLF-GSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGS 237

Query: 275 GNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 P+++  L  S   V CG  H+  L  GG +  WG+N+NG LG G        E+
Sbjct: 238 DEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGH-------EK 290

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGT-FSEDGHS-SGGQ 390
            Q P   S V  +  S   ++ GWKH+AA++  GK+ TWGWGGS GT  S +G + +GGQ
Sbjct: 291 QQQPKRPSKVPGV--SAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQ 348

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           LGHGND DY  P  V++    +   V+CG NHT A++E
Sbjct: 349 LGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVE 386


>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 367

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 208/379 (54%), Gaps = 21/379 (5%)

Query: 35  LQRRF---AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           + RR     A WGNGDYGRLG    +S   P +  A       ++ACGGAHT  +   G 
Sbjct: 1   MARRLIGKVACWGNGDYGRLGHDCAKSLAVPSLVPALINQKFLSVACGGAHTAAVAVDGS 60

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  GLND GQLG   +  +S++  +   L +  VQ++ G+ H+  +T    ++  G N 
Sbjct: 61  VFTWGLNDHGQLGHYTHQEFSMQEPQEVFLPEAAVQVAMGHSHTLFLTESSSVWAVGSNM 120

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           +GQLGL ++  +   +P +V+ L G      A G + S+AV+  G++ +WG    G LGH
Sbjct: 121 HGQLGLRRRGGQEW-VPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGH 179

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G+ S    F  +  E  PRL+K+L+G+ V+ AA G ++S C+D NG  Y +G       L
Sbjct: 180 GRSS----FAATQDESAPRLVKKLKGIMVQSAAGGLMNSGCVDANGAAYFWGPYLRQSPL 235

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            +    A  P ++S +   +++  GG H   LT GG + T+G++E G LG+GS D     
Sbjct: 236 TKAATEANEPEVLSGVQNVKQLALGGRHLVALTHGGRVATYGTSEYGLLGLGSSD----- 290

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFS---EDGHSS 387
                PF  + +  +  S+  V+ GW+H+A + S+G++LTWGWGGS G+ S    D  S+
Sbjct: 291 --PPSPFQPTLIPDV--SLEQVAAGWQHSAGVTSDGQLLTWGWGGSVGSESGLFPDQTSA 346

Query: 388 GGQLGHGNDVDYIHPTIVN 406
           GGQLGH N+ DY  PT  N
Sbjct: 347 GGQLGHDNEFDYWKPTPGN 365


>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/409 (37%), Positives = 224/409 (54%), Gaps = 26/409 (6%)

Query: 34  TLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--------ACGGAHTL 84
           +  R F AL  GNGD+GRLG G + +       S+   H ++ L        A GGAH++
Sbjct: 20  STSRAFTALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSI 79

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           FL   G V+A GLN++GQLG  ++  +  E   +  L  EVV+++ G +H+  + VDG +
Sbjct: 80  FLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVD-LDVEVVRVAAGNNHTLCVDVDGGV 138

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + +GKN  GQLG G       P   +   L G     A+ G E S+A++   +V SWG  
Sbjct: 139 WAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVAS-GAEHSLALSEDARVYSWGTS 197

Query: 205 GSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G LGHG E+   G+   T++    PRL++ L   KV+  AAG +HSAC+DE G ++ +
Sbjct: 198 ADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELFTW 257

Query: 263 GDRAVDKM--LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           G    +++    +  +H   P  +  L +  +V CGG HT   TS G + +WG+N++G L
Sbjct: 258 GQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAG-VVSWGANQHGEL 316

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGT 379
           G GS    +S  +   P    P+         +S GWKH+A +S +GK+  WG+GGS G+
Sbjct: 317 GHGS----NSDAKSAIP---KPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGGSVGS 369

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            S++  SSGGQLG GND DY  PT V    +  A+ VSCGFNHT AL+ 
Sbjct: 370 HSDEKLSSGGQLGLGNDFDYWEPTEVWLPGD--AVGVSCGFNHTLALVR 416


>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
 gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
          Length = 526

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 215/415 (51%), Gaps = 41/415 (9%)

Query: 44  GNGDYGRLGLGSLESRWRP---VVCSAFEKHS-------LKALACGGAHTLFLTETGCVY 93
           GNGD+GRLG G  + R R    +    F++ +       + + + GG+HT  +T  G VY
Sbjct: 121 GNGDFGRLGHGG-DGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTADGAVY 179

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNS 151
             GLN+ GQLG S + GY      +SGL +   VV +S G+HH+  +T  GEL+ WG+N 
Sbjct: 180 TCGLNEHGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRND 239

Query: 152 NGQLGLGKKAAKVIPIPTKVECLS-------GIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             Q GLG  A  V+P+P  +   S       G     AA G   ++AVT  G V +WG G
Sbjct: 240 ASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAA-GPRHNLAVTDRGAVYTWGDG 298

Query: 205 GSGRLGHG-QESSILGFL-RSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVY 260
             G LGHG  ES   GF  R T+E  PRL++ L  +G++V  AAAG  HS C+D  G V+
Sbjct: 299 KEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVH 358

Query: 261 IFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            +G    +++     N       P+ +  L    ++  GG     + + G + +WG+N N
Sbjct: 359 AWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGN 418

Query: 318 GCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
           G LG+G+ +      P  V  P +         S    S GW+H AA  S+G++ TWGW 
Sbjct: 419 GELGLGNSNDKRGDVPRLVHNPNA--------ASFASASAGWRHAAATSSDGRLWTWGWS 470

Query: 375 GSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           GS G    D  S+GGQLG  N   D+  PT+V  G   KA  VSCGFNHT A+LE
Sbjct: 471 GSVGQHGVDADSTGGQLGLRNGQSDFWEPTLV-VGLPGKAKAVSCGFNHTVAVLE 524



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 45/297 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC-------SAFEKH-SLKALACGGAHTLFLTETGCVYA 94
           WG  D  + GLGS      P+          A   H ++ ++A G  H L +T+ G VY 
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYT 294

Query: 95  TGLNDFGQLGISENIGY----------SLEPLRISGLKK---EVVQISTGYHHSSAITVD 141
            G    G LG   +  +             P  +  L     EV   + G  HS  +   
Sbjct: 295 WGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRT 354

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           G ++ WG+    QLG+G K A      PT+V  L  +  +  A G   +VAV   G ++S
Sbjct: 355 GHVHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRV--RDLAAGGNFNVAVGADGSMIS 412

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WGA G+G LG G  +   G +       PRL+          A+AG+ H+A    +GR++
Sbjct: 413 WGANGNGELGLGNSNDKRGDV-------PRLVHNPNAASFASASAGWRHAAATSSDGRLW 465

Query: 261 IFG------------DRAVDKMLFQEGNHA-RRPSLISKLP-YSEEVVCGGYHTCVL 303
            +G            D    ++  + G      P+L+  LP  ++ V CG  HT  +
Sbjct: 466 TWGWSGSVGQHGVDADSTGGQLGLRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAV 522



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 23/211 (10%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V+S G G  GRLGHG +      L  ++E   R+    +G+ V  A+AG  H+A +  +
Sbjct: 116 RVVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTAD 175

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
           G VY  G       L    +    P L  +S LP  + VV    G +HT  +T GGEL+ 
Sbjct: 176 GAVYTCGLNE-HGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWA 234

Query: 312 WGSNE-NGC-LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
           WG N+ + C LG G+  V+  P  +      +P +    +++ V+ G +H  A+++ G +
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNH--GAVMSVAAGPRHNLAVTDRGAV 292

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
            TWG          DG    G LGHG D  +
Sbjct: 293 YTWG----------DGKE--GVLGHGADESW 311


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 207/394 (52%), Gaps = 45/394 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    ++ P++  A +      ++CG  HT+ LT+ G VY  G  D G+
Sbjct: 6   WGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGR 65

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ K+V Q++ G +H++A+TV GELY WG    G+LG G + 
Sbjct: 66  LGHGDN-GWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEN 124

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P+ VE + G++ +Q A G   +V +     V +WG   +G  GHG  S      
Sbjct: 125 GH--STPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSG----- 177

Query: 222 RSTSEYTPRLIKELEGVKVK-IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y+P  + EL  + +K I+A GF H+A + ENG+V+ FG+    ++    G+++ R
Sbjct: 178 ---HQYSPYCVSELVEINIKQISACGF-HTAALSENGQVFTFGEGKFGRL----GHNSER 229

Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              ++K   +      ++V CGG+HT  +T  G ++TWG  E+G LG G       P RV
Sbjct: 230 NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRV 289

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                ES +D+   +I+ ++CGW HT A+++ G++ TWG  G H           G+LGH
Sbjct: 290 -----ESLIDK---NIIQLTCGWSHTVALTDKGEVFTWG-NGDH-----------GKLGH 329

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            +      P ++    + + + V+    HT AL+
Sbjct: 330 NDTNKVTEPKLIETFNSKRVISVASYNEHTVALV 363



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 178/344 (51%), Gaps = 41/344 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKN 150
           VY  G  + GQLG+ +       P+ +  L+ ++ VQIS G  H+  +T DG++Y WG+ 
Sbjct: 3   VYTWGRGEDGQLGLGDT-SDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRG 61

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            +G+LG G    K +P    VE L     +Q   G   + AVT  G++ +WG G  G+LG
Sbjct: 62  DDGRLGHGDNGWKFVP--RLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG E+            TP L++ ++G+ V+  A G  H+  + EN  VY +GD+  +  
Sbjct: 120 HGNENG---------HSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDK--ENG 168

Query: 271 LFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +   G+   H   P  +S+L     +++   G+HT  L+  G+++T+G  + G LG    
Sbjct: 169 VSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLG---- 224

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
              H+ ER Q P ++     I   I  V+CG  HTAA++E G + TWG GG HG      
Sbjct: 225 ---HNSERNQ-PVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWG-GGEHG------ 273

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                QLGHG+ V+ I PT V    +   +Q++CG++HT AL +
Sbjct: 274 -----QLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTD 312


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 205/397 (51%), Gaps = 45/397 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    + RPV   A  +  +  +ACG  HT+ LT+ G VY  G  D G+
Sbjct: 6   WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGR 65

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ K + Q++ G +H++A+TV G+LY WG    G+LG G + 
Sbjct: 66  LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P    VE L G+  +Q A G   +V +     V +WG   +G  GHG         
Sbjct: 125 GHSTPF--LVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177

Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y P  ++EL G   V+I+A GF H+A + E G V+ FG+    ++    G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKNIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229

Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              +++   +      ++V CGG+HT  +T  GE+YTWG  E+G LG G       P RV
Sbjct: 230 NQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                ES V+++   +V ++CGW HT A+++ G++ TWG  G H           G+LGH
Sbjct: 290 -----ESLVEKL---VVQITCGWSHTVALTDTGEVYTWG-NGDH-----------GKLGH 329

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
            +      P +V+  E  + + V+    HT AL++ V
Sbjct: 330 NDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVDPV 366



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 146/333 (43%), Gaps = 71/333 (21%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG+  +GQLGLG  + +  P+P  ++ L+     Q A G   +V +T  G+V +WG 
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG             ++ PRL++EL G  ++    G  H+A +  +G +Y +G
Sbjct: 61  GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                K+          P L+  L      +V CG  HT VL    ++YTWG  ENG  G
Sbjct: 112 GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171

Query: 322 IGS----------IDVLHSPERVQ----------------------GPF--------SES 341
            G           ++ L     VQ                      G F           
Sbjct: 172 HGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQ 231

Query: 342 PVDQICTSIV-----LVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           PV +   ++       V+CG  HTAA++E G++ TWG GG H           GQLGHG+
Sbjct: 232 PVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWG-GGEH-----------GQLGHGD 279

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            V+   PT V        +Q++CG++HT AL +
Sbjct: 280 KVNKTVPTRVESLVEKLVVQITCGWSHTVALTD 312


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 202/397 (50%), Gaps = 45/397 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    + RPV   A  +  +  +ACG  HT+ LTE G VY  G  D G+
Sbjct: 6   WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGR 65

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ K + Q++ G +H++A+TV G+LY WG    G+LG G + 
Sbjct: 66  LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  VE L  +  +Q A G   +V +     V +WG   +G  GHG         
Sbjct: 125 GH--STPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177

Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y P  ++EL G   V+I+A GF H+A + E G V+ FG+    ++    G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKSIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229

Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              +++   +      ++V CGG+HT  +T  GE+YTWG  E+G LG G       P RV
Sbjct: 230 NQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                ES ++++   ++ ++CGW HT  +++ G++ TWG  G H           G+LGH
Sbjct: 290 -----ESLLEKL---VLQITCGWSHTVTLTDTGEVYTWG-NGDH-----------GKLGH 329

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
            +      P  V+  +  + + V+    HT AL++ V
Sbjct: 330 NDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVDPV 366



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 146/333 (43%), Gaps = 71/333 (21%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG+  +GQLGLG  + +  P+P  ++ L+     Q A G   +V +T  G+V +WG 
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG             ++ PRL++EL G  ++    G  H+A +  +G +Y +G
Sbjct: 61  GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                K+          P L+  L   +  +V CG  HT VL    ++YTWG  ENG  G
Sbjct: 112 GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171

Query: 322 IGS----------IDVLHSPERVQ----------------------GPF--------SES 341
            G           ++ L     VQ                      G F           
Sbjct: 172 HGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQ 231

Query: 342 PVDQICTSIV-----LVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           PV +   ++       V+CG  HTAA++E G++ TWG GG H           GQLGHG+
Sbjct: 232 PVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWG-GGEH-----------GQLGHGD 279

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            V+   PT V        LQ++CG++HT  L +
Sbjct: 280 KVNKTVPTRVESLLEKLVLQITCGWSHTVTLTD 312


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 184/370 (49%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P+V SA +   + ++ CG  HT   +E T  VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFG 97

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   +    + P  I GLK  E+ QI+ G  H  AIT DGE++ WG+N NGQLGLG  
Sbjct: 98  RLGHGNSSDLFI-PRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGH- 155

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + + +P KV    GI  K  A G E + AVT  GK+  WG G  G LG G  +  L  
Sbjct: 156 -TEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRL-- 212

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +  + G K+ + A G+ H+  +  +G +Y FG     ++   +      
Sbjct: 213 -------VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLV 265

Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L     + V GG+ HT  L   GELY WG N+ G +G G+ D  +SP+ + G  
Sbjct: 266 PHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIV 325

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
           +E         +  V+CGW+HT AI++ G + +WG G S            GQLGHG+ V
Sbjct: 326 NE--------KVTRVTCGWRHTVAITDRGNVYSWGRGTS------------GQLGHGDAV 365

Query: 398 DYIHPTIVNF 407
           D   P  +  
Sbjct: 366 DRCVPKRIEL 375



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 37/371 (9%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
             CS   +  + +++ G +HT+ L     V + G  + GQLG  +     L PL IS L 
Sbjct: 6   AACSGGPRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALD 64

Query: 123 K-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
             E+  I+ G  H++A +     +Y WG    G+LG G  +   + IP  ++ L G+  K
Sbjct: 65  DCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSD--LFIPRAIKGLKGLEIK 122

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q A G    +A+TG G+V SWG   +G+LG G    +L          P  +   EG+ V
Sbjct: 123 QIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVL---------VPNKVAAFEGIAV 173

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGY 298
           K+ AAG  H+A + E+G++Y +G      +   + N    P  ++ +P  +   V CG  
Sbjct: 174 KMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWR 233

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           HT  + + G LYT+G ++ G LG G  +    P +VQ   +++        I  VS GW+
Sbjct: 234 HTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKT--------IQAVSGGWR 285

Query: 359 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HT A+ E G++  WGW            +  GQ+G GN  D+  P ++    N K  +V+
Sbjct: 286 HTVALDEDGELYGWGW------------NKFGQVGCGNTDDHNSPKLITGIVNEKVTRVT 333

Query: 418 CGFNHTGALLE 428
           CG+ HT A+ +
Sbjct: 334 CGWRHTVAITD 344



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 2/128 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E    P    A +  +++A++ G  HT+ L E G +Y  G N FGQ+G   
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGN 311

Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              ++   L    + ++V +++ G+ H+ AIT  G +Y WG+ ++GQLG G    +   +
Sbjct: 312 TDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC--V 369

Query: 168 PTKVECLS 175
           P ++E LS
Sbjct: 370 PKRIELLS 377


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 183/370 (49%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P + SA +   + ++ CG  HT  L+  T  VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFG 97

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   +    + P  I  LK  EV QI+ G  H  AIT DGE+  WG+N NGQLGLG  
Sbjct: 98  RLGHGNSSDLFI-PQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGH- 155

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +  P K+    G+  K  A G E + AVT  GK+  WG G  G LG G     L  
Sbjct: 156 -TEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRL-- 212

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +  + G  +K+ A G+ H+ C+ E+G +Y FG     ++   +      
Sbjct: 213 -------VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI 265

Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L   + + + GG+ HT  L S G LY WG N+ G +G G+ +   SP+ V+G  
Sbjct: 266 PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG-- 323

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                DQ+ T   +V CGW+HT A+++ G + +WG G S            GQLGHG+ V
Sbjct: 324 ---LQDQVVT---VVQCGWRHTLAMTDRGNVYSWGRGTS------------GQLGHGDTV 365

Query: 398 DYIHPTIVNF 407
           D   P  +  
Sbjct: 366 DRSTPKRIEI 375



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 169/364 (46%), Gaps = 37/364 (10%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQI 128
           +  + AL+ G +H++ L     V + G  + GQLG  +       P  +S L   E+  +
Sbjct: 13  RRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF-PTIVSALDDCEISSV 71

Query: 129 STGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           + G  H++A++   + +Y WG    G+LG G  +   IP P K   L G+  KQ A G  
Sbjct: 72  TCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKA--LKGLEVKQIACGDS 129

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
             +A+T  G+VL WG   +G+LG G    +L         TP  +   EGV VK+ AAG 
Sbjct: 130 HCLAITTDGEVLGWGRNQNGQLGLGHTEDVL---------TPHKLTAFEGVAVKMLAAGA 180

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS 305
            H+  + ENG++Y +G      +   +      P  ++ +     + V CG  HT  +  
Sbjct: 181 EHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAE 240

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-S 364
            G +YT+G ++ G LG G       P +VQ   S+         I  ++ GW+HT A+ S
Sbjct: 241 SGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKK--------IQAITGGWRHTFALDS 292

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +G++  WGW            +  GQ+G GN  D   P +V   ++     V CG+ HT 
Sbjct: 293 DGRLYGWGW------------NKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTL 340

Query: 425 ALLE 428
           A+ +
Sbjct: 341 AMTD 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 143/311 (45%), Gaps = 35/311 (11%)

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           G++++V+ +S G  HS A+     +  WG+  +GQLG G   A+    PT V  L     
Sbjct: 11  GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGD--AEERHFPTIVSALDDCEI 68

Query: 180 KQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
                G + + A++   K V SWG G  GRLGHG  S +         + P+ IK L+G+
Sbjct: 69  SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDL---------FIPQPIKALKGL 119

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCG 296
           +VK  A G  H   I  +G V  +G     ++          P  ++       + +  G
Sbjct: 120 EVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAG 179

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT  +T  G+LY WG    G LG+G  +    P++V     E         + +V+CG
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGE--------LMKMVACG 231

Query: 357 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
           W+HT  ++E G + T+GW            S  GQLGHG+  D++ P  V   ++ K   
Sbjct: 232 WRHTICVAESGNMYTFGW------------SKYGQLGHGDFADHLIPHQVQALKSKKIQA 279

Query: 416 VSCGFNHTGAL 426
           ++ G+ HT AL
Sbjct: 280 ITGGWRHTFAL 290



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G       P    A +   ++A+  G  HT  L   G +Y  G N FGQ+G   
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG- 310

Query: 108 NIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N      P  + GL+ +VV +   G+ H+ A+T  G +Y WG+ ++GQLG G    +   
Sbjct: 311 NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDR--S 368

Query: 167 IPTKVECLS 175
            P ++E LS
Sbjct: 369 TPKRIEILS 377


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 190/370 (51%), Gaps = 41/370 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT   +E+   VY+ G  DFG
Sbjct: 40  WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFG 99

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + GL+  + QI+ G  H  A+T+DGE+  WG+N NGQLGLG 
Sbjct: 100 RLGHGNSSDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT 157

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E + AVT  G++  WG G  G LG G  +  L 
Sbjct: 158 TEDSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL- 214

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  +EGVK+   A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 215 --------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL 266

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQG 336
            P  +  L  +   E+  G  HT  LTS G+LY WG N+ G +G+G  +V H SP +V+ 
Sbjct: 267 TPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKF 325

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P  +         +V +SCGW+HT A++E + + +WG G            + GQLGHG 
Sbjct: 326 PHEQ--------KVVHISCGWRHTLAVTERQNVFSWGRG------------TNGQLGHGE 365

Query: 396 DVDYIHPTIV 405
            +D   P ++
Sbjct: 366 SIDRNIPKMI 375



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 177/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P  +S L   EVV ++ G  H
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAED-RLSPTYLSALDGHEVVSVTCGADH 79

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +    ++Y WG    G+LG G  +    P P K   L G+  KQ A G    +AVT
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIK--ALHGLRIKQIACGDSHCLAVT 137

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV VK+ AAG  H+A +
Sbjct: 138 MDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSVKMVAAGAEHTAAV 188

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  +S +   +  +V CG  HT  ++S G LYT
Sbjct: 189 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYT 248

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G  +   +P +++    E+ + +I       S GW+HT A+ S+GK+  
Sbjct: 249 YGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEI-------SGGWRHTMALTSDGKLYG 300

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G G++VD+  P  V F    K + +SCG+ HT A+ E
Sbjct: 301 WGW------------NKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTE 346



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E    P    A +++ +  ++ G  HT+ LT  G +Y  G N FGQ+G+ +
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 313

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N+ +   P+++    +++VV IS G+ H+ A+T    ++ WG+ +NGQLG G+   +   
Sbjct: 314 NVDH-CSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDR--N 370

Query: 167 IPTKVECLS 175
           IP  +E LS
Sbjct: 371 IPKMIEVLS 379


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 188/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+  ++ ++ CG  HT   +E    VY+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96

Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +L  G S ++ ++ +P++ + GLK  + QI+ G  H  A+T+ GE+  WG+N NGQLGLG
Sbjct: 97  RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG 153

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +  +P K++    +  K  A G E + AVT  G +  WG G  G LG G  +  L
Sbjct: 154 TTEDSL--LPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 211

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P  +  +EG K+ + A G+ H+  + ++G +Y +G     ++   +    
Sbjct: 212 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262

Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+ D   SP +V  
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P  +         I  V+CGW+HT A+SE K + +WG G S            GQLG+G 
Sbjct: 323 PEDQ--------KISQVACGWRHTLALSEKKNVFSWGRGTS------------GQLGNGE 362

Query: 396 DVDYIHPTIVN 406
            VD   P +++
Sbjct: 363 IVDRNTPVLID 373



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 178/359 (49%), Gaps = 39/359 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG     +  +  G  H
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-AEDRLVPTVLSGFDAPAITSVICGADH 76

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G  +    P P  V+ L G+  KQ A G    +AVT
Sbjct: 77  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGLKIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+V SWG   +G+LG G  E S+L          P+ I+  E V VK+ AAG  H+A 
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFESVCVKMIAAGAEHTAA 184

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++  G LY
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 244

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
           T+G ++ G LG G  +    P +V+    +S + QI       S GW+HT A+ SEGK+ 
Sbjct: 245 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQI-------SGGWRHTMALTSEGKLY 296

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            WGW            +  GQ+G GN+ D+  P  V+F E+ K  QV+CG+ HT AL E
Sbjct: 297 GWGW------------NKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSE 343


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 188/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT   +E    VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFG 97

Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +L  G S ++ ++ +P++ + GLK  + QI+ G  H  A+T+ G++  WG+N NGQLGLG
Sbjct: 98  RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG 154

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +  +P K++   G+  K  A G E + AVT  G +  WG G  G LG G  +  L
Sbjct: 155 TTEDSL--LPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 212

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P  +  +EG K+ + A G+ H+  + ++G +Y +G     ++   +    
Sbjct: 213 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 263

Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+ D   SP +V  
Sbjct: 264 LVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHF 323

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P  +         I  V+CGW+HT A+SE K + +WG G S            GQLG+G 
Sbjct: 324 PEDQ--------KISQVACGWRHTLALSEKKNVFSWGRGTS------------GQLGNGE 363

Query: 396 DVDYIHPTIVN 406
            VD   P +++
Sbjct: 364 IVDRNTPVLID 374



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 179/359 (49%), Gaps = 39/359 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG     +  +  G  H
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-AEDRLVPTVLSGFDAPGITSVICGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G  +    P P  V+ L G+  KQ A G    +AVT
Sbjct: 78  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGLKIKQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+V SWG   +G+LG G  E S+L          P+ I+  EGV VK+ AAG  H+A 
Sbjct: 136 MAGQVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGVCVKMIAAGAEHTAA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++  G LY
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 245

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
           T+G ++ G LG G  +    P +++    +S + QI       S GW+HT A+ SEGK+ 
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSTISQI-------SGGWRHTMALTSEGKLY 297

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            WGW            +  GQ+G GN+ D+  P  V+F E+ K  QV+CG+ HT AL E
Sbjct: 298 GWGW------------NKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSE 344



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 26/265 (9%)

Query: 19  KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
           K+ +  G+C + I++  +   A         WG G YG LGLG    R  P   S+ E  
Sbjct: 164 KIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 223

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
            +  +ACG  HT+ ++++G +Y  G + +GQLG  +   + L P ++  LK   + QIS 
Sbjct: 224 KMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSTISQISG 282

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+ H+ A+T +G+LY WG N  GQ+G+G       P+  +V         Q A G+  ++
Sbjct: 283 GWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPV--QVHFPEDQKISQVACGWRHTL 340

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVK----IAA 244
           A++    V SWG G SG+LG+G+              TP LI  L  +G   K      A
Sbjct: 341 ALSEKKNVFSWGRGTSGQLGNGE---------IVDRNTPVLIDALSTDGSGCKKLESSTA 391

Query: 245 AGFLHSACIDENGRVYIFGDRAVDK 269
           A F     +  + R  I  D  V K
Sbjct: 392 APFAAKVWVSPSERYAIVPDENVPK 416


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 177/368 (48%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 326

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  V
Sbjct: 327 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESV 366

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 367 DRNFPKII 374



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 176/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++   S S + QI       S GW+HT A+ S+GK+  
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQI-------SGGWRHTMALTSDGKLYG 299

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 300 WGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 177/368 (48%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 40  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 99

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 100 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 158

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 159 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 210

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 211 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 267

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 268 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 327

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  V
Sbjct: 328 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESV 367

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 368 DRNFPKII 375



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 176/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 79

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 137

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 188

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 189 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 248

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++   S S + QI       S GW+HT A+ S+GK+  
Sbjct: 249 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQI-------SGGWRHTMALTSDGKLYG 300

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 301 WGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 346


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 177/368 (48%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 158 EDSL--VPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 326

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  V
Sbjct: 327 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESV 366

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 367 DRNFPKII 374



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 175/358 (48%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+ +K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIPIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++   S S + QI       S GW+HT A+ S+GK+  
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQI-------SGGWRHTMALTSDGKLYG 299

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 300 WGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 177/368 (48%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 28  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 88  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 256 PHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 315

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  V
Sbjct: 316 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESV 355

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 356 DRNFPKII 363



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 176/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 67

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 125

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 176

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++   S S + QI       S G++HT A+ S+GK+  
Sbjct: 237 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQI-------SGGFRHTMALTSDGKLYG 288

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 289 WGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 334



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 141/308 (45%), Gaps = 35/308 (11%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           ++V+ IS G  HS A+     +  WG+  +GQLG G   A+  P PT++  L G      
Sbjct: 4   RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQIVSV 61

Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             G + +VA +  G +V SWG G  GRLGHG  S +         +TP  IK L G+++K
Sbjct: 62  TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRIK 112

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
             A G  H   +   G V  +G     ++   +   +  P  I        + V  G  H
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           T  +T  G+LY WG    G LG+G       PERV     E         + +V+CGW+H
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE--------KMSMVACGWRH 224

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           T ++S  G + T+GW            S  GQLGHG+  D++ P  +    N    Q+S 
Sbjct: 225 TISVSYSGALYTYGW------------SKYGQLGHGDLEDHLIPHKLEALSNSFISQISG 272

Query: 419 GFNHTGAL 426
           GF HT AL
Sbjct: 273 GFRHTMAL 280


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 177/368 (48%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 28  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 88  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 256 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 315

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  V
Sbjct: 316 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESV 355

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 356 DRNFPKII 363



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 176/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 67

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 125

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 176

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++   S S + QI       S GW+HT A+ S+GK+  
Sbjct: 237 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQI-------SGGWRHTMALTSDGKLYG 288

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 289 WGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 334


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 178/368 (48%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G  +  L  
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 326

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  V
Sbjct: 327 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESV 366

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 367 DRNFPKII 374



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 177/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++   S S + QI       S GW+HT A+ S+GK+  
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQI-------SGGWRHTMALTSDGKLYG 299

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 300 WGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 185/374 (49%), Gaps = 39/374 (10%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVY 93
           L    A  WG G+ G+LG G  E R +P       + S  A+  G  +++ L++    VY
Sbjct: 30  LSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVY 89

Query: 94  ATGLNDFGQLGISE-NIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           + G  DFG+LG  + N  +  +P+R ++G  + +V+++ G  H+ A+T  GEL+ +G+N 
Sbjct: 90  SWGWGDFGRLGHGDCNDVFIPQPIRALAG--RNIVKVACGDTHTLAVTDTGELFSFGRNQ 147

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           NGQLGLG  +  ++P P  VE L G      A G E S+A T  G V +WG G  G LG 
Sbjct: 148 NGQLGLGTTSDAILPQP--VESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGV 205

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G              + P  +  LEGVKV   A G+ HS   DE G VY FG     ++ 
Sbjct: 206 GPPED---------RHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLG 256

Query: 272 FQEGNHARRPSLISKLPYSEEV-VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             +      P  +  L  S  V + GG+ HT      G+LY+WG N+ G LGIGS    +
Sbjct: 257 HGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSN 316

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
           +P  VQG  + SPV        L+SCGW+HT A++E G + +WG G              
Sbjct: 317 APVPVQG-LNTSPVK-------LLSCGWRHTFAVTEAGDVFSWGRG------------VN 356

Query: 389 GQLGHGNDVDYIHP 402
           GQLGH    D   P
Sbjct: 357 GQLGHNEPKDTNAP 370



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 15/295 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G     + P    A    ++  +ACG  HTL +T+TG +++ G N  GQ
Sbjct: 91  WGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQ 150

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+      ++ P  +  L+ +EV  I+ G  HS A T  G+++ WG    G LG+G   
Sbjct: 151 LGLG-TTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPE 209

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +   +P++V  L G+     A G+  S+A    G V ++G    G+LGHG         
Sbjct: 210 DRH--LPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGD-------- 259

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               +  P+ ++ L+  ++ + A G+ H++  D++G++Y +G     ++       +  P
Sbjct: 260 -CIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAP 318

Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +  L  S  + + CG  HT  +T  G++++WG   NG LG       ++P R+
Sbjct: 319 VPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRL 373



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 138/306 (45%), Gaps = 35/306 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            V  +S G  HS A+  +G    WG+  +GQLG G   A+    P  +  L         
Sbjct: 15  RVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD--AEERKKPRAIFHLMQASCSAVC 72

Query: 184 LGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            G E SVA++    +V SWG G  GRLGHG  + +         + P+ I+ L G  +  
Sbjct: 73  SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDV---------FIPQPIRALAGRNIVK 123

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
            A G  H+  + + G ++ FG     ++     + A  P  +  L   E   + CGG H+
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHS 183

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
              TS G+++ WG    G LG+G  +  H P +V G             +  V+CGW+H+
Sbjct: 184 LAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEG--------VKVTSVACGWRHS 235

Query: 361 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A  E G + T+GW            S  GQLGHG+ +D + P  V   ++ + + ++ G
Sbjct: 236 IAADETGAVYTFGW------------SKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGG 283

Query: 420 FNHTGA 425
           + HT A
Sbjct: 284 WRHTSA 289


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 198/390 (50%), Gaps = 58/390 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ CG  HTL  +E+   VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFG 98

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   +  +P+R + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 99  RLGHGNSSDLFIPQPIRALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 156

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 157 TEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND--- 211

Query: 220 FLRSTSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                     R I E   V   K+ + A G+ H+  +  +G +Y +G     ++   +  
Sbjct: 212 ----------RCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCK 261

Query: 277 HARRPSLISKLPYSEEVVC---GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
               P  +    +S++++C   GG+ HT  LT+GG+LY WG N+ G +G+G      SP 
Sbjct: 262 DHLVPHKLQA--FSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPV 319

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
           +V+ P  +         +  +SCGW+HT A++E   + +WG G            + GQL
Sbjct: 320 QVKFPHDQ--------KVAQISCGWRHTIAVTEKDNVYSWGRG------------TNGQL 359

Query: 392 GHGNDVDYIHPTIVNFGENVKALQV--SCG 419
           G G+ +D+ +P I      ++AL V  SCG
Sbjct: 360 GIGDTIDWNYPKI------IEALSVDGSCG 383



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 174/357 (48%), Gaps = 36/357 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ GG+H++ L     V + G  + GQLG  +     L P ++S L  +++V +  G  H
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDT-DDRLLPTQLSALDAQQIVSVVCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    E+Y WG    G+LG G  +   IP P  +  L G+  KQ A G    +AVT
Sbjct: 79  TLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQP--IRALQGLRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  HS  I
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQTFQGVPIKMVAAGAEHSVAI 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSEEVVCGGYHTCVLTSGGELYTW 312
            ENG +Y +G      +   + N    P  +S        V CG  HT  ++S GELYT+
Sbjct: 188 TENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTY 247

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG-KILTW 371
           G ++ G LG G       P ++Q  FS+  + Q       VS GW+HT A++ G ++  W
Sbjct: 248 GWSKYGQLGHGDCKDHLVPHKLQA-FSDKLICQ-------VSGGWRHTMALTTGGQLYGW 299

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           GW            +  GQ+G G++VD   P  V F  + K  Q+SCG+ HT A+ E
Sbjct: 300 GW------------NKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTE 344


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 174/368 (47%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 30  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFG 89

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T +GE+  WG+N NGQLGLG  
Sbjct: 90  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDT 148

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 149 EDSL--VPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 200

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K    A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 201 ---TDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 257

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 258 PHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 317

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  V
Sbjct: 318 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESV 357

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 358 DRNFPKII 365



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 174/358 (48%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 69

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 127

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K  AAG  H+A +
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKXVAAGAEHTAAV 178

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYT 238

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++   S S + QI       S G +HT A+ S+GK+  
Sbjct: 239 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQI-------SGGARHTXALTSDGKLYG 290

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 291 WGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 336


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 177/368 (48%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +E+   VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLGHG-NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G  +  L  
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLV 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPD 326

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V VSCGW+HT A++E   +  WG G            + GQLG G  +
Sbjct: 327 DQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESL 366

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 367 DRNFPKII 374



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 175/358 (48%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G ++    P +++     S + QI       S GW+HT A+ S+GK+  
Sbjct: 248 YGWSKYGQLGHGDLEDHLVPHKLEA-LGNSVISQI-------SGGWRHTMALTSDGKLYG 299

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G GN++D   P  V   ++ K +QVSCG+ HT A+ E
Sbjct: 300 WGW------------NKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTE 345



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G++G+G+   +  PV     +   +  ++CG  HTL +TE   V+A G    GQ
Sbjct: 300 WGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 359

Query: 103 LGISENIGYS----LEPLRISGLKKEVVQIST 130
           LGI E++  +    +E L + G   + ++ S 
Sbjct: 360 LGIGESLDRNFPKIIEALSVDGASGQHIESSN 391


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 191/371 (51%), Gaps = 43/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ACG  HTL  +E+   +Y+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFG 97

Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +L  G S ++      + + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGN 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 156 TEDSL--VPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 209

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGN 276
                  + P  +  ++  K+ + A G+ H+  +  +G +Y +G     ++    F++  
Sbjct: 210 -----DRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSL 264

Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             ++   +S    S+  V GG+ H+  LTS G L+ WG N+ G +G+G  D L     VQ
Sbjct: 265 VPQKLQALSDKLISQ--VSGGWRHSMALTSTGLLFGWGWNKFGQVGVG--DNLDHCSPVQ 320

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHG 394
             F   P DQ    +V +SCGW+HT A++E + + +WG G            + GQLGHG
Sbjct: 321 VKF---PQDQ---RVVQISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHG 362

Query: 395 NDVDYIHPTIV 405
           + +D   P I+
Sbjct: 363 DTIDRNSPKII 373



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 179/358 (50%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P ++S L  + +  I+ G  H
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL-PTQLSALDAQHIDSIACGADH 77

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ELY WG    G+LG G  +  +IP P  +  L G+  KQ A G    +AVT
Sbjct: 78  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  HS  I
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFKGVPIKMVAAGAEHSVAI 186

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            ENG +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G +YT
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G+ +    P+++Q   S+  + Q       VS GW+H+ A+ S G +  
Sbjct: 247 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQ-------VSGGWRHSMALTSTGLLFG 298

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G G+++D+  P  V F ++ + +Q+SCG+ HT A+ E
Sbjct: 299 WGW------------NKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTE 344



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 142/298 (47%), Gaps = 19/298 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+      P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 91  WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 150

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  N   SL P +I   K   ++ ++ G  HS AIT +GELY WG    G LGLG + 
Sbjct: 151 LGLG-NTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN 209

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF 220
            +    P KV  +        A G+  +++V+  G + ++G    G+LGHG  E S++  
Sbjct: 210 DRW--NPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLV-- 265

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P+ ++ L    +   + G+ HS  +   G ++ +G     ++   +      
Sbjct: 266 --------PQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS 317

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           P  + K P  + VV   CG  HT  +T    +++WG   NG LG G     +SP+ ++
Sbjct: 318 PVQV-KFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIE 374


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 180/370 (48%), Gaps = 39/370 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT   +E    VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + G+K  + Q++ G  H  A+T+ GE+  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P  ++   GI  K  A G E + AVT  G +  WG G  G LG G  +    
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  + P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264

Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   S   + GG+ HT  LTS G+LY WG N+ G +G G      SP +V  P
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP 324

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
             +         +  V+CGW+HT A +E K +  WG G S            GQLGHG  
Sbjct: 325 EEQ--------KVAQVACGWRHTLAFTEKKNVFAWGRGTS------------GQLGHGEI 364

Query: 397 VDYIHPTIVN 406
           VD   P I++
Sbjct: 365 VDRNTPVIID 374



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 176/359 (49%), Gaps = 39/359 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     +   G  + GQLG  +     L P  ISG     +  +  G  H
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAED-RLVPTVISGFDAPGITSVICGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G       P P  V+ L GI  KQ A G    +AVT
Sbjct: 78  TTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQP--VKALQGIKIKQLACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+VLSWG   +G+LG G  E S+L          P+ I+  EG+ VK+ AAG  H+A 
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
           T+G ++ G LG G  +    P +V+    +S   QI       S GW+HT A+ S+GK+ 
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQI-------SGGWRHTMALTSDGKLY 297

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            WGW            +  GQ+G G++ D+  P  VNF E  K  QV+CG+ HT A  E
Sbjct: 298 GWGW------------NKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTE 344



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 17/304 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +K LACG +H L +T  G V + G N  GQ
Sbjct: 91  WGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+      SL P  I   +   V  I+ G  H++A+T DG++Y WG    G LGLG + 
Sbjct: 151 LGLG-TTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN 209

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +   +P KV  + G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 210 DRF--VPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 264

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+       + G+ H+  +  +G++Y +G     ++   +      P
Sbjct: 265 ------VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSP 318

Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           + ++  P  +   +V CG  HT   T    ++ WG   +G LG G I   ++P  +    
Sbjct: 319 AQVN-FPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377

Query: 339 SESP 342
            + P
Sbjct: 378 PDGP 381


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 189/371 (50%), Gaps = 43/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ACG  HTL  +E+   +Y+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96

Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +L  G S ++      + + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 97  RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 155 SEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 208

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGN 276
                  + P  +  ++  K+ + A G+ H+  +   G +Y +G     ++    F++  
Sbjct: 209 -----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263

Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             ++   +S    S+  V GG+ H+  LTS G LY WG N+ G +G+G      SP +V+
Sbjct: 264 VPQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVK 321

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            P  +         +V +SCGW+HT A++E + + +WG G            + GQLGHG
Sbjct: 322 FPHDQ--------KVVQISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHG 361

Query: 395 NDVDYIHPTIV 405
           + VD   P I+
Sbjct: 362 DTVDRNSPKII 372



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 177/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  +S L  +++  I+ G  H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ELY WG    G+LG G  +  +IP P  +  L G+  KQ A G    +AVT
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G          S     P+ I+  +GV +K+ AAG  HS  I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            ENG +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G+ +    P+++Q   S+  + Q       VS GW+H+ A+ S G +  
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQ-------VSGGWRHSMALTSTGLLYG 297

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G G++VD   P  V F  + K +Q+SCG+ HT A+ E
Sbjct: 298 WGW------------NKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTE 343



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 25/301 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+      P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 90  WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149

Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+  SE+   SL P +I   +   ++ ++ G  HS AIT +GELY WG    G LGLG 
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
           +  +   IP KV  +        A G+  +++V+  G + ++G    G+LGHG  E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P+ ++ L    +   + G+ HS  +   G +Y +G     ++    G++ 
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312

Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            R S +  K P+ ++VV   CG  HT  +T    +++WG   NG LG G     +SP+ +
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372

Query: 335 Q 335
           +
Sbjct: 373 E 373


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 189/371 (50%), Gaps = 43/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ACG  HTL  +E+   +Y+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96

Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +L  G S ++      + + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 97  RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 155 SEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 208

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGN 276
                  + P  +  ++  K+ + A G+ H+  +   G +Y +G     ++    F++  
Sbjct: 209 -----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263

Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             ++   +S    S+  V GG+ H+  LTS G LY WG N+ G +G+G      SP +V+
Sbjct: 264 VPQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVK 321

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            P  +         +V +SCGW+HT A++E + + +WG G            + GQLGHG
Sbjct: 322 FPHDQ--------KVVQISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHG 361

Query: 395 NDVDYIHPTIV 405
           + VD   P I+
Sbjct: 362 DTVDRNSPKII 372



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 177/358 (49%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  +S L  +++  I+ G  H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ELY WG    G+LG G  +  +IP P  +  L G+  KQ A G    +AVT
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G          S     P+ I+  +GV +K+ AAG  HS  I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            ENG +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G+ +    P+++Q   S+  + Q       VS GW+H+ A+ S G +  
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQ-------VSGGWRHSMALTSTGLLYG 297

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G G++VD   P  V F  + K +Q+SCG+ HT A+ E
Sbjct: 298 WGW------------NKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTE 343



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 25/301 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+      P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 90  WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149

Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+  SE+   SL P +I   +   ++ ++ G  HS AIT +GELY WG    G LGLG 
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
           +  +   IP KV  +        A G+  +++V+  G + ++G    G+LGHG  E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P+ ++ L    +   + G+ HS  +   G +Y +G     ++    G++ 
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312

Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            R S +  K P+ ++VV   CG  HT  +T    +++WG   NG LG G     +SP+ +
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372

Query: 335 Q 335
           +
Sbjct: 373 E 373


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 181/368 (49%), Gaps = 35/368 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   S  +   + ++ CG  HT   +E+   VY+ G  DFG
Sbjct: 42  WGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFG 101

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      P  I  L   ++ QI+ G  H  A+T+DGE+  WG+N NGQLGLG  
Sbjct: 102 RLG-HGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTT 160

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              ++P   K++   G+  K  A G E + AVT  G++  WG G  G LG G  +  L  
Sbjct: 161 EDSLVP--QKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL-- 216

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +  + G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 217 -------VPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLT 269

Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++ GG+ HT  LTS G LY WG N+ G +G+G      SP +V+ P 
Sbjct: 270 PHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPH 329

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            ++       S+V +SCGW+HT AI+E + + +WG G            + GQLGHG  +
Sbjct: 330 EQA------HSLVQISCGWRHTLAITERQNVFSWGRG------------TNGQLGHGESM 371

Query: 398 DYIHPTIV 405
           D   P I+
Sbjct: 372 DRNLPKII 379



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 175/360 (48%), Gaps = 39/360 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   +++ I+ G  H
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT-PTQLSTLDGLDIISITCGADH 81

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           +++ +    E+Y WG    G+LG G  +    P P K   L  +  +Q A G    +AVT
Sbjct: 82  TTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIK--ALHSLKIRQIACGDSHCLAVT 139

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  H+A +
Sbjct: 140 MDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSIKMVAAGAEHTAAV 190

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  +S +   +   V CG  HT  ++S G LYT
Sbjct: 191 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYT 250

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G  +   +P +V+            + I ++S GW+HT A+ S+G +  
Sbjct: 251 YGWSKYGQLGHGDFEDHLTPHKVEALRD--------SYISMISGGWRHTMALTSDGNLYG 302

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKAL-QVSCGFNHTGALLE 428
           WGW            +  GQ+G G+++D+  P  V F  E   +L Q+SCG+ HT A+ E
Sbjct: 303 WGW------------NKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITE 350



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 61/245 (24%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ E    P    AF+  S+K +A G  HT  +TE G +Y  G   +G 
Sbjct: 147 WGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGN 206

Query: 103 LGISE--------------------------------------NIGYS------------ 112
           LG+ +                                        G+S            
Sbjct: 207 LGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFED 266

Query: 113 -LEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            L P ++  L+   +  IS G+ H+ A+T DG LY WG N  GQ+G+G       P+  K
Sbjct: 267 HLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVK 326

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                     Q + G+  ++A+T    V SWG G +G+LGHG+         S     P+
Sbjct: 327 FPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGE---------SMDRNLPK 377

Query: 231 LIKEL 235
           +I+ L
Sbjct: 378 IIEVL 382



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 13/95 (13%)

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGH 393
           +G  S S V      ++L+S G  H+ A+  G I+ +WG G       EDG     QLGH
Sbjct: 5   EGAASGSEVSGPIRQVILISAGASHSVALLSGNIVCSWGRG-------EDG-----QLGH 52

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G+  D   PT ++  + +  + ++CG +HT +  E
Sbjct: 53  GDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSE 87


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 188/383 (49%), Gaps = 43/383 (11%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           ++ L  +    WG G+ G+LG G  E R  P V ++F+   + ++ CG  HT+  ++   
Sbjct: 34  AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93

Query: 92  -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
            +Y+ G  DFG+LG   N      P  I  L+  ++ QI+ G  H   +T +G+++ WG+
Sbjct: 94  QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N NGQLGLG     +  +P K++   G+  K  A G E + A+T GG +  WG G  G  
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
                   LG         P  +  +EG K+ + A G+ HS  +  +G +Y +G     +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261

Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSI 325
           +    FQ+    R+   +  +P S+  + GG+ HT  +   G+LY WG N+ G +G+   
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED- 318

Query: 326 DVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSED 383
           +V H SP  V  P  +         IV V+CGW+HT A++E K I +WG G S       
Sbjct: 319 NVDHCSPVEVNFPDEQ--------KIVQVACGWRHTLALTENKNIFSWGRGAS------- 363

Query: 384 GHSSGGQLGHGNDVDYIHPTIVN 406
                GQLGHG  +D   P +++
Sbjct: 364 -----GQLGHGEIIDRNTPKMID 381



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 171/363 (47%), Gaps = 35/363 (9%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G  H+  L     V + G  + GQLG  ++    +  +  S     V  + 
Sbjct: 20  EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI 79

Query: 130 TGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            G  H+ A + D  +LY WG    G+LG G  +    P P  +  L G+  KQ A G   
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQP--IVALQGMKIKQIACGDSH 137

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
            + VT  G+V SWG   +G+LG G     L          P+ IK  EGV VK+ AAG  
Sbjct: 138 CLTVTFNGQVHSWGRNQNGQLGLGNNQDSL---------LPQKIKAFEGVCVKMIAAGAE 188

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSG 306
           H+  I E G +Y +G      +   + +    P  +S +   + V+  CG  H+  ++S 
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSS 248

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           G LYT+G ++ G LG G       P +++    + P+ QI       S GW+HT A++E 
Sbjct: 249 GALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQI-------SGGWRHTMAVAED 300

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           GK+  WGW            +  GQ+G  ++VD+  P  VNF +  K +QV+CG+ HT A
Sbjct: 301 GKLYGWGW------------NKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLA 348

Query: 426 LLE 428
           L E
Sbjct: 349 LTE 351



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ +    P    AFE   +K +A G  HT  +TE G +Y  G   +G 
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+S+    S+ P ++S ++ E +V ++ G+ HS +++  G LY +G +  GQLG G   
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  +P K+E L  +   Q + G+  ++AV   GK+  WG    G+         +G  
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    +P  +   +  K+   A G+ H+  + EN  ++ +G  A  ++   E      P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 282 SLISKL 287
            +I  L
Sbjct: 378 KMIDAL 383



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  +    P    A +   +  ++ G  HT+ + E G +Y  G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N+ +   P+ ++   ++++VQ++ G+ H+ A+T +  ++ WG+ ++GQLG G+   +  P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 167 IPTKVECLSGIFTKQ 181
                  L G   KQ
Sbjct: 378 KMIDALSLDGSACKQ 392


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 188/383 (49%), Gaps = 43/383 (11%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           ++ L  +    WG G+ G+LG G  E R  P V ++F+   + ++ CG  HT+  ++   
Sbjct: 34  AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93

Query: 92  -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
            +Y+ G  DFG+LG   N      P  I  L+  ++ QI+ G  H   +T +G+++ WG+
Sbjct: 94  QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N NGQLGLG     +  +P K++   G+  K  A G E + A+T GG +  WG G  G  
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
                   LG         P  +  +EG K+ + A G+ HS  +  +G +Y +G     +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261

Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSI 325
           +    FQ+    R+   +  +P S+  + GG+ HT  +   G+LY WG N+ G +G+   
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED- 318

Query: 326 DVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSED 383
           +V H SP  V  P  +         IV V+CGW+HT A++E K I +WG G S       
Sbjct: 319 NVDHCSPVEVNFPDEQ--------KIVQVACGWRHTLALTENKNIFSWGRGAS------- 363

Query: 384 GHSSGGQLGHGNDVDYIHPTIVN 406
                GQLGHG  +D   P +++
Sbjct: 364 -----GQLGHGEIIDRNTPKMID 381



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 171/363 (47%), Gaps = 35/363 (9%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G  H+  L     V + G  + GQLG  ++    +  +  S     V  + 
Sbjct: 20  EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI 79

Query: 130 TGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            G  H+ A + D  +LY WG    G+LG G  +    P P  +  L G+  KQ A G   
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQP--IVALQGMKIKQIACGDSH 137

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
            + VT  G+V SWG   +G+LG G     L          P+ IK  EGV VK+ AAG  
Sbjct: 138 CLTVTFNGQVHSWGRNQNGQLGLGNNQDSL---------LPQKIKAFEGVCVKMIAAGAE 188

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSG 306
           H+  I E G +Y +G      +   + +    P  +S +   + V+  CG  H+  ++S 
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSS 248

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           G LYT+G ++ G LG G       P +++    + P+ QI       S GW+HT A++E 
Sbjct: 249 GALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQI-------SGGWRHTMAVAED 300

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           GK+  WGW            +  GQ+G  ++VD+  P  VNF +  K +QV+CG+ HT A
Sbjct: 301 GKLYGWGW------------NKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLA 348

Query: 426 LLE 428
           L E
Sbjct: 349 LTE 351



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ +    P    AFE   +K +A G  HT  +TE G +Y  G   +G 
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+S+    S+ P ++S ++ E +V ++ G+ HS +++  G LY +G +  GQLG G   
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  +P K+E L  +   Q + G+  ++AV   GK+  WG    G+         +G  
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    +P  +   +  K+   A G+ H+  + EN  ++ +G  A  ++   E      P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 282 SLISKL 287
            +I  L
Sbjct: 378 KMIDAL 383



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  +    P    A +   +  ++ G  HT+ + E G +Y  G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N+ +   P+ ++   ++++VQ++ G+ H+ A+T +  ++ WG+ ++GQLG G+   +  P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 167 IPTKVECLSGIFTKQ 181
                  L G   KQ
Sbjct: 378 KMIDALSLDGSACKQ 392


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 182/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT  +  E   VY+ G  DFG
Sbjct: 45  WGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFG 104

Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +L  G S ++ ++ +P+R + G+K  + Q++ G  H  A+T+ GE+  WG+N NGQLGLG
Sbjct: 105 RLGHGNSSDV-FTPQPVRALQGIK--IKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLG 161

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G  +   
Sbjct: 162 TTEDSL--LPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN--- 216

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   + P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +    
Sbjct: 217 ------DRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH 270

Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G G      SP +V  
Sbjct: 271 LFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMF 330

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P  +         +  V+CGW+HT A +E K +  WG G S            GQLGHG 
Sbjct: 331 PAEQ--------KVAQVACGWRHTLAYTEKKNVFAWGRGTS------------GQLGHGE 370

Query: 396 DVDYIHPTIVN 406
            VD   P +++
Sbjct: 371 IVDRNKPLMID 381



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 176/359 (49%), Gaps = 39/359 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L E   + + G  + GQLG  +     L P  ISG     +  +  G  H
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAED-RLVPTVISGFDAPRITSVICGADH 84

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + +  ++Y WG    G+LG G  +    P P  V  L GI  KQ A G    +AVT
Sbjct: 85  TTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQP--VRALQGIKIKQMACGDSHCLAVT 142

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
            GG+V SWG   +G+LG G  E S+L          P+ I+  EG+ VK+ AAG  H+A 
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGICVKMIAAGAEHTAA 192

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LY
Sbjct: 193 VTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILY 252

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
           T+G ++ G LG G  +    P +V+    +S   QI       S GW+HT A+ S+GK+ 
Sbjct: 253 TYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTSQI-------SGGWRHTMALTSDGKLY 304

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            WGW            +  GQ+G G+ VD+  P  V F    K  QV+CG+ HT A  E
Sbjct: 305 GWGW------------NKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTE 351



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 11/203 (5%)

Query: 19  KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
           K+ +  GIC + I++  +   A         WG G YG LGLG    R+ P   S  E  
Sbjct: 171 KIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGE 230

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
            +  +ACG  HT+ ++ +G +Y  G + +GQLG  +   + L P ++  LK     QIS 
Sbjct: 231 KMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH-LFPHKVEALKDSSTSQISG 289

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+ H+ A+T DG+LY WG N  GQ+G G       P+         +   Q A G+  ++
Sbjct: 290 GWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKV--AQVACGWRHTL 347

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
           A T    V +WG G SG+LGHG+
Sbjct: 348 AYTEKKNVFAWGRGTSGQLGHGE 370



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E    P    A +  S   ++ G  HT+ LT  G +Y  G N FGQ+G  +
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318

Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
           ++ +      +   +++V Q++ G+ H+ A T    ++ WG+ ++GQLG G+   +  P+
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPL 378

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
                   G  +K+     E S AV    KV
Sbjct: 379 MIDAISPDGSGSKK----LESSTAVPFTAKV 405



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 13/80 (16%)

Query: 350 IVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           +VLVS G  H+ A+ EG +L +WG G       ED     GQLGHG+  D + PT+++  
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRG-------ED-----GQLGHGDAEDRLVPTVISGF 70

Query: 409 ENVKALQVSCGFNHTGALLE 428
           +  +   V CG +HT A  E
Sbjct: 71  DAPRITSVICGADHTTAYSE 90


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 184/372 (49%), Gaps = 41/372 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTET-GCVYATGLND 99
           WG G+ G+LG G  E R  P V S F+  +  + ++ CG  HT   +E    VY+ G  D
Sbjct: 46  WGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGD 105

Query: 100 FGQLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           FG+LG   +   ++ +P++ + G+K  + QI+ G  H  A+T+ GE+  WG+N NGQLGL
Sbjct: 106 FGRLGHGNSSDVFTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGL 163

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G     ++P   K++   G+  K  A G E + AVT  G +  WG G  G LG G  +  
Sbjct: 164 GTTEDSLLP--QKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDR 221

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           L          P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +   
Sbjct: 222 L---------VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFED 272

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G  D    P +V+
Sbjct: 273 HLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVK 332

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            P  +         +  V+CGW+HT A +E K + +WG G S            GQLGHG
Sbjct: 333 FPEDQ--------KVAQVACGWRHTLAFTEKKNVFSWGRGTS------------GQLGHG 372

Query: 395 NDVDYIHPTIVN 406
             VD   P +++
Sbjct: 373 EIVDRNKPVMID 384



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 178/361 (49%), Gaps = 41/361 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST---GY 132
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG       I++   G 
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAED-RLVPTVLSGFDAAAPGITSVICGA 85

Query: 133 HHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            H++A + D  ++Y WG    G+LG G  +    P P  V+ L GI  KQ A G    +A
Sbjct: 86  DHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGIKIKQIACGDSHCLA 143

Query: 192 VTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           VT  G+V SWG   +G+LG G  E S+L          P+ I+  EGV VK+ AAG  H+
Sbjct: 144 VTMAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQSFEGVCVKMIAAGAEHT 193

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGE 308
           A + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G 
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGS 253

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGK 367
           LYT+G ++ G LG G  +    P +++    +S + QI       S GW+HT A+ S+GK
Sbjct: 254 LYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSSISQI-------SGGWRHTMALTSDGK 305

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WGW            +  GQ+G G+  D+  P  V F E+ K  QV+CG+ HT A  
Sbjct: 306 LYGWGW------------NKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFT 353

Query: 428 E 428
           E
Sbjct: 354 E 354



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 144/304 (47%), Gaps = 17/304 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 160

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+      SL P +I   +   V+ I+ G  H++A+T DG+LY WG    G LGLG + 
Sbjct: 161 LGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 219

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  +P KV  + G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 220 DRL--VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 274

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+   +   + G+ H+  +  +G++Y +G     ++   + +    P
Sbjct: 275 ------VPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFP 328

Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + K P  +   +V CG  HT   T    +++WG   +G LG G I   + P  +    
Sbjct: 329 VQV-KFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387

Query: 339 SESP 342
            + P
Sbjct: 388 PDGP 391



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 11/203 (5%)

Query: 19  KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
           K+ S  G+C + I++  +   A         WG G YG LGLG    R  P   S+ E  
Sbjct: 174 KIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGE 233

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
            +  +ACG  HT+ ++ +G +Y  G + +GQLG  +   + L P ++  LK   + QIS 
Sbjct: 234 KMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSSISQISG 292

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+ H+ A+T DG+LY WG N  GQ+G+G       P+  K      +   Q A G+  ++
Sbjct: 293 GWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKV--AQVACGWRHTL 350

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
           A T    V SWG G SG+LGHG+
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGE 373


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 180/370 (48%), Gaps = 49/370 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT   +E+   VY+ G + F 
Sbjct: 40  WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGCDLFT 99

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
              I      +L  LRI        QI+ G  H  A+T+DGE+  WG+N NGQLGLG   
Sbjct: 100 PQPIK-----ALHGLRIK-------QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE 147

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  +P K++   G+  K  A G E + AVT  G++  WG G  G LG G  +  L   
Sbjct: 148 DSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL--- 202

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  +EGVK+   A G+ H+  +  +G +Y +G     ++   +      P
Sbjct: 203 ------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTP 256

Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPF 338
             +  L  +   E+  G  HT  LTS G+LY WG N+ G +G+G  +V H SP +V+ P 
Sbjct: 257 HKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPH 315

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +V +SCGW+HT A++E + + +WG G            + GQLGHG  +
Sbjct: 316 EQ--------KVVHISCGWRHTLAVTERQNVFSWGRG------------TNGQLGHGESI 355

Query: 398 DYIHPTIVNF 407
           D   P ++  
Sbjct: 356 DRNIPKMIEV 365



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 173/358 (48%), Gaps = 49/358 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P  +S L   EVV ++ G  H
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAED-RLSPTYLSALDGHEVVSVTCGADH 79

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +    ++Y WG +              +  P  ++ L G+  KQ A G    +AVT
Sbjct: 80  TTAYSESFTQVYSWGCD--------------LFTPQPIKALHGLRIKQIACGDSHCLAVT 125

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV VK+ AAG  H+A +
Sbjct: 126 MDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSVKMVAAGAEHTAAV 176

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  +S +   +  +V CG  HT  ++S G LYT
Sbjct: 177 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYT 236

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           +G ++ G LG G  +   +P +++    E+ + +I       S GW+HT A+ S+GK+  
Sbjct: 237 YGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEI-------SGGWRHTMALTSDGKLYG 288

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G G++VD+  P  V F    K + +SCG+ HT A+ E
Sbjct: 289 WGW------------NKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTE 334


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 196/394 (49%), Gaps = 47/394 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  + R  P + S  E   + ++ CG  HT+  +E+   VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFG 97

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P+R + GLK  + QI+ G  H  A+T++G++  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSSDLFTPQPIRQLHGLK--IKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGT 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E + AVT  G++  WG G  G LG G     L 
Sbjct: 156 TEDSL--VPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRL- 212

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 213 --------VPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHL 264

Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   +  ++  G  HT  +TS G+LY WG N+ G +G+G      SP +V+ P
Sbjct: 265 IPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLP 324

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
             +         ++L+SCGW+HT A++E + + +WG G            + GQLG+G  
Sbjct: 325 LEQ--------KVILISCGWRHTLAVTERQNVFSWGRG------------TNGQLGNGEC 364

Query: 397 VDYIHPTIVNFGENVKALQV--SCGFNHTGALLE 428
            D   P I      +KAL V  SCG +   ++++
Sbjct: 365 TDRNVPVI------IKALSVDGSCGQHIESSMVD 392



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 173/362 (47%), Gaps = 45/362 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V   G  + GQLG  +     L P  +S L+  E++ +  G  H
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQD-RLSPTILSTLEGLEIISVICGADH 77

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ++Y WG    G+LG G  +    P P  +  L G+  KQ A G    +AVT
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQP--IRQLHGLKIKQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  H+A +
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
            E+G +Y +G      +   +      P  +S LP+ E++V   CG  HT  ++S G LY
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLY 245

Query: 311 TWGSNENGCLGIGSID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEG 366
           T+G ++ G LG G      + H  E +QG F           I  +S GW+HT A+ S+G
Sbjct: 246 TYGWSKYGQLGHGDYADHLIPHQLEALQGSF-----------ISQISGGWRHTMAVTSDG 294

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           K+  WGW            +  GQ+G G++VD   P  V      K + +SCG+ HT A+
Sbjct: 295 KLYGWGW------------NKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAV 342

Query: 427 LE 428
            E
Sbjct: 343 TE 344



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 143/309 (46%), Gaps = 37/309 (11%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           + V+ IS G  HS A+     +  WG+  +GQLG G    ++   PT +  L G+     
Sbjct: 14  RRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL--SPTILSTLEGLEIISV 71

Query: 183 ALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             G + ++A +     V SWG G  GRLGHG  S +         +TP+ I++L G+K+K
Sbjct: 72  ICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDL---------FTPQPIRQLHGLKIK 122

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGY 298
             A G  H   +   G+V  +G     ++       +  P  I     +P  + V  G  
Sbjct: 123 QIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPI-KMVAAGAE 181

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           HT  +T  GELY WG    G LG+G       PE+V  P  E         +V+V+CGW+
Sbjct: 182 HTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGE--------KMVMVACGWR 233

Query: 359 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HT ++ S G + T+GW            S  GQLGHG+  D++ P  +   +     Q+S
Sbjct: 234 HTISVSSSGGLYTYGW------------SKYGQLGHGDYADHLIPHQLEALQGSFISQIS 281

Query: 418 CGFNHTGAL 426
            G+ HT A+
Sbjct: 282 GGWRHTMAV 290



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 13/89 (14%)

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
           S V      ++L+S G  H+ A+  G ++ TWG G       EDG     QLGHG+  D 
Sbjct: 7   SEVTAPVRRVLLISAGASHSVALLSGNVVCTWGRG-------EDG-----QLGHGDAQDR 54

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
           + PTI++  E ++ + V CG +HT A  E
Sbjct: 55  LSPTILSTLEGLEIISVICGADHTIAYSE 83


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 176/364 (48%), Gaps = 36/364 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
           G G+ G+LG G  E R  P +  A     +  +ACG  HT   + T   +Y+ G  DFG+
Sbjct: 30  GRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N      P  I  L+  E+ QI+ G  H  A+T DGE+Y WG+N NGQLGLG   
Sbjct: 90  LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             ++P   K+    G+  K  A G E + AVT GGK+  WG G  G LG G     +   
Sbjct: 149 DSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRM--- 203

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  +   K+ + A G+ H+  + ++G++Y +G     ++   +      P
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257

Query: 282 SLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             ++ L  ++   V GG+ HT  LT  G+LY WG N+ G +G G +D   SP+ +  P  
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQ 317

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +V VSCGW+HT A+++   + +WG G S            GQLGHG+ VD
Sbjct: 318 HQ-------RVVQVSCGWRHTVAVTDKNNVYSWGRGTS------------GQLGHGDAVD 358

Query: 399 YIHP 402
              P
Sbjct: 359 RSAP 362



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 172/367 (46%), Gaps = 54/367 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  I  L   E+  ++ G  H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL-PRIIGALNDCEISLVACGADH 68

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +     +Y WG    G+LG G  +   +P P K   L G+  +Q A G    +AVT
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA--LQGLEIRQIACGDSHCLAVT 126

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P  +   EGV VK+ AAG  H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177

Query: 254 DENGRVYIFG----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            + G++Y +G          DR  D+ML  E        +         V CG  HT  +
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRG-DRMLPAEVPAVGDEKMCM-------VACGWRHTIAV 229

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           +  G+LYT+G ++ G LG G       P +V    +E  + Q       VS GW+HT A+
Sbjct: 230 SQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAA-LAEFNITQ-------VSGGWRHTVAL 281

Query: 364 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFN 421
           +E GK+  WGW            +  GQ+G G+  D+  P +++  G++ + +QVSCG+ 
Sbjct: 282 TEAGKLYGWGW------------NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWR 329

Query: 422 HTGALLE 428
           HT A+ +
Sbjct: 330 HTVAVTD 336



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   ++ +ACG +H L +T  G VY+ G N  GQ
Sbjct: 82  WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    SL P ++   +   V  ++ G  H++A+T  G+LY WG    G LGLG + 
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRG 200

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  +P +V  +        A G+  ++AV+  GK+ ++G    G+LGHG  +  L   
Sbjct: 201 DRM--LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  L    +   + G+ H+  + E G++Y +G     ++   + +    P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            LIS     + VV   CG  HT  +T    +Y+WG   +G LG G      +P+ +Q
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 35/311 (11%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +++V+ +S G  H+ A+     +  +G+  +GQLG G   A+   +P  +  L+      
Sbjct: 4   ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGD--AEDRHLPRIIGALNDCEISL 61

Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A G + + A +     + SWG G  GRLGHG  S +         + P  IK L+G+++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL---------FVPHPIKALQGLEI 112

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
           +  A G  H   +  +G VY +G     ++   + + +  P  +        + +  G  
Sbjct: 113 RQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAE 172

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           HT  +T GG+LY WG    G LG+G       P  V     E    ++C    +V+CGW+
Sbjct: 173 HTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE----KMC----MVACGWR 224

Query: 359 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HT A+S+ GK+ T+GW            S  GQLGHG+  D++ P  V         QVS
Sbjct: 225 HTIAVSQSGKLYTYGW------------SKYGQLGHGDYADHLLPHQVAALAEFNITQVS 272

Query: 418 CGFNHTGALLE 428
            G+ HT AL E
Sbjct: 273 GGWRHTVALTE 283


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 183/380 (48%), Gaps = 61/380 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT  +      VY+ G  DFG
Sbjct: 32  WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFG 91

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N    L P  I  L   ++ QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 92  RLG-HGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTT 150

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G++  WG G  G LG G  +  L  
Sbjct: 151 EDSL--VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRL-- 206

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
                   P+ +  ++G K+ + A G+ H+  +   G +Y +G             DR V
Sbjct: 207 -------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLV 259

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSID 326
              L      A R   IS+       + GG+ HT  LT+ G+LY WG N+ G +G G  D
Sbjct: 260 PHRL-----EALRGDNISQ-------ISGGWRHTMALTTDGKLYGWGWNKFGQVGAG--D 305

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGH 385
            +     +Q  F   P DQ    ++ +SCGW+HT A+++ + + +WG G           
Sbjct: 306 NIDHCSPIQIKF---PQDQ---KVIQISCGWRHTLAVTDKQNVFSWGRG----------- 348

Query: 386 SSGGQLGHGNDVDYIHPTIV 405
            + GQLGHG  VD   P I+
Sbjct: 349 -TNGQLGHGESVDRNTPMIL 367



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 181/358 (50%), Gaps = 37/358 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P ++S L   E+V ++ G  H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGD-AEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 135 SSAITV-DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +V   E+Y WG    G+LG G  +  + P P K   L G+  +Q A G    +AVT
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIK--ALHGLKIRQIACGDSHCLAVT 129

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+ +K+ AAG  H+A +
Sbjct: 130 MEGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            E+G ++ +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILT 370
           +G ++ G LG G  +    P R++    ++        I  +S GW+HT A++ +GK+  
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDN--------ISQISGGWRHTMALTTDGKLYG 292

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WGW            +  GQ+G G+++D+  P  + F ++ K +Q+SCG+ HT A+ +
Sbjct: 293 WGW------------NKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTD 338



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E R  P    A    ++  ++ G  HT+ LT  G +Y  G N FGQ+G  +
Sbjct: 246 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 305

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           NI +   P++I     ++V+QIS G+ H+ A+T    ++ WG+ +NGQLG G+   +  P
Sbjct: 306 NIDH-CSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTP 364

Query: 167 IPTKVECLSGIFTKQ 181
           +  +   + G   +Q
Sbjct: 365 MILEALSVDGCSGQQ 379


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 175/364 (48%), Gaps = 36/364 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
           G G+ G+LG G  E R  P +  A     +  +ACG  HT   + T   +Y+ G  DFG+
Sbjct: 30  GRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N      P  I  L+  E+ QI+ G  H  A+T DGE+Y WG+N NGQLGLG   
Sbjct: 90  LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             ++P   K+    G+  K  A G E + AVT  GK+  WG G  G LG G     +   
Sbjct: 149 DSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRM--- 203

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  +   K+ + A G+ H+  + ++G++Y +G     ++   +      P
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257

Query: 282 SLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             ++ L  ++   V GG+ HT  LT  G+LY WG N+ G +G G +D   SP+ +  P  
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQ 317

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +V VSCGW+HT A+++   + +WG G S            GQLGHG+ VD
Sbjct: 318 HQ-------RVVQVSCGWRHTVAVTDKNNVYSWGRGTS------------GQLGHGDAVD 358

Query: 399 YIHP 402
              P
Sbjct: 359 RSAP 362



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 173/367 (47%), Gaps = 54/367 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  I  L   E+  ++ G  H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAED-RLLPRIIGALNDCEISLVACGADH 68

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +     +Y WG    G+LG G  +   +P P K   L G+  +Q A G    +AVT
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA--LQGLEIRQIACGDSHCLAVT 126

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P  +   EGV VK+ AAG  H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177

Query: 254 DENGRVYIFG----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            ++G++Y +G          DR  D+ML  E        +         V CG  HT  +
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRG-DRMLPAEVPAVGDEKMCM-------VACGWRHTIAV 229

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           +  G+LYT+G ++ G LG G       P +V    +E  + Q       VS GW+HT A+
Sbjct: 230 SQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAA-LAEFNITQ-------VSGGWRHTVAL 281

Query: 364 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFN 421
           +E GK+  WGW            +  GQ+G G+  D+  P +++  G++ + +QVSCG+ 
Sbjct: 282 TEAGKLYGWGW------------NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWR 329

Query: 422 HTGALLE 428
           HT A+ +
Sbjct: 330 HTVAVTD 336



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   ++ +ACG +H L +T  G VY+ G N  GQ
Sbjct: 82  WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    SL P ++   +   V  ++ G  H++A+T  G+LY WG    G LGLG + 
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRG 200

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  +P +V  +        A G+  ++AV+  GK+ ++G    G+LGHG  +  L   
Sbjct: 201 DRM--LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  L    +   + G+ H+  + E G++Y +G     ++   + +    P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            LIS     + VV   CG  HT  +T    +Y+WG   +G LG G      +P+ +Q
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 143/311 (45%), Gaps = 35/311 (11%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +++V+ +S G  H+ A+     +  +G+  +GQLG G    +++P    +  L+      
Sbjct: 4   ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLP--RIIGALNDCEISL 61

Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A G + + A +     + SWG G  GRLGHG  S +         + P  IK L+G+++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL---------FVPHPIKALQGLEI 112

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
           +  A G  H   +  +G VY +G     ++   + + +  P  +        + +  G  
Sbjct: 113 RQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAE 172

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           HT  +T  G+LY WG    G LG+G       P  V     E    ++C    +V+CGW+
Sbjct: 173 HTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE----KMC----MVACGWR 224

Query: 359 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HT A+S+ GK+ T+GW            S  GQLGHG+  D++ P  V         QVS
Sbjct: 225 HTIAVSQSGKLYTYGW------------SKYGQLGHGDYADHLLPHQVAALAEFNITQVS 272

Query: 418 CGFNHTGALLE 428
            G+ HT AL E
Sbjct: 273 GGWRHTVALTE 283


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 182/368 (49%), Gaps = 37/368 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    +  P    A     ++ +ACG  HT+ LT  G V+  G  D G+
Sbjct: 5   WGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGR 64

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P     L  ++V Q++ G +H++A+T +G+LY WG    G+LG G +A
Sbjct: 65  LGHGDN-GWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEA 123

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P +VE L G    Q A G   +  VT  G + +WG   +G  GHG+        
Sbjct: 124 GHA--TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG----- 176

Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y PRL++ +   +V +I+A GF H+A + + G ++ +G+    ++      +   
Sbjct: 177 ---HQYLPRLLESMAAKRVAQISACGF-HTAIVTDAGELFTWGEGKFGRLGHMSERNCHS 232

Query: 281 PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P+++  +      +V CGG+HT V++  G LYT+G  E+G LG        +P  V+   
Sbjct: 233 PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVE--- 289

Query: 339 SESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
               +D +  S   ++CGW H+ A++ +G + TWG  G H           G+LGHGN  
Sbjct: 290 ---ALDGMFVS--QITCGWSHSVALTVKGLVYTWG-NGDH-----------GKLGHGNGR 332

Query: 398 DYIHPTIV 405
               P  V
Sbjct: 333 KVAVPQAV 340



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 168/342 (49%), Gaps = 39/342 (11%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGK 149
            V+  G  + GQLG+ +      EP  +  L+   V QI+ G  H+  +T DGE++ WG+
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQD-EPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +G+LG G    K +P  T  + L+G    Q   G   + AVTG G + +WG G  G+L
Sbjct: 60  GDDGRLGHGDNGWKYVPRMT--QSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKL 117

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR--AV 267
           GHG E+            TP+ ++ L G  V   A G  H+A +  +G +Y +GD+   V
Sbjct: 118 GHGDEAG---------HATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
                 EG H   P L+  +      ++   G+HT ++T  GEL+TWG  + G LG  S 
Sbjct: 169 AGHGETEG-HQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSE 227

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
              HSP  V     + P          VSCG  HTA +SE G++ T+G GG HG      
Sbjct: 228 RNCHSPTIVDYMVGKKPRQ--------VSCGGFHTAVVSEDGRLYTFG-GGEHG------ 272

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                QLGH + V+ + PT V   + +   Q++CG++H+ AL
Sbjct: 273 -----QLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVAL 309



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 140/289 (48%), Gaps = 35/289 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG+  +GQLGLG  + +    PT V+ L G+  +Q A G   +V +T  G+V +WG 
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQ--DEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG             +Y PR+ + L G  V     G  H+A +  NG +Y +G
Sbjct: 60  GDDGRLGHGDNGW---------KYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWG 110

Query: 264 DRAVDKMLF-QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                K+    E  HA  P  +  L      ++ CG  HT ++T+ G LYTWG  ENG  
Sbjct: 111 GGMYGKLGHGDEAGHAT-PKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVA 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
           G G  +      R+    +   V QI       +CG+ HTA +++ G++ TWG     G 
Sbjct: 170 GHGETEGHQYLPRLLESMAAKRVAQIS------ACGF-HTAIVTDAGELFTWG----EGK 218

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           F        G+LGH ++ +   PTIV++    K  QVSCG  HT  + E
Sbjct: 219 F--------GRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSE 259



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +GRLG  S  +   P +         + ++CGG HT  ++E G +Y  G  + GQ
Sbjct: 214 WGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG ++ +   + P  +  L    V QI+ G+ HS A+TV G +Y WG   +G+LG G   
Sbjct: 274 LGHNDRVN-KMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGN-- 330

Query: 162 AKVIPIPTKVE 172
            + + +P  VE
Sbjct: 331 GRKVAVPQAVE 341


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 183/371 (49%), Gaps = 44/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   +  + CG  HT+  +E+G  VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFG 97

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  ++    L P  I  L+  ++ QI+ G  H  A+T+D ++  WG+N NG+LGLG  
Sbjct: 98  RLGHGDHSDL-LIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTA 156

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++    I  K  A G E SVA+T  G +  WG G  G LG G  +     
Sbjct: 157 EDSL--LPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRND---- 210

Query: 221 LRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    RL+ E   ++G K+ + A G+ H+ C+  +G +Y  G     ++   +   
Sbjct: 211 ---------RLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFED 261

Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P  +  L   +  +V  G  H+  LTS G+L  WG N+ G +G+G+     SP +V 
Sbjct: 262 HLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVN 321

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            P  +         + ++SCGW+HT A++E + + +WG G +            GQLG+G
Sbjct: 322 FPHDQ--------KVQMISCGWRHTIAVTERENVYSWGRGAN------------GQLGNG 361

Query: 395 NDVDYIHPTIV 405
             +D   PTI+
Sbjct: 362 ETIDRNVPTII 372



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 176/361 (48%), Gaps = 44/361 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P ++S L  ++++ ++ G  H
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHGDT-DDRLFPTKLSALDGQDIICVTCGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G ++Y WG    G+LG G  +  +IP P K   L G+  +Q A G    +AVT
Sbjct: 78  TMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKA--LQGLMIQQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              +VLSWG   +G LG G  E S+L          P+ I+  E + +K+ AAG  HS  
Sbjct: 136 MDSQVLSWGRNQNGELGLGTAEDSLL----------PQKIQIFEEIPIKMVAAGAEHSVA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGE 308
           I ++G +Y +G      +   + N    P  ++    K+     V CG  HT  ++S G 
Sbjct: 186 ITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAM---VACGWRHTICVSSSGG 242

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGK 367
           LYT G  + G LG G  +    P +VQ   S+  + Q       VS GW+H+ A+ S G+
Sbjct: 243 LYTNGWGKYGQLGHGDFEDHLVPRKVQA-LSDKFISQ-------VSGGWRHSMALTSSGQ 294

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +L WGW            +  GQ+G GN+ D   P  VNF  + K   +SCG+ HT A+ 
Sbjct: 295 LLGWGW------------NKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVT 342

Query: 428 E 428
           E
Sbjct: 343 E 343


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 180/364 (49%), Gaps = 42/364 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  +    P   S      ++++ CG  +T+ +  + G VY+ G  DFG
Sbjct: 37  WGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFG 96

Query: 102 QLGISE-NIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG  + N  +   P+   SG  + V +++ G  H+  +  +GEL+ +G+N NGQLGLG 
Sbjct: 97  RLGHGDCNDVFVPRPIEFFSG--RPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGH 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               + P    V  L G   +  A G E S+A T  G V SWG G  G LG G+      
Sbjct: 155 TNDCLSP--QLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGE------ 206

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              S   Y P  +  LEG+++  A  G+ HSA + E+GRV+ FG     ++    G+H  
Sbjct: 207 ---SQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQL--GHGDHTD 261

Query: 280 R--PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           R  P  ++ L ++    V GG+ HT    S G LY WG N+ G LG+G      SP  V 
Sbjct: 262 RTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVG 321

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           G  +   V        LV+CGW+HT A++E G++ +WG G              GQLGHG
Sbjct: 322 GALAGQRVS-------LVTCGWRHTVAVTEGGRVYSWGRG------------VNGQLGHG 362

Query: 395 NDVD 398
            + D
Sbjct: 363 AEQD 366



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 137/313 (43%), Gaps = 35/313 (11%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
           R S  +  V  +S G  HS AI   G +  WG+  +GQLG G+  A     P  +  L+ 
Sbjct: 7   RSSEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQ--ADECLAPKAISTLTD 64

Query: 177 IFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
              +    G E ++AV    G+V SWG G  GRLGHG  + +         + PR I+  
Sbjct: 65  AGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDV---------FVPRPIEFF 115

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEV 293
            G  V   A G  H+  +   G ++ FG     ++     N    P L+  L       V
Sbjct: 116 SGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV 175

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG  H+   T  G +++WG    G LG G     + P RV G      ++ I   +V  
Sbjct: 176 ACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVG------LEGI--RMVSA 227

Query: 354 SCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
            CGW+H+A +SE G++ T+GW            S  GQLGHG+  D   P  V    + +
Sbjct: 228 ECGWRHSAVVSEDGRVFTFGW------------SKYGQLGHGDHTDRTVPCQVAALRHTR 275

Query: 413 ALQVSCGFNHTGA 425
              V+ G+ HT A
Sbjct: 276 ISSVAGGWRHTMA 288



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG LG G  + R+ P      E   + +  CG  H+  ++E G V+  G + +GQ
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQ 253

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  ++   ++ P +++ L+   +  ++ G+ H+ A    G LY WG N  GQLGLG  +
Sbjct: 254 LGHGDHTDRTV-PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSS 312

Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            +  P P  V   L+G        G+  +VAVT GG+V SWG G +G+LGHG E  +
Sbjct: 313 DR--PSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 109/251 (43%), Gaps = 35/251 (13%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   SVA+   G V SWG G  G+LGHGQ    L          P+ I  L    ++ 
Sbjct: 19  SCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL---------APKAISTLTDAGIES 69

Query: 243 AAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVVCGGY 298
              G  ++ A     G+VY +G     ++   + N    P  I   S  P    V CG  
Sbjct: 70  VVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPV-HRVACGDT 128

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           HT V+   GEL+T+G N+NG LG+G  +   SP+ V     E         +  V+CG +
Sbjct: 129 HTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGE--------RVRSVACGSE 180

Query: 359 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           H+ A +E G + +WGWG              G LG G   D   PT V   E ++ +   
Sbjct: 181 HSLAATESGTVFSWGWG------------RYGNLGDGESQDRYLPTRVVGLEGIRMVSAE 228

Query: 418 CGFNHTGALLE 428
           CG+ H+  + E
Sbjct: 229 CGWRHSAVVSE 239


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 173/368 (47%), Gaps = 34/368 (9%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
           A WG G+ G+LG G  +    P   +A     + A+ CG  +T+ +  + G +Y+ G  D
Sbjct: 32  ASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGD 91

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGL 157
           FG+LG  E  G    P  I+    + V +++ G  H+  +T  DG LY +G+N NGQLGL
Sbjct: 92  FGRLGHGE-CGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGL 150

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G     + P    V  L G      A G E S+A T  G V SWG G  G LG G     
Sbjct: 151 GHTNDCLSP--QLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGD---- 204

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S   YTP  +  L+GV V     G+ HSA + + GRV+ FG     ++   +   
Sbjct: 205 -----SQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD 259

Query: 278 ARRPSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             RP L++ L +     V GG+ HT    S G LY WG N+ G LG+G  +   +P  V 
Sbjct: 260 HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVA 319

Query: 336 G----PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
           G                 + L++CGW+HT A++E G++ +WG G              GQ
Sbjct: 320 GFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRG------------VNGQ 367

Query: 391 LGHGNDVD 398
           LGHG + D
Sbjct: 368 LGHGAEQD 375



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 144/309 (46%), Gaps = 36/309 (11%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +  V+ +S G  HS A+   G +  WG+  +GQLG G+  A     PT +  L+      
Sbjct: 9   EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDA 66

Query: 182 AALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
              G E +VAV    G++ SWG G  GRLGHG+   +         + PR I    G  V
Sbjct: 67  VVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDV---------FVPRPIAFFSGRPV 117

Query: 241 KIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG 297
              A G  H+  + + +G +Y FG     ++     N    P L++ L       V CG 
Sbjct: 118 ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGS 177

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            H+   T  G +++WG    G LG G     ++P RV G      +D +  ++  V CGW
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG------LDGV--TVTSVVCGW 229

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
           +H+A ++ EG++ T+GW            S  GQLGHG+ VD+  P +V   ++ +   V
Sbjct: 230 RHSAVVTDEGRVFTFGW------------SKYGQLGHGDHVDHTRPCLVAGLQHCRVSTV 277

Query: 417 SCGFNHTGA 425
           + G+ HT A
Sbjct: 278 AGGWRHTMA 286



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG LG G  + R+ P      +  ++ ++ CG  H+  +T+ G V+  G + +GQ
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQ 251

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +++ ++  P  ++GL+   V  ++ G+ H+ A   +G LY WG N  GQLGLG   
Sbjct: 252 LGHGDHVDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSE 310

Query: 162 AKVIPIPTK-------VECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +  P P                  ++ AL   G+  +VAVT  G+V SWG G +G+LGH
Sbjct: 311 DRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGH 370

Query: 212 GQESSI 217
           G E  +
Sbjct: 371 GAEQDL 376



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 21/196 (10%)

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
           E  +V   + G  HS  + + G V  +G     ++   + +    P+ I+ L  +  + V
Sbjct: 8   EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAV 67

Query: 294 VCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           VCG  Y   V +S G++Y+WG  + G LG G    +  P  +   FS  PV +       
Sbjct: 68  VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPI-AFFSGRPVAR------- 119

Query: 353 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           V+CG  HT  +++G           G     G +  GQLG G+  D + P +V   +  +
Sbjct: 120 VACGDTHTLVVTQGD----------GALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGER 169

Query: 413 ALQVSCGFNHTGALLE 428
              V+CG  H+ A  E
Sbjct: 170 VSSVACGSEHSLAATE 185


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 196/391 (50%), Gaps = 41/391 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+ G GS   +  P+     +  ++  +ACG  HT+ LTE   V++ G  D G+
Sbjct: 11  WGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGR 70

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG ++N  +   P  +S L  K + Q++ G +H++AI+  G L+ WG    G+LG G + 
Sbjct: 71  LGHADN-HWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEV 129

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P +VE   G   +Q A G   + A+  GG+V  WG   +G  G G+ +      
Sbjct: 130 GH--PAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAE----- 182

Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y P+ ++ L+GVK+ +IAA GF H+A I ++G ++ +G+    ++   +GN   +
Sbjct: 183 ---HQYLPKKLEALKGVKITQIAACGF-HTAAITQDGALWSWGEGKFGRL--GQGNEKNQ 236

Query: 281 --PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L     ++V CGG+H+  +T  G++ T+G  E+G LG G       P  V+ 
Sbjct: 237 VTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKA 296

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                        IV V+CGW HT  +SE GK+ T+G  G H           G+LGHG 
Sbjct: 297 LEG--------AGIVQVTCGWSHTVTLSEDGKVFTFG-NGDH-----------GKLGHGA 336

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +     P +V    N+K  +V+    HT AL
Sbjct: 337 NAKSALPKLVESLANMKVAKVASYNEHTVAL 367



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 37/342 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
           +Y+ G  + GQ G        + P+ + GLK   VVQI+ G  H+  +T D +++ WG+ 
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            +G+LG      K +P    V  L+G   KQ   G   + A++  G + +WG G  G+LG
Sbjct: 67  DDGRLGHADNHWKYVP--HLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG E              P  ++   G +V+  A G  H+A +   G VY +GDR     
Sbjct: 125 HGNE---------VGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVC 175

Query: 271 -LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            + +   H   P  +  L   +  ++   G+HT  +T  G L++WG  + G LG G+   
Sbjct: 176 GIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKN 235

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 386
             +P  V+G      V Q       V+CG  H+A ++E G +LT+G GG HG        
Sbjct: 236 QVTPCCVEG-LQGVRVKQ-------VACGGFHSACVTEDGDVLTFG-GGEHG-------- 278

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              QLGHG+  +   P +V   E    +QV+CG++HT  L E
Sbjct: 279 ---QLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSE 317



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 138/293 (47%), Gaps = 37/293 (12%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           D  LY WG+  +GQ G G    + +P+P  VE L  +   Q A G   +V +T    V S
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMP--VEGLKHLTVVQIACGSGHTVVLTEDKDVWS 62

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLGH           +  +Y P L+  L G  +K    G  H+A I + G ++
Sbjct: 63  WGRGDDGRLGHAD---------NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALW 113

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
            +G     K+    GN    P+      +     E++ CG  HT  L +GGE+Y WG  E
Sbjct: 114 TWGGGMYGKL--GHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRE 171

Query: 317 NGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
           NG  GIG + +  + P++++       + QI       +CG+ HTAAI++   L W WG 
Sbjct: 172 NGVCGIGEAAEHQYLPKKLEA-LKGVKITQI------AACGF-HTAAITQDGAL-WSWG- 221

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             G F        G+LG GN+ + + P  V   + V+  QV+CG  H+  + E
Sbjct: 222 -EGKF--------GRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTE 265


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 175/373 (46%), Gaps = 41/373 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
           WG G+ G+LG G  E R  P V +A    +   +A    CG  HT  +  E   +Y+ G 
Sbjct: 44  WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            DFG+LG   N      P  I  L+   + QI+ G  H  A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG     ++P   K++   G+  K  A G E + AVT  G +  WG G  G LG G    
Sbjct: 163 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            L          P  +  + G K+ + A G+ H+  +  +G +Y +G     ++   +  
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P  +  L  +   ++  G  HT  L + G+LY WG N+ G +G+G  +   SP +V
Sbjct: 272 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 331

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGH 393
             P  +         +V V+CGW+HT A++E K + +WG G S            GQLGH
Sbjct: 332 NFPNEQK--------VVQVACGWRHTLALTEAKNVFSWGRGTS------------GQLGH 371

Query: 394 GNDVDYIHPTIVN 406
           G  VD   P +++
Sbjct: 372 GEIVDRNIPKMID 384



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 180/368 (48%), Gaps = 41/368 (11%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G +H++ L   G V + G  + GQLG  +     +  +  +        ++
Sbjct: 19  ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 78

Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +    G  H++A + +  +LY WG    G+LG G  +    P P  ++ L G+   Q A 
Sbjct: 79  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 136

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G    +AVT  G V SWG   +G+LG G  E S+L          P+ I+  EGV+VK+ 
Sbjct: 137 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 186

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTC 301
           AAG  H+A + E+G +Y +G      +   + +    P  +S +   + V+  CG  HT 
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            ++S G +YT+G ++ G LG G  +    P +++            T+I  +S GW+HT 
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKD--------TTISQISGGWRHTM 298

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++ +GK+  WGW            +  GQ+G G++ D+  P  VNF    K +QV+CG+
Sbjct: 299 ALAADGKLYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGW 346

Query: 421 NHTGALLE 428
            HT AL E
Sbjct: 347 RHTLALTE 354



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 17/302 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +  +ACG +H L +T  G V++ G N  GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 160

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  N   SL P +I   +   V  I+ G  H++A+T DG+LY WG    G LGLG + 
Sbjct: 161 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 219

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  IP KV  ++G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 220 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 274

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+   +   + G+ H+  +  +G++Y +G     ++   +      P
Sbjct: 275 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 328

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             ++  P  ++VV   CG  HT  LT    +++WG   +G LG G I   + P+ +    
Sbjct: 329 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 387

Query: 339 SE 340
           S+
Sbjct: 388 SD 389


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 175/373 (46%), Gaps = 41/373 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
           WG G+ G+LG G  E R  P V +A    +   +A    CG  HT  +  E   +Y+ G 
Sbjct: 49  WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 108

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            DFG+LG   N      P  I  L+   + QI+ G  H  A+TV G ++ WG+N NGQLG
Sbjct: 109 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 167

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG     ++P   K++   G+  K  A G E + AVT  G +  WG G  G LG G    
Sbjct: 168 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 225

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            L          P  +  + G K+ + A G+ H+  +  +G +Y +G     ++   +  
Sbjct: 226 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P  +  L  +   ++  G  HT  L + G+LY WG N+ G +G+G  +   SP +V
Sbjct: 277 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 336

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGH 393
             P  +         +V V+CGW+HT A++E K + +WG G S            GQLGH
Sbjct: 337 NFPNEQK--------VVQVACGWRHTLALTEAKNVFSWGRGTS------------GQLGH 376

Query: 394 GNDVDYIHPTIVN 406
           G  VD   P +++
Sbjct: 377 GEIVDRNIPKMID 389



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 180/368 (48%), Gaps = 41/368 (11%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G +H++ L   G V + G  + GQLG  +     +  +  +        ++
Sbjct: 24  ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 83

Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +    G  H++A + +  +LY WG    G+LG G  +    P P  ++ L G+   Q A 
Sbjct: 84  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 141

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G    +AVT  G V SWG   +G+LG G  E S+L          P+ I+  EGV+VK+ 
Sbjct: 142 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 191

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTC 301
           AAG  H+A + E+G +Y +G      +   + +    P  +S +   + V+  CG  HT 
Sbjct: 192 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 251

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            ++S G +YT+G ++ G LG G  +    P +++            T+I  +S GW+HT 
Sbjct: 252 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKD--------TTISQISGGWRHTM 303

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++ +GK+  WGW            +  GQ+G G++ D+  P  VNF    K +QV+CG+
Sbjct: 304 ALAADGKLYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGW 351

Query: 421 NHTGALLE 428
            HT AL E
Sbjct: 352 RHTLALTE 359



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 17/302 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +  +ACG +H L +T  G V++ G N  GQ
Sbjct: 106 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 165

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  N   SL P +I   +   V  I+ G  H++A+T DG+LY WG    G LGLG + 
Sbjct: 166 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 224

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  IP KV  ++G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 225 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 279

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+   +   + G+ H+  +  +G++Y +G     ++   +      P
Sbjct: 280 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 333

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             ++  P  ++VV   CG  HT  LT    +++WG   +G LG G I   + P+ +    
Sbjct: 334 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 392

Query: 339 SE 340
           S+
Sbjct: 393 SD 394


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 173/342 (50%), Gaps = 29/342 (8%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P  C  F    +  + CG  HT+FL + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +      +P  +  L  ++ V +S G  H+ A+   G+++ WG  S+GQLGL  
Sbjct: 64  GQLGHEKP---RKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNN 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + + +P  ++CLS +   Q A G+  S A++ GG+V SWG    G+LG G   S + 
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   TP++I+ L+G+     +AG  HS  I  +G V+ +G     ++   + N   
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRW 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+ V+   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 FPALLKSL-RSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGS 376
                  + +   +  +SCG +HT A   S GK+ ++G GG+
Sbjct: 289 ------FELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S   P +  + +      L+ GGAH+  +T +G V+  G N FG
Sbjct: 161 WGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++        L  S   + V+ +S G  H++A+T +G ++ +G    GQLG     
Sbjct: 221 QLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
            ++   P KV  L G    Q + G + ++A T   GK+ S+G GG+G+LG
Sbjct: 281 HEI--NPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 48/291 (16%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K E   G        G + +V +   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G+LGH +               P  +  L+   +   + G  H+  +++ G+++ +G   
Sbjct: 64  GQLGHEKPRK-----------KPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGS 112

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           D  +    F+E    R P  I  L   +  +V CG  H+  L+ GG++++WG N+ G LG
Sbjct: 113 DGQLGLNNFEEC--VRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLG 170

Query: 322 IG----SIDVLHSPERVQG-PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGG 375
           +G    SI      + +QG PF++            +S G  H+ AI+  G +  WG   
Sbjct: 171 LGMHGSSISTPQIIQSLQGIPFAQ------------LSAGGAHSFAITLSGAVFGWG--- 215

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     +  GQLG  +  D   P ++    + + + VSCG +HT AL
Sbjct: 216 ---------RNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAAL 257


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 188/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  FE   ++ + CG  HT+FL E G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +      +P ++  L  + +V +S G  H+ A+   G+++ WG  S+GQLGL  
Sbjct: 64  GQLGHEKA---RKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  V+ LS +   Q A G+  S+A+  GG++ SWG    G+LG GQ+ + + 
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVC 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   +P++I+ L+G+     +AG  HS  +  +G ++ +G     ++   + +  R
Sbjct: 180 --------SPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRR 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P L+  L  S++VV   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 FPVLLKTL-RSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT A   S GKI ++G GG+            GQLG  
Sbjct: 289 ------FELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGN------------GQLGTR 330

Query: 395 NDVDYIHPTIV 405
           +  + I PT V
Sbjct: 331 STCNRISPTPV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 126/289 (43%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P + E   G   +    G   +V +   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+V+ +G  +
Sbjct: 64  GQLGHEK-----------ARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +  R P  +  L   +  +V CG +H+  L  GGE+++WG N+ G LG+G
Sbjct: 113 DGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLG 172

Query: 324 SI-DVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
                + SP+ +Q     PF +            +S G  H+  ++  G I  WG     
Sbjct: 173 QQGACVCSPQVIQSLQGIPFGQ------------ISAGGAHSFGLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG G++ D   P ++    + + + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAAL 257



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGLG  + R  PV+        +  + CG  HT  LT+ G V+  G   +GQ
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG   +  + + P ++  L   VV QI+ G  H+ A I   G++  +G   NGQLG    
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRST 332

Query: 161 AAKVIPIPTK 170
             ++ P P K
Sbjct: 333 CNRISPTPVK 342


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 44/292 (15%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   + G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIG-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
           G+G       SP+ ++     PF +            V+ G  H+  ++  G I  WG  
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG-- 215

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                      +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 ----------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 161/327 (49%), Gaps = 26/327 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT   +E    VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + G+K  + Q++ G  H  A+T+ GE+  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P  ++   GI  K  A G E + AVT  G +  WG G  G LG G  +    
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  + P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264

Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   S   + GG+ HT  LTS G+LY WG N+ G +G G      SP +V  P
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP 324

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAIS 364
             +         +  V+CGW+HT A +
Sbjct: 325 EEQ--------KVAQVACGWRHTLAFT 343



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 175/357 (49%), Gaps = 39/357 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     +   G  + GQLG  +     L P  ISG     +  +  G  H
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAED-RLVPTVISGFDAPGITSVICGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G       P P  V+ L GI  KQ A G    +AVT
Sbjct: 78  TTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQP--VKALQGIKIKQLACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+VLSWG   +G+LG G  E S+L          P+ I+  EG+ VK+ AAG  H+A 
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
           T+G ++ G LG G  +    P +V+    +S   QI       S GW+HT A+ S+GK+ 
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQI-------SGGWRHTMALTSDGKLY 297

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            WGW            +  GQ+G G++ D+  P  VNF E  K  QV+CG+ HT A 
Sbjct: 298 GWGW------------NKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAF 342



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 30/196 (15%)

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLIS--KLPYSEEVVCG 296
           V + +AG  HS  +     +  +G R  D  L       R  P++IS    P    V+CG
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWG-RGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 297 GYHTCVLTSGG-ELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQIC-TSIVLV 353
             HT   +    ++Y+WG  + G LG G S DV          F+  PV  +    I  +
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDV----------FTPQPVKALQGIKIKQL 124

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H  A++  G++L+WG             +  GQLG G   D + P  +   E + 
Sbjct: 125 ACGDSHCLAVTMAGEVLSWG------------RNQNGQLGLGTTEDSLLPQTIQAFEGIS 172

Query: 413 ALQVSCGFNHTGALLE 428
              ++ G  HT A+ E
Sbjct: 173 VKMIAAGAEHTAAVTE 188



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 13/87 (14%)

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
            D+   ++VLVS G  H+ A+  G +L TWG G       EDG     QLGHG+  D + 
Sbjct: 9   ADEAPPAVVLVSAGASHSVALLAGNVLCTWGRG-------EDG-----QLGHGDAEDRLV 56

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLE 428
           PT+++  +      V CG +HT A  E
Sbjct: 57  PTVISGFDAPGITSVICGADHTTAYSE 83


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 196/413 (47%), Gaps = 58/413 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +G+LGL +  + + P          +K +  G + ++ LT  G VY+ G N  G 
Sbjct: 54  WGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGI 113

Query: 103 LGISENIGYSL-EPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
           LG  + + +++ +P RI   L K++ QIS G  H +A+T DGE+Y WG    G+LG  + 
Sbjct: 114 LGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEE 173

Query: 160 -KAAKVIPI---------------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            K  + I I               P K+E L  I  KQ A G + +V ++  GKV ++G 
Sbjct: 174 LKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGY 233

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G LG+  + +        S  TP+LIK+L  + VKI +AG+   A I + G++Y +G
Sbjct: 234 NQYGSLGYVSDQN--------SVTTPQLIKDLNDI-VKI-SAGYSFCAAITKQGKLYTWG 283

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
           +    ++   +  +  +PS+++       +V   CG      LT  G+LYTWG   +G L
Sbjct: 284 NNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQL 343

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTF 380
           G G+   L++P  V          +    I+ ++CG  H A I+E   L           
Sbjct: 344 GHGNKSDLYAPRHV----------EFKQKIIKIACGGSHAAFITEDNQLY---------- 383

Query: 381 SEDGHSSGGQLGHGNDVD-----YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            + G  S GQLG G +V         P +V + +  + + V+CG  HT A+ +
Sbjct: 384 -QFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQ 435



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 163/350 (46%), Gaps = 35/350 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKN 150
           VY+ G   FGQLG+     Y   P  I  L  K++ ++  G   S A+T +GE+Y WGKN
Sbjct: 51  VYSWGYGGFGQLGLQNENNY-YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             G LG   + +  +  P ++E L G   KQ + G     AVT  G+V +WG    G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 211 H----GQESSI------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           H     QE  I      L          P+ I+ L  +K K  A G   +  + E+G+VY
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVY 229

Query: 261 IFGDRAVDKMLF-QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            FG      + +  + N    P LI  L    ++  G      +T  G+LYTWG+N NG 
Sbjct: 230 TFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQ 289

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
           LG         P  V G  S++       SIV VSCG    AA++ +G++ TWG+GG   
Sbjct: 290 LGNSQSLYQTKPSIVTGFGSQN-------SIVDVSCGDNFIAALTQQGQLYTWGFGGD-- 340

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                     GQLGHGN  D   P  V F +  K ++++CG +H   + E
Sbjct: 341 ----------GQLGHGNKSDLYAPRHVEFKQ--KIIKIACGGSHAAFITE 378



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 29  RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
            +I++  Q+     WG G  G+LG G+    + P       K  +  +ACGG+H  F+TE
Sbjct: 321 NFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITE 378

Query: 89  TGCVYATGLNDFGQLGISENIGYSLE----PLRISGLK-KEVVQISTGYHHSSAITVD 141
              +Y  G    GQLGI +N+         P  +   K K+VV ++ G  H+ AIT +
Sbjct: 379 DNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH             S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
                  SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 46/293 (15%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   A G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIGSIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGW 373
           G+G ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG 
Sbjct: 170 GLG-IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG- 215

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                       +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -----------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
                  SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
                  SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 178/379 (46%), Gaps = 40/379 (10%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTL-FLTETGCV 92
           L  +    WG G+ G+LG G  E R  P + S F+   + ++  CG  HT  +  E   +
Sbjct: 36  LSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQL 95

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
           Y+ G  DFG+LG   N      P  I  L+  ++ QI+ G  H  A+T  G+++ WG+N 
Sbjct: 96  YSWGWGDFGRLGHG-NSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ 154

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           NGQLGLG     +  +P K+    G+  K  A G E + A+   G +  WG G  G LG 
Sbjct: 155 NGQLGLGNTEDSL--LPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGL 212

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G  +  L          P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++ 
Sbjct: 213 GDRNDRL---------VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLG 263

Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             +      P  +  L   +  ++  G  HT  +   G+LY WG N+ G +G+   +V H
Sbjct: 264 HGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVAD-NVDH 322

Query: 330 -SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSS 387
            SP +V  P  +         +  V+CGW+HT A++E K + +WG G S           
Sbjct: 323 CSPVQVIFPDEQ--------KVAQVACGWRHTLALTENKNVFSWGRGTS----------- 363

Query: 388 GGQLGHGNDVDYIHPTIVN 406
            GQLGHG  +D   P +++
Sbjct: 364 -GQLGHGEIIDRNTPKMID 381



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 181/366 (49%), Gaps = 40/366 (10%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
           + ++  ++ G  H++ L  +  V + G  + GQLG  +     + P  +SG     +   
Sbjct: 19  EQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV-PTLLSGFDVPGIASV 77

Query: 128 ISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +  G  H++A + +  +LY WG    G+LG G  +    P P  +E L GI  KQ A G 
Sbjct: 78  VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQP--IEALQGIKIKQIACGD 135

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +AVT  G+V SWG   +G+LG G  E S+L          P+ I   EGV VK+ AA
Sbjct: 136 SHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL----------PQKIHAFEGVCVKMIAA 185

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVL 303
           G  H+A I E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  +
Sbjct: 186 GAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTV 245

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           +S G+LYT+G ++ G LG G  +    P ++     E+  D+  + I   + GW+HT A+
Sbjct: 246 SSSGDLYTYGWSKYGQLGHGDFEDHLVPHKL-----EALKDRFISQI---AGGWRHTMAV 297

Query: 364 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           + +GK+  WGW            +  GQ+G  ++VD+  P  V F +  K  QV+CG+ H
Sbjct: 298 AGDGKLYGWGW------------NKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRH 345

Query: 423 TGALLE 428
           T AL E
Sbjct: 346 TLALTE 351


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+S S   P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + + P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G  +    +P+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 172 GFELKSQSAPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH             S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+S S   P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + + P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G  +    +P+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 172 GFELKSQSAPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 424

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 210/443 (47%), Gaps = 47/443 (10%)

Query: 9   MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLG-LGSLE---------S 58
           M  YY K++I     +   +    S  +R     WGN D G  G L S E         S
Sbjct: 1   MFSYYGKKNILFIRFIYHNRYSYKSKGRRSIVYAWGNSDGGWTGHLPSEEYEDHVSGATS 60

Query: 59  RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEP 115
            +RP + ++ +  S++ +ACG   TLF+T+ G VY++G+  +GQLG   + E  G +L  
Sbjct: 61  VYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL-- 118

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
             I  + ++V+  + G  HS  +T  G LY  G    G+LGLG   ++ +  P  VE L+
Sbjct: 119 --IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESLA 175

Query: 176 GIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSEY 227
               K  + A G   S+A++  GKV S+G+   G LGHG+    + FL          E 
Sbjct: 176 REEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNMET 234

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +PRLI+ LE  +++  + G  H+  I++ G  + +G             +  +P  +  L
Sbjct: 235 SPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHL 294

Query: 288 PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
           P   +++V GG HT  LT GG+++ WG N  GCLG+G         R+     E  + Q 
Sbjct: 295 PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRI----VEKLLQQA 350

Query: 347 CTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
              I  ++ GW  + A+ SEG + +WG           GH+  G LG G + D   P  +
Sbjct: 351 KEPIQWIAAGWFFSMAVDSEGYVYSWG----------RGHA--GALGTGEEEDKWEPVAI 398

Query: 406 NF--GENVKALQVSCGFNHTGAL 426
               GE ++  ++  GFN+  A+
Sbjct: 399 QNEQGEPLQVDRIYAGFNYAIAV 421


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VY+ GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +  Y   P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 132/328 (40%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +  +    +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGF------------------LRSTSE 226
           G+LGH +                      E+  L                    L  + E
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEE 123

Query: 227 Y--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
           Y   PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 YIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           I  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 IKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         QV+CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQVACGRQHTSAFV 310


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VY+ GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +  Y   P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 133/331 (40%), Gaps = 68/331 (20%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +  +    +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQ----------------------ESSILGF------------------LRS 223
              G+LGH +                      E+  L                    L  
Sbjct: 61  NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLG 120

Query: 224 TSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
           + EY   PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      
Sbjct: 121 SEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 281 PSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P LI  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++  
Sbjct: 181 PQLIKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 239

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            S+         IV + CG  HTAA++ EG + T+G GG             GQLGH + 
Sbjct: 240 RSQ--------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNST 279

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
              I+P  V         QV+CG  HT A +
Sbjct: 280 SHEINPRKVFELMGSIVTQVACGRQHTSAFV 310


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VY+ GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +  Y   P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 132/328 (40%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +  +    +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGF------------------LRSTSE 226
           G+LGH +                      E+  L                    L  + E
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEE 123

Query: 227 Y--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
           Y   PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 YIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           I  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 IKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         QV+CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQVACGRQHTSAFV 310


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 187/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+  S  +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G  +    SP+ ++     PF++            V+ G  H+  ++  G I  WG    
Sbjct: 172 GFELKRQSSPQLIKSLLGIPFTQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 187/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+  S  +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G  +    SP+ ++     PF++            V+ G  H+  ++  G I  WG    
Sbjct: 172 GFELKRQSSPQLIKSLLGIPFTQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 73  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 128

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 181

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 182 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 240

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 241 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 297

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  V+CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 298 ------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 339

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 340 STSNRKSPFTV 350



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 68  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 126 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 185

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 186 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 237

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 238 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 295

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 296 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 73  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 121

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 122 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 181

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 182 -IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 224

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 225 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 266


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 187/371 (50%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+  S  +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G  +    SP+ ++     PF++            V+ G  H+  ++  G I  WG    
Sbjct: 172 GFELKRQSSPQLIKSLLGIPFTQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 178/360 (49%), Gaps = 41/360 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  CS F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++      P ++  L  + +V +S G  H+ A+   G++Y WG   +GQLGL  
Sbjct: 64  GQLGHEKS---RKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +   +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P++IK L G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 177 -----KQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + +   +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN------------GQLGMG 330



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR RP    A +  ++  ++CG AHTL L + G VYA G    GQL
Sbjct: 59  GCNDLGQLG--HEKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y+  P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G V  WG    G+LG   E+       
Sbjct: 177 KQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+   + G  H+A + + G V+ FG     ++      H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT   + S G +Y++G   NG LG+G+     SP  V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKG 343



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G V+  G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++     +  L  S   +++V IS G  H++A+T +G ++ +G    GQLG    A
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            ++   P KV  L G    Q A G + + A V   G++ S+G GG+G+LG G  S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSN 334



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P +         +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------SRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWG-FA 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           VD  L   G   + R P  I  L   +  +V CG +H+  L+ G E+++WG N+ G LG+
Sbjct: 112 VDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G       SP+ ++     PF++            ++ G  H+  ++  G +  WG    
Sbjct: 172 GYEYKKQASPQIIKSLLGIPFAQ------------IAAGGAHSFVLTLSGAVFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + +SCG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V SWG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCN 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L+GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E+++WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
              +   SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 IDCNKQASPQLIKSLTGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 183/384 (47%), Gaps = 42/384 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  ++  PV   + +  S+ ALA G  H+L L   G V+A G N FGQ
Sbjct: 61  WGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQ 118

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +   S  P+++  L   VV I+ G HHS A+  DG ++ WG N++GQLG     A
Sbjct: 119 LGDGSDA-QSQVPIQVWSLNG-VVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVA 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +V+ LSG+    A  G   S+AV   GKV +WG    G+LG G          
Sbjct: 177 S--PLPVQVQGLSGVVALSA--GSTHSLAVLSDGKVKAWGDNYYGQLGDGS--------- 223

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST  +TP L+  L GVK  +A  G  HS  +  +G V  +G+    ++          P 
Sbjct: 224 STERWTPVLVSSLTGVKSVVA--GTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPV 281

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           ++  L   + +  G  H+  L S G +  WG+N++G +G G+I    +P +V G      
Sbjct: 282 VVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPG------ 335

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                  +  ++ G  H+ A+    I TW W          G  S GQLG G     + P
Sbjct: 336 ----VGRMKSIAAGGAHSLAMRADGI-TWAW----------GDDSQGQLGDGQSSQQLRP 380

Query: 403 TIVNFGENVKALQVSCGFNHTGAL 426
             V  G+ ++ + +  G  H+ AL
Sbjct: 381 ARV-LGQRIR-MPLGTGNRHSLAL 402



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 177/387 (45%), Gaps = 48/387 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN D+G++G G++  +  PV      +  +K++A GGAH+L +   G  +A G +  GQ
Sbjct: 311 WGNNDHGQVGNGTISQQLTPVQVPGVGR--MKSIAAGGAHSLAMRADGITWAWGDDSQGQ 368

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  ++    L P R+ G ++  + + TG  HS A+  DG ++ WG N+ GQLG G    
Sbjct: 369 LGDGQS-SQQLRPARVLG-QRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLP 426

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+  +V  L+G+ T  A      S+A    G V +WG    G+LG G          
Sbjct: 427 RTLPV--QVPGLAGVHTLSATT--SHSLAARADGTVWAWGDNAFGQLGDG---------T 473

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +T    P  +  L GV     ++   HS  +  +G V+ +G     ++   +G    R  
Sbjct: 474 TTQRLLPVQVPGLAGVDT--VSSMHQHSLAVSRDGTVWAWGFNGSGRL--GDGTTLSRLT 529

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     V  G  H+  L + G ++ WG N NG LG G+     SP +V G    
Sbjct: 530 PVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPG---- 585

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                  + +V ++ G  ++ A+ ++G +  WG+ G             GQLG G     
Sbjct: 586 ------LSGVVALAAGNGYSLAVDAQGSVWAWGYNGM------------GQLGDGTTTPR 627

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
           + PT       V AL  + G +H+ AL
Sbjct: 628 VTPTQAPALSGVVAL--AAGDSHSLAL 652



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 175/385 (45%), Gaps = 50/385 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+   R  PV         +  ++    H+L ++  G V+A G N  G+
Sbjct: 461 WGDNAFGQLGDGTTTQRLLPVQVPGLA--GVDTVSSMHQHSLAVSRDGTVWAWGFNGSGR 518

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+++ GL   +V ++ G  HS A+  DG ++ WG NSNG LG G    
Sbjct: 519 LGDGTTL-SRLTPVQVPGLS-SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLR 576

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  LSG+    A  G+  S+AV   G V +WG  G G+LG G          
Sbjct: 577 RLSPV--QVPGLSGVVALAAGNGY--SLAVDAQGSVWAWGYNGMGQLGDG---------T 623

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +T   TP     L GV     AAG  HS  +  +G  + +G    D+    +     R  
Sbjct: 624 TTPRVTPTQAPALSGVVAL--AAGDSHSLALRADGVAWAWGGN--DQGQLGDATTLERST 679

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P+ +  L +   +  G  H+ VL + G   +WG+N  G LG G+  +   P +V GP   
Sbjct: 680 PAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGP--- 736

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                  +++  V+ G  H+ A+ S+G +  WG  GS            G+LG G  +  
Sbjct: 737 -------SAMKGVAAGGSHSLAVRSDGTVWAWGNNGS------------GELGDGTGLQR 777

Query: 400 IHPTIVN-FGENVKALQVSCGFNHT 423
             P  V   G    A+ VS G NH+
Sbjct: 778 PRPVQVQGLGS---AVAVSAGTNHS 799



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 143/298 (47%), Gaps = 28/298 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G AH+L L   G V+A G N +GQLG    I   L P+R+  L   VV ++ GY HS
Sbjct: 42  VAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRL-PVRVQSLD-SVVALAVGYQHS 99

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N  GQLG G  A   +PI  +V  L+G+    A  G   S+A+   
Sbjct: 100 LALRSDGTVWAWGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAA--GDHHSLALLSD 155

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG   ++++   L       P  ++ L GV     +AG  HS  +  
Sbjct: 156 GSVWAWGYNAHGQLG--DDTTVASPL-------PVQVQGLSGVVAL--SAGSTHSLAVLS 204

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G+V  +GD    ++          P L+S L   + VV G +H+  L S G +  WG N
Sbjct: 205 DGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGEN 264

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
            +G LGI S      P  V G           T++  ++ G  H+ A+ S+G +  WG
Sbjct: 265 GSGQLGISSTTRRPVPVVVPG----------LTNVQALAAGSAHSLALRSDGTVRAWG 312



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 167/385 (43%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G+  SR  PV        S+ A+A G  H+L L   G V+A G N  G 
Sbjct: 511 WGFNGSGRLGDGTTLSRLTPVQVPGLS--SMVAVAAGSTHSLALRADGTVWAWGDNSNGA 568

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+++ GL   VV ++ G  +S A+   G ++ WG N  GQLG G    
Sbjct: 569 LGDGTTL-RRLSPVQVPGLSG-VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTP 626

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +V P  T+   LSG+    A  G   S+A+   G   +WG    G+LG           R
Sbjct: 627 RVTP--TQAPALSGVVALAA--GDSHSLALRADGVAWAWGGNDQGQLGDATT-----LER 677

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST    P L        V   AAG  HS  +  +G    +G+ A  ++          P 
Sbjct: 678 STPAAVPGL------AHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPV 731

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +      + V  GG H+  + S G ++ WG+N +G LG G+      P +VQG      
Sbjct: 732 QVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQG------ 785

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                 S V VS G  H+ A+ S+G +  W WGG+          S GQLG G  +    
Sbjct: 786 ----LGSAVAVSAGTNHSLAVQSDGTV--WAWGGN----------SQGQLGDGTGITRYV 829

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V+    V A  VS G  H+ AL
Sbjct: 830 PVRVSGLNGVMA--VSAGSAHSLAL 852



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 141/294 (47%), Gaps = 20/294 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  +R+ PV  S    + + A++ G AH+L L   G V+A G N +GQ
Sbjct: 811  WGGNSQGQLGDGTGITRYVPVRVSGL--NGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQ 868

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG + +    L P+++ GL   VV I+ G HHS A+  DG ++ WG N  GQLG G K  
Sbjct: 869  LGDATST-QRLVPIQVPGLTG-VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQ 926

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V  L+G+ +   A G   S+AV   G V +WG    G+LG G          
Sbjct: 927  RSPPV--QVPGLAGMVS--VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDG---------T 973

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +T    P  I    GV   IAAA   HS  +  +G V+ +G     ++     +  + P+
Sbjct: 974  TTQRLLPVPISSSSGV---IAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPT 1030

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
              S       +  G  H+  L S G ++ WG   +G LG G + +   P  V G
Sbjct: 1031 PSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAGVSG 1084



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 162/365 (44%), Gaps = 44/365 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P    A     + ALA G +H+L L   G  +A G ND GQ
Sbjct: 611 WGYNGMGQLGDGTTTPRVTPTQAPALS--GVVALAAGDSHSLALRADGVAWAWGGNDQGQ 668

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG +  +  S  P  + GL   VV ++ G  HS  +  DG    WG N+ GQLG G   +
Sbjct: 669 LGDATTLERS-TPAAVPGL-AHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGT--S 724

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+P +V   S +  K  A G   S+AV   G V +WG  GSG LG G      G  R
Sbjct: 725 TLHPVPVQVPGPSAM--KGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGT-----GLQR 777

Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 PR + +++G+   +A +AG  HS  +  +G V+ +G  +  ++    G     P
Sbjct: 778 ------PRPV-QVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVP 830

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +S L     V  G  H+  L S G ++ WG N  G LG  +      P +V G     
Sbjct: 831 VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPG----- 885

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                 T +V ++ G  H+ A+ S+G +  W            G++  GQLG G  +   
Sbjct: 886 -----LTGVVSIAAGTHHSLAVRSDGTVWAW------------GYNFYGQLGDGTKIQRS 928

Query: 401 HPTIV 405
            P  V
Sbjct: 929 PPVQV 933



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 159/364 (43%), Gaps = 42/364 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG GS      P+    +  + + A+A G  H+L L   G V+A G N  GQ
Sbjct: 111 WGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQ 168

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+++ GL   VV +S G  HS A+  DG++  WG N  GQLG G    
Sbjct: 169 LGDDTTVASPL-PVQVQGLSG-VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTE 226

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L+G+  K    G   S+A+   G V +WG  GSG+         LG   
Sbjct: 227 RWTPV--LVSSLTGV--KSVVAGTFHSLALCSDGTVRAWGENGSGQ---------LGISS 273

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P ++  L    V+  AAG  HS  +  +G V  +G+    ++     +    P 
Sbjct: 274 TTRRPVPVVVPGL--TNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPV 331

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +   + +  GG H+  + + G  + WG +  G LG G       P RV G     P
Sbjct: 332 QVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP 391

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                     +  G +H+ A+ ++G +  W            G ++ GQLG G D+    
Sbjct: 392 ----------LGTGNRHSLALHADGTVWAW------------GVNTAGQLGDGTDLPRTL 429

Query: 402 PTIV 405
           P  V
Sbjct: 430 PVQV 433



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 155/339 (45%), Gaps = 39/339 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WGN   G LG G+   R RPV        S  A++ G  H+L +   G V+A G N  GQ
Sbjct: 761  WGNNGSGELGDGTGLQRPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQ 818

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG    I   + P+R+SGL   V+ +S G  HS A+  DG ++ WG N  GQLG      
Sbjct: 819  LGDGTGITRYV-PVRVSGLNG-VMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQ 876

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +++PI  +V  L+G+ +  A  G   S+AV   G V +WG    G+LG G +       R
Sbjct: 877  RLVPI--QVPGLTGVVSIAA--GTHHSLAVRSDGTVWAWGYNFYGQLGDGTK-----IQR 927

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            S     P L   +        AAG  HS  +  NG V+ +G    +     +G   +R  
Sbjct: 928  SPPVQVPGLAGMVS------VAAGTYHSLAVHSNGTVWAWGYN--NHGQLGDGTTTQR-- 977

Query: 283  LISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             +  +P S           +H+ V+ + G ++ WGSN    LG GS     S  ++  P 
Sbjct: 978  -LLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGDGST----SDRKMPTPS 1032

Query: 339  SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
            S      +   +  +S G  H+ A+ S+G +  WG+G S
Sbjct: 1033 S------VPNGVRSISSGANHSLALRSDGTVWAWGFGNS 1065



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 39/263 (14%)

Query: 168 PTKVECL---SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           P+++E       +  +Q A G   S+ +   G V +WG    G+LG G            
Sbjct: 25  PSRIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDG---------TGI 75

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
           ++  P  ++ L+   V   A G+ HS  +  +G V+ +GD    ++       ++ P  +
Sbjct: 76  TQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQV 133

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
             L     +  G +H+  L S G ++ WG N +G LG  +      P +VQG        
Sbjct: 134 WSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG-------- 185

Query: 345 QICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
              + +V +S G  H+ A +S+GK+  WG          D +   GQLG G+  +   P 
Sbjct: 186 --LSGVVALSAGSTHSLAVLSDGKVKAWG----------DNYY--GQLGDGSSTERWTPV 231

Query: 404 IVNFGENVKALQVSCGFNHTGAL 426
           +V+    VK+  V  G  H+ AL
Sbjct: 232 LVSSLTGVKS--VVAGTFHSLAL 252



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 25/139 (17%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
           E+V  G  H+ +L S G ++ WG N  G LG G+      P RVQ             S+
Sbjct: 40  EQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQS----------LDSV 89

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
           V ++ G++H+ A+ S+G +  W WG +   F        GQLG G+D     P  V    
Sbjct: 90  VALAVGYQHSLALRSDGTV--WAWGDNF--F--------GQLGDGSDAQSQVPIQVWSLN 137

Query: 410 NVKALQVSCGFNHTGALLE 428
            V A  ++ G +H+ ALL 
Sbjct: 138 GVVA--IAAGDHHSLALLS 154


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 18/304 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+  ++ ++ CG  HT   +E    VY+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + GLK  + QI+ G  H  A+T+ GE+  WG+N NGQLGLG 
Sbjct: 97  RLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               ++P   K++    +  K  A G E + AVT  G +  WG G  G LG G  +  L 
Sbjct: 155 TEDSLLP--QKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL- 211

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  +EG K+ + A G+ H+  + ++G +Y +G     ++   +     
Sbjct: 212 --------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 263

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+ D   SP +V  P
Sbjct: 264 VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP 323

Query: 338 FSES 341
            SE+
Sbjct: 324 GSEN 327



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 159/324 (49%), Gaps = 29/324 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG     +  +  G  H
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAED-RLVPTVLSGFDAPAITSVICGADH 76

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G  +    P P K   L G+  KQ A G    +AVT
Sbjct: 77  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKA--LQGLKIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+V SWG   +G+LG G  E S+L          P+ I+  E V VK+ AAG  H+A 
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFESVCVKMIAAGAEHTAA 184

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++  G LY
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 244

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
           T+G ++ G LG G  +    P +V+    +S + QI       S GW+HT A+ SEGK+ 
Sbjct: 245 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQI-------SGGWRHTMALTSEGKLY 296

Query: 370 TWGWG--GSHGTFSEDGHSSGGQL 391
            WGW   G  G  + D HSS GQ+
Sbjct: 297 GWGWNKFGQVGVGNNDDHSSPGQV 320



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 143/312 (45%), Gaps = 43/312 (13%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           + VV +S G  HS A+     L  WG+  +GQLG G    ++  +PT +           
Sbjct: 13  QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRL--VPTVLSGFDAPAITSV 70

Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             G + + A +    +V SWG G  GRLGHG  S +         +TP+ +K L+G+K+K
Sbjct: 71  ICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV---------FTPQPVKALQGLKIK 121

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------ 295
             A G  H   +   G V  +G     ++    G      SL+ +   + E VC      
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQL----GLGTTEDSLLPQKIQAFESVCVKMIAA 177

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           G  HT  +T  G+LY WG    G LG+G  +    PE+V     E         +VLV+C
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE--------KMVLVAC 229

Query: 356 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           GW+HT  +S+ G + T+GW            S  GQLGHG+  D++ P  V   ++    
Sbjct: 230 GWRHTITVSDSGNLYTYGW------------SKYGQLGHGDFEDHLVPHKVEALKDSTIS 277

Query: 415 QVSCGFNHTGAL 426
           Q+S G+ HT AL
Sbjct: 278 QISGGWRHTMAL 289



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 26/194 (13%)

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLIS--KLPYSEEVVCG 296
           V + +AG  HS  +   G V     R  D  L       R  P+++S    P    V+CG
Sbjct: 15  VVLVSAGASHSVAL-LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICG 73

Query: 297 GYHTCVLTSGG-ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
             HT   +    ++Y+WG  + G LG G+   + +P+ V+              I  ++C
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQG--------LKIKQIAC 125

Query: 356 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H  A++  G++ +WG             +  GQLG G   D + P  +   E+V   
Sbjct: 126 GDSHCLAVTMAGEVQSWG------------RNQNGQLGLGTTEDSLLPQKIQAFESVCVK 173

Query: 415 QVSCGFNHTGALLE 428
            ++ G  HT A+ E
Sbjct: 174 MIAAGAEHTAAVTE 187



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 13/86 (15%)

Query: 344 DQICTSIVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           D    ++VLVS G  H+ A+  G +L +WG G       EDG     QLGHG+  D + P
Sbjct: 9   DSPPQTVVLVSAGASHSVALLTGNVLCSWGRG-------EDG-----QLGHGDAEDRLVP 56

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
           T+++  +      V CG +HT A  E
Sbjct: 57  TVLSGFDAPAITSVICGADHTTAYSE 82


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 172/342 (50%), Gaps = 29/342 (8%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P  C  F    ++ + CG  HT FL E G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG  S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS +   Q A G+  S+A++ GG + SWG    G+LG G       
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +   S   P+ ++ L+G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 173 -MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRC 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+ V+   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 FPALLKAL-RSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGS 376
                  + +   +  ++CG +HT A   S GK+ ++G GG+
Sbjct: 289 ------FELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGN 324



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 48/291 (16%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K E   G   +    G   +  +   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGS 112

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           D  +    F+E    R P  I  L   +  +V CG +H+  L+ GG +++WG N  G LG
Sbjct: 113 DGQLGLNNFEEC--IRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLG 170

Query: 322 IG----SIDVLHSPERVQG-PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGG 375
           +G    SI V    + +QG PF++            ++ G  H+ A++  G +  WG   
Sbjct: 171 LGMTGQSISVPQHLQSLQGIPFAQ------------IAAGGAHSFALTLSGAVFGWG--- 215

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     +  GQLG  +  D   P ++    + + + +SCG +HT AL
Sbjct: 216 ---------RNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAAL 257



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   +S   P    + +      +A GGAH+  LT +G V+  G N FG
Sbjct: 161 WGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++        L  +   + V+ IS G  H++A+T +G ++ +G    GQLG     
Sbjct: 221 QLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
            +V   P KV  L G    Q A G + ++A T   GK+ S+G GG+G+LG
Sbjct: 281 HEV--NPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL     R  P +  A     +  ++CG  HT  LT+ G V+  G   +GQ
Sbjct: 214 WGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
           LG   +  + + P ++  L   VV QI+ G  H+ A T   G++  +G   NGQLG    
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRST 332

Query: 161 AAKVIPIPTK 170
             +  P P K
Sbjct: 333 CNRKSPAPVK 342


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 176/388 (45%), Gaps = 56/388 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
           WG G+ G+LG G  E R  P V +A    +   +A    CG  HT  +  E   +Y+ G 
Sbjct: 44  WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            DFG+LG   N      P  I  L+   + QI+ G  H  A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG     ++P   K++   G+  K  A G E + AVT  G +  WG G  G LG G    
Sbjct: 163 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------ 270
            L          P  +  + G K+ + A G+ H+  +  +G +Y +G     ++      
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271

Query: 271 --LFQEGNHARRPSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGC 319
             L      A + + IS+    E +           GG     L + G+LY WG N+ G 
Sbjct: 272 DHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQ 331

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHG 378
           +G+G  +   SP +V  P  +         +V V+CGW+HT A++E K + +WG G S  
Sbjct: 332 VGVGDNEDHCSPVQVNFPNEQK--------VVQVACGWRHTLALTEAKNVFSWGRGTS-- 381

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
                     GQLGHG  VD   P +++
Sbjct: 382 ----------GQLGHGEIVDRNIPKMID 399



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 175/375 (46%), Gaps = 40/375 (10%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G +H++ L   G V + G  + GQLG  +     +  +  +        ++
Sbjct: 19  ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 78

Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +    G  H++A + +  +LY WG    G+LG G  +    P P  ++ L G+   Q A 
Sbjct: 79  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 136

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G    +AVT  G V SWG   +G+LG G  E S+L          P+ I+  EGV+VK+ 
Sbjct: 137 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 186

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTC 301
           AAG  H+A + E+G +Y +G      +   + +    P  +S +   + V+  CG  HT 
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--- 358
            ++S G +YT+G ++ G LG G  +    P +++     +   +    ++    G +   
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFR 306

Query: 359 -----HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
                  A  ++GK+  WGW            +  GQ+G G++ D+  P  VNF    K 
Sbjct: 307 VGGGIQWALAADGKLYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQKV 354

Query: 414 LQVSCGFNHTGALLE 428
           +QV+CG+ HT AL E
Sbjct: 355 VQVACGWRHTLALTE 369


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +   +CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +  CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -LDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 148/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
                  SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 LDCKKQTSPQLIKSLVGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 163/337 (48%), Gaps = 33/337 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    + RPV+  A +   +  +ACG  HT+ L+E G VY  G  D G+
Sbjct: 12  WGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGR 71

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ + +VQ + G +H++A+T  GELY WG    G+LG G ++
Sbjct: 72  LGHGDN-GWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNES 130

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P   K     G    Q A G   +V +T  GKV +WG   +G +GH          
Sbjct: 131 GHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADG----- 185

Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y PR+++ L+   V ++AA GF H+A +   G ++ +G+    ++      +   
Sbjct: 186 ---HQYLPRMLESLQAKTVTQVAACGF-HTAALTAAGEIFTWGEGKFGRLGHGMERNQMV 241

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC-----------LGIGSIDV 327
           P ++  L       V CGG+H+  +   GELYTWG  E+G            LG G +  
Sbjct: 242 PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRK 301

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           +  P  V G         +   +V V+   +HTAA++
Sbjct: 302 VSVPTLVAG--------LVKMHVVKVASYNEHTAALA 330



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 168/344 (48%), Gaps = 28/344 (8%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
           G VY+ G  + GQLG+ +       P+ +  LK K VVQ++ G  H+  ++ DG +Y WG
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           +  +G+LG G    K +P    VE L G    QA  G   + AVT  G++ +WG G  G+
Sbjct: 66  RGDDGRLGHGDNGWKYVP--RIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           LGHG ES            TP ++K L  EG +V   A G  H+  + + G+VY +GD+ 
Sbjct: 124 LGHGNESG---------HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKE 174

Query: 267 VDKMLFQEGN-HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              +     + H   P ++  L      +V   G+HT  LT+ GE++TWG  + G LG G
Sbjct: 175 NGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHG 234

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 382
                  P  V+    +         +  V+CG  H+AAI   G++ TWG GG HG    
Sbjct: 235 MERNQMVPRMVEALMGKR--------VGHVACGGFHSAAILDSGELYTWG-GGEHGQVYT 285

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+   G+LGHG+      PT+V     +  ++V+    HT AL
Sbjct: 286 FGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 37/295 (12%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
           V G +Y WG+  +GQLGLG    +  P+   V+ L      Q A G   +V ++  G V 
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVL--VDALKSKGVVQVACGSGHTVVLSEDGAVY 62

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           +WG G  GRLGHG             +Y PR+++ LEG ++  A  G  H+A + + G +
Sbjct: 63  TWGRGDDGRLGHGDNG---------WKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113

Query: 260 YIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           Y +G     K+    GN +  P+      L  +     ++ CG  HT VLT  G++YTWG
Sbjct: 114 YTWGGGMYGKL--GHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
             ENG +G  + D      R+        V Q+       +CG+   A  + G+I TWG 
Sbjct: 172 DKENGVVGHTNADGHQYLPRMLESLQAKTVTQVA------ACGFHTAALTAAGEIFTWG- 224

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               G F        G+LGHG + + + P +V      +   V+CG  H+ A+L+
Sbjct: 225 ---EGKF--------GRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILD 268


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q + G+  S+A++   +V SWG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ+S GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E+++WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 46/293 (15%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIGSIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGW 373
           G+G ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG 
Sbjct: 170 GLG-IDCKKQASPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG- 215

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                       +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 -----------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 177/393 (45%), Gaps = 43/393 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV        ++ ALA GG+H+L LT+TG V A G N  GQ
Sbjct: 62  WGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQ 121

Query: 103 LGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+ + GL     +  ++ G  HS A+T  G +  WG NSNGQLG G  
Sbjct: 122 LGDGTTTDRS-TPVTV-GLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A+  P+   +   + I    A+     S+A+T  G  L+WG+   G+LG G        
Sbjct: 180 TARSTPVTVGLPAGTTITALAAS---TYSLALTDTGAALAWGSNSRGQLGDGT------- 229

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T   TP  +    G  +   AA + HS  + + G V  +G  +  ++   +G    R
Sbjct: 230 --TTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQL--GDGTTTNR 285

Query: 281 PSLISK-LPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + ++  LP    +     G  HT VLTS G +  WGSN NG LG G+     +P  V  
Sbjct: 286 STPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGL 345

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P          T+I  ++ G+ H+ A+++ G +L WG G S+           GQLG G 
Sbjct: 346 PAG--------TTITALAAGYYHSLALTDTGAVLAWG-GNSY-----------GQLGDGT 385

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             D   P  V          +    NH  AL+ 
Sbjct: 386 TTDRSTPVTVGLPAGTTITVLVSMDNHGMALVA 418



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 145/345 (42%), Gaps = 43/345 (12%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWG 148
            V A G N  GQLG       S  P+ + GL     +  ++ G  HS A+T  G +  WG
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARS-TPVTV-GLPAGTTITALAAGGSHSLALTDTGVVLAWG 115

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            NS GQLG G    +  P+   V   +G      A G   S+A+T  G VL+WG+  +G+
Sbjct: 116 SNSRGQLGDGTTTDRSTPV--TVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQ 173

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG G          +T+  TP  +    G  +  A A   +S  + + G    +G  +  
Sbjct: 174 LGDGT---------TTARSTPVTVGLPAGTTIT-ALAASTYSLALTDTGAALAWGSNSRG 223

Query: 269 KMLFQEGNHARRPSLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +G    R + ++  LP    +  +   Y H+  LT  G +  WGSN NG LG G+
Sbjct: 224 QL--GDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGT 281

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 383
                +P  V  P          T+I  ++ G  HT  + S G +L WG           
Sbjct: 282 TTNRSTPVTVGLPAG--------TTITALAAGRSHTLVLTSAGAVLAWG----------- 322

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +S GQLG G   D   P  V          ++ G+ H+ AL +
Sbjct: 323 -SNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTD 366


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 180/371 (48%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + + +P  +  LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           + + TS   P++IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 YKKQTS---PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
              +   P  V
Sbjct: 331 TTSNRKSPFTV 341



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWI 346

Query: 337 PFS 339
           PFS
Sbjct: 347 PFS 349



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 124/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNH--ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G       SP+ ++     PF++            ++ G  H+  ++  G I  W     
Sbjct: 172 GYEYKKQTSPQMIKSLLGIPFAQ------------IAAGGAHSFVLTLSGAIFGW----- 214

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  G +  GQLG  +D D   PT++    + K + + CG +HT AL
Sbjct: 215 -------GRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAAL 257


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 183/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C+ F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++      P ++  L  + +V +S G  H+  +   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +   +P  ++ LS +   Q A G+  S+A++ G +V SWG    G+LG G +     
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + +   +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN------------GQLGMG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFPV 341



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR RP    A +  ++ A++CG AHTL L + G VYA G    GQL
Sbjct: 59  GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y+  P  I  L   ++VQ++ GY+HS A++   E++ WG+N +GQLGLG    
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S A+T  G V  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+   + G  H+A + + G V+ FG     ++      H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            + +L      ++ CG  HT   + S G +Y++G   NG LG+GS     SP  V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P +         +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG-FA 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  +V CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 ADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G  +    SP+ ++     PF +            ++ G  H+ A++  G +  WG    
Sbjct: 172 GYDLKKQTSPQLIKSLLGIPFGQ------------IAAGGAHSFALTLSGAVFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + +SCG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 180/361 (49%), Gaps = 41/361 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C+ F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++      P ++  L  + +V +S G  H+  +   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +   +P  ++ LS +   Q A G+  S+A++ G +V SWG    G+LG G +     
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + +   +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN------------GQLGMG 330

Query: 395 N 395
           +
Sbjct: 331 S 331



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR RP    A +  ++ A++CG AHTL L + G VYA G    GQL
Sbjct: 59  GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y+  P  I  L   ++VQ++ GY+HS A++   E++ WG+N +GQLGLG    
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S A+T  G V  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+   + G  H+A + + G V+ FG     ++      H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            + +L      ++ CG  HT   + S G +Y++G   NG LG+GS     SP  V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P +         +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG-FA 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  +V CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 ADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G  +    SP+ ++     PF +            ++ G  H+ A++  G +  WG    
Sbjct: 172 GYDLKKQTSPQLIKSLLGIPFGQ------------IAAGGAHSFALTLSGAVFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++    + K + +SCG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  L+ +  P +  +        +A GGAH+  LT +G V+  G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++     +  L  S   +++V IS G  H++A+T +G ++ +G    GQLG     
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            ++   P KV  L G    Q A G + + A V   G++ S+G GG+G+LG G  S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            ++ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ L+ I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
                  SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         +++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTEIACGRQHTSAFV 310


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            ++ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ L+ I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
                  SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            ++ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 167/350 (47%), Gaps = 37/350 (10%)

Query: 92  VYATGLNDFGQLGI-SENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGK 149
           VYA G  +FGQLG+ +EN  YS  P  +  L  + ++++      S A++ DG++Y WGK
Sbjct: 45  VYAWGYGNFGQLGLANENNQYS--PQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGK 102

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N  G LG     +  +  P  VE L  I  KQ + G     A++  G++ +WG    G+L
Sbjct: 103 NKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKL 162

Query: 210 GH--GQESSILGFLRSTSEYT-------PRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           GH   Q+S+ +   R    Y        P  ++ L G+K K  + G   +  + ENG VY
Sbjct: 163 GHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVY 222

Query: 261 IFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            FG+    ++ +Q E     +P  I  L     + CG   +  ++S G++YTWG+N++G 
Sbjct: 223 SFGNSMKGQLGYQSEETGNFQPKKIPDLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQ 282

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
           LG         P +V G F           I+ +SCG    AA+S EGK+ TWG+G    
Sbjct: 283 LGNNQSIYQARPNQVTG-FG-------GNKIINISCGDNFIAALSNEGKLFTWGYGND-- 332

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                     GQLGH N  D   P  + F E  K ++V CG  HT  L +
Sbjct: 333 ----------GQLGHSNRNDLYAPKQIEFKE--KIIKVDCGGTHTAFLTQ 370



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 207/423 (48%), Gaps = 56/423 (13%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
            + T  ++    WG G++G+LGL +  +++ P         ++  +    + ++ L++ G
Sbjct: 36  FTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDG 95

Query: 91  CVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
            VY  G N  G LG  +   +++ +P  +  L+  ++ QIS G  H +AI+ DGELY WG
Sbjct: 96  KVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWG 155

Query: 149 KNSNGQLG--LGKKAAKV--------------IPIPTKVECLSGIFTKQAALGFEQSVAV 192
              +G+LG  + +K+ KV                +PTKV+ L+GI  KQ + G + +V +
Sbjct: 156 NKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVL 215

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V S+G    G+LG+  E         T  + P+ I +L+ + + I   G   SA 
Sbjct: 216 TENGEVYSFGNSMKGQLGYQSE--------ETGNFQPKKIPDLQNI-INI-DCGQQFSAA 265

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           +  +G+VY +G+    ++   +  +  RP+ ++    ++   + CG      L++ G+L+
Sbjct: 266 VSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLF 325

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
           TWG   +G LG  + + L++P++++  F E         I+ V CG  HTA +++   L 
Sbjct: 326 TWGYGNDGQLGHSNRNDLYAPKQIE--FKE--------KIIKVDCGGTHTAFLTQNNQLY 375

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVD-----YIHPTIVNFGENVKALQVSCGFNHTGA 425
                        G  + GQLG G +++        P IV F + +K + V+CG  +T A
Sbjct: 376 LF-----------GRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLA 424

Query: 426 LLE 428
           + E
Sbjct: 425 ITE 427


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 181/371 (48%), Gaps = 47/371 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA ++H + ++ CG  HT+  +++   VY+ G  DFG
Sbjct: 35  WGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFG 94

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L   ++ QI+ G  H  A+T+DGE+  WG+N NGQLGLG  
Sbjct: 95  RLG-HGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNT 153

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  W  G   + G    +  L F
Sbjct: 154 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWKFGISDRNDRL-F 209

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           L+   EY    +++++G  ++   +  L S        +Y++ ++      ++ G     
Sbjct: 210 LK---EYLC-CVRDVDGAVMQPHISFLLWSI-------IYLWMEQIWPTRTWRLGG---S 255

Query: 281 PSLISKLPYSEEV----VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           P  ++    S       + GG+ HT  LTS G+LY WG N+ G +G+G+     SP +V+
Sbjct: 256 PCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVR 315

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            P  +         +V VSCGW+HT A++E   +  WG G            + GQLG G
Sbjct: 316 FPDDQ--------KVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIG 355

Query: 395 NDVDYIHPTIV 405
             +D   P I+
Sbjct: 356 ESLDRNSPNII 366



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 167/373 (44%), Gaps = 71/373 (19%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +    S  P ++S L + ++V ++ G  H
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRS-SPTQLSALDEHQIVSVTCGADH 74

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    E+Y WG    G+LG G  +    P+P K   L G+  KQ A G    +AVT
Sbjct: 75  TVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGVMIKQIACGDSHCLAVT 132

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 183

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE----- 308
            E+G +Y +     D  +++ G   R   L  K     E +C     CV    G      
Sbjct: 184 TEDGDLYGW-----DGKIWKFGISDRNDRLFLK-----EYLC-----CVRDVDGAVMQPH 228

Query: 309 --------LYTWGSN----ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
                   +Y W           LG GS   L + +R    F              +S G
Sbjct: 229 ISFLLWSIIYLWMEQIWPTRTWRLG-GSPCFLTNWKRSATAF-----------FSQISGG 276

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
           W+HT  + S+GK+  WGW            +  GQ+G GN++D   P  V F ++ K +Q
Sbjct: 277 WRHTMPLTSDGKLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ 324

Query: 416 VSCGFNHTGALLE 428
           VSCG+ HT A+ E
Sbjct: 325 VSCGWRHTLAVTE 337



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 108/265 (40%), Gaps = 71/265 (26%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
            ++   ++V+ IS G  HS A+     +  WG+  +GQLG G   A+    PT++  L  
Sbjct: 5   EVTPPPRKVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGD--AEDRSSPTQLSALDE 62

Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                   G + +VA +    +V SWG G  GRLGHG  S +         +TP  IK L
Sbjct: 63  HQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 113

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
            GV +                                                  +++ C
Sbjct: 114 HGVMI--------------------------------------------------KQIAC 123

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           G  H   +T  GE+ +WG N+NG LG+G+ +    P+++Q  F           I +V+ 
Sbjct: 124 GDSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQA-FE-------GIRIKMVAA 175

Query: 356 GWKHTAAISEGKILTWGWGGSHGTF 380
           G +HTAA++E   L +GW G    F
Sbjct: 176 GAEHTAAVTEDGDL-YGWDGKIWKF 199



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 4/104 (3%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTG 131
              ++ G  HT+ LT  G +Y  G N FGQ+G+  N+     P+++     ++VVQ+S G
Sbjct: 270 FSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLD-QCSPVQVRFPDDQKVVQVSCG 328

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           + H+ A+T    ++ WG+ +NGQLG+G+   +    P  +E LS
Sbjct: 329 WRHTLAVTERNNVFAWGRGTNGQLGIGESLDR--NSPNIIEALS 370



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 26/195 (13%)

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSE--EVVC 295
           KV I +AG  HS  +  +G V     R  D  L       R  P+ +S L   +   V C
Sbjct: 12  KVLIISAGASHSVAL-LSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTC 70

Query: 296 GGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           G  HT   + S  E+Y+WG  + G LG G+   L +P  ++              I  ++
Sbjct: 71  GADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHG--------VMIKQIA 122

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  H  A++ +G++ +WG             +  GQLG GN  D + P  +   E ++ 
Sbjct: 123 CGDSHCLAVTMDGEVQSWG------------RNQNGQLGLGNTEDSLVPQKIQAFEGIRI 170

Query: 414 LQVSCGFNHTGALLE 428
             V+ G  HT A+ E
Sbjct: 171 KMVAAGAEHTAAVTE 185



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G++G+G+   +  PV     +   +  ++CG  HTL +TE   V+A G    GQ
Sbjct: 292 WGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 351

Query: 103 LGISENIGYS----LEPLRISGLKKEVVQIST 130
           LGI E++  +    +E L + G   + ++ S+
Sbjct: 352 LGIGESLDRNSPNIIEALSVDGASGQHIESSS 383


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         +++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTEIACGRQHTSAFV 310


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            ++ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         +++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTEIACGRQHTSAFV 310


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG  H+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            ++ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            ++ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 186/397 (46%), Gaps = 48/397 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+ +YG+LG    ES   P ++ S +  + +K + CGG H+  +T +G +   G    G
Sbjct: 13  WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+ +     +   R+    K V+ +S    HS+AI  DG LY WG N +G+LG+G   
Sbjct: 73  QLGLGDLKDIVIP--RVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLN 130

Query: 162 AKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             +       P  VE L      + + G   +  +T   K  +WG G  GRLGHG  + +
Sbjct: 131 VNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDV 190

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    YTP+LI+ L G+ VK    G  H+A +  NG+VY  G  A  K+ F     
Sbjct: 191 ---------YTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKED 241

Query: 278 ARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              P L+     +   +EV  G  H+ V+T+ G++YTWG  + G LG     + + PE  
Sbjct: 242 IYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG--QGGRLG----HIYNGPE-- 293

Query: 335 QGPFSESP--VDQICTSI-VLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             P   SP  V+++ + I V +SCG  HT  IS  G +  WG                  
Sbjct: 294 --PDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWG--------------VTRN 337

Query: 391 LGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           LGHG  D     PT+    +N   +QVSCG  HT AL
Sbjct: 338 LGHGVIDSKPNDPTLHPILQNKNIVQVSCGKTHTIAL 374



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 171/341 (50%), Gaps = 39/341 (11%)

Query: 92  VYATGLNDFGQLG-ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWG 148
           V A G +++GQLG I E    ++EP  I  L     + ++  G HHS+ IT  GEL +WG
Sbjct: 10  VVAWGSSEYGQLGAIYEE--SNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
               GQLGLG    K I IP  +  +  +     +     S A+   G++ +WG   SG+
Sbjct: 68  YGGCGQLGLGD--LKDIVIPRVMTSIKNVI--NVSCSDRHSAAILEDGRLYTWGCNKSGK 123

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG G   S+   L +    TP+L+++L   KV   + G  H+AC+ +  + Y +G     
Sbjct: 124 LGIG---SLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQG 180

Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++   + N    P LI  L     + +VCGG+HT +L + G++Y  G    G LG GS +
Sbjct: 181 RLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKE 240

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
            ++ P+ +QG  +   + +       VS G++H+A I ++GK+ TWG             
Sbjct: 241 DIYIPKLLQGSLTNKSIKE-------VSLGYQHSAVITTKGKVYTWG------------- 280

Query: 386 SSGGQLGH---GNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
             GG+LGH   G + D + P +V    ++ A+ +SCG +HT
Sbjct: 281 -QGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHT 320



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WG G  GRLG G     + P +  +    S+K + CGG HT  L   G VY  G   
Sbjct: 171 AYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGA 230

Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG- 156
           FG+LG    E+I Y  + L+ S   K + ++S GY HS+ IT  G++Y WG+   G+LG 
Sbjct: 231 FGKLGFGSKEDI-YIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQ--GGRLGH 287

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           +       I  P  VE L+ I     + G   +V ++  G V +WG   +  LGHG
Sbjct: 288 IYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGV--TRNLGHG 341



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 37/239 (15%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDEN 256
           V++WG+   G+LG   E S            P+LI+ L    ++K    G  HSA I  +
Sbjct: 10  VVAWGSSEYGQLGAIYEES---------NIEPKLIESLYSFNRIKEVCCGGHHSAVITHS 60

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G + ++G     ++   +      P +++ +     V C   H+  +   G LYTWG N+
Sbjct: 61  GELIVWGYGGCGQLGLGDLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNK 120

Query: 317 NGCLGIGSIDVLH------SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
           +G LGIGS++V        +P+ V+   +E         ++ VSCG  HTA +++  K  
Sbjct: 121 SGKLGIGSLNVNLNNNIICTPQLVEKLLNEK--------VIKVSCGSFHTACLTDLNKAY 172

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           TWG G              G+LGHG+  D   P ++     +    + CG +HT  LL 
Sbjct: 173 TWGLGMQ------------GRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLN 219


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++  G+   WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 148/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++ +GE + WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 121/290 (41%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+  GE + WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
            ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG    
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG  H+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  145 bits (366), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 119/396 (30%), Positives = 175/396 (44%), Gaps = 49/396 (12%)

Query: 43  WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+    +LG    G  +S+  P     F    + +++CG  ++  LTE G VY  G   
Sbjct: 593 WGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGS 652

Query: 100 FGQLGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                +S     SLE    P ++  L  EVV +S GY+HS+A+  +GEL  WG   +GQL
Sbjct: 653 VKNPPLSTLGNGSLEDQLLPTKVESLS-EVVLVSIGYYHSAALKSNGELLTWGCGEDGQL 711

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G    +   IP  V+ ++  +  Q   G + ++ +T  GKV +WG    G+LG G   
Sbjct: 712 GHGDVLNQT--IPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD-- 767

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +    TP L+  LE   +   A G  H A +     V +FG+ A         
Sbjct: 768 -------TQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAA----MGSA 816

Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           N    P ++  L +   E + CG Y T  LT  G++YTWGS +   LG G+      P+ 
Sbjct: 817 NIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQE--LGHGTNQSELHPKL 874

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G  S+        SI  +SCG +H A +++ GKI T             G    GQLG
Sbjct: 875 VDGLRSQ--------SIRQISCGGRHMAFLTDSGKIYTC------------GKDPFGQLG 914

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           H    D   P  ++       + VSCG NH  +L +
Sbjct: 915 HAQG-DQNKPKKIDSLLKTTFISVSCGENHNASLFD 949


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 178/371 (47%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P +IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  +++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
              +   P  V
Sbjct: 331 TTSNRKSPFTV 341



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 123/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G      +SP  ++     PF++            ++ G  H+  ++  G I  WG    
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  +D D   PT++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 178/371 (47%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P +IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  +++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
              +   P  V
Sbjct: 331 TTSNRKSPFTV 341



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 123/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G      +SP  ++     PF++            ++ G  H+  ++  G I  WG    
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  +D D   PT++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 178/371 (47%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P +IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  +++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
              +   P  V
Sbjct: 331 TTSNRKSPFTV 341



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 123/290 (42%), Gaps = 46/290 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 G-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G      +SP  ++     PF++            ++ G  H+  ++  G I  WG    
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQ------------IAAGGAHSFVLTLSGAIFGWG---- 215

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    +  GQLG  +D D   PT++      K + + CG +HT AL
Sbjct: 216 --------RNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG  H+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 S-IDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           +      SP+ ++     PF +            V+ G  H+  ++  G I  WG     
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 183/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+   G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343

Query: 337 ---PFS-ESPVD 344
              P++ + P D
Sbjct: 344 NWFPYNGQCPTD 355



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           I  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   ++
Sbjct: 184 IKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 161/299 (53%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4033 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4092

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4093 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4151

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G+   Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4152 TSNK--KLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGN----- 4204

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4205 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4260

Query: 278  ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP L+  L   + +++  G  HT  L++ GE+Y WGSN  G LG+G  + +  P  V
Sbjct: 4261 -NRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLV 4318



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 169/342 (49%), Gaps = 38/342 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +G+LG   N      P  I G    K VV +S GY HS+A+T DGELY WG+   G+LG 
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
           G   ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + 
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +         Y P++++ L+G+  +   AG   S  +   G+VY +G  A       E  
Sbjct: 602 V---------YKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPER 333
            A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
           V G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 712 VSG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4087 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4146

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+   + Q++ G +H+ A++ DG L + +G    G+LGLG  
Sbjct: 4147 LGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNS 4205

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4206 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4255

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+L+  L G+ +   A G  H+  +  +G VY +G  +  ++     NH R 
Sbjct: 4256 -RARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVRE 4314

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4315 PTLVTAL 4321



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 171/378 (45%), Gaps = 51/378 (13%)

Query: 86  LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPCFSDAQTIEAGQYCTFVISTDGS 423

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
           +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y 
Sbjct: 484 DGDYGKLGHGN---------SSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYT 534

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
           +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594

Query: 321 GIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVS--------------CGWKHTAA- 362
           G G  + ++ P   E +QG F+        +S+ L S              CG     A 
Sbjct: 595 GHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL 654

Query: 363 -------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HPTIVNF 407
                  ++  +I+    G SH    S D      G++S GQ G GN    I  P  V+ 
Sbjct: 655 RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSG 714

Query: 408 GENVKALQVSCGFNHTGA 425
            + V   Q+S G +H+ A
Sbjct: 715 LDGVAIQQISAGTSHSLA 732



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 173/394 (43%), Gaps = 47/394 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3982 LWGAGRHGQLAEAG-RNVMIPSGAGSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4038

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4039 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4097

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4098 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4154

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG+ +   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4155 --------KKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNST 4206

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+ V
Sbjct: 4207 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLV 4266

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                   PV  +   I  ++ G +HT A+S  G++  WG             +S GQLG 
Sbjct: 4267 -------PV-LLGIFIDDIAVGAEHTLALSASGEVYAWG------------SNSEGQLGL 4306

Query: 394  GNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4307 GHTNHVREPTLVTALQGKNIR--QISAGRCHSAA 4338



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+FT++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 129/290 (44%), Gaps = 39/290 (13%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +GQL    +A + + IP+     S    +Q   G   +  +   G VL+ G
Sbjct: 3979 DVFLWGAGRHGQLA---EAGRNVMIPSGAGSFSQ--AQQVICGQNCTFVIQANGTVLACG 4033

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 4034 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4084

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+G+ +
Sbjct: 4085 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4143

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
             G LG+G+      PERV               I  V+CG  HT A+S    L W +G  
Sbjct: 4144 YGRLGLGNTSNKKLPERVTALEG--------LHIGQVACGLNHTLAVSADGSLVWAFG-- 4193

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  DG    G+LG GN      P  V+    +   +V+CG   + AL
Sbjct: 4194 ------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4235



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +    + +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+     ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 183/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+   G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343

Query: 337 ---PFS-ESPVD 344
              P++ + P D
Sbjct: 344 NWFPYNGQCPTD 355



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           I  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   ++
Sbjct: 184 IKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         Q++CG  HT A +
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 180/371 (48%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG    GQ+GL  
Sbjct: 64  GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A + I +P  ++ LS +   Q A G   S+A++    + SWG    G+LG G       
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++++   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 VPALLKSL-RSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           + ++   P  V
Sbjct: 331 STINRKSPFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G   +GQ+
Sbjct: 59  GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ D +++ WG+N  GQLGLG +  
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     NH   P 
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G   
Sbjct: 64  GQLGHDK-----------SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAV 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L     + R P  I  L   +  +V CG +H+  L+   ++++WG N+ G LG+G
Sbjct: 113 YGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
             I    +P  ++     PF+             ++ G  H+ A++  G I  WG     
Sbjct: 173 LEIKKECAPRHIKSLSGIPFAH------------IAAGGGHSFALTISGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAAL 257


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 177/370 (47%), Gaps = 39/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG    GQ+GL  
Sbjct: 64  GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A + I +P  ++ LS +   Q A G   S+A++    + SWG    G+LG G       
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+L+  L   +   + CG  HT  LT  G ++T+G+   G LG  S +   +P +V   
Sbjct: 232 VPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--- 288

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                 + + + +  ++CG +HT A   S G+I ++G GG+            GQLG G+
Sbjct: 289 -----FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGTGS 331

Query: 396 DVDYIHPTIV 405
            ++   P  V
Sbjct: 332 TINRKSPFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G   +GQ+
Sbjct: 59  GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ D +++ WG+N  GQLGLG +  
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     NH   P 
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 44/289 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G   
Sbjct: 64  GQLGHDK-----------SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAV 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L     + R P  I  L   +  +V CG +H+  L+   ++++WG N+ G LG+G
Sbjct: 113 YGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172

Query: 324 -SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
             I    +P  ++     PF+             ++ G  H+ A++  G I  WG     
Sbjct: 173 LEIKKECAPRHIKSLSGIPFAH------------IAAGGGHSFALTISGAIFGWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -------RNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAAL 257


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 183/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + + + +  ++CG +HT+    S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGN------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P  V
Sbjct: 331 STSNRKSPFTV 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT     S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 68/328 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQ----------------------ESSILGFLRSTSEY----------------- 227
           G+LGH +                      E+  L        Y                 
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEE 123

Query: 228 ---TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSL 283
               PR IK L  +++   A G+ HS  + +   V+ +G     ++ L  +      P L
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQL 183

Query: 284 ISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +  L   P+  +V  GG H+ VLT  G ++ WG N+ G LG+   +  + P  ++   S+
Sbjct: 184 LKSLLGIPFM-QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV + CG  HTAA++ EG + T+G GG             GQLGH +    
Sbjct: 243 --------KIVYICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHE 282

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
           I+P  V         +++CG  HT   +
Sbjct: 283 INPRKVFELMGSIVTEIACGRQHTSTFV 310


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 167/331 (50%), Gaps = 28/331 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG  + ++R  PV  +      + ++  G  H+L +   G V+A G N  GQ
Sbjct: 122 WGNNAYGQLGDDTRDNRTVPVQVTGLS--GVVSVVAGDTHSLAVRSDGSVWAWGRNTSGQ 179

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P++++GL   VV ++ G +HS A+  DG ++ WG N++GQLG   +AA
Sbjct: 180 LGDGTRDDRAV-PVQVTGLSG-VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAA 237

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +VE +SG+     A G   S+AV   G V +WG    G+LG G+       L 
Sbjct: 238 --YPVPWRVEDVSGVVA--VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGK-------LE 286

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             S + P+ +  L GV     +AGF HS  +  +G V+ +G+ A  ++      HA  P 
Sbjct: 287 GNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPV 344

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +  +  V  G  H+ V+ S G L+ WGSN +G  G G++    +P RV G      
Sbjct: 345 QVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPG------ 398

Query: 343 VDQICTSIVLVSCGWKHT-AAISEGKILTWG 372
                + +V V+ G  H  A +S+G +  WG
Sbjct: 399 ----LSGVVSVAAGGGHVLALLSDGTVWAWG 425



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 152/348 (43%), Gaps = 37/348 (10%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           ++A GG H L L   G V+A G N  GQLG        + P ++  L   VV ++ G   
Sbjct: 404 SVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWV-PRQVPELSG-VVAVAAGSSF 461

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+  DG ++ WG N+ GQLG G   A  +P+   V  LS +     A G   ++AV  
Sbjct: 462 SLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPL--HVRELSEVVA--VAAGSMHALAVRA 517

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V  WG    G+LG G E        S   Y+P  +  L G+ V +AA  F HS  + 
Sbjct: 518 DGTVWGWGFNDYGQLGDGFEGI------SARRYSPVQVPGLSGM-VSVAAD-FGHSLAVR 569

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWG 313
            +G V+ +G+   D  L       R   L    P +  ++  GY ++  + + G L+ WG
Sbjct: 570 ADGTVWAWGNN-TDSELGDGTTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWAWG 628

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
           +N  G LG GS      P RVQGP   S           ++ G  H+ A+     L W W
Sbjct: 629 TNFAGQLGDGSTTSRAVPVRVQGPVRAS----------TLAAGQSHSMAVGSDGFL-WAW 677

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
           G     F+ +     GQLG G    +  P  V     V A+ V+   +
Sbjct: 678 G-----FNFE-----GQLGDGTLTHHALPVRVPGMSGVVAVDVTLNLS 715



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 157/352 (44%), Gaps = 58/352 (16%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L +   G V+ TG N  GQLG    +     P+++ GL   V  ++ G+ HS A+  D
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRR-TPVQVQGLSG-VAAVAAGHGHSLALRYD 116

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G ++ WG N+ GQLG   +  + +P+  +V  LSG+ +  A  G   S+AV   G V +W
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTVPV--QVTGLSGVVSVVA--GDTHSLAVRSDGSVWAW 172

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   SG+LG G                P  +  L GV V +AA G  HS  +  +G V+ 
Sbjct: 173 GRNTSGQLGDGTRD---------DRAVPVQVTGLSGV-VSVAAGGN-HSLAVRSDGSVWA 221

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEE-------VVCGGYHTCVLTSGGELYTWGS 314
           +G+ A        G     P     +P+  E       V  G YH+  +   G ++ WG 
Sbjct: 222 WGNNA-------SGQLGGAPEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGD 274

Query: 315 NENGCLGIGSI--DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           N  G LG G +  +    P++V G             +V VS G+ H+  + S+G +  W
Sbjct: 275 NLYGQLGDGKLEGNSRWLPKQVPG----------LGGVVAVSAGFYHSLVVRSDGTVWAW 324

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
                       G+++ GQLG G+      P  V  G +  A+ V+ G+ H+
Sbjct: 325 ------------GNNAYGQLGGGSRAHAASPVQV-LGVS-GAVAVAAGYRHS 362



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 28/285 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GS ++    V     E   + A+A G  H L +   G V+  G ND+GQ
Sbjct: 474 WGDNAYGQLGHGSTDAS--SVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQ 531

Query: 103 LGIS-ENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   E I      P+++ GL   +V ++  + HS A+  DG ++ WG N++ +LG G  
Sbjct: 532 LGDGFEGISARRYSPVQVPGLSG-MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTT 590

Query: 161 AAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             +++P+    P  V  LS         G+  S+A+   G + +WG   +G+LG G    
Sbjct: 591 TRRLVPLRVNAPGTVALLSA--------GYNYSMAMRADGSLWAWGTNFAGQLGDGS--- 639

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 +TS   P  ++    V+    AAG  HS  +  +G ++ +G     ++      
Sbjct: 640 ------TTSRAVP--VRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLT 691

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           H   P  +  +     V      +  + S G L+ WG+N+ G LG
Sbjct: 692 HHALPVRVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 8/182 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN     LG G+   R  P+  +A    ++  L+ G  +++ +   G ++A G N  GQ
Sbjct: 577 WGNNTDSELGDGTTTRRLVPLRVNA--PGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQ 634

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+R+ G  +    ++ G  HS A+  DG L+ WG N  GQLG G    
Sbjct: 635 LGDGSTTSRAV-PVRVQGPVRAST-LAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTH 692

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+  +V  +SG+      L    S+AV   G + +WG    G+LG    + +   +R
Sbjct: 693 HALPV--RVPGMSGVVAVDVTLNL--SLAVRSDGSLWAWGNNDVGQLGTQPSTYVTTAVR 748

Query: 223 ST 224
           S+
Sbjct: 749 SS 750



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 38/241 (15%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S+AV   G V + G  G G+LG G          + S  TP  ++ L GV     AAG 
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGT---------TLSRRTPVQVQGLSGVAA--VAAGH 107

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
            HS  +  +G V+ +G+ A  ++     ++   P  ++ L     VV G  H+  + S G
Sbjct: 108 GHSLALRYDGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLSGVVSVVAGDTHSLAVRSDG 167

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEG 366
            ++ WG N +G LG G+ D    P +V G           + +V V+ G  H+ A+ S+G
Sbjct: 168 SVWAWGRNTSGQLGDGTRDDRAVPVQVTG----------LSGVVSVAAGGNHSLAVRSDG 217

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK-ALQVSCGFNHTGA 425
            +  W            G+++ GQLG   +  Y  P  V   E+V   + V+ G  H+ A
Sbjct: 218 SVWAW------------GNNASGQLGGAPEAAYPVPWRV---EDVSGVVAVAAGQYHSLA 262

Query: 426 L 426
           +
Sbjct: 263 V 263


>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 383

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 189/384 (49%), Gaps = 37/384 (9%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE 114
           S +RP + ++ +  S++ +ACG   TLF+T+ G VY++G+  +GQLG   + E  G +L 
Sbjct: 19  SVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL- 77

Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
              I  + ++V+  + G  HS  +T  G LY  G    G+LGLG   ++ +  P  VE L
Sbjct: 78  ---IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESL 133

Query: 175 SGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSE 226
           +    K  + A G   S+A++  GKV S+G+   G LGHG+    + FL          E
Sbjct: 134 AREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNME 192

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            +PRLI+ LE  +++  + G  H+  I++ G  + +G             +  +P  +  
Sbjct: 193 TSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252

Query: 287 LPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
           LP   +++V GG HT  LT GG+++ WG N  GCLG+G         R+     E  + Q
Sbjct: 253 LPGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRI----VEKLLQQ 308

Query: 346 ICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
               I  ++ GW  + A+ SEG + +WG           GH+  G LG G + D   P  
Sbjct: 309 AKEPIQWIAAGWFFSMAVDSEGYVYSWG----------RGHA--GALGTGEEEDKWEPVA 356

Query: 405 VNF--GENVKALQVSCGFNHTGAL 426
           +    GE ++  ++  GFN+  A+
Sbjct: 357 IQNEQGEPLQVDRIYAGFNYAIAV 380



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 29/218 (13%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +TS Y P+++  L+   ++  A G   +  + + G+VY  G     ++           +
Sbjct: 17  ATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGIT 76

Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHSPERVQGPF 338
           LI  +P  E+V+    G  H+  +T  G LY+ G  + G LG+G+I   + +P+ V+   
Sbjct: 77  LIDSIP--EKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLA 134

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG----- 392
            E         I+ V+ G   + A+SE GK+ ++G        + DGH   G++      
Sbjct: 135 REE------EKIIKVAAGHGFSIALSESGKVYSFG-------SANDGHLGHGEVPGGIFL 181

Query: 393 ----HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               H +      P ++   E  +   +SCG  H  A+
Sbjct: 182 WEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAI 219


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 158/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4115 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4173

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   +VAV T G  V ++G G  G+LG G      
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4226

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4227 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  +  L   + E++  G  HT  L+S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4283 -NRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4340



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 166/341 (48%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++ IP   K      I   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRNIPTLVK----DIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 GG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4168

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4227

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4228 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4278 -RARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4336

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4337 PTLVTVL 4343



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 171/397 (43%), Gaps = 53/397 (13%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F     + + CG   T  +   G V A G   +G
Sbjct: 4004 LWGAGRHGQLAEAG-RNVMIPAAAPSFSPA--QQVVCGQNCTFVIQANGTVLACGEGSYG 4060

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4061 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4119

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4120 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4176

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4177 --------KKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNST 4228

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4229 AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4288

Query: 335  Q---GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
                G F E            ++ G +HT A+S  G +  WG             +S GQ
Sbjct: 4289 PLLAGVFIED-----------IAVGAEHTLALSSTGDVYAWG------------SNSEGQ 4325

Query: 391  LGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            LG G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4326 LGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4360



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 173/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V   + +   Q+S G +H+ A
Sbjct: 710 KKVGGLDGIAIQQISAGTSHSLA 732



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSP- 4031

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4032 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+T+ G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4141 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4192

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4193 QVACGLNHTVAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDILCGI 4242

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4243 GIKKVACGTQFSVAL 4257



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 22/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
           +LG  ++   +     I  L K+++   ++S G  H+ A++ DG  ++ +G   NG+LG 
Sbjct: 542 RLGHGDSNSRN-----IPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G      +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS 
Sbjct: 597 GD--TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSE 650

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
              LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 651 ATALR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVGGLDGIAIQQISAGTSHS 730



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L S    ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G V+ ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4279 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337

Query: 336  G 336
            G
Sbjct: 4338 G 4338



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTGL 4339



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV-YIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G V + FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4284

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4285 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4322

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4323 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4356



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4188

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4189 QVACGLNHTLAVSADGSVVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4238

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4239 GIKKVACGTQFSVAL 4253



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 179/371 (48%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG  ++GQ+G+  
Sbjct: 64  GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A   I +P  ++ LS I   Q A G   S+A++    + SWG    G+LG G E     
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++++   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + +   +  ++CG +HT A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGIG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P++V
Sbjct: 331 STSNKKSPSMV 341



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G    GQ+
Sbjct: 59  GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ +  +Y WG+N  GQLGLG +  
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT   + S G +Y++G   NG LGIGS     SP  V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 34/287 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +V+  P + +       +    G   +  V   G V + G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G
Sbjct: 61  NDLGQLGHDK-----------SRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++ +    ++ R P  I  L   +  +V CG +H+  L+    +Y+WG N+ G L
Sbjct: 110 HAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQL 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGT 379
           G+GS     S  R     S  P   I       + G  H+ A++  G I  WG       
Sbjct: 170 GLGSEKRKESAPRHIKSLSGIPFAHI-------AAGGGHSFALTISGAIFGWG------- 215

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 -----RNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 157/296 (53%), Gaps = 21/296 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   +VAV T G  V ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              RP  +  L   + E++  G  HT  L+S G++Y WGSN  G LG+G  + +  P
Sbjct: 4279 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREP 4333



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  SI  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGV--SIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4333 PTLITVL 4339



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 173/397 (43%), Gaps = 53/397 (13%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   PV   +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPVAAPSFSQ--AQQVVCGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4225 AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4284

Query: 335  ---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
                G F E            ++ G +HT A+S  G +  WG             +S GQ
Sbjct: 4285 PVLSGVFIED-----------IAVGAEHTLALSSTGDVYAWG------------SNSEGQ 4321

Query: 391  LGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            LG G+      PT++    G+N++  Q+S G  H+ A
Sbjct: 4322 LGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4356



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W----------- 357
           LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W           
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 358 -------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
                  K    ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + V   Q+S G +H+ A
Sbjct: 710 KKVSGLDGVSIQQISAGTSHSLA 732



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+T+ G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4137 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4188

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4189 QVACGLNHTVAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDILCGI 4238

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4239 GIKKVACGTQFSVAL 4253



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
             +   P KV  L G+  +Q + G   S+A T      +V++W       L    E S  
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758

Query: 219 GFLRSTSEY 227
             LRS  E+
Sbjct: 759 SHLRSFLEH 767



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 188/394 (47%), Gaps = 46/394 (11%)

Query: 43  WGNGDYGRLGLG-------------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET 89
           WG+ D+GR G G               E   +PV+ +      +K +ACGGAH++ +TE+
Sbjct: 67  WGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKL----IKKVACGGAHSMIVTES 122

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           G +   GLND GQLG+  N+  + E   + G  + +  ++ G+ H+ A +  G+LY WG 
Sbjct: 123 GRLLTCGLNDNGQLGLG-NLENASEFEEVKG-TESIADVAAGFWHTLAASKKGKLYAWGS 180

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLG    A K+   P ++  L     KQ A G   S+A+T  G+V +WG G  GRL
Sbjct: 181 NKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRL 240

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG          +  E+ P+ ++ L G  +    AGF +S+ +  +G+V+++G      
Sbjct: 241 GHGS---------TEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHF-Y 290

Query: 270 MLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
           +L Q     +   ++   P S  ++  G +H   ++  G L+TWG   +G LG G    L
Sbjct: 291 VLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG----L 346

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 388
            SP  +  P       Q+  S   V+CG +HT  ++          G+   FS       
Sbjct: 347 KSPNIILEPTVLDAPAQLQNS-KQVACGSQHTLVVT----------GTGDVFSFGL-GGQ 394

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           GQLG G+D+D+  P  +         QV+CG  H
Sbjct: 395 GQLGLGSDLDHYEPKQIPRFVGKSLRQVACGLFH 428



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 31/249 (12%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           G EQ V + G   + SWG+   GR G G   ++ I   ++   E   + +  L    +K 
Sbjct: 51  GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPV--LPAKLIKK 108

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            A G  HS  + E+GR+   G     ++      +A     +       +V  G +HT  
Sbjct: 109 VACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADVAAGFWHTLA 168

Query: 303 LTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
            +  G+LY WGSN++G LG    ++ +   P+ +     ++P+ Q       V+CG  H+
Sbjct: 169 ASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEIL-LLRDAPIKQ-------VACGSYHS 220

Query: 361 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVS 417
            A++ +G++ TWG+G              G+LGHG+  D   P  V    GEN+ ++   
Sbjct: 221 MALTKDGEVYTWGFGAH------------GRLGHGSTEDEFMPKRVEALVGENISSIH-- 266

Query: 418 CGFNHTGAL 426
            GF ++ A+
Sbjct: 267 AGFEYSSAV 275


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2564

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 2565 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2623

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 2624 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2676

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 2677 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2732

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 2733 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 2791

Query: 336  G 336
            G
Sbjct: 2792 G 2792



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 2559 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2618

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 2619 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2677

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 2678 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2727

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 2728 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 2786

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 2787 PTLVTGL 2793



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 2454 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 2510

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 2511 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 2569

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 2570 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 2626

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 2627 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 2678

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 2679 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 2738

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 2739 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 2776

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 2777 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 2810



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 2426 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2481

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 2482 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2531

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 2532 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2590

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 2591 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 2642

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 2643 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 2692

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 2693 GIKKVACGTQFSVAL 2707


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 161/299 (53%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4127 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4186

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4187 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4245

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P KV  L G    Q A G   ++ V+  G ++ ++G G  G+LG G      
Sbjct: 4246 TSNK--KLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGN----- 4298

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G+V+ FG DR +     +  NH
Sbjct: 4299 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNH 4354

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  +  L   + ++V  G  HT VL+S G++YTWGSN  G LG+G  + +  P  V
Sbjct: 4355 -NRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLV 4412



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H ++K ++       HTL  T  G V++ G  D
Sbjct: 435 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 493

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 494 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 553

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++ IP  T V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 554 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 609

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 610 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 659

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 660 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 719

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 720 IG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 752



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4181 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4240

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P +++ L+   V Q++ G +H+  ++ DG + + +G    G+LGLG  
Sbjct: 4241 LGLGNTSNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 4299

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  GKV ++G      L  G        
Sbjct: 4300 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEG-------- 4349

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L G+ ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4350 -RARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVRE 4408

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4409 PTLVTTL 4415



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 168/392 (42%), Gaps = 43/392 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P +  +F +   + + CG   T  +   G V A G   +G
Sbjct: 4076 LWGAGRHGQLAEAG-RNILVPTIAPSFSQ--AQQVVCGQNCTFVIQPNGTVLACGEGSYG 4132

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4133 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4191

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4192 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4248

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG  V   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4249 --------KKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNST 4300

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G+++T+G +    L  G     + P++V
Sbjct: 4301 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQV 4360

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 393
             G             I  V+ G +HT  +S  G + TWG             +S GQLG 
Sbjct: 4361 PGLSG--------IHIQDVAVGAEHTLVLSSTGDVYTWG------------SNSEGQLGL 4400

Query: 394  GNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G+      PT+V   +     Q+S G  H+ A
Sbjct: 4401 GHTNHVREPTLVTTLQGKNIHQISAGRCHSAA 4432



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 159/353 (45%), Gaps = 44/353 (12%)

Query: 82  HTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
            T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+
Sbjct: 371 ETPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFADAQTIEAGQYCTFVIS 426

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKV 198
            DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V
Sbjct: 427 SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEV 486

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
            SWG G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G
Sbjct: 487 FSWGDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDG 537

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNE 316
            +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +
Sbjct: 538 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGD 597

Query: 317 NGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
           NG LG G  + ++ P   E +QG F    + ++C             A  S G++  WG 
Sbjct: 598 NGKLGHGDTNRVYKPKVVEALQGMF----IRKVCAG------SQSSLALTSTGQVYAWGC 647

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G   G  S +  +             + P ++      + + +S G +H  AL
Sbjct: 648 GACLGCGSSEATA-------------LRPKLIEELATTRVVDISIGDSHCLAL 687



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 39/290 (13%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +GQL    +A + I +PT     S    +Q   G   +  +   G VL+ G
Sbjct: 4073 DVFLWGAGRHGQLA---EAGRNILVPTIAPSFSQ--AQQVVCGQNCTFVIQPNGTVLACG 4127

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 4128 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4178

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+G+ +
Sbjct: 4179 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4237

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
             G LG+G+      PE+V        V Q       V+CG  HT  +S   ++ W +G  
Sbjct: 4238 YGRLGLGNTSNKKLPEKVTA-LEGYHVGQ-------VACGLNHTLVVSADGMMVWAFG-- 4287

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  DG    G+LG GN      P  V+    +   +V+CG   + AL
Sbjct: 4288 ------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4329



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 489 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 548

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 549 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 605

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 606 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 660

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   +V   + G  H   +  +  VY +G+ ++
Sbjct: 661 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 701



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 650

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    VV IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 651 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 710

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 711 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 542 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 599

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 600 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 656

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 657 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 708

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 709 --STGPITKPKKVIGLDGVAIQQISAGTSHS 737


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  G 336
            G
Sbjct: 4339 G 4339



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3752

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3753 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3811

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 3812 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3864

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 3865 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3920

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 3921 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVT 3979

Query: 336  G 336
            G
Sbjct: 3980 G 3980



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 165/328 (50%), Gaps = 32/328 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAA 362
            G      +D I  +I  +S G  H+ A
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLA 732



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 3747 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3806

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 3807 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3865

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 3866 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3915

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 3916 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 3974

Query: 281  PSLISKL 287
            P++++ L
Sbjct: 3975 PTVVTGL 3981



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3642 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 3698

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3699 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3757

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 3758 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 3814

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 3815 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3866

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 3867 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 3926

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 3927 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 3964

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 3965 GLGHTNHVREPTVVTGLQGKNVR--QISAGRCHSAA 3998



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3614 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3669

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3670 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3719

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 3720 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3778

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 3779 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 3830

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 3831 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 3880

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 3881 GIKKVACGTQFSVAL 3895



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
             +   P KV  L GI  +Q + G   S+A T 
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  G 336
            G
Sbjct: 4339 G 4339



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4104 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4215

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4216 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4272 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4330

Query: 336  G 336
            G
Sbjct: 4331 G 4331



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4216

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4217 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4267 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4325

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4326 PTLVTGL 4332



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3993 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4049

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4050 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4108

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4109 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4165

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4166 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4217

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4218 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4277

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4278 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4315

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4316 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4349



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4181

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4182 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4231

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4232 GIKKVACGTQFSVAL 4246



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4208

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4209 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4265 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4323

Query: 336  G 336
            G
Sbjct: 4324 G 4324



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4210 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4260 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4318

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4319 PTLVTGL 4325



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3986 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4042

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4043 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4101

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4102 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4158

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4159 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4210

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4211 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4270

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4271 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4308

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4309 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4342



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4174

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4175 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4224

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4225 GIKKVACGTQFSVAL 4239



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  G 336
            G
Sbjct: 4339 G 4339



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4105 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4216

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4273 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331

Query: 336  G 336
            G
Sbjct: 4332 G 4332



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4217

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4218 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4268 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4327 PTLVTGL 4333



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3994 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4050

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4051 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4109

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4110 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4166

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4167 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4218

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4219 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4278

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4279 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4316

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4317 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4350



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4182

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4183 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4232

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4233 GIKKVACGTQFSVAL 4247



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  G 336
            G
Sbjct: 4339 G 4339



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4115 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4173

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4226

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4227 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4283 -NRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4341

Query: 336  G 336
            G
Sbjct: 4342 G 4342



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4168

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4227

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4228 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4278 -RARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4336

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4337 PTLVTGL 4343



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 172/394 (43%), Gaps = 47/394 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4004 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4060

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4061 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4119

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4120 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4176

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4177 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4228

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4229 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4288

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
              P     +      I  V+ G +HT A+ S G +  WG             +S GQLG 
Sbjct: 4289 --PLLAGVI------IEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGL 4328

Query: 394  GNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4329 GHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4360



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4031

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4032 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4141 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4192

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4193 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4242

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4243 GIKKVACGTQFSVAL 4257



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1691

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 1692 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1750

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 1751 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1803

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 1804 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1859

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 1860 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 1918

Query: 336  G 336
            G
Sbjct: 1919 G 1919



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 1686 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1745

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 1746 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 1805 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1854

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 1855 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 1913

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 1914 PTLVTGL 1920



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 1581 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 1637

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 1638 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 1696

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 1697 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 1753

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 1754 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 1805

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 1806 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 1865

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 1866 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 1903

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 1904 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 1937



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 1553 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1608

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 1609 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1658

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 1659 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1717

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 1718 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 1769

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 1770 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 1819

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 1820 GIKKVACGTQFSVAL 1834


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  G 336
            G
Sbjct: 4339 G 4339



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W----------- 357
           LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W           
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 358 -------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
                  K    ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4074

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4075 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4133

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4134 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4186

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4187 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4242

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4243 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4301

Query: 336  G 336
            G
Sbjct: 4302 G 4302



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4069 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4128

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4129 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4187

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4188 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4237

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4238 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4296

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4297 PTLVTGL 4303



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3964 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4020

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4021 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4079

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4080 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4136

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4137 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4188

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4189 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4248

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4249 P----------VLAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4286

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4287 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4320



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3936 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3991

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3992 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4041

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4042 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4100

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4101 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4152

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4153 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4202

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4203 GIKKVACGTQFSVAL 4217



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 190/413 (46%), Gaps = 50/413 (12%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCS----AFEKHSLKALACGGAHTLFLTETGCVYAT 95
            A  WG  +YG+LG G+L  R +PV+      A    +   ++ G   +L +   G VYA 
Sbjct: 688  AYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGSDGYVYAW 747

Query: 96   GLNDFGQLGISENIGYSLEPLRI-------SGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            G N+ GQLG   + GYS  PLR+       SGL    VQ+S GY+HS A+   G ++ WG
Sbjct: 748  GNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLT--AVQVSAGYYHSLALDARGNIWAWG 805

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSG 207
             N  G+LG G      IP   +    +G  T  Q + GF  + A+   G   SWG    G
Sbjct: 806  FNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFG 865

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LG+G  ++I   +    +Y PR    +  ++V   +AG  HS  ID  G  + +G   +
Sbjct: 866  QLGNG--NNIDSAIPVPVQY-PRDAGTVRAIQV---SAGADHSLIIDTKGNTWAWGWNQL 919

Query: 268  DKMLFQEGNHARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELYTWGSNENGC 319
             ++     +    P +   + Y E        +V  GGYH+  +   G  + WG N++G 
Sbjct: 920  GELGNGSSSADANP-VPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGE 978

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
            LGIG+      P  VQ P +   V     + V VS G  H+  I  EGK  TW W     
Sbjct: 979  LGIGTTSKSEIPALVQYPKNAGAV-----TTVQVSAGGYHSLGIDKEGK--TWAW----- 1026

Query: 379  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL-LEYV 430
                 G++  GQLG+G   +   PT V F  N+  +  S  F+ + A  L Y+
Sbjct: 1027 -----GYNQFGQLGNGTISNSSIPTPVAF--NLSQVISSVTFDTSPATNLNYI 1072



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 162/362 (44%), Gaps = 47/362 (12%)

Query: 83   TLFLTETGCVYATGLNDFGQLGISENIGYSLEPL---RISGLKKEV--VQISTGYHHSSA 137
            TL +   G  YA G N++GQLG    +    +P+   + +G   +   VQ+S G   S A
Sbjct: 679  TLAVGSDGNAYAWGRNNYGQLG-DGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLA 737

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVT 193
            +  DG +Y WG N +GQLG G        +P +V    +  SG+   Q + G+  S+A+ 
Sbjct: 738  VGSDGYVYAWGNNESGQLGNGSSGGYST-VPLRVIDPNDPRSGLTAVQVSAGYYHSLALD 796

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G + +WG    G LG+G  ++I   + + ++Y PR    +  ++V   + GF H+A I
Sbjct: 797  ARGNIWAWGFNQFGELGNG--NNINSAIPTLAQY-PRDAGTVTAIQV---SGGFHHTAAI 850

Query: 254  DENGRVYIFG---------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
            D  G  + +G            +D  +     + R    +  +    +V  G  H+ ++ 
Sbjct: 851  DTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI----QVSAGADHSLIID 906

Query: 305  SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            + G  + WG N+ G LG GS     +P  V G   + P +    + + VS G  H+ AI 
Sbjct: 907  TKGNTWAWGWNQLGELGNGSSSADANP--VPG-MVKYPENAGTVTAIQVSAGGYHSLAID 963

Query: 365  EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN---VKALQVSCGFN 421
            +     W WGG          +  G+LG G       P +V + +N   V  +QVS G  
Sbjct: 964  KNGN-AWAWGG----------NDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGY 1012

Query: 422  HT 423
            H+
Sbjct: 1013 HS 1014



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 140/308 (45%), Gaps = 44/308 (14%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTK-QAALGFEQSVAVTG 194
           A+  DG  Y WG+N+ GQLG G    +  P+  K     S  FT  Q + G EQS+AV  
Sbjct: 681 AVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGS 740

Query: 195 GGKVLSWGAGGSGRLGHGQE---SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            G V +WG   SG+LG+G     S++   LR      PR      G+     +AG+ HS 
Sbjct: 741 DGYVYAWGNNESGQLGNGSSGGYSTVP--LRVIDPNDPR-----SGLTAVQVSAGYYHSL 793

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------EVVCGGYHTCVLTS 305
            +D  G ++ +G     ++      ++  P+L ++ P         +V  G +HT  + +
Sbjct: 794 ALDARGNIWAWGFNQFGELGNGNNINSAIPTL-AQYPRDAGTVTAIQVSGGFHHTAAIDT 852

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-S 364
            G  ++WG N  G LG G+      P  VQ      P D      + VS G  H+  I +
Sbjct: 853 KGNTWSWGWNWFGQLGNGNNIDSAIPVPVQ-----YPRDAGTVRAIQVSAGADHSLIIDT 907

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN---DVDYIHPTIVNFGEN---VKALQVSC 418
           +G    WGW            +  G+LG+G+   D + + P +V + EN   V A+QVS 
Sbjct: 908 KGNTWAWGW------------NQLGELGNGSSSADANPV-PGMVKYPENAGTVTAIQVSA 954

Query: 419 GFNHTGAL 426
           G  H+ A+
Sbjct: 955 GGYHSLAI 962



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 53/176 (30%)

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           T  + S G  Y WG N  G LG G++   + P  V+ P   S       + V VS G + 
Sbjct: 679 TLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGAS----ADFTYVQVSAGDEQ 734

Query: 360 TAAI-SEGKILTWG-------WGGSHGTFS--------EDGHSSG--------------- 388
           + A+ S+G +  WG         GS G +S         +   SG               
Sbjct: 735 SLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLA 794

Query: 389 ---------------GQLGHGNDVDYIHPTIVNFGEN---VKALQVSCGFNHTGAL 426
                          G+LG+GN+++   PT+  +  +   V A+QVS GF+HT A+
Sbjct: 795 LDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAI 850


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 157/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4048

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4049 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4107

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4108 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4160

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4161 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4216

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4217 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4275

Query: 336  G 336
            G
Sbjct: 4276 G 4276



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4043 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4102

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++VDG + + +G    G+LGLG  
Sbjct: 4103 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4161

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4162 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4211

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4212 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4270

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4271 PTLVTGL 4277



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3938 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 3994

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3995 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4053

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4054 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4110

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4111 --------KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNST 4162

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4163 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4222

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4223 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4260

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4261 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4294



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3910 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3965

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3966 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4015

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4016 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4074

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4075 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4126

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4127 QVACGLNHTLAVSVDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4176

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4177 GIKKVACGTQFSVAL 4191



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 157/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  G 336
            G
Sbjct: 4339 G 4339



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++VDG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4190 QVACGLNHTLAVSVDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 157/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4105 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4216

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4273 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331

Query: 336  G 336
            G
Sbjct: 4332 G 4332



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++VDG + + +G    G+LGLG  
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4217

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4218 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4268 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4327 PTLVTGL 4333



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3994 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4050

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4051 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4109

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4110 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4166

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4167 --------KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNST 4218

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4219 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4278

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4279 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4316

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4317 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4350



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4182

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4183 QVACGLNHTLAVSVDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4232

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4233 GIKKVACGTQFSVAL 4247



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 157/296 (53%), Gaps = 21/296 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3584

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3585 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 3643

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   +VAV+  G  V ++G G  G+LG G      
Sbjct: 3644 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGN----- 3696

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 3697 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3752

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              RP  +  L   + E++  G  HT  L+S G++Y WGSN  G LG+G  + +  P
Sbjct: 3753 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREP 3807



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  SI  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGV--SIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 3579 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 3638

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A+++DG + + +G    G+LGLG  
Sbjct: 3639 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS 3697

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 3698 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3747

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 3748 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 3806

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 3807 PTLITVL 3813



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 173/397 (43%), Gaps = 53/397 (13%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   PV   +F +   + + CG   T  +   G V A G   +G
Sbjct: 3474 LWGAGRHGQLAEAG-RNVMVPVAAPSFSQA--QQVVCGQNCTFVIQANGTVLACGEGSYG 3530

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3531 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3589

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 3590 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 3646

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 3647 --------KKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNST 3698

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 3699 AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 3758

Query: 335  ---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
                G F E            ++ G +HT A+S  G +  WG             +S GQ
Sbjct: 3759 PVLSGVFIED-----------IAVGAEHTLALSSTGDVYAWG------------SNSEGQ 3795

Query: 391  LGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            LG G+      PT++    G+N++  Q+S G  H+ A
Sbjct: 3796 LGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 3830



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W----------- 357
           LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W           
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 358 -------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
                  K    ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + V   Q+S G +H+ A
Sbjct: 710 KKVSGLDGVSIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3446 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 3501

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3502 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3551

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 3552 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3610

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+T+ G+L+T+G+ + G LG+G+      PERV        + Q      
Sbjct: 3611 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQ------ 3663

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 3664 -VACGLNHTVAVSMDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDILCGI 3712

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 3713 GIKKVACGTQFSVAL 3727



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
             +   P KV  L G+  +Q + G   S+A T      +V++W       L    E S  
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758

Query: 219 GFLRSTSEY 227
             LRS  E+
Sbjct: 759 SHLRSFLEH 767



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 179/371 (48%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG  ++GQ+G+  
Sbjct: 64  GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A   I +P  ++ LS I   Q A G   S+A++    + SWG    G+LG G E     
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++++   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  + +   +  ++CG +HT A   S G+I ++G GG+            GQLG G
Sbjct: 289 ------FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGIG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P++V
Sbjct: 331 STSNKKSPSMV 341



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G    GQ+
Sbjct: 59  GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ +  +Y WG+N  GQLGLG +  
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT   + S G +Y++G   NG LGIGS     SP  V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 34/284 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P + +       +    G   +  V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G  A
Sbjct: 64  GQLGHDK-----------SRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAA 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ +    ++ R P  I  L   +  +V CG +H+  L+    +Y+WG N+ G LG+G
Sbjct: 113 HGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 382
           S     S  R     S  P   I       + G  H+ A++  G I  WG          
Sbjct: 173 SEKRKESAPRHIKSLSGIPFAHI-------AAGGGHSFALTISGAIFGWG---------- 215

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 --RNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 180/395 (45%), Gaps = 48/395 (12%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+G Y +LG  S+E  S+  P     F    + +++CG  ++  LTE G VY  G    
Sbjct: 547 WGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSV 606

Query: 101 GQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
               I+          L P ++  L+ E+V IS G++HS+A+  +GEL  WG   +GQLG
Sbjct: 607 KNPPIATLGNGTFDDQLLPQKVESLQ-EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLG 665

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G    +  PIP  V+ ++  +  Q   G + ++ +T  GKV +WG    G+LG G    
Sbjct: 666 HGDVFNQ--PIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD--- 720

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 +    TP L+  L+   +   A G  H+A +  N  V +FG+ A         N
Sbjct: 721 ------TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAA----MGSAN 770

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P ++  L     E + CG Y T  LT  G++YTWGS +   LG G     H     
Sbjct: 771 IISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQE--LGHG-----HGTSEA 823

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                E+  +Q   SI  +SCG +H A +++ GKI T G       F + GH++G Q   
Sbjct: 824 HPKLVETLRNQ---SIRQISCGGRHMAFLTDSGKIYTSG----KDPFGQLGHAAGDQ-NR 875

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              +D +  T          + +SCG NH  AL +
Sbjct: 876 PKKIDSLLKTTF--------MSISCGENHNAALFD 902



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 24/294 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG G + ++  P V  +   H +  + CG  HT+ LT+ G V+  G +++GQ
Sbjct: 656 WGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 715

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    +  P+ ++ L K  ++QI+ G  H++ +T + E+ ++G       G    +
Sbjct: 716 LGLGDT-QKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN------GAAMGS 768

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A +I IP  V  L  +  ++ + G   + A+T  G V +WG+G    LGHG         
Sbjct: 769 ANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSG--QELGHGH-------- 818

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             TSE  P+L++ L    ++  + G  H A + ++G++Y  G     ++    G+  R  
Sbjct: 819 -GTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGDQNRPK 877

Query: 282 SLISKLPYS-EEVVCGGYHTCVL----TSGGELYTWGSNENGCLGIGSIDVLHS 330
            + S L  +   + CG  H   L     S  + + W   E     + S++++ S
Sbjct: 878 KIDSLLKTTFMSISCGENHNAALFDTTRSFRDKFCWKLLETQRTLVRSLNIIRS 931



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 37/267 (13%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P     L+ + + +++L    +  +     +++WG+G   +LG          +   S+ 
Sbjct: 514 PGSSPPLNAVNSAESSLSMRSATQLDTSRGLMTWGSGSYCKLGFKS-------VEKDSQP 566

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-DKMLFQEGNHARRPSLIS- 285
           TP  +       +   + G  +SA + ENG VY++G  +V +  +   GN      L+  
Sbjct: 567 TPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQ 626

Query: 286 KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           K+   +E+V    G YH+  + S GEL TWG  E+G LG G  DV + P           
Sbjct: 627 KVESLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHG--DVFNQP--------IPK 676

Query: 343 VDQICTS--IVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
           V Q  TS  +  V CG KHT  +++ GK+ TW            G S  GQLG G+    
Sbjct: 677 VVQSITSHWVTQVQCGEKHTICLTKNGKVFTW------------GTSEYGQLGLGDTQKN 724

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             P +V   +    +Q++CG  H   L
Sbjct: 725 CTPMLVTSLDKYHIIQIACGATHNAVL 751


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 158/301 (52%), Gaps = 21/301 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337

Query: 336  G 336
            G
Sbjct: 4338 G 4338



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTGL 4339



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4284

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4285 P----------VLAGVVIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4322

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4323 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4356



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4188

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4189 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4238

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4239 GIKKVACGTQFSVAL 4253



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 156/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV T G  V ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4279 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLV 4336



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP L+ +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTVL 4339



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4284

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4285 P----------VLAGVVIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4322

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4323 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W----------- 357
           LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W           
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 358 -------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
                  K    ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4188

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4189 QVACGLNHTLAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4238

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4239 GIKKVACGTQFSVAL 4253



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+L++EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  +  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  VE L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4104 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G V+ ++G G  G+LG G      
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4215

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4216 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4272 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4329



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4216

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4217 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4267 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4325

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4326 PTLVTVL 4332



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3993 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4049

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4050 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4108

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4109 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4165

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV-YIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G V + FGD    K+      
Sbjct: 4166 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNST 4217

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4218 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4277

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4278 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4315

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4316 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4349



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQICTSI------------------VLVSCGWK 358
           LG G  + ++ P   E +QG F    + ++C                       + CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4181

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4182 QVACGLNHTLAVSADGSVVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4231

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4232 GIKKVACGTQFSVAL 4246



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+++T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S ++T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 184/392 (46%), Gaps = 51/392 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G+ G GS ++   PV  +A        +A G AH L +   G V+A G N FGQ
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALSGG--FTVAAGKAHALAVRSDGTVWAWGQNLFGQ 413

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +     P++++GL   V  ++ G  HS  + +DG ++ WG+N++GQLG G  A 
Sbjct: 414 LGDGTRM-QRTAPVQVTGLSGGVA-VAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQ 471

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  LSG+     A G   S+AV+  G V +WG+  SG+LG G   + L    
Sbjct: 472 R--PAPVQVTELSGVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARL---- 523

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARR 280
                TP  +  L GV     AAG+ HS  +  +G V+ +G+ +     FQ  +G + +R
Sbjct: 524 -----TPVQVAGLSGVVA--VAAGYFHSLAVRSDGTVWAWGNNS----FFQLGDGTNTQR 572

Query: 281 PS--LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P+   +  L        G +H+ VL S G ++ WG+N  G LG G+ +   SP +V G  
Sbjct: 573 PTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTG-- 630

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                  +   + + +  ++  A  S+G +  W            G +  GQLG G    
Sbjct: 631 -------LSGGVAVAAGDFQSLAVRSDGTVRAW------------GDNIYGQLGDGTVTT 671

Query: 399 YIHPTIVNFGENVKALQVSCGFN---HTGALL 427
            + P  VN      A+    GF+   H+G +L
Sbjct: 672 RLAPVGVNGLSGGMAVAAGNGFSLAVHSGGML 703



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 165/371 (44%), Gaps = 54/371 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G LG G+   R RPV  +   +   +A+A G  H+L +   G V+A G N  GQ
Sbjct: 106 WGHNGSGELGDGTTFRRTRPVQVTGLSE--AEAVAAGDGHSLVVRSDGTVWAWGWNSDGQ 163

Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG     G + E   P++++GL    V+++ G  HS A+ +DG ++ WG+N +GQLG G 
Sbjct: 164 LG----DGTTRERHVPVQVAGLSGG-VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT 218

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +  P+  +V  LSG+     A G   S+AV   G V +WG    G+LG G  S+ L 
Sbjct: 219 TVQRSAPV--QVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL- 273

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   TP  +  L G  V + AAG  HS  +  +G V+ +G     ++       + 
Sbjct: 274 --------TPVQVTGLSG-GVAV-AAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASL 323

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QG 336
            P     L   E V  G  H+ V  S G ++ WG+N  G  G GS     +P +V    G
Sbjct: 324 TPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALSG 383

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
            F+             V+ G  H  A+ S+G +  WG       F        GQLG G 
Sbjct: 384 GFT-------------VAAGKAHALAVRSDGTVWAWG----QNLF--------GQLGDGT 418

Query: 396 DVDYIHPTIVN 406
            +    P  V 
Sbjct: 419 RMQRTAPVQVT 429



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 170/383 (44%), Gaps = 46/383 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  +      +K +A G  H+L +   G V+A G ND GQ
Sbjct: 156 WGWNSDGQLGDGTTRERHVPVQVAGLSG-GVK-VAAGDGHSLAVCLDGTVWAWGRNDSGQ 213

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S  P++++GL   VV ++ G  HS A+  DG ++ WG+NS+GQLG G  +A
Sbjct: 214 LGDGTTVQRS-APVQVAGLSG-VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSA 271

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  LSG      A G   S+AV   G V +WG    G+LG G          
Sbjct: 272 RLTPV--QVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSM-------- 319

Query: 223 STSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            T+  TP + I   EG  V   AAG  HS     +G V+ +G+    +        +  P
Sbjct: 320 -TASLTPVQAIGLSEGEAV---AAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             ++ L     V  G  H   + S G ++ WG N  G LG G+     +P +V G     
Sbjct: 376 VQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTG----- 430

Query: 342 PVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                 +  V V+ G  H+  +  +G +  W            G ++ GQLG G      
Sbjct: 431 -----LSGGVAVAAGDDHSLGLCLDGTVWAW------------GQNTSGQLGDGTTAQ-- 471

Query: 401 HPTIVNFGENVKALQVSCGFNHT 423
            P  V   E    + V+ G +H+
Sbjct: 472 RPAPVQVTELSGVVAVAAGTSHS 494



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 137/287 (47%), Gaps = 23/287 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  +  E   + A+A G +H+L ++  G V+A G N  GQ
Sbjct: 456 WGQNTSGQLGDGTTAQRPAPVQVT--ELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQ 513

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P++++GL   VV ++ GY HS A+  DG ++ WG NS  QLG G    
Sbjct: 514 LGDGTTRAR-LTPVQVAGLSG-VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQ 571

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  LSG     AA G+  S+ +   G V  WG    G+LG+G          
Sbjct: 572 R--PTPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGT--------- 618

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           + + ++P  +  L G  V +AA  F  S  +  +G V  +GD    ++   +G    R  
Sbjct: 619 ANASFSPVQVTGLSG-GVAVAAGDF-QSLAVRSDGTVRAWGDNIYGQL--GDGTVTTRLA 674

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           P  ++ L     V  G   +  + SGG L+ WG N +G LG G   V
Sbjct: 675 PVGVNGLSGGMAVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHGGPSV 721



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 147/331 (44%), Gaps = 32/331 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG G+   R  P          L  +A G +H+L +   G  +A G N  G+L
Sbjct: 57  GSNTSGQLGDGTTSERRVPAQVVGLSDAVL--VAAGSSHSLAIRSDGTAWAWGHNGSGEL 114

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G          P++++GL  E   ++ G  HS  +  DG ++ WG NS+GQLG G    +
Sbjct: 115 GDGTTF-RRTRPVQVTGLS-EAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRER 172

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            +P+  +V  LSG    + A G   S+AV   G V +WG   SG+LG G          +
Sbjct: 173 HVPV--QVAGLSGGV--KVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT---------T 219

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPS 282
                P  +  L GV     AAG  HS  +  +G V+ +G R  D  L      AR  P 
Sbjct: 220 VQRSAPVQVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWG-RNSDGQLGDGTTSARLTPV 276

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ L     V  G +H+  + S G ++ WG N  G LG GS+    +P +  G  SE  
Sbjct: 277 QVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAIG-LSEGE 335

Query: 343 VDQICTSIVLVSCGWKHT-AAISEGKILTWG 372
                     V+ G  H+  A S+G +  WG
Sbjct: 336 A---------VAAGETHSLVARSDGTVWAWG 357



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 147/330 (44%), Gaps = 44/330 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           LA GG+H+L +   G V+A G N  GQLG        + P ++ GL   V+ ++ G  HS
Sbjct: 37  LAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRV-PAQVVGLSDAVL-VAAGSSHS 94

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            AI  DG  + WG N +G+LG G    +  P+  +V  LS    +  A G   S+ V   
Sbjct: 95  LAIRSDGTAWAWGHNGSGELGDGTTFRRTRPV--QVTGLS--EAEAVAAGDGHSLVVRSD 150

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G          +   + P  +  L G  VK+ AAG  HS  +  
Sbjct: 151 GTVWAWGWNSDGQLGDGT---------TRERHVPVQVAGLSG-GVKV-AAGDGHSLAVCL 199

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +G V+ +G    D     +G   +R  P  ++ L     V  G  H+  + S G ++ WG
Sbjct: 200 DGTVWAWGRN--DSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAWG 257

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
            N +G LG G+     +P +V G           +  V V+ G  H+ A+ S+G +  W 
Sbjct: 258 RNSDGQLGDGTTSARLTPVQVTG----------LSGGVAVAAGMFHSLAVRSDGTVWAW- 306

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                      G ++ GQLG G+    + P
Sbjct: 307 -----------GQNTRGQLGDGSMTASLTP 325



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 120/281 (42%), Gaps = 38/281 (13%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +++ G  HS AI  DG ++  G N++GQLG G  + +   +P +V  LS       A G 
Sbjct: 36  RLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSER--RVPAQVVGLSDAVL--VAAGS 91

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G   +WG  GSG LG G         R T       + E E V     AAG
Sbjct: 92  SHSLAIRSDGTAWAWGHNGSGELGDGTT------FRRTRPVQVTGLSEAEAV-----AAG 140

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             HS  +  +G V+ +G  +  ++          P  ++ L    +V  G  H+  +   
Sbjct: 141 DGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGGVKVAAGDGHSLAVCLD 200

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
           G ++ WG N++G LG G+     +P +V G           + +V V+ G  H+ A+ S+
Sbjct: 201 GTVWAWGRNDSGQLGDGTTVQRSAPVQVAG----------LSGVVAVAAGSSHSLAVRSD 250

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
           G +  W            G +S GQLG G     + P  V 
Sbjct: 251 GTVWAW------------GRNSDGQLGDGTTSARLTPVQVT 279



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 38/243 (15%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G   S+A+   G V + G+  SG+LG G          +TSE   R+  ++ G+   +
Sbjct: 38  AAGGSHSLAIRPDGTVWAAGSNTSGQLGDG----------TTSER--RVPAQVVGLSDAV 85

Query: 243 -AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
             AAG  HS  I  +G  + +G     ++         RP  ++ L  +E V  G  H+ 
Sbjct: 86  LVAAGSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRTRPVQVTGLSEAEAVAAGDGHSL 145

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
           V+ S G ++ WG N +G LG G+    H P +V G           +  V V+ G  H+ 
Sbjct: 146 VVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAG----------LSGGVKVAAGDGHSL 195

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A+  +G +  W            G +  GQLG G  V    P  V     V A  V+ G 
Sbjct: 196 AVCLDGTVWAW------------GRNDSGQLGDGTTVQRSAPVQVAGLSGVVA--VAAGS 241

Query: 421 NHT 423
           +H+
Sbjct: 242 SHS 244


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G V+ ++G G  G+LG G      
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4208

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4265 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4322



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4260 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4318

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4319 PTLVTVL 4325



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3986 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4042

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4043 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4101

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4102 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4158

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV-YIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G V + FGD    K+      
Sbjct: 4159 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNST 4210

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4211 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4270

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4271 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4308

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4309 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4342



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQICTSI------------------VLVSCGWK 358
           LG G  + ++ P   E +QG F    + ++C                       + CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4174

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4175 QVACGLNHTLAVSADGSVVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4224

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4225 GIKKVACGTQFSVAL 4239



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+++T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S ++T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 173/385 (44%), Gaps = 36/385 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  +R  PV  S      + A+A GG HT  LT +G V+  G N +GQ
Sbjct: 179 WGDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSGEVWCWGYNYYGQ 237

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P  + GL   +  I+ G  H+ A+   G ++ WG+N +GQLG G    
Sbjct: 238 LGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTD 297

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+   V  L    T  AA G   + A+TG G+V  WG  G G+LG G          
Sbjct: 298 SSTPV--AVSGLPSGVTAIAA-GDYHTCALTGSGEVWCWGGNGFGQLGDGT--------- 345

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V+  AAG  H+  +  +G V+ +G     ++          P+
Sbjct: 346 TTARSTPAAVSGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPA 404

Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  GG HTC L S G ++ WG N +G LG GS     +P  V G    S
Sbjct: 405 AVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSG--LAS 462

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
            V+ I       + GW   A  S G +  W            G ++ GQLG G+ + +I 
Sbjct: 463 GVETI------AAGGWHTCALTSSGGVWCW------------GRNNSGQLGDGSTIYHIT 504

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V+ G       ++ G  HT AL
Sbjct: 505 PVAVS-GLPSGVTAIAAGDYHTCAL 528



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 169/365 (46%), Gaps = 38/365 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS      PV  S      ++ +A GG HT  LT +G V+  G N+ GQ
Sbjct: 435 WGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGVWCWGRNNSGQ 493

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I Y + P+ +SGL   V  I+ G +H+ A+T  G ++ WG N +GQLG G    
Sbjct: 494 LGDGSTI-YHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTD 552

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L+   T  AA  F  + A+T  G V  WGA   G+LG G          
Sbjct: 553 RSTPV--AVSGLTSGVTVIAAGRF-HTCALTSSGGVWCWGANFDGQLGDGT--------- 600

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L      IAA G+ H+  +  +G V+ +GD    ++      +   P 
Sbjct: 601 TTNRTTPVAVSGLPSGVTAIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 659

Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  G+ HTC LTS GE++ WG N  G LG G+     +P  V G     
Sbjct: 660 AVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSG----- 714

Query: 342 PVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
               + + +  ++ G  HT A++  G ++ W            G++  GQLG G  +   
Sbjct: 715 ----LPSGVTAIAAGVYHTCALTGSGGVMCW------------GNNGDGQLGDGRPLYRT 758

Query: 401 HPTIV 405
            P  V
Sbjct: 759 TPVDV 763



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 175/394 (44%), Gaps = 50/394 (12%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LG G+   SR  P          + A+A GG HT  L  +G V+  G ND G
Sbjct: 230 WGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVWCWGRNDSG 288

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   +   S  P+ +SGL   V  I+ G +H+ A+T  GE++ WG N  GQLG G   
Sbjct: 289 QLGDGSDTDSS-TPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTT 347

Query: 162 AKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           A+  P     +P+ VE +        A G   + A+   G V  WG   SG+LG G    
Sbjct: 348 ARSTPAAVSGLPSGVETI--------AAGDYHTCALMSSGGVWCWGRNNSGQLGDGT--- 396

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 +T+  TP  +  L      IAA G LH+  +  +G V+ +G     ++      
Sbjct: 397 ------TTARSTPAAVSGLPSGVTAIAAGG-LHTCALMSSGGVWCWGLNNSGQLGDGSDT 449

Query: 277 HARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            +  P  +S L    E +  GG+HTC LTS G ++ WG N +G LG GS     +P  V 
Sbjct: 450 DSSTPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVS 509

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           G         + + +  ++ G  HT A++  G +  WG            ++  GQLG G
Sbjct: 510 G---------LPSGVTAIAAGDYHTCALTGSGGVWCWG------------YNLSGQLGDG 548

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              D   P  V+ G       ++ G  HT AL  
Sbjct: 549 TTTDRSTPVAVS-GLTSGVTVIAAGRFHTCALTS 581



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 169/388 (43%), Gaps = 38/388 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G+LG G+  +R  P   S      + A+A G  HT  LT +G V   G N  GQ
Sbjct: 77  WGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSGGVRCWGANYSGQ 135

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     G S  P  +SGL   V  I+ G  H+ A+   G +  WG N  GQLG G    
Sbjct: 136 LGNGLTFGRS-TPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTN 194

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A+TG G+V  WG    G+LG G  +    + R
Sbjct: 195 RRTPV--AVSGLPSGVTAIAAGGL-HTCALTGSGEVWCWGYNYYGQLGDGTTT----YSR 247

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S    TP  +  L      IAA G LH+  +  +G V+ +G     ++       +  P 
Sbjct: 248 S----TPAAVGGLPSGMTAIAAGG-LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPV 302

Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  G YHTC LT  GE++ WG N  G LG G+     +P  V G     
Sbjct: 303 AVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSG----- 357

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
               + + +  ++ G  HT A+ S G +  W            G ++ GQLG G      
Sbjct: 358 ----LPSGVETIAAGDYHTCALMSSGGVWCW------------GRNNSGQLGDGTTTARS 401

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLE 428
            P  V+ G       ++ G  HT AL+ 
Sbjct: 402 TPAAVS-GLPSGVTAIAAGGLHTCALMS 428



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 166/371 (44%), Gaps = 48/371 (12%)

Query: 66  SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           S+F     + A+A GGAHT  LT +G V   G NDFGQLG       S  P  +SGL   
Sbjct: 47  SSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRS-TPGAVSGLPSG 105

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
           V  I+ G +H+ A+T  G +  WG N +GQLG G    +  P     +P+ V  +     
Sbjct: 106 VTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAI----- 160

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
              A G + + A+   G V+ WG    G+LG G          +T+  TP  +  L    
Sbjct: 161 ---AAGGDHTCALMSSGGVMCWGDNYYGQLGDGT---------TTNRRTPVAVSGLPSGV 208

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYS-EEVVCGG 297
             IAA G LH+  +  +G V+ +G     ++      ++R  P+ +  LP     +  GG
Sbjct: 209 TAIAAGG-LHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGG 267

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            HTC L S G ++ WG N++G LG GS     +P  V G         + + +  ++ G 
Sbjct: 268 LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSG---------LPSGVTAIAAGD 318

Query: 358 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            HT A++ G    W WGG+   F        GQLG G       P  V+ G       ++
Sbjct: 319 YHTCALT-GSGEVWCWGGNG--F--------GQLGDGTTTARSTPAAVS-GLPSGVETIA 366

Query: 418 CGFNHTGALLE 428
            G  HT AL+ 
Sbjct: 367 AGDYHTCALMS 377



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  +R  P   S      + A+A G  HT  LT +G V+  G N +GQ
Sbjct: 639 WGDNYYGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQ 697

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  +SGL   V  I+ G +H+ A+T  G +  WG N +GQLG G+   
Sbjct: 698 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLY 756

Query: 163 KVIPIPTKVECLSGIF 178
           +  P+        G++
Sbjct: 757 RTTPVDVVTSASWGVY 772


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  141 bits (355), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 95/328 (28%), Positives = 161/328 (49%), Gaps = 50/328 (15%)

Query: 111  YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            + + PL+    +K+ +++S G+ H + IT DGELY WG N +GQLG G +  K + +P +
Sbjct: 1113 FPMAPLKN---EKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKR 1169

Query: 171  VECLSG---IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            V+   G   IF  +   G E ++AV     V SWG+   G+LGHG         ++ ++ 
Sbjct: 1170 VDFFRGKSPIFMVEC--GGEHTIAVDSNYFVYSWGSDKFGQLGHGT--------KAVNQS 1219

Query: 228  TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR---P 281
             P++I+EL G K++  AAGF H+  + ++G ++ FG     ++    F   N   R    
Sbjct: 1220 RPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEIN 1279

Query: 282  SLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            +++  L + +     ++ CG  H+ + +  GE+Y+WG  + G LG    + +  P  +  
Sbjct: 1280 AIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLI-- 1337

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                    +    +  +SCG  HT A ++ K + +WG  G H            +LGH +
Sbjct: 1338 --------ETLRGVTKISCGHFHTVATTDLKNVYSWG-SGEH-----------MKLGHSS 1377

Query: 396  DVDYIHPTIVNFGENVKALQVSCGFNHT 423
            D D   P +V+F       +V CG NHT
Sbjct: 1378 DKDESVPKVVDFFIQKNVSKVVCGQNHT 1405



 Score =  121 bits (303), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 168/411 (40%), Gaps = 73/411 (17%)

Query: 43   WGNGDYGRLGLGSLE---SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLN 98
            WG+   G+LG G LE   +   P     F  K  +  + CGG HT+ +     VY+ G +
Sbjct: 1146 WGSNQSGQLGHG-LEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSD 1204

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             FGQLG          P  I  L  + +Q I+ G+ H+  +   GEL+ +G    GQLG 
Sbjct: 1205 KFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGT 1264

Query: 158  GKKAAKVIPIPTKVECLSGIFT-------KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            G   +K IP   ++  + G           Q A GF  SV  +  G+V SWG G  G+LG
Sbjct: 1265 GSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLG 1324

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            H    +I           PRLI+ L GV  KI + G  H+    +   VY +G     K+
Sbjct: 1325 HKVFENI---------SKPRLIETLRGV-TKI-SCGHFHTVATTDLKNVYSWGSGEHMKL 1373

Query: 271  LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLT---------------------SGG 307
                      P ++         +VVCG  HT  +T                     S  
Sbjct: 1374 GHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSS 1433

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI-----VLVSCGWKHTAA 362
             +Y WGS E+G LG+G          ++ PF + P+      +     + +SCG   +A 
Sbjct: 1434 PIYAWGSAEHGKLGLGG--------DLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAM 1485

Query: 363  I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
            I S   I  WG G              GQ+G+G + D   PT ++  ++ K
Sbjct: 1486 ITSNNAIYVWGCG------------RFGQIGNGKNDDVWVPTRISLNDSTK 1524



 Score =  115 bits (288), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 161/369 (43%), Gaps = 28/369 (7%)

Query: 69   EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGL--KKEV 125
            EK ++K ++CG  H   +T+ G +Y  G N  GQLG    +  +L  P R+     K  +
Sbjct: 1121 EKKAIK-VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPI 1179

Query: 126  VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              +  G  H+ A+  +  +Y WG +  GQLG G KA      P  +E L+G   +  A G
Sbjct: 1180 FMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAG 1238

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
            F  ++ +   G++ S+G G  G+LG G   S     R         ++  +G K+   A 
Sbjct: 1239 FAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIAC 1298

Query: 246  GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
            GF HS    ENG VY +G     ++  +   +  +P LI  L    ++ CG +HT   T 
Sbjct: 1299 GFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKISCGHFHTVATTD 1358

Query: 306  GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
               +Y+WGS E+  LG  S D   S  +V   F +  V +       V CG  HT  I+ 
Sbjct: 1359 LKNVYSWGSGEHMKLGHSS-DKDESVPKVVDFFIQKNVSK-------VVCGQNHTMTITF 1410

Query: 366  GKILTWGWGGSHGTFSEDGHSSG----------GQLGHGNDV-----DYIHPTIVNFGEN 410
               L           + +G SS           G+LG G D+     D   PT +    +
Sbjct: 1411 PDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNS 1470

Query: 411  VKALQVSCG 419
            +  + +SCG
Sbjct: 1471 LNLIDISCG 1479



 Score =  106 bits (264), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 148/344 (43%), Gaps = 55/344 (15%)

Query: 39   FAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
            F   WG+  +G+LG G+   ++ RP V        ++A+A G AH + L ++G +++ G 
Sbjct: 1197 FVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGY 1256

Query: 98   NDFGQLGI----SENIGYSLEPLRI-SGLKK----EVVQISTGYHHSSAITVDGELYMWG 148
             DFGQLG     S+NI   +E   I  GL+     ++ QI+ G+ HS   + +GE+Y WG
Sbjct: 1257 GDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWG 1316

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                GQLG   K  + I  P  +E L G+   + + G   +VA T    V SWG+G   +
Sbjct: 1317 LGKQGQLG--HKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLKNVYSWGSGEHMK 1372

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI--------------D 254
            LGH  +           E  P+++       V     G  H+  I              D
Sbjct: 1373 LGHSSDKD---------ESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDED 1423

Query: 255  E---NGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---------EVVCGGY 298
            E   NG+    +Y +G     K+    G   + P     +P +          ++ CG  
Sbjct: 1424 EENMNGKSSSPIYAWGSAEHGKLGL--GGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSD 1481

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             + ++TS   +Y WG    G +G G  D +  P R+    S  P
Sbjct: 1482 FSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISLNDSTKP 1525


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 174/372 (46%), Gaps = 38/372 (10%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WGN   G+LG+G      + P +C  F    LK +ACGG HTLFL + G VY  G N  G
Sbjct: 4   WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  +  G S  P  +  L  +++  +S G  HS A+   G++++WG    GQLGL + 
Sbjct: 64  QLG-HDKAGNS--PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGL-ET 119

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A   + IP  ++ L      Q   G +  +A++  G++ +WG   SG+LG G+       
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK------- 172

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              TS+ +P  +K L G+ +    AG  H   +  +G V+ +G     ++   +      
Sbjct: 173 -GETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV 231

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I K   S+ VV   CG  HT  LT  G L+T+G    G LG GS +    P RV   
Sbjct: 232 PCHI-KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRV--- 287

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--N 395
                ++ + T +  ++CG  HT A          +  S GT    G +S GQLG G   
Sbjct: 288 -----MELMGTEVSQITCGRHHTLA----------FVPSSGTVYAFGCNSHGQLGTGILA 332

Query: 396 DVDYIHPTIVNF 407
           D+   HP   +F
Sbjct: 333 DLRSPHPVKNDF 344



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 14/225 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG GD G+LGL + E+  R P +      HS+  + CG  H + L+  G ++  G N  
Sbjct: 106 VWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSS 165

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+ +     L P  +  L    + QI+ G  H  A+++ G ++ WGKN  GQLGL  
Sbjct: 166 GQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLND 225

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  +   +P  ++ L        + G E + A+T  G + ++G G  G+LGHG       
Sbjct: 226 KQDRA--VPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGS------ 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
              S +E  PR + EL G +V     G  H+ A +  +G VY FG
Sbjct: 278 ---SNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFG 319



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 37/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG   +GQLG+G +   V   P      SG   K+ A G + ++ +   G V + G+   
Sbjct: 4   WGNARDGQLGIGVEGNPVFE-PRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSC 62

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +  +           +P L+  L+  K+ + + G  HS  ++E G+V+++G   
Sbjct: 63  GQLGHDKAGN-----------SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGD 111

Query: 267 VDKMLFQEGNHARR-PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  +    A R P L+ KL  +S  +VVCG  H   L+  G+L+TWG N +G LG+G
Sbjct: 112 GGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLG 171

Query: 324 SIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
             +            S SPV  +    +  ++ G  H  A+S  G +  WG         
Sbjct: 172 KGET--------SKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWG--------- 214

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               +  GQLG  +  D   P  + F  + + + +SCG  HT AL
Sbjct: 215 ---KNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAAL 256



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 49/338 (14%)

Query: 101 GQLGISENIGYSLEPLRI------SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           GQLGI        EP RI       GLK    +++ G  H+  +  DG +Y  G NS GQ
Sbjct: 10  GQLGIGVEGNPVFEP-RICHVFSGRGLK----EVACGGQHTLFLLQDGSVYTCGSNSCGQ 64

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG  K        P  V  L        + G   SVAV   G+V  WGAG  G+LG   E
Sbjct: 65  LGHDKAGNS----PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLG--LE 118

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           ++       T+   PRL+K+L    +     G  H   +  +G+++ +G  +  ++   +
Sbjct: 119 TA------ETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK 172

Query: 275 GNHAR-RPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           G  ++  PS +  L   P ++ +  GG H   L+  G ++ WG N+ G LG+        
Sbjct: 173 GETSKLSPSPVKSLAGIPLAQ-ITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV 231

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  ++   S+         +V +SCG +HTAA+++ G + T+G G            S G
Sbjct: 232 PCHIKFLRSQR--------VVYISCGDEHTAALTKSGGLFTFGDG------------SRG 271

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGHG+  + + P  V      +  Q++CG +HT A +
Sbjct: 272 QLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFV 309


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 153/298 (51%), Gaps = 17/298 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG G  +++ +P +  AF   +++ ++CG  HT  L E G V+  G  +FGQ
Sbjct: 11  WGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQ 70

Query: 103 LGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   ++  ++  P  +S L+ K V Q++ G+HH+ A+  +G+LY WG    G+LG G +
Sbjct: 71  LGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDE 130

Query: 161 AAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    P  VE L G   T  AA GF  SV +  GG +L+WG G  G+LGHG E     
Sbjct: 131 VRQ--ASPKLVESLQGKEVTFVAAGGFHSSVIIE-GGNLLTWGGGYFGQLGHGDE----- 182

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T   TP+++K ++       A G  H+  + ++  V+ +G     K+   +     
Sbjct: 183 ----TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHA 238

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            P +I+ L       +  GG+H+  LTS G LYTWG  + G LG G  +  + P  V+
Sbjct: 239 EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVE 296



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 155/318 (48%), Gaps = 32/318 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           VY+ G    GQLG  +        L ++ L   V Q+S G  H++ +  +GE++ +G+ +
Sbjct: 8   VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG G      +  P  V  L G   KQ A G+  + A+   G++ +WG+G  GRLGH
Sbjct: 68  FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G E           + +P+L++ L+G +V   AAG  HS+ I E G +  +G     ++ 
Sbjct: 128 GDE---------VRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             +    + P ++  +    + EV CG +HT +LT   E++TWGS E G LGIG      
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIG------ 232

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 388
             E+   P   + +  +   ++ +S G  H+AA+ SEG + TWG G              
Sbjct: 233 DEEKHAEPIMITALQGV--GVIHISTGGFHSAALTSEGVLYTWGGGDK------------ 278

Query: 389 GQLGHGNDVDYIHPTIVN 406
           GQLGHG++     P +V 
Sbjct: 279 GQLGHGDENSQNIPVVVE 296



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 118/240 (49%), Gaps = 36/240 (15%)

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           G +V SWG G  G+LGHG E +         +  PRL+    G  V+  + G  H+A + 
Sbjct: 5   GSEVYSWGQGVLGQLGHGDEKT---------QRQPRLVVAFLGFNVRQVSCGNQHTAILM 55

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGEL 309
           ENG V+ FG R     L Q  +   +   P+L+S L   + ++V CG +HTC L   G+L
Sbjct: 56  ENGEVFTFG-RGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQL 114

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG-KI 368
           YTWGS E G LG G      SP+ V+    +         +  V+ G  H++ I EG  +
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVESLQGKE--------VTFVAAGGFHSSVIIEGGNL 166

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           LTWG     G F        GQLGHG++ D   P +V   +   A +V+CG +HT  L +
Sbjct: 167 LTWG----GGYF--------GQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQ 214



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +G+LG G    R  P +    ++     +ACG  HTL LT++  V+  G  +FG+
Sbjct: 169 WGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGK 228

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI +   ++ EP+ I+ L+   V+ ISTG  HS+A+T +G LY WG    GQLG G + 
Sbjct: 229 LGIGDEEKHA-EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDEN 287

Query: 162 AKVIPIPTKV 171
           ++ IP+  +V
Sbjct: 288 SQNIPVVVEV 297



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 23/178 (12%)

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLI-SKLPYS-EEVVCGGYHTCVLTSGGELYTW 312
           E   VY +G   + ++   +    R+P L+ + L ++  +V CG  HT +L   GE++T+
Sbjct: 4   EGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTF 63

Query: 313 GSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA-ISEGKILT 370
           G    G LG G S+    S   +        V Q       V+CGW HT A I  G++ T
Sbjct: 64  GRGNFGQLGQGASVTANVSTPALVSALQGKHVKQ-------VACGWHHTCALIDNGQLYT 116

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           WG G              G+LGHG++V    P +V   +  +   V+ G  H+  ++E
Sbjct: 117 WGSG------------EYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIE 162


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 166/343 (48%), Gaps = 38/343 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISG---LKKEVVQISTGYHHSSAITVDGELYMWG 148
           VYA G  D GQLGI +   YS  P   S    + K++V I+   +H++ +T +GE+Y  G
Sbjct: 4   VYALGRGDLGQLGIGD---YSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N  GQLG+     +V+PI  +V  L        A GF+ +VAVT  G + SWG    G+
Sbjct: 61  SNDAGQLGVRGMEEQVVPI--RVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG    + + G         PR++K    +     AAG  H+  +  +G VY FGD +  
Sbjct: 119 LGFDSGNIVDGV-------QPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSG 171

Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            +     +    PSL+  L      ++ CG  H+  LT  G+++TWG  + G LG GS  
Sbjct: 172 ALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQ 231

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
            +  P  V+     + VD     ++ ++CG  HT AI S+G++ +WG    HG +     
Sbjct: 232 NIKLPVAVK-----ALVDH---DVIQIACGGDHTLAITSDGRLFSWG----HGLW----- 274

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              GQ GHG   D + P  V+  E    +QVS G  HT  LL+
Sbjct: 275 ---GQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLD 314



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 160/333 (48%), Gaps = 22/333 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G GD G+LG+G       P   S      +  +A    HT FLT+ G VY TG ND GQL
Sbjct: 8   GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67

Query: 104 GISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+   +   + P+R++ L   +V  I+ G+ H+ A+T  G L  WG +  GQLG      
Sbjct: 68  GV-RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNI 126

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P  V+    +   + A G   ++A+TG G V S+G G SG LGHG        L 
Sbjct: 127 VDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGN-------LD 179

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             S  TP L+K L G+ V   A G  HSA +  +G+V+ +G     ++      + + P 
Sbjct: 180 GCS--TPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237

Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
            +  L   +  ++ CGG HT  +TS G L++WG    G  G G+ + + SP++V     E
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQL--E 295

Query: 341 SPVDQICTSIVLVSCGWKHTAA-ISEGKILTWG 372
             V      +V VS G +HT   +  G++  WG
Sbjct: 296 GRV------LVQVSAGARHTVVLLDRGEVYGWG 322



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 142/287 (49%), Gaps = 25/287 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D G+LG+  +E +  P+  +A + H +  +ACG  HT+ +TETG + + G +++GQL
Sbjct: 60  GSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119

Query: 104 GI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G  S NI   ++P  + G +     +++ G +H+ A+T  G++Y +G  S+G LG G   
Sbjct: 120 GFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P+ V+ L G+   Q A G   S A+T  GKV +WG G  G+LGHG   +I    
Sbjct: 180 G--CSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI---- 233

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +K L    V   A G  H+  I  +GR++ +G       L+ +  H  + 
Sbjct: 234 -----KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWG-----HGLWGQTGHGTKE 283

Query: 282 SLISKLPYSE-------EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
            ++S     +       +V  G  HT VL   GE+Y WG  E   LG
Sbjct: 284 DVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 13/226 (5%)

Query: 41  ALWGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A WG  +YG+LG   G++    +P +           +A GG HTL LT +G VY+ G  
Sbjct: 109 ASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDG 168

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G LG     G S   L  S     V QI+ G +HS+A+TVDG+++ WG+   GQLG G
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             + + I +P  V+ L      Q A G + ++A+T  G++ SWG G  G+ GHG +  +L
Sbjct: 229 --STQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVL 286

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
                    +P+ + +LEG  +   +AG  H+  + + G VY +GD
Sbjct: 287 ---------SPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG+LG GS ++   PV   A   H +  +ACGG HTL +T  G +++ G   +GQ
Sbjct: 217 WGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQ 276

Query: 103 LG--ISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G    E++   L P ++  L+  V VQ+S G  H+  +   GE+Y WG     QLG
Sbjct: 277 TGHGTKEDV---LSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4078

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4079 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4137

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4138 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4190

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4191 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4246

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4247 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLV 4304



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4073 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4132

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4133 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4191

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4192 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4241

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4242 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4300

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4301 PTLVTVL 4307



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3968 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4024

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4025 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4083

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4084 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4140

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4141 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4192

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4193 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4252

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4253 P----------VLAGVVIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4290

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4291 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4324



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3940 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3995

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3996 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4045

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4046 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4104

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4105 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4156

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4157 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4206

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4207 GIKKVACGTQFSVAL 4221



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 156/296 (52%), Gaps = 21/296 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4116

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+++ +G    G+LGLG 
Sbjct: 4117 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN 4175

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV T G  V ++G G  G+LG G      
Sbjct: 4176 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4228

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4229 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4284

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              RP  +  L     E+V  G  HT  +TS G++Y WGSN  G LG+G  + +  P
Sbjct: 4285 -NRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREP 4339



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP L+ +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4111 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGR 4170

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4171 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4229

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4230 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4279

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  I   G VY +G  +  ++     NH R 
Sbjct: 4280 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVRE 4338

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4339 PTLITVL 4345



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 175/385 (45%), Gaps = 59/385 (15%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 481 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W--------- 357
           G LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W         
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 647

Query: 358 ---------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI- 400
                    K    ++  +I+    G SH    S D      G++S GQ G GN    I 
Sbjct: 648 SSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 401 HPTIVNFGENVKALQVSCGFNHTGA 425
            P  V+  + V   Q+S G +H+ A
Sbjct: 708 KPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4006 LWGAGRHGQLAEAG-RNVMIPAGAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4062

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4063 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4121

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4122 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSN- 4178

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4179 --------KKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNST 4230

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4231 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4290

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT AI S G +  WG             +S GQL
Sbjct: 4291 P----------VLAGVVIEDVAVGAEHTLAITSTGDVYAWG------------SNSEGQL 4328

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT++    G+N++  Q+S G  H+ A
Sbjct: 4329 GLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4362



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3978 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAGAPSFSQ- 4033

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4034 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4083

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4084 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4142

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+T+ G+++T+G+ + G LG+G+      PERV               I 
Sbjct: 4143 QMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4194

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4195 QVACGLNHTLAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4244

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4245 GIKKVACGTQFSVAL 4259



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+L++EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  +  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  VE L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 19/181 (10%)

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           +  + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKI 368
              G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEV 479

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALL 427
            +WG G              G+LGHGN     +P ++      K +  VS G+ H+ A+ 
Sbjct: 480 FSWGDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 428 E 428
           E
Sbjct: 528 E 528


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 157/296 (53%), Gaps = 21/296 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  +  +CG   H++ LTE+G V++ G  D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDY 4096

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN 4155

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4156 TSNK--KLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGN----- 4208

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNH 4264

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              RP  +  L   + E+V  G  HT  L+S G++Y WGSN  G LG+G  + +  P
Sbjct: 4265 -NRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREP 4319



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G +++ G  D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGR 4150

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
            LG+       L P R+S L+  +V Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4151 LGLGNTSNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNS 4209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEG-------- 4259

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4260 -RARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVRE 4318

Query: 281  PSLISKL 287
            P+LIS L
Sbjct: 4319 PTLISAL 4325



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H ++K ++       HTL  T  G V++ G  D
Sbjct: 423 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGD 481

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 482 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 541

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++ IP  T V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 542 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 597

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 598 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 647

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 648 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 707

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 708 IG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 740



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 169/395 (42%), Gaps = 49/395 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P +  +F +   + + CG   T  +   G V A G   +G
Sbjct: 3986 LWGAGRHGQLAEAG-RNILVPTLAPSFSQA--QQVVCGQNCTFVIQANGTVSACGEGSYG 4042

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4043 RLGQGNSDDLHVLTV-ISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4101

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ S+G G  GRLG G  S+ 
Sbjct: 4102 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSN- 4158

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG +V   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4159 --------KKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNST 4210

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4211 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQV 4270

Query: 335  Q---GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
                G F E            V+ G +HT  +S  G +  WG             +S GQ
Sbjct: 4271 PALTGVFIED-----------VAVGAEHTLTLSSTGDVYAWG------------SNSEGQ 4307

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            LG G+      PT+++  +     Q+S G  H+ A
Sbjct: 4308 LGLGHTNHVREPTLISALQGKNIQQISAGRCHSAA 4342



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 158/350 (45%), Gaps = 44/350 (12%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 362 MVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISSDG 417

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 418 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSW 477

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 478 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 528

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 529 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 588

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
           LG G  + ++ P   E +QG F    + ++C             A  S G++  WG G  
Sbjct: 589 LGHGDTNRVYKPKVVEALQGMF----IRKVCAG------SQSSLALTSTGQVYAWGCGAC 638

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G  S +  +             + P ++      + + +S G +H  AL
Sbjct: 639 LGCGSSEATA-------------LRPKLIEELATTRVVDISIGDSHCLAL 675



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 140/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            +SG+ ++V+  +T       +    ++++WG   +GQL    +A + I +PT     S  
Sbjct: 3958 VSGMDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTLAPSFSQ- 4013

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G V + G G  GRLG G    +         +   +I  L+G
Sbjct: 4014 -AQQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4064 FVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+++G+ + G LG+G+      PERV        V Q      
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSA-LEGHQVGQ------ 4175

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S   +  W +G        DG    G+LG GN      P  V+    +
Sbjct: 4176 -VACGLNHTLAVSADGMTVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4224

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4225 GIKKVACGTQFSVAL 4239



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 477 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 536

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 537 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 593

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 594 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 648

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   +V   + G  H   +  +  VY +G+ ++
Sbjct: 649 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 689



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 638

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    VV IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 639 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 698

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 699 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 530 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 587

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 588 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 644

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 645 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 696

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 697 --STGPITKPKKVIGLDGVAIQQISAGTSHS 725



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 33/189 (17%)

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
            +A + E   VY++G  +  +++        +P L      ++ +  G Y T V++S G 
Sbjct: 359 EAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISSDGS 418

Query: 309 LYTWGSNENGCLGIGSID-------VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
           +   G    G LG+G  +       +   P R     S S                 HT 
Sbjct: 419 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSD------------GHTL 466

Query: 362 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCG 419
           A  SEG++ +WG G              G+LGHGN     +P ++      K +  VS G
Sbjct: 467 AFTSEGEVFSWGDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 514

Query: 420 FNHTGALLE 428
           + H+ A+ E
Sbjct: 515 YRHSAAVSE 523


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4335



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4284 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4321

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4355



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4187

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4237

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4238 GIKKVACGTQFSVAL 4252



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 182/371 (49%), Gaps = 39/371 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E     V C   F+K S ++ +ACG  +T+ +T  G +Y+ G ND+
Sbjct: 36  WGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDY 95

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  +++ G +H+ A+   G+L+ WG NS GQLGL  
Sbjct: 96  GQLG-HERGRKRLQ--LILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNS 152

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K       P  V+ L      Q A G + ++A+T  G++ SWG+   G+LG G +     
Sbjct: 153 KNFMECS-PRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR--- 208

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                SE  P+LI  L GV +   A G  HS  I ++G ++ +G     ++   +  +  
Sbjct: 209 -----SEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRN 263

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG GS +    P +V   
Sbjct: 264 LPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQV--- 320

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + +++  +SCG +HT A+  S+G++  WG GG+            GQLG+ +
Sbjct: 321 -----MELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA------------GQLGNNS 363

Query: 396 DVDYIHPTIVN 406
                 P +V+
Sbjct: 364 TRSIPTPQVVH 374



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG      R R  +    +    K +ACG  HT+ + E G +++ G N  GQL
Sbjct: 91  GNNDYGQLG--HERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQL 148

Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L   + VQ++ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 149 GLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 208

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  P  +  L+G+     A G   S+A++  G +  WG    G+LG            
Sbjct: 209 SEVK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 258

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L   K+  AA G   S  +  +G V+  G     ++     N+   P 
Sbjct: 259 TQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 318

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S   + +P+ V GP
Sbjct: 319 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVHGP 376



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 48/353 (13%)

Query: 86  LTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
           L + G ++  G    G+LG   I + I   L P ++   K  E+ QI+ G +++  IT D
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEI--ILVPCQVDFKKASEIQQIACGENYTVVITHD 84

Query: 142 GELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
           G++Y  G N  GQLG   G+K  ++I        L     K+ A G   ++AV   G++ 
Sbjct: 85  GKIYSCGNNDYGQLGHERGRKRLQLIL------GLDAFVFKKVACGAYHTIAVNEWGQLF 138

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           SWG+   G+LG   ++ +        E +PR++K L    +   A G  H+  +  NG +
Sbjct: 139 SWGSNSEGQLGLNSKNFM--------ECSPRMVKTLGTSIIVQVACGMKHALALTNNGEL 190

Query: 260 YIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           Y +G  +  ++ L  +     +P LI+ L   P +  + CGGYH+  ++  G ++ WG N
Sbjct: 191 YSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAF-IACGGYHSIAISKSGAIFGWGKN 249

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
             G LG+      + P ++Q   +     +IC +    +CG + +  ++ +G + T G G
Sbjct: 250 TFGQLGLNDTQNRNLPHQLQTLRNA----KICYA----ACGEEFSVFLTVDGGVFTCGAG 301

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                         GQLGHG++ + I P  V         Q+SCG  HT AL+
Sbjct: 302 MY------------GQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 342


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4337



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTVL 4340



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 168/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G      L    E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4357



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 31/302 (10%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KMALSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
           LG G  + ++ P   E +QG F    + ++C             A  S G++  WG G  
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAG------SQSSLALTSTGQVYAWGCGAC 643

Query: 377 HG 378
            G
Sbjct: 644 LG 645



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G      +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSM 694



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 136/321 (42%), Gaps = 45/321 (14%)

Query: 121 LKKEVVQISTGYHHSSA------------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
           L +EV ++++ Y  + A            ++   E+Y+WG NS+ QL  G +  + I  P
Sbjct: 339 LFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQP 396

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
                 S   T +A  G   +  ++  G V + G G  GRLG G +S+    L+  +   
Sbjct: 397 KMALSFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEP 453

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
            R IK     KV  +     H+      G V+ +GD    K+     +  + P LI    
Sbjct: 454 HRSIK-----KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 508

Query: 289 YSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
             + VVC   GY H+  +T  GELYTWG  + G LG G  +  + P  V+          
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD--------- 559

Query: 346 ICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
             +++  VSCG  HT A+S+     W +GG             G+LGHG+      P +V
Sbjct: 560 -ISNVGEVSCGSSHTIALSKDGRTVWSFGGG----------DNGKLGHGDTNRVYKPKVV 608

Query: 406 NFGENVKALQVSCGFNHTGAL 426
              + +   +V  G   + AL
Sbjct: 609 EALQGMFIRKVCAGSQSSLAL 629



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G     A+  D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A+    +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4100

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4101 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4159

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4160 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4212

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4213 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4268

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4269 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4326



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4095 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4154

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4155 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4213

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4214 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4263

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4264 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4322

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4323 PTLVTVL 4329



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3990 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4046

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4047 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4105

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4106 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4162

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4163 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4214

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4215 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4274

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4275 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4312

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4313 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4346



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3962 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4017

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4018 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4067

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4068 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4126

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4127 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4178

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4179 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4228

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4229 GIKKVACGTQFSVAL 4243



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4337



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTVL 4340



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4357



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 59/385 (15%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 481 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CG 356
           G LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG
Sbjct: 592 GKLGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 647

Query: 357 WKHTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI- 400
                A        ++  +I+    G SH    S D      G++S GQ G GN    I 
Sbjct: 648 SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 401 HPTIVNFGENVKALQVSCGFNHTGA 425
            P  V+  + +   Q+S G +H+ A
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4107 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4165

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4166 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4218

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4219 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4275 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4332



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4101 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4160

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4161 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4220 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4269

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4270 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4328

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4329 PTLVTVL 4335



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3996 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4052

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4053 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4111

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4112 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4168

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4169 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4220

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4221 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4280

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4281 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4318

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4319 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4352



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 59/385 (15%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 481 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W--------- 357
           G LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W         
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 647

Query: 358 ---------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI- 400
                    K    ++  +I+    G SH    S D      G++S GQ G GN    I 
Sbjct: 648 SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 401 HPTIVNFGENVKALQVSCGFNHTGA 425
            P  V+  + +   Q+S G +H+ A
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3968 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4023

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4024 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4073

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4074 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4132

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4133 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4184

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4185 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4234

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4235 GIKKVACGTQFSVAL 4249



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4337



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTVL 4340



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4286 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4323

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4189

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4239

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4240 GIKKVACGTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|159486867|ref|XP_001701458.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158271640|gb|EDO97455.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 591

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 181/403 (44%), Gaps = 71/403 (17%)

Query: 38  RFAALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R    +GN D+GRLGLG  +L S   P V  A  ++ L+ LA GGAHT+ +T  G V+  
Sbjct: 3   RLLVAFGNADHGRLGLGATTLSSVMTPRVNLALARYDLENLAAGGAHTVVVTRGGLVFTF 62

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GLN  GQLG S     + EP  +  L + V  ++ G  H++ +T  G +Y +G N++GQL
Sbjct: 63  GLNTRGQLGHSAEADSAAEPGNVL-LPEPVAAVAAGDAHTACLTESGRVYTFGCNASGQL 121

Query: 156 GLGKKAAKVIP-------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           G+G+ A   IP        P  VE L+G      A G   S+AVT  G++ +WG G  GR
Sbjct: 122 GVGRDA---IPGGRSHSARPMLVEALTGQRVVSVAAGAAHSLAVTDSGRLYAWGLGDHGR 178

Query: 209 LGHGQESSILGFLRSTS------------------------------EYTPRLI--KELE 236
           LG G   S      S+                               E+ PR +    L 
Sbjct: 179 LGLGPPPSAASSSNSSCGSDGSSDSSSDRTSSSSSCSEGGGARSPWVEWLPRAVTTAALG 238

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-----------NHARRPSL-- 283
           G K     AG   SAC+DE GRVY +G  A+ ++    G           +    P L  
Sbjct: 239 GSKPAEVFAGPATSACMDEAGRVYTWGFGALHQLGHGAGAAAGGGGRATPDDEWEPRLVD 298

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP----ERVQGPFS 339
           +S L  +  +  GG H     +   ++ WGS+ +   GIGS+ ++           GP  
Sbjct: 299 VSSLRRTRRLALGGAHALACRTDERVHVWGSDPS---GIGSLGMMPGSGLGLGPAPGPLP 355

Query: 340 ESPVDQICTSIVL-----VSCGWKHTAAI-SEGKILTWGWGGS 376
            S V     +I       V+ G  H+A + S+GK+  WGWGG+
Sbjct: 356 GSAVVIPAPTIFRWWFTDVAAGLAHSAGVSSDGKLFAWGWGGA 398


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4335



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4284 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4321

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH  + S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4187

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4237

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4238 GIKKVACGTQFSVAL 4252



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 56/362 (15%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQISTGYHHSSA-- 137
           C  A  +     LG S +     EP R S            L +EV ++++ Y  + A  
Sbjct: 298 CFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASP 357

Query: 138 ----------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
                     ++   E+Y+WG NS+ QL  G +  + I  P      S   T +A  G  
Sbjct: 358 DSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQY 413

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  ++  G V + G G  GRLG G +S+    L+  +    R IK     KV  +    
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEPHRSIK-----KVSSSKGSD 467

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLT 304
            H+      G V+ +GD    K+     +  + P LI      + VVC   GY H+  +T
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             GELYTWG  + G LG G  +  + P  V+            +++  VSCG  HT A+S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD----------ISNVGEVSCGSSHTIALS 577

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +     W +GG             G+LGHG+      P ++   + +   +V  G   + 
Sbjct: 578 KDGRTVWSFGGG----------DNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 425 AL 426
           AL
Sbjct: 628 AL 629



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4121 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4346



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4234 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4343 PTLVTVL 4349



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4010 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4066

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4067 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4125

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4126 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4182

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4183 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4234

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4235 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4294

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4295 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4332

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4333 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4366



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W----------- 357
           LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W           
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 358 -------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
                  K    ++  +I+    G SH  + S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4037

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4198

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4199 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4248

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4249 GIKKVACGTQFSVAL 4263



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 56/362 (15%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQISTGYHHSSA-- 137
           C  A  +     LG S +     EP R S            L +EV ++++ Y  + A  
Sbjct: 298 CFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASP 357

Query: 138 ----------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
                     ++   E+Y+WG NS+ QL  G +  + I  P      S   T +A  G  
Sbjct: 358 DSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQY 413

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  ++  G V + G G  GRLG G +S+    L+  +    R IK     KV  +    
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEPHRSIK-----KVSSSKGSD 467

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLT 304
            H+      G V+ +GD    K+     +  + P LI      + VVC   GY H+  +T
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             GELYTWG  + G LG G  +  + P  V+            +++  VSCG  HT A+S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD----------ISNVGEVSCGSSHTIALS 577

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +     W +GG             G+LGHG+      P ++   + +   +V  G   + 
Sbjct: 578 KDGRTVWSFGGG----------DNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 425 AL 426
           AL
Sbjct: 628 AL 629



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4335



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4284 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4321

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH  + S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4187

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4237

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4238 GIKKVACGTQFSVAL 4252



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 56/362 (15%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQISTGYHHSSA-- 137
           C  A  +     LG S +     EP R S            L +EV ++++ Y  + A  
Sbjct: 298 CFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASP 357

Query: 138 ----------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
                     ++   E+Y+WG NS+ QL  G +  + I  P      S   T +A  G  
Sbjct: 358 DSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQY 413

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  ++  G V + G G  GRLG G +S+    L+  +    R IK     KV  +    
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEPHRSIK-----KVSSSKGSD 467

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLT 304
            H+      G V+ +GD    K+     +  + P LI      + VVC   GY H+  +T
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             GELYTWG  + G LG G  +  + P  V+            +++  VSCG  HT A+S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD----------ISNVGEVSCGSSHTIALS 577

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +     W +GG             G+LGHG+      P ++   + +   +V  G   + 
Sbjct: 578 KDGRTVWSFGGG----------DNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 425 AL 426
           AL
Sbjct: 628 AL 629



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2757

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 2758 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2816

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 2817 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2869

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 2870 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2925

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 2926 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 2983



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 2752 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2811

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 2812 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 2871 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2920

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 2921 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2979

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 2980 PTLVTVL 2986



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 2647 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 2703

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 2704 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 2762

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 2763 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 2819

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 2820 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 2871

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 2872 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 2931

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 2932 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 2969

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 2970 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 3003



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 2619 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 2674

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 2675 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2724

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 2725 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2783

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 2784 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 2835

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 2836 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 2885

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 2886 GIKKVACGTQFSVAL 2900


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4121 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4346



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4234 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4343 PTLVTVL 4349



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4010 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4066

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4067 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4125

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4126 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4182

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4183 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4234

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4235 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4294

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4295 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4332

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4366



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4037

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4198

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4199 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4248

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4249 GIKKVACGTQFSVAL 4263



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4335



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4284 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4321

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH  + S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4187

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4237

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4238 GIKKVACGTQFSVAL 4252



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 56/362 (15%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQISTGYHHSSA-- 137
           C  A  +     LG S +     EP R S            L +EV ++++ Y  + A  
Sbjct: 298 CFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASP 357

Query: 138 ----------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
                     ++   E+Y+WG NS+ QL  G +  + I  P      S   T +A  G  
Sbjct: 358 DSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQY 413

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  ++  G V + G G  GRLG G +S+    L+  +    R IK     KV  +    
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEPHRSIK-----KVSSSKGSD 467

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLT 304
            H+      G V+ +GD    K+     +  + P LI      + VVC   GY H+  +T
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             GELYTWG  + G LG G  +  + P  V+            +++  VSCG  HT A+S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD----------ISNVGEVSCGSSHTIALS 577

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +     W +GG             G+LGHG+      P ++   + +   +V  G   + 
Sbjct: 578 KDGRTVWSFGGG----------DNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 425 AL 426
           AL
Sbjct: 628 AL 629



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4335



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4284 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4321

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH  + S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4187

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4237

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4238 GIKKVACGTQFSVAL 4252



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 56/362 (15%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQISTGYHHSSA-- 137
           C  A  +     LG S +     EP R S            L +EV ++++ Y  + A  
Sbjct: 298 CFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASP 357

Query: 138 ----------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
                     ++   E+Y+WG NS+ QL  G +  + I  P      S   T +A  G  
Sbjct: 358 DSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQY 413

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  ++  G V + G G  GRLG G +S+    L+  +    R IK     KV  +    
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEPHRSIK-----KVSSSKGSD 467

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLT 304
            H+      G V+ +GD    K+     +  + P LI      + VVC   GY H+  +T
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             GELYTWG  + G LG G  +  + P  V+            +++  VSCG  HT A+S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD----------ISNVGEVSCGSSHTIALS 577

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +     W +GG             G+LGHG+      P ++   + +   +V  G   + 
Sbjct: 578 KDGRTVWSFGGG----------DNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 425 AL 426
           AL
Sbjct: 628 AL 629



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1722

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 1723 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1781

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K +P   +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 1782 TSNKKLP--ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1834

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 1835 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1890

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 1891 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 1948



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 1717 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1776

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 1777 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1835

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 1836 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1885

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 1886 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 1944

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 1945 PTLVTVL 1951



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 169/394 (42%), Gaps = 47/394 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 1612 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 1668

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 1669 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 1727

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 1728 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 1784

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 1785 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 1836

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 1837 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 1896

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 1897 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 1934

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G+      PT+V   +     Q+S G  H+ A
Sbjct: 1935 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 1968



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 1584 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1639

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 1640 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1689

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 1690 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1748

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 1749 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 1800

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 1801 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 1850

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 1851 GIKKVACGTQFSVAL 1865


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
           G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 266

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 267 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 325

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
            + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 326 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 378

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
               ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 379 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 434

Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 435 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 492



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 261 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 320

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
           LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 321 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 380 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 429

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 430 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 488

Query: 281 PSLISKL 287
           P+L++ L
Sbjct: 489 PTLVTVL 495



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 169/394 (42%), Gaps = 47/394 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 156 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 212

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
           +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 213 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 271

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 272 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 328

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEGN 276
                   +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 329 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 380

Query: 277 HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 381 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 440

Query: 335 QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                      +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 441 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 478

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G G+      PT+V   +     Q+S G  H+ A
Sbjct: 479 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 512



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 128 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 183

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 184 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 233

Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
             V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 234 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 292

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
              CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 293 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 344

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 345 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 394

Query: 412 KALQVSCGFNHTGAL 426
              +V+CG   + AL
Sbjct: 395 GIKKVACGTQFSVAL 409


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4108

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4109 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4167

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4168 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGN----- 4220

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4221 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4276

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4277 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4334



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S++ ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4103 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4162

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4163 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS 4221

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4222 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4271

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4272 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4330

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4331 PTLVTVL 4337



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3998 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4054

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4055 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4113

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4114 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4170

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4171 --------KKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNST 4222

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4223 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4282

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4283 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4320

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4321 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4354



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3970 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4025

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4026 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4075

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4076 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4134

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4135 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4186

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4187 QVACGLNHTLAVSSDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4236

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4237 GIKKVACGTQFSVAL 4251



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IRKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 195/410 (47%), Gaps = 50/410 (12%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTET 89
           +   L +    +WG+ +YG+ G    E    P +        S+  ++CG  ++  +T +
Sbjct: 1   MGQNLSKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNS 60

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           G +   G    GQLG   N+   L P R++   K VVQ++    H++AI  +GELY WG 
Sbjct: 61  GDLILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVVQVACSDRHTAAILSNGELYTWGC 118

Query: 150 NSNGQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           + NG+LG G+     +  V+  P KV+ L G    Q + G   +  +T   K L+WG G 
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGL 178

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            GRLGHG    I         +TP+LI+ L G+ +K  + G  H+A +   G++Y+FG  
Sbjct: 179 QGRLGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGG 229

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           A  K+ F   +    P L+   P  +    +V  G  H+  +T  G++YTWG  + G LG
Sbjct: 230 AFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG--QGGRLG 286

Query: 322 IGSIDVLHSPER-VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
                + + PE     P   S +++    IV +SCG  H+ A+S+ G I TWG   +   
Sbjct: 287 ----HIFNGPEHDFLSPKRLSNLEK--AFIVDISCGNSHSVALSDVGDIYTWGMTKN--- 337

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVN---FGENVKALQVSCGFNHTGAL 426
                      +GHG  +  IHP + +     +N   +QV C  +H+ AL
Sbjct: 338 -----------IGHG--IQGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 160/336 (47%), Gaps = 36/336 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG G  G+LG G+LE    P V  + +  ++  +AC   HT  +   G +Y  G +  G
Sbjct: 65  LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNG 122

Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
           +LG       IS N+    +P+++  L+ E V+Q+S G +H+  +T D +   WG    G
Sbjct: 123 KLGHGQFELSISNNV--VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G    + I  P  +E L+G+  K+ + G   +  +   GK+  +G G  G+LG G 
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238

Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              +L          PRL++  LE +++   + G  HSA + + G+VY +G       +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289

Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
               H    P  +S L   +  ++ CG  H+  L+  G++YTWG  +N   GI  I   H
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGI---H 346

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
                + P  ++       +IV V C   H+ A+S+
Sbjct: 347 PNMPSKHPILQN------KNIVQVVCSSSHSIALSD 376



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 16/201 (7%)

Query: 229 PRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           P L+  L  +  +   + G  +SA I  +G + ++G     ++ F        P +   L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
               +V C   HT  + S GELYTWG ++NG LG G  ++  S   V  P     ++   
Sbjct: 92  KNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEG-- 149

Query: 348 TSIVLVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
             ++ VSCG  HT  +++  K LTWG G              G+LGHG+  D   P ++ 
Sbjct: 150 EKVIQVSCGSYHTGCLTDDKKALTWGLGLQ------------GRLGHGDTQDIFTPKLIE 197

Query: 407 FGENVKALQVSCGFNHTGALL 427
               +   ++SCG +HT  LL
Sbjct: 198 SLAGLPIKEISCGGHHTAILL 218



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 29/144 (20%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V CG  ++  +T+ G+L  WG    G LG G+++    P           V+    ++V
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPR----------VNLSLKNVV 95

Query: 352 LVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
            V+C  +HTAAI S G++ TWG             S  G+LGHG     I   +V+    
Sbjct: 96  QVACSDRHTAAILSNGELYTWGC------------SKNGKLGHGQFELSISNNVVSQPMK 143

Query: 411 VKAL------QVSCGFNHTGALLE 428
           VKAL      QVSCG  HTG L +
Sbjct: 144 VKALEGEKVIQVSCGSYHTGCLTD 167


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 157/299 (52%), Gaps = 21/299 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4336



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTVL 4339



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4284

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4285 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4322

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 4323 GLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4188

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4189 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4238

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4239 GIKKVACGTQFSVAL 4253



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 189/385 (49%), Gaps = 46/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G G YG+LG G   ++  P          ++A+A G  H+L LT++G VY+ G   FG+
Sbjct: 52  FGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGLFGR 109

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N    LEP +I GL  ++  I+ G  HS A+T  G++Y +G   NG  GLG    
Sbjct: 110 LGHG-NTDSQLEPKKIEGL-SDIQAIAAGDFHSLALTKSGDVYSFG---NGTSGLGHGNT 164

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P K+E LS +  +  A G   S+A+T  G V S+G G  GRLGHG          
Sbjct: 165 EDQSTPKKIESLSDV--QAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGD--------- 213

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + S+  P+ I++L  ++    AAG  HS  + ++G VY FG     ++   +  +   P 
Sbjct: 214 TDSQLEPKKIEDLSDIQA--IAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPK 271

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            I  L   + V  G  H+  LT  GE+Y++G    G LG G  D   +P++++G      
Sbjct: 272 KIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEG------ 325

Query: 343 VDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                  I  ++ G  H+ A+++ G + ++G G           +SG  LGHG+  + + 
Sbjct: 326 ----LKDIQAIAAGDFHSLALTKSGDVYSFGNG-----------TSG--LGHGDTANQLE 368

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  +    +++A  ++ G NH+ AL
Sbjct: 369 PKKIEGLTDIQA--IAAGANHSLAL 391



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 168/338 (49%), Gaps = 45/338 (13%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            V++ G+  +G+LG  +     L P +I GL  ++  I+ G +HS A+T  G++Y +G  
Sbjct: 48  SVFSFGMGMYGKLGHGDTAN-QLAPKKIEGLS-DIQAIAAGTNHSLALTKSGDVYSFGFG 105

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             G+LG G   +++ P   K+E LS I  +  A G   S+A+T  G V S+G G SG LG
Sbjct: 106 LFGRLGHGNTDSQLEP--KKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG          +  + TP+ I+ L  V+    AAG  HS  + ++G VY FG     ++
Sbjct: 161 HG---------NTEDQSTPKKIESLSDVQA--IAAGGNHSLALTKSGDVYSFGFGLFGRL 209

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
              + +    P  I  L   + +  GG H+  LT  G++Y++G   +G LG G  +   +
Sbjct: 210 GHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLT 269

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P++++            + I  V+ G  H+ A+++ G++ ++G G +            G
Sbjct: 270 PKKIED----------LSDIQAVAAGANHSLALTKSGEVYSFGRGNT------------G 307

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGAL 426
           QLGHG+  D + P  +   E +K +Q ++ G  H+ AL
Sbjct: 308 QLGHGDTDDQLTPKKI---EGLKDIQAIAAGDFHSLAL 342


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 179/387 (46%), Gaps = 45/387 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LG G+      PV+       ++  ALA G +HT+ + + G V+A GLN  G
Sbjct: 481 WGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASG 540

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    I   + P++I GL   V  I+ G  H+ A   DG ++ WG NS GQLG G   
Sbjct: 541 QLGDGATIDRRI-PVQIPGLAG-VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTT 598

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++ P+  +V  L+G+     A G   SVA+   G V +WG    G+LG G  ++ L   
Sbjct: 599 HRLSPV--QVPGLTGV--SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARL--- 651

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
                 TP  +  L GV     AAG LH+  + ++G V+ +G    D     +G   RR 
Sbjct: 652 ------TPVQVHGLTGVTA--VAAGSLHTVALRQDGTVWAWGYN--DLGQLGDGTTTRRL 701

Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +  L     +  G +HT  +   G ++ WG N  G LG GS     +P +VQ    
Sbjct: 702 APVQVQGLTDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQ---- 757

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                   T +  ++ G+ HT A+ +   + W WG          ++SG QLG+G+  D 
Sbjct: 758 ------ELTGVSALAAGYAHTVAVKQDGTV-WAWG----------NNSGTQLGNGSSTDR 800

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             P  V     V AL  + G  HT A+
Sbjct: 801 YTPVWVEGLTGVSAL--TAGRFHTAAV 825



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 46/395 (11%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           Q   A  WGN  +G+LG G+   R  PV         + A+A G  HT  + + G V+A 
Sbjct: 24  QDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLT--GVTAVAAGRHHTFAVRQDGTVWAW 81

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GLN +GQLG   +      P+++ GL   V  I+ G  H+ A++ DG ++ WG N  GQL
Sbjct: 82  GLNVWGQLGDGTHT-ERHTPVQVPGLTG-VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQL 139

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G +A +  P+  ++  L+G+     A G   + AV   G V +WG    G+LG G   
Sbjct: 140 GDGTRADRHTPV--QLPELTGV--TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTR- 194

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                   T+  TP  +  L GV     AAG  H+  + ++G V+ +G+ A+ ++   +G
Sbjct: 195 --------TNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTVWAWGNNALGQL--GDG 242

Query: 276 NHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  R  P  +  L     +  G  HT  +   G ++ WG N  G LG G+     +P +
Sbjct: 243 TYTERLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQ 302

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
           V G           + +  ++ G +HT A+ +   + W W          G +  GQLG 
Sbjct: 303 VPG----------LSGVTAIAEGRRHTFAVRQDGTV-WAW----------GLNFWGQLGD 341

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G   D + P  V    +V A  ++ G  HT A+ +
Sbjct: 342 GTRSDRLTPVQVPDLTSVTA--IAAGDYHTLAVRQ 374



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 164/367 (44%), Gaps = 40/367 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV         + A+A G AHTL   + G V++ G N +GQ
Sbjct: 534 WGLNASGQLGDGATIDRRIPVQIPGLA--GVTAIAAGSAHTLAAGQDGAVWSWGANSYGQ 591

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + L P+++ GL   V  ++ G  HS A+  DG +  WG+NS GQLG G  AA
Sbjct: 592 LGDGTTT-HRLSPVQVPGLTG-VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAA 649

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+G+     A G   +VA+   G V +WG    G+LG G          
Sbjct: 650 RLTPV--QVHGLTGV--TAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGT--------- 696

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P  ++ L    V   AAG+ H+  + ++G V+ +G     ++          P 
Sbjct: 697 TTRRLAPVQVQGL--TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPV 754

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            + +L     +  G  HT  +   G ++ WG+N    LG GS    ++P  V+G      
Sbjct: 755 QVQELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEG------ 808

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                T +  ++ G  HTAA+S  +   W W          G ++ GQ+G G   D   P
Sbjct: 809 ----LTGVSALTAGRFHTAAVSP-EGFGWAW----------GRNNFGQVGDGTTADRPRP 853

Query: 403 TIVNFGE 409
             V   E
Sbjct: 854 VDVVIQE 860



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 160/358 (44%), Gaps = 44/358 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + A   G  HT+ + + G  +A G N +GQLG        L P+++ GL   V  ++ G 
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTD-RLTPVQVPGLTG-VTAVAAGR 66

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           HH+ A+  DG ++ WG N  GQLG G    +  P+  +V  L+G+     A G   + AV
Sbjct: 67  HHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPV--QVPGLTGV--TAIAAGRRHTFAV 122

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           +  G V +WG    G+LG G  +           +TP  + EL GV     AAG  H+  
Sbjct: 123 SQDGTVWAWGDNDWGQLGDGTRA---------DRHTPVQLPELTGVTA--IAAGRRHTFA 171

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
           + ++G V+ +GD A  ++   +G    R  P  +  L     +  G YHT  +   G ++
Sbjct: 172 VRQDGTVWAWGDNAWGQL--GDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVW 229

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            WG+N  G LG G+     +P +V G           T +  +S G  HT A+ +   + 
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPG----------LTGVTAISAGESHTVAVRQDGTV- 278

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           W W          G +  GQLG G   D + P  V     V A  ++ G  HT A+ +
Sbjct: 279 WAW----------GDNVWGQLGDGTRTDRLTPVQVPGLSGVTA--IAEGRRHTFAVRQ 324



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 174/392 (44%), Gaps = 51/392 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+   R  PV         + A+A G  HT  + + G V+A GLN +GQ
Sbjct: 281 WGDNVWGQLGDGTRTDRLTPVQVPGLS--GVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQ 338

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++  L   V  I+ G +H+ A+  DG ++ WG N  GQLG G    
Sbjct: 339 LGDGTR-SDRLTPVQVPDLTS-VTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTD 396

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+G+     A G   +VA+   G V +WG    G+LG G          
Sbjct: 397 RLTPV--QVPGLTGV--TAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTY-------- 444

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  + +L    V   AAG  H+  + ++G V  +G  A  ++   +G  +R PS
Sbjct: 445 -TDRLTPVQVPDL--TSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQL--GDGTSSRSPS 499

Query: 283 LI-----SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            +     + +     +  G  HT  +   G ++ WG N +G LG G+      P ++ G 
Sbjct: 500 PVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPG- 558

Query: 338 FSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                       +  ++ G  HT AA  +G + +W            G +S GQLG G  
Sbjct: 559 ---------LAGVTAIAAGSAHTLAAGQDGAVWSW------------GANSYGQLGDGTT 597

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              + P  V     V A+  + G  H+ ALL+
Sbjct: 598 THRLSPVQVPGLTGVSAM--AAGDAHSVALLQ 627



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 21/251 (8%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           LQ    + WG   +G+LG G+  +R  PV         + A+A G  HT+ L + G V+A
Sbjct: 626 LQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT--GVTAVAAGSLHTVALRQDGTVWA 683

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G ND GQLG        L P+++ GL  +V  I+ GY H+ A+  DG ++ WG N  GQ
Sbjct: 684 WGYNDLGQLGDGTTT-RRLAPVQVQGLT-DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   A+  P+  +V+ L+G+     A G+  +VAV   G V +WG     +LG+G  
Sbjct: 742 LGDGSSTARSTPV--QVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGS- 796

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   ST  YTP  ++ L GV      AG  H+A +   G  + +G     ++   +
Sbjct: 797 --------STDRYTPVWVEGLTGVSALT--AGRFHTAAVSPEGFGWAWGRNNFGQV--GD 844

Query: 275 GNHARRPSLIS 285
           G  A RP  + 
Sbjct: 845 GTTADRPRPVD 855


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 170/336 (50%), Gaps = 35/336 (10%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4203 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4261

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    + A G   ++ V T G  V ++G G  G+LG G      
Sbjct: 4262 TSNK--KLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGN----- 4314

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4315 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4370

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  +  L   + E++  G  HT  L++ G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4371 -NRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4429

Query: 335  --QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
              QG            S+  +S G  H+AA S   +
Sbjct: 4430 SLQG-----------KSVRQISAGRCHSAAWSSPPV 4454



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 430 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 488

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 489 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 548

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 549 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 604

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 605 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 654

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 655 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 714

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 715 SG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 747



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4197 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4256

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ +++ G +H+  ++ DG + + +G    G+LGLG  
Sbjct: 4257 LGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4316 TAKS--SPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4365

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV V+  A G  H+  +  +G VY +G  +  ++     NH R 
Sbjct: 4366 -RARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVRE 4424

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4425 PTLVTSL 4431



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 170/398 (42%), Gaps = 55/398 (13%)

Query: 42   LWGNGDYGRL---GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            LWG G +G+L   G  ++     P  C A      + + CG   T  +   G V A G  
Sbjct: 4092 LWGAGRHGQLAEAGRNAVSPPPSPSFCQA------QQVICGQNCTFVIQANGTVLACGEG 4145

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQ 154
             +G+LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+
Sbjct: 4146 SYGRLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  
Sbjct: 4205 LGHGNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN- 4261

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
                    ++++  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+   
Sbjct: 4262 --------TSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLG 4313

Query: 274  EGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P
Sbjct: 4314 NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP 4373

Query: 332  ERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 387
            ++V    G F E            ++ G +HT A+S  G +  WG             +S
Sbjct: 4374 QQVPALSGVFVED-----------IAVGAEHTLALSASGDVYAWG------------SNS 4410

Query: 388  GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             GQLG G+      PT+V   +     Q+S G  H+ A
Sbjct: 4411 EGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 175/388 (45%), Gaps = 59/388 (15%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           G     ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  
Sbjct: 364 GGDAPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFV 419

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGG 196
           I+ DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G
Sbjct: 420 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 479

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
           +V SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E
Sbjct: 480 EVFSWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGS 314
           +G +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G 
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 590

Query: 315 NENGCLGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS------------- 354
            +NG LG G  + ++ P   E +QG F    + ++C    +S+ L S             
Sbjct: 591 GDNGKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACL 646

Query: 355 -CGWKHTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVD 398
            CG     A        ++  +I+    G SH    S D      G++S GQ G GN   
Sbjct: 647 GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 706

Query: 399 YI-HPTIVNFGENVKALQVSCGFNHTGA 425
            I  P  V+  + V   Q+S G +H+ A
Sbjct: 707 PITKPKKVSGLDGVAIQQISAGTSHSLA 734



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 39/290 (13%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +GQL    + A V P P+   C +    +Q   G   +  +   G VL+ G
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNA-VSPPPSPSFCQA----QQVICGQNCTFVIQANGTVLACG 4143

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 4144 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4194

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+G+ +
Sbjct: 4195 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4253

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
             G LG+G+      PERV               I  V+CG  HT  +S    + W +G  
Sbjct: 4254 YGRLGLGNTSNKKLPERVAALEG--------YQIGEVACGLNHTLVVSTDGSMVWAFG-- 4303

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  DG    G+LG GN      P  V+    +   +V+CG   + AL
Sbjct: 4304 ------DGDY--GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4345



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 484 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 543

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 544 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 600

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 601 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 655

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 656 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 696



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 645

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 646 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 705

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 706 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 537 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 594

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 595 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 651

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 652 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 703

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 704 --STGPITKPKKVSGLDGVAIQQISAGTSHS 732



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 19/181 (10%)

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           +  + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +
Sbjct: 367 APVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 426

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKI 368
              G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++
Sbjct: 427 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEV 481

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALL 427
            +WG G              G+LGHGN     +P ++      K +  VS G+ H+ A+ 
Sbjct: 482 FSWGDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 529

Query: 428 E 428
           E
Sbjct: 530 E 530


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 21/296 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4115

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+Q+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4116 GKLGHG-NSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4174

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4175 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4227

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4228 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4283

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P
Sbjct: 4284 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4338



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4110 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4169

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4170 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4228

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4229 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4278

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4279 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4337

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4338 PTLITVL 4344



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + V   Q+S G +H+ A
Sbjct: 710 KKVSGLDGVAIQQISAGTSHSLA 732



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4005 LWGAGRHGQLAEAG-RNVMIPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4061

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4062 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4120

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4121 GNSDRQRRP--RQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4177

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4178 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4229

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4230 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4289

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4290 P----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQL 4327

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT++    G+N++  Q+S G  H+ A
Sbjct: 4328 GLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4361



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3977 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 4032

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4033 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4082

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEV+
Sbjct: 4083 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4141

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4142 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4193

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4194 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4243

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4244 GIKKVACGTQFSVAL 4258



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 156/296 (52%), Gaps = 21/296 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4040

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+Q+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4041 GKLG-HGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4099

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4100 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4152

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4153 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4208

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              RP  I  L     E++  G  HT  L S G++Y WGSN  G LG+G  + +  P
Sbjct: 4209 -NRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4263



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4035 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4094

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4095 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4153

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4154 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4203

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4204 -RARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4262

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4263 PTLITIL 4269



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVSCG----W----------- 357
           LG G  + ++ P   E +QG F    + ++C    +S+ L S G    W           
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 358 -------KHTAAISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
                  K    ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + V   Q+S G +H+ A
Sbjct: 710 KKVSGLDGVAIQQISAGTSHSLA 732



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3930 LWGAGRHGQLAEAG-RNVMIPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 3986

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3987 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4045

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4046 GNSDRQRRP--RQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4102

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4103 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4154

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4155 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4214

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +V+  ++ G +HT A+ S G +  WG             +S GQL
Sbjct: 4215 P----------VLAGVVIEDIAVGAEHTLALASTGDVYAWG------------SNSEGQL 4252

Query: 392  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            G G+      PT++    G+N++  Q+S G  H+ A
Sbjct: 4253 GLGHTNHVREPTLITILQGKNIR--QISAGRCHSAA 4286



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3902 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 3957

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3958 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4007

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEV+
Sbjct: 4008 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4066

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4067 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4118

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 4119 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 4168

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4169 GIKKVACGTQFSVAL 4183



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 194/407 (47%), Gaps = 50/407 (12%)

Query: 34  TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
            L +    +WG+ +YG+ G    E    P +        S+  ++CG  ++  +T +G +
Sbjct: 4   NLSKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
              G    GQLG   N+   L P R++   K V+Q++    H++AI  +GELY WG + N
Sbjct: 64  ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKN 121

Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           G+LG G+     +  V+  P KV+ L G    Q + G   +  +T   K L+WG G  GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG    I         +TP+LI+ L G+ +K  + G  H+A +   G++Y+FG  A  
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           K+ F   +    P L+   P  +    +V  G  H+  +T  G++YTWG  + G LG   
Sbjct: 233 KLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG--QGGRLG--- 286

Query: 325 IDVLHSPER-VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             + + PE     P   S +++    IV +SCG  H+ A+S+ G I TWG   +      
Sbjct: 287 -HIFNGPEHDFLSPKRLSNLEK--AFIVDISCGNSHSVALSDVGDIYTWGMTKN------ 337

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVN---FGENVKALQVSCGFNHTGAL 426
                   +GHG  +  IHP + +     +N   +QV C  +H+ AL
Sbjct: 338 --------IGHG--IQGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 160/336 (47%), Gaps = 36/336 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG G  G+LG G+LE    P V  + +  ++  +AC   HT  +   G +Y  G +  G
Sbjct: 65  LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDRHTAAILSNGELYTWGCSKNG 122

Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
           +LG       IS N+    +P+++  L+ E V+Q+S G +H+  +T D +   WG    G
Sbjct: 123 KLGHGQFELSISNNV--VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G    + I  P  +E L+G+  K+ + G   +  +   GK+  +G G  G+LG G 
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238

Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              +L          PRL++  LE +++   + G  HSA + + G+VY +G       +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289

Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
               H    P  +S L   +  ++ CG  H+  L+  G++YTWG  +N   GI  I   H
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGI---H 346

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
                + P  ++       +IV V C   H+ A+S+
Sbjct: 347 PNMPSKHPILQN------KNIVQVVCSSSHSIALSD 376



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 16/201 (7%)

Query: 229 PRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           P L+  L  +  +   + G  +SA I  +G + ++G     ++ F        P +   L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
               +V C   HT  + S GELYTWG ++NG LG G  ++  S   V  P     ++   
Sbjct: 92  KNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEG-- 149

Query: 348 TSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
             ++ VSCG  HT  +++ K  LTWG G              G+LGHG+  D   P ++ 
Sbjct: 150 EKVIQVSCGSYHTGCLTDDKKALTWGLGLQ------------GRLGHGDTQDIFTPKLIE 197

Query: 407 FGENVKALQVSCGFNHTGALL 427
               +   ++SCG +HT  LL
Sbjct: 198 SLAGLPIKEISCGGHHTAILL 218



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 29/144 (20%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V CG  ++  +T+ G+L  WG    G LG G+++    P           V+    +++
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPR----------VNLSLKNVI 95

Query: 352 LVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
            V+C  +HTAAI S G++ TWG             S  G+LGHG     I   +V+    
Sbjct: 96  QVACSDRHTAAILSNGELYTWGC------------SKNGKLGHGQFELSISNNVVSQPMK 143

Query: 411 VKAL------QVSCGFNHTGALLE 428
           VKAL      QVSCG  HTG L +
Sbjct: 144 VKALEGEKVIQVSCGSYHTGCLTD 167


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 36/396 (9%)

Query: 41  ALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A+WG    G+LG+G  +   + R  +  + E+  L  +A G  H+L +T +G VY TG N
Sbjct: 4   AVWGATGAGQLGIGDADGTGKTRVTLVPSLEQE-LAFVATGYYHSLAITRSGTVYTTGKN 62

Query: 99  DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           D  QLG S   G   +  R++ L+    V  + G   S  +   G++Y WG    GQLGL
Sbjct: 63  DRRQLGRS---GDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQLGL 119

Query: 158 GKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           G++A +    +P  V+ L   F    A G    +A+T  G+V SWG G  G+LG GQ   
Sbjct: 120 GREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQ--- 176

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                   S ++P +I +L G  V   AAG  +S  +    +VY FG  +  ++   +  
Sbjct: 177 ------FVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT 230

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP+L+  L   +   V  G +HT   T  G LY WGSN+ G LG+GS       + V
Sbjct: 231 ARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGS-----EADSV 285

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED-GHSSGGQLGH 393
             P   + + +I   ++ VS G +HT A+    I T    G+  T +   G ++ GQLG 
Sbjct: 286 AAPTEITHILEIG-RVLEVSAGRRHTVAL----IRTVTETGAQATVAVAFGANNTGQLGL 340

Query: 394 GND------VDYIHPTIVNFGENVKALQVSCGFNHT 423
             D          HP  +    ++  +++  G NHT
Sbjct: 341 DPDHPASKRTQLFHPVRLKRISSMHPIKLIAGGNHT 376



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 25/234 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG G   SR  P V +      + ++A G  ++L +T    VYA G N  GQ
Sbjct: 164 WGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQ 223

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +       P  +  L  K+V  ++ G  H+ A T  G LY WG N  GQLGLG +A
Sbjct: 224 LGVGDTTA-RFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEA 282

Query: 162 AKVIPIPTKV-------ECLSGIFTKQAALGFEQSVAVTGGGKV--LSWGAGGSGRLGHG 212
             V   PT++         L     ++  +   ++V  TG      +++GA  +G+LG  
Sbjct: 283 DSVA-APTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGLD 341

Query: 213 QESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
            +       + T  + P  +K +  +  +K+ A G         N  + IFG++
Sbjct: 342 PDHPA---SKRTQLFHPVRLKRISSMHPIKLIAGG---------NHTIMIFGEQ 383



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 109/272 (40%), Gaps = 60/272 (22%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V  WGA G+G+LG G      G  ++     P L +EL  V     A G+ HS  I  +G
Sbjct: 3   VAVWGATGAGQLGIGDAD---GTGKTRVTLVPSLEQELAFV-----ATGYYHSLAITRSG 54

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
            VY  G    D+          + + ++ L     V    G   + V+ S G++YTWG  
Sbjct: 55  TVYTTGKN--DRRQLGRSGDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGG 112

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCGWKHTAAIS-EGKILTWGW 373
           E G LG+G  + + +  RV       PV  +  + V+ V+CG +H  A++ +G++ +WG 
Sbjct: 113 ERGQLGLGR-EAMETGSRV-----PRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGE 166

Query: 374 GGS----HGTFSED------------------------------------GHSSGGQLGH 393
           G       G F                                       G +S GQLG 
Sbjct: 167 GADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGV 226

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G+      PT+V F +  +   V+ G  HT A
Sbjct: 227 GDTTARFRPTLVRFLDGKQVCHVTAGDFHTLA 258


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 171/388 (44%), Gaps = 43/388 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS   R  PV  S      + A+A GGAHT  LT +G V   G N FGQ
Sbjct: 84  WGYNWSGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGGVMCWGGNYFGQ 142

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G ++ WG N +GQLG G    
Sbjct: 143 LGDGSYTDRS-TPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIY 201

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+   V  L    T  AA G+  + A+TG G V  WG  G G+LG G          
Sbjct: 202 HITPV--AVSGLPSEVTAIAA-GYAHTCALTGSGGVWCWGDNGFGQLGDGSF-------- 250

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            T   TP  +  L      IAA G  ++  +  +G V+ +G    D     +G+   R  
Sbjct: 251 -TDSSTPAAVGGLPSGVTAIAAGG-RYTCALTSSGGVWCWGRN--DSGQLGDGSFTNRST 306

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P  +  LP     +  GG HTC LTS G ++ WG N++G LG GS     +P  V G   
Sbjct: 307 PGAVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSG--- 363

Query: 340 ESPVDQICTSIVLVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                 + + +  ++ G  HT A  S G +  WG     G F        GQLG G   D
Sbjct: 364 ------LPSGVTAIAAGGAHTCARTSSGGVWCWG-----GNFY-------GQLGDGTTTD 405

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGAL 426
              P  V+ G       ++ G  HT AL
Sbjct: 406 RSTPGAVS-GLPSGVTAIAAGNYHTCAL 432



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 172/394 (43%), Gaps = 51/394 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG GS   R  PV  S      + A+A GGAHT  L  +G V+  G N  GQ
Sbjct: 135 WGGNYFGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALMSSGGVWCWGYNLSGQ 193

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I Y + P+ +SGL  EV  I+ GY H+ A+T  G ++ WG N  GQLG G    
Sbjct: 194 LGDGSTI-YHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTD 252

Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              P     +P+ V  +        A G   + A+T  G V  WG   SG+LG G     
Sbjct: 253 SSTPAAVGGLPSGVTAI--------AAGGRYTCALTSSGGVWCWGRNDSGQLGDGSF--- 301

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 T+  TP  +  L      IAA G  H+  +  +G V+ +G    D     +G++
Sbjct: 302 ------TNRSTPGAVGGLPSGVTAIAAGG-AHTCALTSSGGVWCWGGN--DSGQLGDGSY 352

Query: 278 ARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             R  P  +S LP     +  GG HTC  TS G ++ WG N  G LG G+     +P  V
Sbjct: 353 TDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAV 412

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            G         + + +  ++ G  HT A++ G    W W          G +  GQLG G
Sbjct: 413 SG---------LPSGVTAIAAGNYHTCALT-GSDGVWCW----------GDNFYGQLGDG 452

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              +   P  V+ G       ++ G  HT AL  
Sbjct: 453 TTTNRSTPGAVS-GLPSGVTAIAAGNYHTCALTS 485



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 168/390 (43%), Gaps = 47/390 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+   R  P   S      + A+A G  HT  LT +  V+  G N +GQ
Sbjct: 390 WGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQ 448

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  +SGL   V  I+ G +H+ A+T  G ++ WG+N +GQLG G    
Sbjct: 449 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTN 507

Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           +  P     +P+ V  +        A G   + A+   G V  WG    G+LG G     
Sbjct: 508 RSTPGAVGGLPSGVTAI--------AAGDYHTCALMSSGGVWCWGLNNRGQLGDGSY--- 556

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 T   TP  +  L    + I AAG  H+  +  +  V+ +G  +  ++      +
Sbjct: 557 ------TDSSTPVAVGGLPSGVMAI-AAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609

Query: 278 ARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
              P  +S LP     +  G YHTC LTS G ++ WG N +G LG G+     +P  V G
Sbjct: 610 RSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSG 669

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                    + + +  ++ G +HT A++ G    W WG ++           GQLG G  
Sbjct: 670 ---------LPSGVTAIAAGDEHTCALT-GSGGVWCWGDNY----------YGQLGDGTT 709

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            +   P  V+ G       ++ G  HT AL
Sbjct: 710 TNRSTPGAVS-GLPSGVTAIAAGVYHTCAL 738



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 135/293 (46%), Gaps = 16/293 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+  +R  P          + A+A G  HT  L  +G V+  GLN+ GQ
Sbjct: 492 WGRNDSGQLGDGTTTNRSTPGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWGLNNRGQ 550

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ + GL   V+ I+ G +H+ A+T    ++ WG NS+GQLG G    
Sbjct: 551 LGDGSYTDSS-TPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A+T  G V  WG   SG+LG G          
Sbjct: 610 RSTPV--AVSGLPSGVTAIAA-GNYHTCALTSSGGVWCWGYNLSGQLGDGT--------- 657

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V   AAG  H+  +  +G V+ +GD    ++      +   P 
Sbjct: 658 TTNRSTPGAVSGLP-SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPG 716

Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            +S LP     +  G YHTC LT  G +  WG+N +G LG G      +P  V
Sbjct: 717 AVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 769



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 155/344 (45%), Gaps = 38/344 (11%)

Query: 66  SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           S+F     + A+A G  HT  LT +G V+  G N  GQLG       S  P+ +SGL   
Sbjct: 54  SSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRS-TPVAVSGLPSG 112

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V  I+ G  H+ A+T  G +  WG N  GQLG G    +  P+   V  L    T  AA 
Sbjct: 113 VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPV--AVSGLPSGVTAIAA- 169

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   + A+   G V  WG   SG+LG G  S+I          TP  +  L   +V   A
Sbjct: 170 GGAHTCALMSSGGVWCWGYNLSGQLGDG--STIY-------HITPVAVSGLP-SEVTAIA 219

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
           AG+ H+  +  +G V+ +GD    ++       +  P+ +  LP     +  GG +TC L
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCAL 279

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           TS G ++ WG N++G LG GS     +P  V G         + + +  ++ G  HT A+
Sbjct: 280 TSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGG---------LPSGVTAIAAGGAHTCAL 330

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
            S G +  W WGG+            GQLG G+  D   P  V+
Sbjct: 331 TSSGGV--WCWGGND----------SGQLGDGSYTDRSTPGAVS 362



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 132/319 (41%), Gaps = 43/319 (13%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           S  PL      + V  I+ G  H+ A+T  GE++ WG N +GQLG G    +  P+   V
Sbjct: 55  SFSPL------QGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPV--AV 106

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L    T  AA G   + A+T  G V+ WG    G+LG G           T   TP  
Sbjct: 107 SGLPSGVTAIAA-GGAHTCALTSSGGVMCWGGNYFGQLGDGSY---------TDRSTPVA 156

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +  L      IAA G  H+  +  +G V+ +G     ++      +   P  +S LP   
Sbjct: 157 VSGLPSGVTAIAAGG-AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEV 215

Query: 292 EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
             +  GY HTC LT  G ++ WG N  G LG GS     +P  V G         + + +
Sbjct: 216 TAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGG---------LPSGV 266

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
             ++ G ++T A+ S G +  W            G +  GQLG G+  +   P  V  G 
Sbjct: 267 TAIAAGGRYTCALTSSGGVWCW------------GRNDSGQLGDGSFTNRSTPGAVG-GL 313

Query: 410 NVKALQVSCGFNHTGALLE 428
                 ++ G  HT AL  
Sbjct: 314 PSGVTAIAAGGAHTCALTS 332



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 2/136 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  P   S      + A+A G  HT  LT +G V+  G N +GQ
Sbjct: 645 WGYNLSGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWGDNYYGQ 703

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  +SGL   V  I+ G +H+ A+T  G +  WG N +GQLG G+   
Sbjct: 704 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLY 762

Query: 163 KVIPIPTKVECLSGIF 178
           +  P+        G++
Sbjct: 763 RTTPVDVVTSASWGVY 778



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           S  S L     +  G +HTC LT  GE++ WG N +G LG GS     +P  V G     
Sbjct: 54  SSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSG----- 108

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
               + + +  ++ G  HT A+ S G ++ WG     G +        GQLG G+  D  
Sbjct: 109 ----LPSGVTAIAAGGAHTCALTSSGGVMCWG-----GNYF-------GQLGDGSYTDRS 152

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLE 428
            P  V+ G       ++ G  HT AL+ 
Sbjct: 153 TPVAVS-GLPSGVTAIAAGGAHTCALMS 179


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 172/368 (46%), Gaps = 52/368 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G  G G+  +R  PV           A+A G  H+L     G V+A G ND GQ
Sbjct: 370 WGSNFSGERGEGTTNNRASPVQVQGLGGG--VAVAAGFNHSLAARSDGSVWAWGSNDSGQ 427

Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   + N   S  P+++ GL   VV ++ G+ HS A+  DG ++ WG N+ GQLG G  
Sbjct: 428 LGDGTTRN---STSPVQVQGLSG-VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT 483

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +++P    V+ LSG+     A G   S+AV   G V +WG+   G+LG G  S+ L  
Sbjct: 484 TNRLVP----VQVLSGVVA--VAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRL-- 535

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  ++ L GV     AAG  HS  +  +G V+ +G  +  ++   +G  + R
Sbjct: 536 -------VPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGEL--GDGTTSNR 584

Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +  L     V  GG+H+ V+ S G ++TWGSN  G LG G+      P +VQG  
Sbjct: 585 LVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQG-- 642

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                    + +V V  G  H+ A+ S+G + TW            G++S GQLG G   
Sbjct: 643 --------LSGVVAVDAGNSHSLAVRSDGTVWTW------------GYNSYGQLGDGTTT 682

Query: 398 DYIHPTIV 405
               P  V
Sbjct: 683 RRSVPVQV 690



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 177/385 (45%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + ++A G +++L +   G V+A G N  GQ
Sbjct: 120 WGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQ 177

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   VV ++ G  HS A+  DG ++ WG NS+GQLG G K  
Sbjct: 178 LG-DGTTSNRLVPVQVPGLSG-VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKIN 235

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P+  +V  LSG+    A      S+AV   G V +WGA   G+LG G +S  L    
Sbjct: 236 RLVPV--QVPGLSGVVAVAAG--AAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRL---- 287

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L GV    +  G  HS  +  +G V+ +G  +  ++          P 
Sbjct: 288 -----VPVRVQGLSGVVA--SDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPV 340

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  G  H+  + S G ++ WGSN +G  G G+ +   SP +VQG      
Sbjct: 341 QVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQG------ 394

Query: 343 VDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                   V V+ G+ H+ AA S+G +  WG        S D     GQLG G   +   
Sbjct: 395 ----LGGGVAVAAGFNHSLAARSDGSVWAWG--------SND----SGQLGDGTTRNSTS 438

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V     V A  V+ GF+H+ AL
Sbjct: 439 PVQVQGLSGVVA--VAAGFDHSLAL 461



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 162/340 (47%), Gaps = 44/340 (12%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
           +  S   LA G +++L L   G V+ATG ND GQLG      +S  P+++ GL   VV +
Sbjct: 44  DAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHS-APVQVPGLSG-VVAV 101

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  HS A+  DG ++ WG NS+GQLG G    ++ P+  +V+ LSG+ +   A G   
Sbjct: 102 AAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPV--RVQGLSGVVS--VAAGSSY 157

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+AV   G V +WG+  SG+LG G  S+ L          P  +  L GV V + AAG  
Sbjct: 158 SLAVRSDGTVWAWGSNFSGQLGDGTTSNRL---------VPVQVPGLSGV-VSV-AAGSS 206

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSG 306
           HS  +  +G V+ +G  +  ++   +G    R  P  +  L     V  G  H+  + S 
Sbjct: 207 HSLAVLSDGSVWAWGANSSGQL--GDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSD 264

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
           G ++TWG+N  G LG G+      P RVQG           + +V    G  H+ A+ S+
Sbjct: 265 GTVWTWGANSFGQLGDGTKSDRLVPVRVQG----------LSGVVASDVGSYHSLALRSD 314

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           G +  W            GH+S GQLG  +      P  V
Sbjct: 315 GSVWAW------------GHNSSGQLGDDSSTSRSVPVQV 342



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 8/170 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G LG G+  +R  P            A+A GG H+L +   G V+  G N FG+
Sbjct: 568 WGSNSSGELGDGTTSNRLVPGRVPGLSGG--VAVAAGGFHSLVVRSDGTVWTWGSNSFGE 625

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P+++ GL   VV +  G  HS A+  DG ++ WG NS GQLG G    
Sbjct: 626 LGDGTTTSRSV-PVQVQGLSG-VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTR 683

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           + +P+  +V  LSG+     A G    + V   G V +WG    G+LG+G
Sbjct: 684 RSVPV--QVPGLSGVVAM--ATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 183/380 (48%), Gaps = 39/380 (10%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETG 90
           S L++     WGN  +G LGLG +E     V C   F+K S ++ +ACG  +T+ +T  G
Sbjct: 42  SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
            +Y+ G ND+GQLG  +  G     L I GL   V  + + G +H+ A+   G+L+ WG 
Sbjct: 102 KIYSCGNNDYGQLGHEQ--GRKRLQL-ILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGS 158

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           NS GQLGL  K       P  V+ L      Q A G + ++A+T  G++ SWG+   G+L
Sbjct: 159 NSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQL 217

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G +           E  P+LI  L GV +   A G  HS  I ++G ++ +G     +
Sbjct: 218 GLGVDIR--------CEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   +  +   P  +  L  ++     CG   +  LT  G ++T G+   G LG GS + 
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNN 329

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGH 385
              P +V        ++ + +++  +SCG +HT A+  S+G++  WG GG+         
Sbjct: 330 EILPRQV--------MELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA--------- 372

Query: 386 SSGGQLGHGNDVDYIHPTIV 405
              GQLG+ +      P +V
Sbjct: 373 ---GQLGNNSTRSTTTPQVV 389



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 136/298 (45%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K  ACG  HT+ + E G +++ G N  GQL
Sbjct: 107 GNNDYGQLG--HEQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQL 164

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    +VQI+ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 165 GLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 224

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  P  +  L+G+     A G   S+A++  G +  WG    G+LG            
Sbjct: 225 CEMK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 274

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L   KV  AA G   S  +  +G V+  G     ++     N+   P 
Sbjct: 275 TQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 334

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S     +P+ V+GP
Sbjct: 335 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVVRGP 392



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 180/395 (45%), Gaps = 60/395 (15%)

Query: 56  LESRWRPVVCSAFEKHSL----------KALACGGAHTL--FLTETGCVYATGLNDFGQL 103
           +E   RP +C    K++L          + LAC     +   L +   ++  G    G+L
Sbjct: 1   MEKDERPSLCIHIRKYTLFRRNANWNKKRRLACEPVIEVQKSLLKKEDMFCWGNTRHGEL 60

Query: 104 G---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--L 157
           G   I + I   L P  +   K  E+ QI+ G +++  IT DG++Y  G N  GQLG   
Sbjct: 61  GLGGIEDEI--ILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQ 118

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G+K  ++I        L     K+AA G   ++AV   G++ SWG+   G+LG   ++ +
Sbjct: 119 GRKRLQLIL------GLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFM 172

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN 276
                   E +PR++K L    +   A G  H+  +  NG +Y +G  +  ++ L  +  
Sbjct: 173 --------ECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 224

Query: 277 HARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
              +P LI+ L   P +  + CGGYH+  ++  G ++ WG N  G LG+      + P +
Sbjct: 225 CEMKPKLINTLAGVPIAF-IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQ 283

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           +Q   +     ++C +    +CG + +  ++ +G + T G G              GQLG
Sbjct: 284 LQTLRNA----KVCYA----ACGEEFSVFLTVDGGVFTCGAGMY------------GQLG 323

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           HG++ + I P  V         Q+SCG  HT AL+
Sbjct: 324 HGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 358


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 182/389 (46%), Gaps = 46/389 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS+  + R V         + ++A G AH+L L     V+  G N+ GQ
Sbjct: 72  WGGNGSGQLGTGSVSFQ-RVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQ 130

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G   N+     P ++ GL  +VV ++ G  HS A+  DG ++ WG N  GQLG G   +
Sbjct: 131 VGDGTNVDRP-TPQKVPGLS-DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGH--S 186

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  L+G+    A  GF+ S+AV   G V +WGA GSG+LG G     L    
Sbjct: 187 QPGPSPAQVVGLTGVVALAA--GFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRL---- 240

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  + +L+GV      AG  H+  +  +G V+ +G  +  +M   +G    RPS
Sbjct: 241 -----APTQVSQLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQM--GDGTWTDRPS 291

Query: 283 --LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
              ++ +  ++ V      + VL   G ++ WG N  G LGIG+      P RV+G    
Sbjct: 292 PVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRG---- 347

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                   ++  ++ G +H   + ++G + TW            GH + GQLGHG+    
Sbjct: 348 ------LGAVTSLAAGTQHAVVLRADGTLWTW------------GHGATGQLGHGSSERM 389

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
           + P +V    NV ++  S  F+   AL +
Sbjct: 390 LSPEVVTRLSNVASV-ASGSFHSVAALSD 417



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 172/385 (44%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G   S+  P          + ALA G   +L +   G V+A G N  GQ
Sbjct: 173 WGSNFYGQLGRG--HSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQ 230

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   L P ++S L+  V  ++ G +H+ A+  DG ++ WG NS+GQ+G G    
Sbjct: 231 LGDGTYI-QRLAPTQVSQLQG-VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD 288

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P+ V+  S    K  A     S+ +   G V +WG    G+LG G          
Sbjct: 289 R----PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIG---------- 334

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+  +P  ++      V   AAG  H+  +  +G ++ +G  A  ++          P 
Sbjct: 335 -TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPE 393

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           ++++L     V  G +H+    S G ++TWG N NG LG G+    H P RV G      
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPG------ 447

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                + +V VS    H+ A+ S+G +  WGW          G ++ GQ+G G   D   
Sbjct: 448 ----LSGVVSVSASGHHSFALRSDGTV--WGW----------GRNAQGQMGDGTTKDRAS 491

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V    +VKAL  + G +H  AL
Sbjct: 492 PARVEGLSSVKAL--ASGGSHMVAL 514



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 163/380 (42%), Gaps = 42/380 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P   S  +   + A+  G  H L L   G V+A G N  GQ
Sbjct: 223 WGANGSGQLGDGTYIQRLAPTQVSQLQ--GVSAVTAGLYHALALRSDGTVWAWGSNSSGQ 280

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G          P++++ + +    ++     S  +  DG ++ WG NS GQLG+G  A 
Sbjct: 281 MGDGTWTDRP-SPVQVTSIARAKA-VAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTAD 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +V  L G  T  AA G + +V +   G + +WG G +G+LGHG    +L    
Sbjct: 339 S--PLPVRVRGL-GAVTSLAA-GTQHAVVLRADGTLWTWGHGATGQLGHGSSERML---- 390

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                +P ++  L    V   A+G  HS     +G V+ +G     ++          P 
Sbjct: 391 -----SPEVVTRLS--NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV 443

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V   G+H+  L S G ++ WG N  G +G G+     SP RV+G      
Sbjct: 444 RVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEG------ 497

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                +S+  ++ G  H  A+ ++G + TWG+ G+            GQLG G   D   
Sbjct: 498 ----LSSVKALASGGSHMVALRTDGTVWTWGYNGA------------GQLGDGTTTDRRA 541

Query: 402 PTIVNFGENVKALQVSCGFN 421
           P  V     V ++     F+
Sbjct: 542 PVQVTGLSGVTSVAAGAYFS 561



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 179/435 (41%), Gaps = 99/435 (22%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
            WG   +G++G G+   R+RPV         L A+  + G  H+L L       + G +++
Sbjct: 1023 WGANAFGQVGDGTHFWRFRPVRVEGL----LNAVETSAGEQHSLALLGDERALSWGSHEY 1078

Query: 101  GQLGISENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQLG +E+ G SLEP+ +    S +    V +S  + H++A+  DG +  WG N++GQLG
Sbjct: 1079 GQLGDAES-GPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG 1137

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G   ++  PI   V  L  +     A     ++A+   G V +WG    G+LG G    
Sbjct: 1138 DGTTESRATPI--TVAGLGAMVAVAPAA--RHTLALRSDGTVWAWGDNTFGQLGDGS--- 1190

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------- 263
                  +T    P  +  LE  KV   AAG  HS  + E+G V+ +G             
Sbjct: 1191 ------NTRRTLPVQVVGLE--KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMD 1242

Query: 264  DRAV-------------------------DKMLFQEGNHAR------------RPSLISK 286
             RAV                         D  L+  GN++              P  + +
Sbjct: 1243 ARAVPTRMLGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVE 1302

Query: 287  LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
            L     V  GGYH+  L   G ++TWG N  G LG G++     P  V G          
Sbjct: 1303 LDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPG---------- 1352

Query: 347  CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
             T+I  V  G  HT A+      TW W          G +S GQLG G+  D + PT+V 
Sbjct: 1353 LTAIASVGAGTSHTFAVGS---ETWAW----------GRNSHGQLGTGDSSDRLEPTLVK 1399

Query: 407  FGENVKALQVSCGFN 421
                VK++     F+
Sbjct: 1400 GLHGVKSVLAGGDFS 1414



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 172/396 (43%), Gaps = 57/396 (14%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLND 99
            WG    G+LG G+L  R      S  E   L  +A G    AH L +++ G V+A G N 
Sbjct: 873  WGANGSGQLGDGTLGDR-----ASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANG 927

Query: 100  FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
             GQLG       S  P+R++GL    + +S G  +S A+  DG ++ WG N +GQLG G 
Sbjct: 928  RGQLGDGTTT-SSASPVRVAGLSA-AMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGT 985

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              A+  P P  V+ L+ +  K    G    VAV   G V  WGA   G++G G       
Sbjct: 986  NVARTTPKP--VQDLADV--KAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTH----- 1036

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            F R        L+  +E       +AG  HS  +  + R   +G     ++   E   + 
Sbjct: 1037 FWRFRPVRVEGLLNAVE------TSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSL 1090

Query: 280  RPSLISKLPYSEEVVCG------GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             P  + KLP S+ +V          H   L + G + TWG N +G LG G+ +   +P  
Sbjct: 1091 EPVGV-KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPIT 1149

Query: 334  VQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
            V G            ++V V+   +HT A+ S+G +  WG      TF        GQLG
Sbjct: 1150 VAG----------LGAMVAVAPAARHTLALRSDGTVWAWG----DNTF--------GQLG 1187

Query: 393  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             G++     P  V   E V A  ++ G  H+ A+ E
Sbjct: 1188 DGSNTRRTLPVQVVGLEKVTA--IAAGSYHSLAVRE 1221



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 164/389 (42%), Gaps = 43/389 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  D G+LG G+  +R  P          +KA+  G  H + +   G V+  G N FGQ
Sbjct: 973  WGANDSGQLGDGTNVARTTPKPVQDLAD--VKAVTAGAHHVVAVRHDGTVWGWGANAFGQ 1030

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            +G   +  +   P+R+ GL    V+ S G  HS A+  D     WG +  GQLG  +   
Sbjct: 1031 VGDGTHF-WRFRPVRVEGLLN-AVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGP 1088

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             + P+  K+     +    +   + Q + A+   G V +WG    G+LG G         
Sbjct: 1089 SLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGT-------- 1140

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             + S  TP  +  L G  V +A A   H+  +  +G V+ +GD    ++   +G++ RR 
Sbjct: 1141 -TESRATPITVAGL-GAMVAVAPAA-RHTLALRSDGTVWAWGDNTFGQL--GDGSNTRRT 1195

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P  +  L     +  G YH+  +   G ++ WG N  G LG G++D    P R+ G   
Sbjct: 1196 LPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLG--- 1252

Query: 340  ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                       V V+ G  H+  +              GT    G++S GQLG G   + 
Sbjct: 1253 -------LDGAVAVAGGEYHSLMLR-----------FDGTLWATGNNSHGQLGEGTFTNR 1294

Query: 400  IHPTIVNFGENVKALQVSCGFNHTGALLE 428
            + P  V   + V+   V  G  H+ AL E
Sbjct: 1295 LSPFQVVELDQVRT--VRAGGYHSVALRE 1321



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 132/281 (46%), Gaps = 21/281 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  +G+LG GS   R  PV     EK  + A+A G  H+L + E G V+A G N FGQ
Sbjct: 1178 WGDNTFGQLGDGSNTRRTLPVQVVGLEK--VTAIAAGSYHSLAVREDGTVWAWGYNVFGQ 1235

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       ++ P R+ GL   V  ++ G +HS  +  DG L+  G NS+GQLG G    
Sbjct: 1236 LGDGTMDARAV-PTRMLGLDGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++ P   +V  L  + T +A  G   SVA+   G V +WG  G G+LG G          
Sbjct: 1294 RLSPF--QVVELDQVRTVRA--GGYHSVALREDGTVWTWGHNGQGQLGDGTV-------- 1341

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             T+   P  +  L      IA+ G   S         + +G  +  ++   + +    P+
Sbjct: 1342 -TTRRVPAPVPGL----TAIASVGAGTSHTFAVGSETWAWGRNSHGQLGTGDSSDRLEPT 1396

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            L+  L   + V+ GG  +    + G   +WG+N +G LGIG
Sbjct: 1397 LVKGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIG 1437



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 138/343 (40%), Gaps = 67/343 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G++G G+   R  PV  ++  +   KA+A   A +L L + G V+A GLN  GQ
Sbjct: 273 WGSNSSGQMGDGTWTDRPSPVQVTSIAR--AKAVAAQDAGSLVLLDDGGVFAWGLNSQGQ 330

Query: 103 LGISENIGYSLEPLRISGLK---------------------------------------- 122
           LGI       L P+R+ GL                                         
Sbjct: 331 LGIGTTADSPL-PVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERM 389

Query: 123 ---------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
                      V  +++G  HS A   DG ++ WG+N+NGQLG G    + +P+  +V  
Sbjct: 390 LSPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV--RVPG 447

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           LSG+ +  A+     S A+   G V  WG    G++G G          +    +P  ++
Sbjct: 448 LSGVVSVSAS--GHHSFALRSDGTVWGWGRNAQGQMGDGT---------TKDRASPARVE 496

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
            L    VK  A+G  H   +  +G V+ +G     ++        R P  ++ L     V
Sbjct: 497 GLS--SVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV 554

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             G Y +  L + G ++ WG    G LG G+     SP +V G
Sbjct: 555 AAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTG 597



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 175/391 (44%), Gaps = 54/391 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G++G GS   R+R V    +    + ++  G  H++ L + G + A G N +GQ
Sbjct: 623 WGDNTEGQMGDGSWSDRFRAV--QVYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQ 680

Query: 103 LG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G   ++  +     P  +SG+K     +   Y H  A+  DG L  WG N  GQLGLG 
Sbjct: 681 FGDGGVTPRVVAGAVP-GLSGIKL----LGASYLHVLAVREDGMLLTWGYNRFGQLGLG- 734

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            AA    +P +V  L     ++ + G   S+ V   G VL+WG   SG+LG G       
Sbjct: 735 -AAGWSSLPVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGS------ 785

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T   +P L + L     + A+AG  HS  +  +G V+ +G  +  ++   +G    
Sbjct: 786 ---TTHRASPVLARNLP--CARAASAGRQHSLVLACDGTVWSWGGNSQGQL--GDGGVTS 838

Query: 280 R--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           R  P+ +  L     V+ GG  + VL + G ++TWG+N +G LG G++    SP  V+G 
Sbjct: 839 RAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKG- 897

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                +  I T ++    G  H   +S +G +  WG  G             GQLG G  
Sbjct: 898 -----LAGIATGVM----GEAHALVVSQDGTVWAWGANGR------------GQLGDGTT 936

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                P  V       A+ VS G  ++ A+L
Sbjct: 937 TSSASP--VRVAGLSAAMNVSVGQAYSLAVL 965



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 48/364 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G  G+LG G+   R  PV  +   +  +  LA G AH L + + G V+A G N  GQ
Sbjct: 573 WGDGFEGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQ 630

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G   +       +++ GL   V  +  G +HS A+  DG L  WG N+ GQ G G    
Sbjct: 631 MG-DGSWSDRFRAVQVYGLTG-VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTP 688

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSILGF 220
           +V+     V  LSGI  K     +   +AV   G +L+WG    G+LG G    SS+   
Sbjct: 689 RVVA--GAVPGLSGI--KLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--- 741

Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   P  ++ L +G ++   +AG  HS  +  +G V  +G     ++      H  
Sbjct: 742 --------PVQVRGLGQGRRL---SAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRA 790

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P L   LP +     G  H+ VL   G +++WG N  G LG G +     P +V+G + 
Sbjct: 791 SPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLW- 849

Query: 340 ESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +V V  G   +  + ++G + TWG  GS            GQLG G   D
Sbjct: 850 ---------GVVAVLAGGDSSMVLRADGTVWTWGANGS------------GQLGDGTLGD 888

Query: 399 YIHP 402
              P
Sbjct: 889 RASP 892



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 120/265 (45%), Gaps = 42/265 (15%)

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P   + + L+   +K AA G + S+ VT  G V +WG  GSG+LG G  S    F R  +
Sbjct: 38  PPAARSQALASATSKVAA-GAQHSLYVTQAGTVWAWGGNGSGQLGTGSVS----FQRVVA 92

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
           +  P L        V   AAG  HS  +  +  V+ +G     ++   +G +  RP+   
Sbjct: 93  QQVPGL------TDVTSIAAGDAHSLALRADRTVWTWGGNNAGQV--GDGTNVDRPT-PQ 143

Query: 286 KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           K+P   +VV    G +H+  L + G ++ WGSN  G LG G      SP +V G      
Sbjct: 144 KVPGLSDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVG------ 197

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                T +V ++ G+  + A+ S+G +  WG  GS            GQLG G  +  + 
Sbjct: 198 ----LTGVVALAAGFDFSLAVRSDGTVWAWGANGS------------GQLGDGTYIQRLA 241

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           PT V+  + V A  V+ G  H  AL
Sbjct: 242 PTQVSQLQGVSA--VTAGLYHALAL 264



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDFG 101
            WG+   G+LG G++ +R  P         ++ ++  G +HT  + +ET   +A G N  G
Sbjct: 1328 WGHNGQGQLGDGTVTTRRVPAPVPGLT--AIASVGAGTSHTFAVGSET---WAWGRNSHG 1382

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QLG  ++    LEP  + GL   V  +  G   S A   DG    WG N +G LG+G   
Sbjct: 1383 QLGTGDS-SDRLEPTLVKGLHG-VKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPG 1440

Query: 162  AKVIP 166
             + +P
Sbjct: 1441 QRTVP 1445


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 181/374 (48%), Gaps = 47/374 (12%)

Query: 43  WGNGDYGRLGLGSLESRWR-----PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           WG   Y  LG   + S  R     P VC      S+K +ACGG H++FL E G VY  G+
Sbjct: 4   WG---YWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N  GQLG  E  G   +P +I  L  + +V ++ G  HS A++  G+L+ WG  S+GQLG
Sbjct: 61  NSKGQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 117

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           L       + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E  
Sbjct: 118 L-MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                   S+ +P+ ++ LEG+ +   AAG  HS  +  +G V+ +G     ++   +  
Sbjct: 177 --------SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  + KL  +++VV   CG  HT VLT  G ++T+G+   G LG GS++   +P R
Sbjct: 229 DRESPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRR 287

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
           V        ++ + + +  ++CG +HT A   S G I  +G G              GQL
Sbjct: 288 V--------LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR------------GQL 327

Query: 392 GHGNDVDYIHPTIV 405
           G G+  +   P+ V
Sbjct: 328 GTGHTCNVKCPSPV 341



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G NS GQLG 
Sbjct: 9   LGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG +HTA +++ G + T+G G            S GQ
Sbjct: 234 CHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGHG+  D ++P  V      +  Q++CG  HT A +
Sbjct: 274 LGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 177/364 (48%), Gaps = 43/364 (11%)

Query: 43  WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           WG G  G LGL        +     +P     F   +++ +ACG  HTL L   G VY+ 
Sbjct: 56  WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 115

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G NDFGQLG   ++   LE  +++ L   E+  ++ G  HS A++  G+++ WG N NGQ
Sbjct: 116 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 172

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +    +  P  ++ L+ +   Q A G    +A+   G++ SWG   SG+LG G++
Sbjct: 173 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 231

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S       + +E  PR +  L GV + + A G +HS  +  +G V+++G  +  ++   +
Sbjct: 232 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 284

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 P+++  L     + V CG  HT  LT+ G ++T+G+   G LG G       P 
Sbjct: 285 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 344

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWGWGGSHGTFSEDGHSSGGQ 390
           RV        V+ + T+I  +SCG  HT A +   G++  +G G S            GQ
Sbjct: 345 RV--------VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS------------GQ 384

Query: 391 LGHG 394
           LG+G
Sbjct: 385 LGNG 388



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 15/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D+G+LG      +   V  +A   H ++A+ACG AH+L L++ G V++ G N  GQL
Sbjct: 116 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 173

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G        L P  I  L    +VQI+ G  H  A+  +GEL+ WG N++GQLGLG+ + 
Sbjct: 174 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 233

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V  L G+     A G   SV +T  G V  WG    G+LG   +   L    
Sbjct: 234 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 290

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P ++K L   ++K    G  H+A +  +G V+ FG     ++      +   P 
Sbjct: 291 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 344

Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT       G LY +G   +G LG G+++    P  V G
Sbjct: 345 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 401



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 127/294 (43%), Gaps = 42/294 (14%)

Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           LY WG   NG+LGL     G      +  P +V        ++ A G + ++ +   G V
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            S GA   G+LG  +       +R   +     +  L   +++  A G  HS  + + G+
Sbjct: 113 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 161

Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
           V+ +G +R        E     RP +I KL   +  ++ CG  H   L + GEL++WG N
Sbjct: 162 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 221

Query: 316 ENGCLGIG--SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            +G LG+G  S      P RV           +   + LV+CG  H+  ++  G +  WG
Sbjct: 222 ASGQLGLGRDSTGNERLPRRVS--------HLVGVPLALVACGAMHSVGLTPSGTVFVWG 273

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                        +S GQLG  +  D +HPT++    + +   V CG NHT AL
Sbjct: 274 ------------RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGL     R  P V        +K + CG  HT  LT  G V+  G   +G
Sbjct: 271 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 330

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
           QLG    +  ++    +  +   + Q+S G  H+ A     G LY++G   +GQLG G  
Sbjct: 331 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 390

Query: 161 AAKVIPI 167
            +  +P+
Sbjct: 391 ESSALPV 397


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 178/389 (45%), Gaps = 47/389 (12%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   E    P      E   +  +A G  H+L L + G V+A G N +G
Sbjct: 133 WGYNSYGQLGLGEAGEIERIPKKIEGLE--DVIKVAAGSRHSLALKKDGTVWAWGYNYYG 190

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   NI  +  P+++ GL   V  I  G   S A+  DG ++ WG N  GQ+G G   
Sbjct: 191 QLGDESNIRRN-TPVQVKGLTG-VKDIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGI 248

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +P+ T    +S I   Q + G E  +A+     V  WGAG  G+LG+G  +S L   
Sbjct: 249 NSNVPLQTV--GVSNI--TQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIP 304

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              S +T          +VK   AG + SA I E+G ++I+GD     ++    N    P
Sbjct: 305 EKLSSFT----------EVKSVKAGTMVSAAIKEDGTLWIWGDNTY-GIMGNSRNINSSP 353

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
                +   + V    Y    L + G ++TWG N NG LG+G+      P  V G     
Sbjct: 354 VQRKDISGIKAVELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSG----- 408

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                   + ++SCG  H A I S+G + TW            G++  GQLG+GN VDYI
Sbjct: 409 -----TGDVEVISCGKTHMAIIKSDGTLWTW------------GYNIYGQLGNGN-VDYI 450

Query: 401 -HPTIVNFGENVKALQVSCGFNHTGALLE 428
             P  +N   N+   ++SCG  H  A+ E
Sbjct: 451 TEPVTINGISNIS--KISCGGKHVLAIDE 477



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 50/395 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+++    PV  +     ++  ++CGG H L + E   ++A G ND+ Q
Sbjct: 434 WGYNIYGQLGNGNVDYITEPVTINGIS--NISKISCGGKHVLAIDENKTLWAWGNNDYLQ 491

Query: 103 LGISENIGYSLE--------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L   +++G S E        P  +   +K+V  I   ++ +  +  D E++++    N  
Sbjct: 492 L--IDDVGLSAESGSNDYCIPFAVKS-EKDVKDIVAAFNRTLVVYEDEEVWIYAA-KNTV 547

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            G      + + +P K+E L G+     ++G    +A+   G V S G    G+LG G +
Sbjct: 548 AG----DEQSVYLPYKIEGLEGV--TDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQ 601

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           +       S SE T  L K      +   AAG  HS  +  +G V+ +G     ++    
Sbjct: 602 T----HHNSYSE-TFNLTKAKGLTNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGN 656

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              +  P     L     +  G  +   L   G ++ WG N  G LG GS    + P +V
Sbjct: 657 DTFSLEPMQAEGLENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVPVQV 716

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
            G            +IV +  G   + AI+ +G +  W W          G ++ GQLG 
Sbjct: 717 DG----------LENIVKIIAGRDSSFAITKDGDV--WAW----------GKNNCGQLGD 754

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G   + + P  ++  +  K+  +  G + T  L+ 
Sbjct: 755 GTTQNRLTPVKIDAFKGCKS--IVSGMDFTMVLMN 787



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 179/441 (40%), Gaps = 92/441 (20%)

Query: 43  WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG GD G+LG G+  S  R P   S+F +  +K++  G   +  + E G ++  G N +G
Sbjct: 284 WGAGDKGQLGNGTAASFLRIPEKLSSFTE--VKSVKAGTMVSAAIKEDGTLWIWGDNTYG 341

Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +G S NI  S ++   ISG+K     +    + ++A+  DG ++ WGKN NG LGLG  
Sbjct: 342 IMGNSRNINSSPVQRKDISGIK----AVELNQYCAAALKNDGTVWTWGKNINGILGLGTA 397

Query: 161 AAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-- 217
               IP       +SG    +  + G      +   G + +WG    G+LG+G    I  
Sbjct: 398 LDSQIP-----SVVSGTGDVEVISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITE 452

Query: 218 ---------------------------------------------LGFLRSTSEY-TPRL 231
                                                        L     +++Y  P  
Sbjct: 453 PVTINGISNISKISCGGKHVLAIDENKTLWAWGNNDYLQLIDDVGLSAESGSNDYCIPFA 512

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K  + VK  +AA  F  +  + E+  V+I+   A    +  +      P  I  L    
Sbjct: 513 VKSEKDVKDIVAA--FNRTLVVYEDEEVWIY---AAKNTVAGDEQSVYLPYKIEGLEGVT 567

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES---PVDQICT 348
           +V  G  H   L   G +Y+ G++  G LG GS       +     +SE+      +  T
Sbjct: 568 DVSVGKNHILALKDDGYVYSAGNSYWGQLGDGS-------QTHHNSYSETFNLTKAKGLT 620

Query: 349 SIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
           +IV V+ G +H+ A+ ++G + TWG             +  G+L HGND   + P     
Sbjct: 621 NIVAVAAGSEHSVALKNDGTVWTWG------------SNQFGELAHGNDTFSLEPMQAEG 668

Query: 408 GENVKALQVSCGFNHTGALLE 428
            EN+ A  +S G N+  AL E
Sbjct: 669 LENICA--ISAGNNYNLALKE 687



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 118/250 (47%), Gaps = 26/250 (10%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           VQ++ G +H+ A+  DG ++ WG NS GQLGLG +A ++  IP K+E L  +   + A G
Sbjct: 112 VQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG-EAGEIERIPKKIEGLEDVI--KVAAG 168

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S+A+   G V +WG    G+L  G ES+I          TP  +K L GVK  I A 
Sbjct: 169 SRHSLALKKDGTVWAWGYNYYGQL--GDESNI-------RRNTPVQVKGLTGVK-DIDAG 218

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
            F  S  + ++G V+ +G     ++    G ++  P     +    ++  G  H   L  
Sbjct: 219 DFF-SVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGDEHVLALDK 277

Query: 306 GGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
              ++ WG+ + G LG G+    L  PE++   F+E         +  V  G   +AAI 
Sbjct: 278 DKNVWGWGAGDKGQLGNGTAASFLRIPEKLS-SFTE---------VKSVKAGTMVSAAIK 327

Query: 365 EGKILTWGWG 374
           E   L W WG
Sbjct: 328 EDGTL-WIWG 336



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 17/191 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G L  G+      P+     E  ++ A++ G  + L L E G V+A G N +GQ
Sbjct: 644 WGSNQFGELAHGNDTFSLEPMQAEGLE--NICAISAGNNYNLALKEDGTVWAWGDNTYGQ 701

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+++ GL+  +V+I  G   S AIT DG+++ WGKN+ GQLG G    
Sbjct: 702 LGNGSTYKTNV-PVQVDGLEN-IVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQN 759

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  K++   G   K    G + ++ +   G V+  G+  SG +        LGF  
Sbjct: 760 RLTPV--KIDAFKG--CKSIVSGMDFTMVLMNDGTVIGVGSNVSGVM-------TLGF-- 806

Query: 223 STSEYTPRLIK 233
           S   + P  +K
Sbjct: 807 SDRSFIPIEVK 817



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GS      PV     E  ++  +  G   +  +T+ G V+A G N+ GQ
Sbjct: 694 WGDNTYGQLGNGSTYKTNVPVQVDGLE--NIVKIIAGRDSSFAITKDGDVWAWGKNNCGQ 751

Query: 103 LG--ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG   ++N    L P++I   K  K +V   +G   +  +  DG +   G N +G + LG
Sbjct: 752 LGDGTTQN---RLTPVKIDAFKGCKSIV---SGMDFTMVLMNDGTVIGVGSNVSGVMTLG 805

Query: 159 KKAAKVIPIPTKVE 172
                 IPI  K++
Sbjct: 806 FSDRSFIPIEVKIK 819


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 177/364 (48%), Gaps = 43/364 (11%)

Query: 43  WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           WG G  G LGL        +     +P     F   +++ +ACG  HTL L   G VY+ 
Sbjct: 50  WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 109

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G NDFGQLG   ++   LE  +++ L   E+  ++ G  HS A++  G+++ WG N NGQ
Sbjct: 110 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 166

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +    +  P  ++ L+ +   Q A G    +A+   G++ SWG   SG+LG G++
Sbjct: 167 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 225

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S       + +E  PR +  L GV + + A G +HS  +  +G V+++G  +  ++   +
Sbjct: 226 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 278

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 P+++  L     + V CG  HT  LT+ G ++T+G+   G LG G       P 
Sbjct: 279 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 338

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAIS--EGKILTWGWGGSHGTFSEDGHSSGGQ 390
           RV        V+ + T+I  +SCG  HT A +   G++  +G G S            GQ
Sbjct: 339 RV--------VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS------------GQ 378

Query: 391 LGHG 394
           LG+G
Sbjct: 379 LGNG 382



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 15/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D+G+LG      +   V  +A   H ++A+ACG AH+L L++ G V++ G N  GQL
Sbjct: 110 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 167

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G        L P  I  L    +VQI+ G  H  A+  +GEL+ WG N++GQLGLG+ + 
Sbjct: 168 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 227

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V  L G+     A G   SV +T  G V  WG    G+LG   +   L    
Sbjct: 228 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 284

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P ++K L   ++K    G  H+A +  +G V+ FG     ++      +   P 
Sbjct: 285 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 338

Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT       G LY +G   +G LG G+++    P  V G
Sbjct: 339 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 395



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 127/294 (43%), Gaps = 42/294 (14%)

Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           LY WG   NG+LGL     G      +  P +V        ++ A G + ++ +   G V
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            S GA   G+LG  +       +R   +     +  L   +++  A G  HS  + + G+
Sbjct: 107 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 155

Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
           V+ +G +R        E     RP +I KL   +  ++ CG  H   L + GEL++WG N
Sbjct: 156 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 215

Query: 316 ENGCLGIG--SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            +G LG+G  S      P RV           +   + LV+CG  H+  ++  G +  WG
Sbjct: 216 ASGQLGLGRDSTGNERLPRRVS--------HLVGVPLALVACGAMHSVGLTPSGTVFVWG 267

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                        +S GQLG  +  D +HPT++    + +   V CG NHT AL
Sbjct: 268 ------------RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGL     R  P V        +K + CG  HT  LT  G V+  G   +G
Sbjct: 265 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 324

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
           QLG    +  ++    +  +   + Q+S G  H+ A     G LY++G   +GQLG G  
Sbjct: 325 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 384

Query: 161 AAKVIPI 167
            +  +P+
Sbjct: 385 ESSALPV 391


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 173/348 (49%), Gaps = 33/348 (9%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG+   G+LG+ ++  ++ R V C   ++    +L   ACG  H+L L   G V++ G N
Sbjct: 5   WGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNN 64

Query: 99  DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             GQLG      +   P +I  L+ +++V +S G  HS AI  +G ++ WG  S+GQLG+
Sbjct: 65  SCGQLGRKRCQKHG-RPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGI 123

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K+  IP K++ LS     Q + G   S+A+   G+V SWG    G+LG G+    
Sbjct: 124 -REFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVP- 181

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF----Q 273
                  S+ +P+ +K L+G+ +   AAG  HS  +  +G  Y +G     ++      +
Sbjct: 182 -------SQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKE 234

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                 +P  I +L   +   + CG  HT VLT  G+++T+GSN++G LG   I  +  P
Sbjct: 235 SAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGP 294

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS--EGKILTWGWGGSH 377
           + V    S S           ++CG  HT A S   G+++++G G   
Sbjct: 295 QVVDSAVSFSQ----------IACGSYHTLAYSCTTGQVISFGCGSQR 332



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 133/342 (38%), Gaps = 90/342 (26%)

Query: 145 YMWGKNSNGQLGL-GKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKV 198
           Y WG NS+GQLG+     AK       V C  G         QAA G   S+ +   G V
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKA----RAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTV 58

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            S G    G+LG           R      P  I+ LE   +   + G  HS  I + GR
Sbjct: 59  WSCGNNSCGQLGRK---------RCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGR 109

Query: 259 VYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
           V+ +G  +  ++  +E    +  P  I +L   +  +V CG YH+  L   G +++WG N
Sbjct: 110 VFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKN 169

Query: 316 ENGCLGIG-------------SIDVL---------------------------------- 328
            +G LG+G             S+D +                                  
Sbjct: 170 NHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLAL 229

Query: 329 ----HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 383
                S E++  PFS   + ++   +  +SCG +HTA ++ +GK+ T+G        S D
Sbjct: 230 SGKKESAEQISKPFSIGELKRL--QVTYISCGDEHTAVLTQDGKVFTFG--------SND 279

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
               G QL  G     +  + V+F       Q++CG  HT A
Sbjct: 280 SGQLGRQLISGMKGPQVVDSAVSFS------QIACGSYHTLA 315


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 184/389 (47%), Gaps = 49/389 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS +S   PV         + A++ G  H+L L   G V+A G N  GQ
Sbjct: 20  WGGNALGQLGDGSSDSHSEPVRVRGLS--GVVAVSAGEGHSLALHRDGTVWAWGDNALGQ 77

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +  +S EP+R+ GL   VV +S G +HS A+  DG ++ WG N++ QLG G   A
Sbjct: 78  LGDGTSDSHS-EPVRVPGLSG-VVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGA 134

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   +P ++E LS +     A G   S+AV   G V +WG   +G+LG G    IL    
Sbjct: 135 QSYSVPWRLEDLSEVVA--VAAGGNHSLAVRADGTVWAWGDNFAGQLGDGN---IL---- 185

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----H 277
            T+ + P+ ++ L GV    A+AG+ HS     +G V+ +G+    ++    GN     +
Sbjct: 186 -TTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAWGNNTSGQL----GNGISVGY 238

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +  L     V  GG ++  L S G L+ WGSN++G  G GS   L S  RV   
Sbjct: 239 GALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRV--- 295

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                  +  + +V ++ G  H+ A+     L W WG ++           GQLG G   
Sbjct: 296 -------RWLSGVVAMAAGSAHSLAVRSDGTL-WAWGANY----------YGQLGDGTRK 337

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           D+  P  V     V A  V+ G  H+ AL
Sbjct: 338 DHDTPKRVQGLSRVVA--VAAGDGHSIAL 364



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 174/383 (45%), Gaps = 44/383 (11%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG G+ L +RW P          + A + G AH++     G V+A G N  G
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPKQVQGLS--GVVAASAGWAHSMVALSDGSVWAWGNNTSG 228

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   ++GY   P ++ GL+  V+ ++ G  +S A+  DG L+ WG N +GQ G G   
Sbjct: 229 QLGNGISVGYGALPEQVQGLRG-VMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTV 287

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +    +V  LSG+    A  G   S+AV   G + +WGA   G+LG G         
Sbjct: 288 --YLSSSVRVRWLSGVVAMAA--GSAHSLAVRSDGTLWAWGANYYGQLGDGTR------- 336

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 TP+ ++ L   +V   AAG  HS  +  +G V+ +G     ++     N +  P
Sbjct: 337 --KDHDTPKRVQGLS--RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP 392

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             + +L     V  G  H+  + S G ++ WG N  G LG GS+     P RVQG     
Sbjct: 393 LHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQG----- 447

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                 + +  VS G  H+ A  ++G +  W WGG          +S GQLG G   + +
Sbjct: 448 -----LSGVAAVSAGLNHSLARGTDGGV--WAWGG----------NSFGQLGEGTTSNAL 490

Query: 401 HPTIVNFGENVKALQVSCGFNHT 423
            P  V     V+   +S GFNH+
Sbjct: 491 VPVRVRGLSGVE--TISAGFNHS 511



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 183/390 (46%), Gaps = 47/390 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+ +S   PV         + A++ G  H+L L   G V+A G N+  Q
Sbjct: 70  WGDNALGQLGDGTSDSHSEPVRVPGLS--GVVAVSAGDNHSLALRSDGSVWAWGDNNSDQ 127

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG +        P R+  L  EVV ++ G +HS A+  DG ++ WG N  GQLG G    
Sbjct: 128 LGGAPGAQSYSVPWRLEDLS-EVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILT 186

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V+ LSG+    A  G+  S+     G V +WG   SG+LG+G     +G+  
Sbjct: 187 TRW-LPKQVQGLSGVVAASA--GWAHSMVALSDGSVWAWGNNTSGQLGNGIS---VGY-- 238

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L GV     AAG L+S  +  +G ++ +G    D     +G+     S
Sbjct: 239 ---GALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSN--DHGQRGDGSTVYLSS 291

Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + ++ +   VV    G  H+  + S G L+ WG+N  G LG G+     +P+RVQG   
Sbjct: 292 SV-RVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQG--- 347

Query: 340 ESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                   + +V V+ G  H+ A+ ++G + TWG       ++ D     GQL HG+  D
Sbjct: 348 -------LSRVVAVAAGDGHSIALCADGTVWTWG-------YNHD-----GQLAHGSTND 388

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              P  ++  E    + V+ G  H+ A+L 
Sbjct: 389 --SPVPLHVRELSGVVAVAAGALHSLAVLS 416



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 44/338 (13%)

Query: 43  WGNGDYGRLGLGS-------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           WG+ D+G+ G GS       +  RW   V          A+A G AH+L +   G ++A 
Sbjct: 273 WGSNDHGQRGDGSTVYLSSSVRVRWLSGVV---------AMAAGSAHSLAVRSDGTLWAW 323

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G N +GQLG      +   P R+ GL + VV ++ G  HS A+  DG ++ WG N +GQL
Sbjct: 324 GANYYGQLGDGTRKDHD-TPKRVQGLSR-VVAVAAGDGHSIALCADGTVWTWGYNHDGQL 381

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
             G       P+P  V  LSG+     A G   S+AV   G V +WG    G+LG G   
Sbjct: 382 AHGSTNDS--PVPLHVRELSGVVA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGS-- 435

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                L S++E  P  ++ L GV     +AG  HS     +G V+ +G  +  ++     
Sbjct: 436 -----LSSSAE--PVRVQGLSGVAA--VSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTT 486

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           ++A  P  +  L   E +  G  H+    S G L+ WG N  G LG G+      P RVQ
Sbjct: 487 SNALVPVRVRGLSGVETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQ 546

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
           G           + +  V  G  H+ A+ ++G +  WG
Sbjct: 547 G----------LSGVAAVFAGLNHSLAVRTDGSVWAWG 574



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 161/353 (45%), Gaps = 42/353 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+ +    P       +  + A+A G  H++ L   G V+  G N  GQ
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLSR--VVAVAAGDGHSIALCADGTVWTWGYNHDGQ 380

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           L    +   S  PL +  L   VV ++ G  HS A+  DG ++ WG N  GQLG G  ++
Sbjct: 381 L-AHGSTNDSPVPLHVRELSG-VVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS 438

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +V+ LSG+    A  G   S+A    G V +WG    G+LG G  S+ L    
Sbjct: 439 SAEPV--RVQGLSGVAAVSA--GLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNAL---- 490

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L GV+    +AGF HS     +G ++ +G     ++     +++  P 
Sbjct: 491 -----VPVRVRGLSGVET--ISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPV 543

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  G  H+  + + G ++ WG N  G LG G+ +   +P RVQG      
Sbjct: 544 RVQGLSGVAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQG------ 597

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                + +  V+ G  H+ ++ S+G +  W WG +H       H   GQLGHG
Sbjct: 598 ----LSGMETVAAGSLHSLSVGSDGSM--WSWGNNH-------H---GQLGHG 634



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +   PV         + A+  G  H+L +   G V+A G+N FGQ
Sbjct: 523 WGGNYTGQLGDGTTSNSSVPVRVQGLS--GVAAVFAGLNHSLAVRTDGSVWAWGINSFGQ 580

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+R+ GL   +  ++ G  HS ++  DG ++ WG N +GQLG G    
Sbjct: 581 LG-EGTTNTSFAPVRVQGLSG-METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHGLPGR 638

Query: 163 KVIPI 167
              P+
Sbjct: 639 SPTPV 643



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 35/215 (16%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G + S+A+   G V +WG    G+LG G          S S   P  ++ L GV    
Sbjct: 2   AAGTDHSLALRHDGTVWAWGGNALGQLGDGS---------SDSHSEPVRVRGLSGVVAVS 52

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
           A  G  HS  +  +G V+ +GD A+ ++     +    P  +  L     V  G  H+  
Sbjct: 53  AGEG--HSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPGLSGVVAVSAGDNHSLA 110

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
           L S G ++ WG N +  LG       +S P R++   SE         +V V+ G  H+ 
Sbjct: 111 LRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLE-DLSE---------VVAVAAGGNHSL 160

Query: 362 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           A+ ++G +  WG       F+       GQLG GN
Sbjct: 161 AVRADGTVWAWG-----DNFA-------GQLGDGN 183


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 179/374 (47%), Gaps = 55/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H + +T+ G  ++ G    G+LG  +  NI    +P  I  L    ++ ++
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 353

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+T+ G+LY WGK   G LG G + +  +P       L GI     A G   +
Sbjct: 354 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 412

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG + S+         + PR +  L+G++   AA G  H
Sbjct: 413 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 463

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     GN   +  P+ ++ L  P   +V
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 521

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D   +P RV+G   +S V++I       
Sbjct: 522 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEI------- 573

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H A + S  ++ TWG G            S G+LGHG+  D   PT+V   ++ +
Sbjct: 574 ACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQ 621

Query: 413 ALQVSCGFNHTGAL 426
              ++CG N T A+
Sbjct: 622 VKSIACGTNFTAAV 635



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +  +P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 319 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 378

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G K
Sbjct: 379 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 437

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G  GR
Sbjct: 438 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 495

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 496 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 542

Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  Q GN HA  + P+ +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG 
Sbjct: 543 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 602

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G +D  +SP  V     ES  D+   SI   +CG   TAA+
Sbjct: 603 GDVDDRNSPTLV-----ESLKDKQVKSI---ACGTNFTAAV 635



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 120/279 (43%), Gaps = 51/279 (18%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +V VT  G+  SWG    GRLGHG +S+I         
Sbjct: 285 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 335

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
             P+LI  L    +++ A G  HS  +  +G +Y +G    D  +   GN       +R 
Sbjct: 336 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 393

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + + +  +   + CG YHT V+TS G+L+T+G    G LG G    +  P          
Sbjct: 394 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-------- 445

Query: 342 PVDQIC-TSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSS 387
            VD +     V  +CG  HTAA+ E             GK+ TWG G             
Sbjct: 446 -VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK----------- 493

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LGHGN    + PT V         QV+CG + T AL
Sbjct: 494 -GRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVAL 531



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 24/206 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ ++P LI  L 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG +H+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 346 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 404

Query: 346 ICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
           I       +CG  HTA + S G++ T+G     GTF        G LGHG+      P  
Sbjct: 405 I-------ACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDKKSVFIPRE 445

Query: 405 VNFGENVKALQVSCGFNHTGALLEYV 430
           V+  + ++ ++ +CG  HT A++E +
Sbjct: 446 VDSLKGLRTVRAACGVWHTAAVVEVM 471


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 19/298 (6%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P  C  F    +  + CG  HT+FL + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P  +  L  ++ V +S G  H+ A+   G+++ WG  SNGQLGL  
Sbjct: 64  GQLGHEKS---RKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNN 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + + +P  ++CLS +   Q A G+  S A++ GG+V SWG    G+LG G   S + 
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   TP++I+ L+G+     +AG  HS  I  +G V+ +G     ++   +     
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRW 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            P+L+  L  S+ V+   CG  HT  LT    ++T+G+   G LG    +   +P +V
Sbjct: 232 FPALLKSL-RSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKV 288



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 146/330 (44%), Gaps = 46/330 (13%)

Query: 100 FGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           +GQLG   I E I   +EP +      K V  +  G  H+  +  DG +Y  G N  GQL
Sbjct: 9   YGQLGLGGIDEEI--VVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQL 66

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  K   K    P  V  L        + G   ++A+   G+V SWG G +G+LG     
Sbjct: 67  GHEKSRKK----PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFE 122

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
             +          PR IK L  V++   A G+ HS  + + G+V+ +G     ++ L   
Sbjct: 123 ECVR--------VPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMH 174

Query: 275 GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           G+    P +I  L   P+++ +  GG H+  +T  G ++ WG N+ G LG+        P
Sbjct: 175 GSSISTPQIIQSLQGIPFAQ-LSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQ 390
             ++   S+         ++ VSCG  HTAA+++ + + T+G GG             GQ
Sbjct: 234 ALLKSLRSQR--------VIFVSCGEDHTAALTKLRGVFTFGAGGY------------GQ 273

Query: 391 LGHGNDVDYIHP-TIVNFGENVKALQVSCG 419
           LGH      I+P  +     NV   Q+SCG
Sbjct: 274 LGHNCTNHEINPRKVFELMGNV-VTQISCG 302



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 48/291 (16%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K E   G        G + +V +   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGS 112

Query: 267 VDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             ++    F+E    R P  I  L   +  +V CG +H+  L+ GG++++WG N+ G LG
Sbjct: 113 NGQLGLNNFEEC--VRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLG 170

Query: 322 IG----SIDVLHSPERVQG-PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGG 375
           +G    SI      + +QG PF++            +S G  H+ AI+  G +  WG   
Sbjct: 171 LGMHGSSISTPQIIQSLQGIPFAQ------------LSAGGAHSFAITLSGAVFGWG--- 215

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     +  GQLG  +  D   P ++    + + + VSCG +HT AL
Sbjct: 216 ---------KNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAAL 257


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 179/374 (47%), Gaps = 55/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H + +T+ G  ++ G    G+LG  +  NI    +P  I  L    ++ ++
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 366

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+T+ G+LY WGK   G LG G + +  +P       L GI     A G   +
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 425

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG + S+         + PR +  L+G++   AA G  H
Sbjct: 426 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 476

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     GN   +  P+ ++ L  P   +V
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGD--GDKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D   +P RV+G   +S V++I       
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEI------- 586

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H A + S  ++ TWG G            S G+LGHG+  D   PT+V   ++ +
Sbjct: 587 ACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQ 634

Query: 413 ALQVSCGFNHTGAL 426
              ++CG N T A+
Sbjct: 635 VKSIACGTNFTAAV 648



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +  +P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G  GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555

Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  Q GN HA  + P+ +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG 
Sbjct: 556 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G +D  +SP  V     ES  D+   SI   +CG   TAA+
Sbjct: 616 GDVDDRNSPTLV-----ESLKDKQVKSI---ACGTNFTAAV 648



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 120/279 (43%), Gaps = 51/279 (18%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +V VT  G+  SWG    GRLGHG +S+I         
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
             P+LI  L    +++ A G  HS  +  +G +Y +G    D  +   GN       +R 
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + + +  +   + CG YHT V+TS G+L+T+G    G LG G    +  P          
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-------- 458

Query: 342 PVDQIC-TSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSS 387
            VD +     V  +CG  HTAA+ E             GK+ TWG G             
Sbjct: 459 -VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK----------- 506

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LGHGN    + PT V         QV+CG + T AL
Sbjct: 507 -GRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVAL 544



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 24/206 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ ++P LI  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG +H+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 359 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 417

Query: 346 ICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
           I       +CG  HTA + S G++ T+G     GTF        G LGHG+      P  
Sbjct: 418 I-------ACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDKKSVFIPRE 458

Query: 405 VNFGENVKALQVSCGFNHTGALLEYV 430
           V+  + ++ ++ +CG  HT A++E +
Sbjct: 459 VDSLKGLRTVRAACGVWHTAAVVEVM 484


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 162/332 (48%), Gaps = 28/332 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      + SA +   +  L        H+L LTE+G V++ G  D+
Sbjct: 1046 GEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDY 1105

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+QI+ G+ HS+ +TVDG+L  +G    G+LGLG 
Sbjct: 1106 GKLG-HGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGT 1164

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
               +    P +V+ L        A G   +V V+  G    ++G G  G+LG G  S+  
Sbjct: 1165 VCNR--KTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSA-- 1220

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                   + TP  I+ L G+KVK  A G   S  +  +G V  +G DR + +   Q   H
Sbjct: 1221 -------KSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGH 1273

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
               P  ++ L   + EEVV G  HT  LTS G ++ WG N +G LG+G    +  P+ + 
Sbjct: 1274 CT-PQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLG 1332

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
            G  S  P+ QI       S G  H+AA S  K
Sbjct: 1333 GLGSSEPIKQI-------SAGRTHSAAWSGAK 1357



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 14/253 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  +ACG  H+  +T  G +   G  D+G+
Sbjct: 1100 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGR 1159

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+   +     P R+  L+   +  ++ G +H+  ++ DG   + +G    G+LGLG  
Sbjct: 1160 LGLG-TVCNRKTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNT 1218

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            +AK  P+  K+E LSG+  K+ A G + SVA+T  G VL+W   G  RL    E+ + G 
Sbjct: 1219 SAKSTPV--KIEALSGLKVKKVACGTQFSVALTRDGFVLTW---GQDRLIGQTEAQMRG- 1272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   TP+ +  L G  ++    G  H+  +  +G V+ +G  A  ++        R 
Sbjct: 1273 -----HCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVRE 1327

Query: 281  PSLISKLPYSEEV 293
            P L+  L  SE +
Sbjct: 1328 PQLLGGLGSSEPI 1340



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 39/313 (12%)

Query: 121  LKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            ++K+   I+    H     + G  + Y+WG   +GQL    +A + +  P      S   
Sbjct: 968  VQKDAAIIAWSVQHPDDWQMGGSCDAYLWGGGRHGQLC---EAGRSVLTPLHTSSFSS-- 1022

Query: 179  TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
             +Q   G   +  +   G VL+ G G  GRLG G    +         ++  ++  L+G 
Sbjct: 1023 AQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HSLTIVSALQGF 1073

Query: 239  KVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EV 293
             V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   E  ++
Sbjct: 1074 VVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQI 1133

Query: 294  VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
             CG  H+ V+T  G+L T+G+ + G LG+G++    +PERV+   +          I  V
Sbjct: 1134 ACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALEN--------YHIGHV 1185

Query: 354  SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
            +CG  HT  +S     TW +G        DG    G+LG GN      P  +     +K 
Sbjct: 1186 ACGLNHTVCVSADGSTTWAFG--------DG--DYGKLGLGNTSAKSTPVKIEALSGLKV 1235

Query: 414  LQVSCGFNHTGAL 426
             +V+CG   + AL
Sbjct: 1236 KKVACGTQFSVAL 1248


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 180/368 (48%), Gaps = 35/368 (9%)

Query: 43  WGNGDYGRLGLG-SLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LG G SL++    P  C+      +K +ACGG HTLFL E G VY+ G N  
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG S        P  ++ L +E +  I+ G  HS A+++ G LY WG  ++GQLG   
Sbjct: 64  GQLGHSHE---GTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG-HA 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  IP  ++ LS    +Q + G +  +A+   G++ +WG    G+LG G      G
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGN-----G 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F+   S+ +P+ +K LEG+ +    AG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 175 FI---SQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKE 231

Query: 280 RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   + V   CG  HT +LT  G L+T+G+  +G LG  S+    +P RV   
Sbjct: 232 TPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRV--- 288

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                ++ + + +  ++CG KHT A             S GT    G    GQLG G++ 
Sbjct: 289 -----LELMGSEVSQIACGRKHTLAFVP----------SSGTLYAFGCGDLGQLGTGHEN 333

Query: 398 DYIHPTIV 405
           +   PT+V
Sbjct: 334 NVKCPTVV 341



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 18/301 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P   +   +  +K +ACG +H+L L+  G +Y+ G  + GQLG +    YS  P  I  
Sbjct: 74  HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKK 133

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++++ Q+S G  H  A+  DG+L+ WG+N++GQLGLG         P KV+ L GI  
Sbjct: 134 LSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSS-PQKVKSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q   G   S A++  G V  WG   +G+LG   E           + TP  +K L   K
Sbjct: 193 AQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQV---------KETPCHVKPLRTHK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + + G ++ FG     ++     ++   P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS----ESPVDQICTSIVL 352
            HT     S G LY +G  + G LG G  + +  P  V+G ++    + P+   C +  +
Sbjct: 304 KHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVKGKWASCSGQIPMHADCAAYNI 363

Query: 353 V 353
           V
Sbjct: 364 V 364



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 163/339 (48%), Gaps = 40/339 (11%)

Query: 96  GLNDFGQLGISENIGYSL-EPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQLG   ++  ++ EP   +  L   V +++ G  H+  +  DG++Y  G N  G
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   +     P+ T    L+    K  A G   S+A++  G + SWGAG  G+LGH  
Sbjct: 65  QLGHSHEGTHPAPVAT----LAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGH-- 118

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-- 271
            +++  + R      PR+IK+L   K++  + G  H   + ++G+++ +G     ++   
Sbjct: 119 -ATVEHYSR-----IPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172

Query: 272 --FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             F   +  ++   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+    V  
Sbjct: 173 NGFISQSSPQKVKSLEGIPLAQ-VTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKE 231

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
           +P  V+ P     V       V +SCG +HTA +++ G + T+G GGS            
Sbjct: 232 TPCHVK-PLRTHKV-------VYISCGEEHTAILTKAGGLFTFGAGGS------------ 271

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GQLGH +  + I+P  V      +  Q++CG  HT A +
Sbjct: 272 GQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFV 310



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 34/234 (14%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +L WG    G+LG+G          + SE  P          VK  A G  H+  + E+G
Sbjct: 1   MLCWGHSAFGQLGNGH-----SLKNAVSE--PCACTFSLATCVKEVACGGKHTLFLMEDG 53

Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
           +VY  G     ++    EG H   P+ ++ L   + + + CG  H+  L+  G LY+WG+
Sbjct: 54  QVYSCGWNGEGQLGHSHEGTH---PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGA 110

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGW 373
             +G LG  +++      R+    S+  + Q+       SCG  H  A+  +G++ TW  
Sbjct: 111 GNDGQLGHATVEHYSRIPRIIKKLSQQKIQQM-------SCGDDHCLALGDDGQLFTW-- 161

Query: 374 GGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     G ++ GQLG GN  +    P  V   E +   QV+ G +H+ AL
Sbjct: 162 ----------GQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFAL 205


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 159/309 (51%), Gaps = 31/309 (10%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4113

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4114 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4172

Query: 160  KAAKVIPIPTKVECLSG----------IFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGR 208
             + K   +P +V  L G          +F  Q A G   ++AV+  G ++ ++G G  G+
Sbjct: 4173 TSNK--KLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGK 4230

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
            LG G          ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +
Sbjct: 4231 LGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4281

Query: 268  DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
                 +  NH  RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  
Sbjct: 4282 GLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4340

Query: 326  DVLHSPERV 334
            + +  P  V
Sbjct: 4341 NHVREPTLV 4349



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 545 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 711 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 24/257 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4108 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4167

Query: 103  LGISENIGYSLEPLRISGLKKEVV-----------QISTGYHHSSAITVDGEL-YMWGKN 150
            LG+       L P R++ L+   +           Q++ G +H+ A++ DG + + +G  
Sbjct: 4168 LGLGNTSNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDG 4226

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
              G+LGLG   AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L 
Sbjct: 4227 DYGKLGLGNSTAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 4284

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             G         R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++
Sbjct: 4285 EG---------RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4335

Query: 271  LFQEGNHARRPSLISKL 287
                 NH R P+L++ L
Sbjct: 4336 GLGHTNHVREPTLVTVL 4352



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 59/385 (15%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 418

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 479 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 529

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 530 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 589

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CG 356
           G LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG
Sbjct: 590 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 645

Query: 357 WKHTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI- 400
                A        ++  +I+    G SH    S D      G++S GQ G GN    I 
Sbjct: 646 SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 705

Query: 401 HPTIVNFGENVKALQVSCGFNHTGA 425
            P  V+  + +   Q+S G +H+ A
Sbjct: 706 KPKKVSGLDGIAIQQISAGTSHSLA 730



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 174/406 (42%), Gaps = 61/406 (15%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4003 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4059

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4060 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4118

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4119 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4175

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIA----------AAGFLHSACIDENGR-VYIFGDRA 266
                    +  P  +  LEG ++  A          A G  H+  +  +G  V+ FGD  
Sbjct: 4176 --------KKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGD 4227

Query: 267  VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              K+          P  +  L     ++V CG   +  LT  G +YT+G +    L  G 
Sbjct: 4228 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 4287

Query: 325  IDVLHSPERVQGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFS 381
                + P+++           +   +V+  V+ G +HT A+ S G +  WG         
Sbjct: 4288 ARNHNRPQQIP----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG--------- 4328

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
                +S GQLG G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4329 ---SNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4369



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 35/318 (11%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3975 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4030

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4031 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4080

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4081 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4139

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + Q   + +
Sbjct: 4140 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQARNNTL 4198

Query: 352  L---VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
                V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+  
Sbjct: 4199 FFLQVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVL 4248

Query: 409  ENVKALQVSCGFNHTGAL 426
              +   +V+CG   + AL
Sbjct: 4249 CGIGIKKVACGTQFSVAL 4266



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 366 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 425

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 480

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 481 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 162/343 (47%), Gaps = 34/343 (9%)

Query: 92  VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +++ G N++G+L +   N    LE +      K +  I+ G    + +  DG ++  G N
Sbjct: 471 LFSCGQNNYGELCLGHCNSTSKLEHVPFFS-AKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
            +GQ G G    +VI I T V  LSGI      AA G E  +AV   G V SWG    G+
Sbjct: 530 KSGQCGNGTFEERVI-IATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQ 588

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LG G  S+I      +  +TPR+I  L E   +  AA  + HSA +  NG + +FG    
Sbjct: 589 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640

Query: 268 DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++      H   P L+  L      EV CG YHT  +TSGGE+Y++G N+ G LG+G  
Sbjct: 641 GQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHA 700

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
             +  P  V+    ES  D+    IV VSCG+ HT  ISE GK++TW            G
Sbjct: 701 RNMKVPTLVKTSLGES--DE---KIVAVSCGYYHTVTISEKGKLITW------------G 743

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            +  GQLG G+         V    + K    SCG  HT  L+
Sbjct: 744 RNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILM 786



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 49  GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G+ G G+ E R     PV   +    ++ A A G  H L +   G VY+ G ND GQLG+
Sbjct: 532 GQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGL 591

Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
              I  S  P  I  L+++  +   +  YHHS+ ++ +GEL M+G N  GQLGL     +
Sbjct: 592 GSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQ 651

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P  V+ LS     + A G   ++A+T GG+V S+G    G+LG G   ++      
Sbjct: 652 H--TPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNM------ 703

Query: 224 TSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                P L+K   G    K+   + G+ H+  I E G++  +G     ++     +H   
Sbjct: 704 ---KVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNS 760

Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              +  LP S ++    CG YHT +L S G +  +G N  G LG GS
Sbjct: 761 AQYV-PLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGS 806



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 18/227 (7%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+LGLGS   +S    ++ S  EK+ +   A    H+  ++  G +   G+ND 
Sbjct: 581 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+ ++  +   P  +  L  +V+ +++ G +H+ AIT  GE+Y +GKN  GQLGLG 
Sbjct: 641 GQLGL-DHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGH 699

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             A+ + +PT V+   G   ++    + G+  +V ++  GK+++WG    G+LG G +  
Sbjct: 700 --ARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDH 757

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                +++++Y P  +      K+K A+ G  H+  +  NGRV +FG
Sbjct: 758 -----KNSAQYVPLPLSS----KIKTASCGCYHTLILMSNGRVMVFG 795



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G  D G+LGL   + +  P +  +     +  +ACG  HT+ +T  G VY+ G ND+G
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYG 693

Query: 102 QLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+       +  L  + L    +++V +S GY+H+  I+  G+L  WG+N  GQLG+G
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753

Query: 159 ----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
               K +A+ +P+P   +       K A+ G   ++ +   G+V+ +G    G+LG G  
Sbjct: 754 SKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSR 807

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           +     L S     P     L   +V   AAGF  S
Sbjct: 808 T-----LPSADLPLPVPSNSLANDEVVRIAAGFYSS 838


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 154/297 (51%), Gaps = 23/297 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +  + P + SAF+ + +  L  +CG   H++ LTETG V++ G  DF
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3134

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ ++VVQ++ G+ HS+ +T DG+L+ +G   +G+LG   
Sbjct: 3135 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3193

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K++P   +V  L G    Q + G   ++ ++  G  V ++G G  G+LG G      
Sbjct: 3194 TSNKMLP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3246

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
                ST++Y P+ +++L    +K    G   S  +  +G VY FG   +    D ML   
Sbjct: 3247 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNR 3302

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
             N    PSL     + E++  G  H   L+S G++Y WG N  G LG+G  + +  P
Sbjct: 3303 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEP 3357



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 24/302 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG   ++  P         ++K ++       HTL +T  G V++ G  ++
Sbjct: 437 GKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G+LG   N      P  I G    K VV  S GY HS+A+T DGELY WG+   G+LG  
Sbjct: 497 GKLG-HGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHS 555

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   +PT V+ +SG+   Q A G   ++AV   G+ V S+G G +G+LGHG  + +
Sbjct: 556 DSQSR--NMPTLVKDISGV--GQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRV 611

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L G  ++   AG   S  +   G+V+ +G  +       E   
Sbjct: 612 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 661

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERV 334
           + RP  +  L  ++  ++ CG  H   L+   E+Y WG+N  G  G G     +  P++V
Sbjct: 662 SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKV 721

Query: 335 QG 336
            G
Sbjct: 722 LG 723



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 174/398 (43%), Gaps = 55/398 (13%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWGNG YG+L  G+  +   P +  +  +   + + CG   +  +   G V A G   +G
Sbjct: 3024 LWGNGRYGQLA-GTGTNLTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAVGEGQYG 3080

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    + P  IS  +  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3081 RLGQGNSDDLYV-PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH 3139

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q A GF  S  VT  GK+ ++G+G SGRLG       
Sbjct: 3140 GNNERQRRP--KQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQ------ 3191

Query: 218  LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
                RSTS +  P  +  LEG  V   + G  H+  +  +G  V+ FGD    K+     
Sbjct: 3192 ----RSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3247

Query: 276  NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 P  + +L     ++V CG   + V+   G +YT+G      L    +    +P+ 
Sbjct: 3248 TAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQV 3307

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   +G F E            ++ G +H  A+S  G +  WG             +S G
Sbjct: 3308 VPSLEGLFIED-----------IAVGCEHVLALSSTGDVYAWGC------------NSEG 3344

Query: 390  QLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            QLG G+      PT++    G+N+K  Q+S G  H+ A
Sbjct: 3345 QLGLGHCNPVKEPTLITALQGKNIK--QISAGRCHSSA 3380



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 151/340 (44%), Gaps = 38/340 (11%)

Query: 92  VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           VY  G N   QL  G  E I   L P    G   +   I  G + + +++ DG +   GK
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 438

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAGGSGR 208
            S G+LGLG    + +P    +E    I    ++ G +  ++A+T  G+V SWG G  G+
Sbjct: 439 GSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGK 498

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAV 267
           LGHG          S ++  P++I+     K+ + A+AG+ HSA + ++G +Y +G+   
Sbjct: 499 LGHGN---------SATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDF 549

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSID 326
            ++   +      P+L+  +    +V CG  HT  +   G  ++++G  +NG LG G  +
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTN 609

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 386
            ++ P+ ++       + ++C             A  S G++  WG G   G  S +  S
Sbjct: 610 RVYRPKVIEA-LHGFIIRKVCAG------SQSSLALTSAGQVFAWGCGSCLGCGSSETTS 662

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                        + P  V      K + +SCG +H  AL
Sbjct: 663 -------------LRPRFVEDLSITKIIDISCGDSHCLAL 689



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 143  ELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            ++Y+WG    GQL G G      + +PT    LS   T+Q   G   S  +   G V + 
Sbjct: 3021 DVYLWGNGRYGQLAGTGTN----LTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAV 3074

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGR 258
            G G  GRLG G    +         Y P +I   +G  V   + + G   HS  + E G 
Sbjct: 3075 GEGQYGRLGQGNSDDL---------YVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGE 3125

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
            V+ +GD    K+        RRP  I  L   E+VV   CG  H+ V+T+ G+L+T+GS 
Sbjct: 3126 VFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
            E+G LG  S      PERV        V Q       VSCG  HT  +S   +  W +G 
Sbjct: 3185 ESGRLGQRSTSNKMLPERVAA-LEGYHVGQ-------VSCGLNHTLVLSLDGMAVWAFG- 3235

Query: 376  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                   DG    G+LG G+     +P  V    N    +V CG
Sbjct: 3236 -------DGDY--GKLGAGSSTAKYYPQKVEQLCNKGMKKVCCG 3270



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 22/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+G+YG+LG G+  ++  P +     F K  + A A G  H+  +T+ G +Y  G  DF
Sbjct: 491 WGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASA-GYRHSAAVTKDGELYTWGEGDF 549

Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
           G+LG S++   ++  L   ISG    V Q++ G  H+ A+  DG  ++ +G   NG+LG 
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISG----VGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGH 605

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G      +  P  +E L G   ++   G + S+A+T  G+V +WG G    LG G     
Sbjct: 606 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 658

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                 T+   PR +++L   K+   + G  H   +     VY +G+  +
Sbjct: 659 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 703



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V  A     ++ +  G   +L LT  G V+A G      
Sbjct: 595 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 654

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G SE    SL P  +  L   +++ IS G  H  A++ + E+Y WG N+ GQ G G  +
Sbjct: 655 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 712

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSW 201
              I  P KV  L G+  +Q   G   S+   AV    ++++W
Sbjct: 713 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG    +SR  P +        +  +ACG +HT+ + + G  V++ G  D G
Sbjct: 544 WGEGDFGRLGHSDSQSRNMPTLVKDIS--GVGQVACGSSHTIAVAQDGRTVWSFGGGDNG 601

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +       P  I  L   ++ ++  G   S A+T  G+++ WG  S   LG G  
Sbjct: 602 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 658

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE LS       + G    +A++   +V +WG    G+ G G  S+ +  
Sbjct: 659 ETTSL-RPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 716

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
                   P+ +  LEGV ++   AG  HS
Sbjct: 717 -------RPKKVLGLEGVSIQQITAGTSHS 739



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 20/154 (12%)

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            G +   P+L   L  +++VVCG   + ++ S G +   G  + G LG G+ D L+ P  +
Sbjct: 3037 GTNLTVPTLAPSLSQTQQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTII 3096

Query: 335  QGPFSESPVDQICTSIVLVSCGWK-HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
               F    V Q+ TS     CG   H+ A++E G++ +WG     G F        G+LG
Sbjct: 3097 SA-FQGYVVTQLVTS-----CGSDGHSMALTETGEVFSWG----DGDF--------GKLG 3138

Query: 393  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            HGN+     P  +   +    +Q++CGF H+  +
Sbjct: 3139 HGNNERQRRPKQIEALQGEDVVQLACGFRHSAVV 3172


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 154/297 (51%), Gaps = 23/297 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +  + P + SAF+ + +  L  +CG   H++ LTETG V++ G  DF
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3795

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ ++VVQ++ G+ HS+ +T DG+L+ +G   +G+LG   
Sbjct: 3796 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3854

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K+ P   +V  L G    Q + G   ++ ++  G  V ++G G  G+LG G      
Sbjct: 3855 TSNKMQP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3907

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
                ST++Y P+ +++L    +K    G   S  +  +G VY FG   +    D ML   
Sbjct: 3908 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNR 3963

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
             N    PSL     + E++  G  H   L+S G++Y WG N  G LG+G  +++  P
Sbjct: 3964 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEP 4018



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 147/303 (48%), Gaps = 26/303 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGA--HTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++  P      E H    K  +  G+  HTL +T  G V++ G  +
Sbjct: 394 GKGSYGRLGLGDSNNQSMPKKL-VLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGE 452

Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +G+LG   N      P  + G    K VV  S GY HS+A+T DGELY WG+   G+LG 
Sbjct: 453 YGKLG-HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESS 216
               ++    PT V+ +SG+   Q A G   ++AV   G+ + S+G G +G+LGHG  + 
Sbjct: 512 SDSQSR--NTPTLVKDISGV--GQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNR 567

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +         Y P++I+ L G  ++   AG   S  +   G+V+ +G  +       E  
Sbjct: 568 V---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT 618

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPER 333
            + RP  +  L  ++  ++ CG  H   L+   E+Y WG+N  G  G G     +  P++
Sbjct: 619 -SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKK 677

Query: 334 VQG 336
           V G
Sbjct: 678 VLG 680



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 173/398 (43%), Gaps = 55/398 (13%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWGNG YG+L  G+  +   P +     +   + + CG   +  +   G V A G   +G
Sbjct: 3685 LWGNGRYGQLA-GTGTNLTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMAVGEGQYG 3741

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   N      P  IS  +  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3742 RLG-QGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH 3800

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q A GF  S  VT  GK+ ++G+G SGRLG       
Sbjct: 3801 GNNERQRRP--KQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQ------ 3852

Query: 218  LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
                RSTS +  P  +  LEG  V   + G  H+  +  +G  V+ FGD    K+     
Sbjct: 3853 ----RSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3908

Query: 276  NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 P  + +L     ++V CG   + VL + G +YT+G      L    +    +P+ 
Sbjct: 3909 TAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQV 3968

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   +G F E            ++ G +H  A+S  G I  WG             +S G
Sbjct: 3969 VPSLEGLFIED-----------IAVGCEHVLALSSTGDIYAWGC------------NSEG 4005

Query: 390  QLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
            QLG G+      PT++    G+N+K  Q+S G  H+ A
Sbjct: 4006 QLGLGHCNLVKEPTLITALQGKNIK--QISAGRCHSSA 4041



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 152/342 (44%), Gaps = 42/342 (12%)

Query: 92  VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           VY  G N   QL  G  E I   L P    G   +   I  G + + +++ DG +   GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 395

Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            S G+LGLG    + +P    +E    +  +F+ + + G   ++A+T  G+V SWG G  
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEVFSWGDGEY 453

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDR 265
           G+LGHG          S ++  P++++     K+ + A+AG+ HSA +  +G +Y +G+ 
Sbjct: 454 GKLGHGN---------SATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEG 504

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGS 324
              ++   +      P+L+  +    +V CG  HT  +   G  ++++G  +NG LG G 
Sbjct: 505 DFGRLGHSDSQSRNTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGD 564

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
            + ++ P+ ++       + ++C             A  S G++  WG G   G  S + 
Sbjct: 565 TNRVYRPKVIEA-LHGFIIRKVCAG------SQSSLALTSAGQVFAWGCGSCLGCGSSET 617

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            S             + P  V      K + +SCG +H  AL
Sbjct: 618 TS-------------LRPRFVEDLSITKIIDISCGDSHCLAL 646



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 123/285 (43%), Gaps = 41/285 (14%)

Query: 142  GELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
             ++Y+WG    GQL G G      + +PT   CLS   T+Q   G   S  +   G V++
Sbjct: 3681 SDVYLWGNGRYGQLAGTGTN----LTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMA 3734

Query: 201  WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENG 257
             G G  GRLG G    +         + P +I   +G  V   + + G   HS  + E G
Sbjct: 3735 VGEGQYGRLGQGNSDDL---------FVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3785

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGS 314
             V+ +GD    K+        RRP  I  L   E+VV   CG  H+ V+T+ G+L+T+GS
Sbjct: 3786 EVFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGS 3844

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
             E+G LG  S      PERV        V Q       VSCG  HT  +S   +  W +G
Sbjct: 3845 GESGRLGQRSTSNKMQPERVAA-LEGYHVGQ-------VSCGLNHTLVLSLDGMAVWAFG 3896

Query: 375  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                    DG    G+LG G+     +P  V    N    +V CG
Sbjct: 3897 --------DG--DYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCG 3931



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 22/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+G+YG+LG G+  ++  P +     F K  + A A G  H+  +T  G +Y  G  DF
Sbjct: 448 WGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASA-GYRHSAAVTNDGELYTWGEGDF 506

Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
           G+LG S++   +   L   ISG    V Q++ G  H+ A+  DG  ++ +G   NG+LG 
Sbjct: 507 GRLGHSDSQSRNTPTLVKDISG----VGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGH 562

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G      +  P  +E L G   ++   G + S+A+T  G+V +WG G    LG G     
Sbjct: 563 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 615

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                 T+   PR +++L   K+   + G  H   +     VY +G+  +
Sbjct: 616 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 660



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 7/184 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V  A     ++ +  G   +L LT  G V+A G      
Sbjct: 552 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 611

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G SE    SL P  +  L   +++ IS G  H  A++ + E+Y WG N+ GQ G G  +
Sbjct: 612 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 669

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              I  P KV  L G+  +Q   G   S+   AV    ++++W       L     + + 
Sbjct: 670 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDLEESTFTYLC 728

Query: 219 GFLR 222
            FL+
Sbjct: 729 NFLK 732



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG    +SR  P +        +  +ACG +HT+ + + G  +++ G  D G
Sbjct: 501 WGEGDFGRLGHSDSQSRNTPTLVKDIS--GVGQVACGSSHTIAVAQDGRTMWSFGGGDNG 558

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +       P  I  L   ++ ++  G   S A+T  G+++ WG  S   LG G  
Sbjct: 559 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 615

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE LS       + G    +A++   +V +WG    G+ G G  S+ +  
Sbjct: 616 ETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 673

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
                   P+ +  LEGV ++   AG  HS
Sbjct: 674 -------RPKKVLGLEGVSIQQITAGTSHS 696



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 20/154 (12%)

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            G +   P+L   L  +++VVCG   + ++ S G +   G  + G LG G+ D L  P  +
Sbjct: 3698 GTNLTLPTLAPCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTII 3757

Query: 335  QGPFSESPVDQICTSIVLVSCGWK-HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
               F    V Q+ TS     CG   H+ A++E G++ +WG     G F        G+LG
Sbjct: 3758 SA-FQGYVVTQLVTS-----CGSDGHSMALTETGEVFSWG----DGDF--------GKLG 3799

Query: 393  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            HGN+     P  +   +    +Q++CGF H+  +
Sbjct: 3800 HGNNERQRRPKQIEALQGEDVVQLACGFRHSAVV 3833


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 155/300 (51%), Gaps = 24/300 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            G+LG   +     +  R     +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG  
Sbjct: 4111 GKLGHGNS-----DRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT 4165

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILG 219
            + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G       
Sbjct: 4166 SNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN------ 4217

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHA 278
               ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH 
Sbjct: 4218 ---STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH- 4273

Query: 279  RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V G
Sbjct: 4274 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4333



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP      +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4159

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4160 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4218

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK  P   K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4219 TAKSSP--QKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4268

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4269 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4327

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4328 PTLVTGL 4334



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 22/215 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
            +GNGDYGRLGLG+  ++  P   +A E + +  +ACG  HTL ++  G  V+A G  D+G
Sbjct: 4152 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4211

Query: 102  QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            +LG+  +   S  P +I      G+KK    ++ G   S A+T DG +Y +G++    +G
Sbjct: 4212 KLGLGNSTAKS-SPQKIDVLCGIGIKK----VACGTQFSVALTKDGHVYTFGQDR--LIG 4264

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            L +  A+    P ++  L+G+  +  A+G E ++A+   G V +WG+   G+LG G  + 
Sbjct: 4265 LPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNH 4324

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +           P L+  L+G  V+  +AG  HSA
Sbjct: 4325 V---------REPTLVTGLQGKNVRQISAGRCHSA 4350



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 169/396 (42%), Gaps = 56/396 (14%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P         G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRPX-------QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4167

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4168 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4219

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4220 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4279

Query: 335  QGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
                       +   +++  V+ G +HT A+ S G +  WG             +S GQL
Sbjct: 4280 P----------VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQL 4317

Query: 392  GHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4318 GLGHTNHVREPTLVTGLQGKNVR--QISAGRCHSAA 4351



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 137/315 (43%), Gaps = 44/315 (13%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP         EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX------QGEEVV 4131

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV               I 
Sbjct: 4132 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG--------YQIG 4183

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  ++    +
Sbjct: 4184 QVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGI 4233

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 4234 GIKKVACGTQFSVAL 4248



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 160/308 (51%), Gaps = 30/308 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4097

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4098 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4156

Query: 160  KAAKVIPIPTKVECLSGIFTKQA---------ALGFEQSVAVTGGGKVL-SWGAGGSGRL 209
             + K   +P +V  L G    QA         A G   ++AV+  G ++ ++G G  G+L
Sbjct: 4157 TSNK--KLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVD 268
            G G          ST++ +P+ +  L G+ +K  A G   S  + ++G+VY FG DR + 
Sbjct: 4215 GLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIG 4265

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                +  NH  RP  +  L     E+V  G  HT  LTS G++Y WGSN  G LG+G  +
Sbjct: 4266 LPEGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTN 4324

Query: 327  VLHSPERV 334
             +  P  V
Sbjct: 4325 HVREPTLV 4332



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  VS G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQVSAGTSHSLAWTALPRDRQVVAW 745



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 23/256 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4092 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4151

Query: 103  LGISENIGYSLEPLRISGL----------KKEVVQISTGYHHSSAITVDGEL-YMWGKNS 151
            LG+       L P R++ L          K  +  ++ G +H+ A++ DG + + +G   
Sbjct: 4152 LGLGNTSNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGD 4210

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             G+LGLG   AK    P KV+ L GI  K+ A G + SVA+T  G+V ++G      L  
Sbjct: 4211 YGKLGLGNSTAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPE 4268

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
            G         R+ +   P+ +  L GV ++  A G  H+  +   G +Y +G  +  ++ 
Sbjct: 4269 G---------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLG 4319

Query: 272  FQEGNHARRPSLISKL 287
                NH R P+L++ L
Sbjct: 4320 LGHTNHVREPTLVTVL 4335



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 175/405 (43%), Gaps = 60/405 (14%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3987 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4043

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4044 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4102

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4103 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4159

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIA---------AAGFLHSACIDENGR-VYIFGDRAV 267
                    +  P  +  LEG ++  A         A G  H+  +  +G  V+ FGD   
Sbjct: 4160 --------KKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDY 4211

Query: 268  DKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
             K+          P  +  L     ++V CG   +  LT  G++YT+G +    L  G  
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRA 4271

Query: 326  DVLHSPERVQGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 382
               + P++V           +   +V+  V+ G +HT A+ S G I  WG          
Sbjct: 4272 RNHNRPQQVP----------VLAGVVIEDVAVGAEHTLALTSTGDIYAWG---------- 4311

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
               +S GQLG G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4312 --SNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4352



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 170/383 (44%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQICTSI------------------VLVSCGWK 358
           LG G  + ++ P   E +QG F    + ++C                       + CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   QVS G +H+ A
Sbjct: 710 KKVSGLDGIAIQQVSAGTSHSLA 732



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 141/316 (44%), Gaps = 32/316 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3959 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4014

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4015 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4064

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4065 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4123

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV              SI+
Sbjct: 4124 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSII 4183

Query: 352  L-VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
              V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    
Sbjct: 4184 CSVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCG 4233

Query: 411  VKALQVSCGFNHTGAL 426
            +   +V+CG   + AL
Sbjct: 4234 IGIKKVACGTQFSVAL 4249



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+++T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S ++T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQVSAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 164/342 (47%), Gaps = 28/342 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+ G G  ++   P    A +   +   A G  ++ F+T  G +Y TG ND  Q
Sbjct: 42  WGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQ 101

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    +LEP+R+S L+   V  ++ G  H  A+  +G L  WG N  GQLG G+  
Sbjct: 102 LGV-KGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A     P  ++ + G    + A G   S+A+T  G+V S+G G  G LGHG         
Sbjct: 161 ASAA-QPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGD-------- 211

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +   P L++ L    +   AAG   SA +  +GRV+ +G     ++   E  +A  P
Sbjct: 212 -VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLP 270

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-------IDVLHSPERV 334
             +  +  + +V CG +H   LT  GE+YTWG + +G LG GS          L SP RV
Sbjct: 271 QPVPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRV 330

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
                +S  DQ   SI  VS G +H+  +S G+ L WG G +
Sbjct: 331 -----DSLADQ---SIRQVSAGARHSFFVSPGEQL-WGAGAN 363



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 61/299 (20%)

Query: 41  ALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A WG+ +YG+LG G +  S  +P V           +A G  H+L LT +G VY+ G   
Sbjct: 144 AAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGS 203

Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           FG LG  + +    +P  +  L  E +V I+ G + S+A+++ G ++ WG+N  GQLG G
Sbjct: 204 FGALGHGD-VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNG 262

Query: 159 KKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           +     +P P     + GI    Q A G    +A+T  G+V +WG   SG+LG G   S 
Sbjct: 263 EFGNAFLPQP-----VPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQG---SN 314

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           LG             + L G              C+    RV    D+++          
Sbjct: 315 LGS------------EALNG--------------CLCSPSRVDSLADQSI---------- 338

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
                         +V  G  H+  ++ G +L+  G+N+ G L + S+  +  P RV G
Sbjct: 339 -------------RQVSAGARHSFFVSPGEQLWGAGANDEGQLALQSVPSVALPTRVPG 384



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 44/321 (13%)

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           EP+   G+++++      +           LY WG++  GQ G G+      P P  V+ 
Sbjct: 14  EPMEADGMERQL-----SWALPELPPAVSSLYTWGRSDLGQTGSGRDQNSTAPEP--VQA 66

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLI 232
           L G     AA G   S  VT  G++ + G+  + +LG  G+E ++           P  +
Sbjct: 67  LQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVAL----------EPIRV 116

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKL--PY 289
             LE   V   A G  H   + +NG +  +G     ++   E G  A +P ++ ++   +
Sbjct: 117 SALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAH 176

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
              V  G  H+  LTS G++Y++G    G LG G ++    P  VQ  + E        +
Sbjct: 177 FARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPE--------A 228

Query: 350 IVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           IV ++ G   +AA+S  G++ TW            G +  GQLG+G   +   P  V   
Sbjct: 229 IVSIAAGEYFSAAVSLSGRVFTW------------GRNKYGQLGNGEFGNAFLPQPVPGI 276

Query: 409 ENVKALQVSCGFNHTGALLEY 429
           E  +A+QV+CG +H  AL  +
Sbjct: 277 E--QAVQVACGDHHCIALTRW 295



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G   + + P      E+     +ACG  H + LT  G VY  GL+  GQ
Sbjct: 251 WGRNKYGQLGNGEFGNAFLPQPVPGIEQ--AVQVACGDHHCIALTRWGEVYTWGLHSSGQ 308

Query: 103 LGISENIGYSL------EPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
           LG   N+G          P R+  L  + + Q+S G  HS  ++   +L+  G N  GQL
Sbjct: 309 LGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQL 368

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            L  ++   + +PT+V  L G+  + A    + S+AV
Sbjct: 369 AL--QSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAV 403


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 172/352 (48%), Gaps = 39/352 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
            +HT A   S G I  +G G              GQLG G+  +   P+ V 
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 36/288 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G
Sbjct: 61  NTKGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169

Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
           G+G       SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG      
Sbjct: 170 GLGKEFPSQASPQRVR-SLEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM----- 216

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 -------NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 179/394 (45%), Gaps = 41/394 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P +   F   S+ +LACGGAH + LT  G   + G  + GQ
Sbjct: 23  WGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQ 82

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  E +  +L P  ++ L    +  +S G+ HS  ++  G ++  G  S GQLG G  A
Sbjct: 83  LGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNA 142

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +   P+  KV C   +   Q A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 143 SHCSPV--KVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S   P+++   EGV++   AA   HSA +  +G VY +G        F+    A  P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRG------FKGFEDAHVP 247

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL----GIGSIDVLHSPERVQGP 337
             ++      +V  G  H   ++  GE+Y  G N  G L     IG     H P+  +  
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAK--HFPDLREFN 305

Query: 338 FSESP-VDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
             + P +D   T I  ++ G +H+  ++E G+I TWGWG              GQLG G+
Sbjct: 306 LEKVPGLDG--TKITDIAAGAEHSVIVTEHGEIKTWGWG------------EHGQLGLGD 351

Query: 396 DVDYIHPTIVNFGENVK---ALQVSCGFNHTGAL 426
             D   P  V+   ++    +++V CG   T A+
Sbjct: 352 TRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAV 385



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 36/338 (10%)

Query: 40  AALWGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A  WG G+ G+LG G + S    P   ++ + + +  ++ G +H+ F+++TG V+  G  
Sbjct: 72  ALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDG 131

Query: 99  DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            FGQLG  +N  +   P+++S      V Q++ G  HS  +    ++Y +G    GQLG+
Sbjct: 132 SFGQLGHGDNASH-CSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGV 190

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
                K + +P  V    G+     A   + S AV+  G V +WG G  G     +++ +
Sbjct: 191 SNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGF----EDAHV 246

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEG 275
              L S+  +T               A G+ H+  +   G VY+ G   +  +  L   G
Sbjct: 247 PQCLNSSLNFTK-------------VALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIG 293

Query: 276 NHARRPSL----ISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                P L    + K+P  +     ++  G  H+ ++T  GE+ TWG  E+G LG+G   
Sbjct: 294 PAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTR 353

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
              SP  V   +     D    + + V CG   T A++
Sbjct: 354 DQTSPVTVSLDY-----DLNEAASIRVFCGSGFTFAVT 386



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 14/228 (6%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           F    G+G +G+LG G   S   PV  S F    +  +ACG  H+L L +   VY  G  
Sbjct: 124 FVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSG 183

Query: 99  DFGQLGISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             GQLG+S +   S+  P  +SG +  E+V  +    HS+A++VDG +Y WG+       
Sbjct: 184 KRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGR------- 236

Query: 157 LGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G K  +   +P   +CL S +   + ALG+  ++A++G G+V   G    G L   Q  
Sbjct: 237 -GFKGFEDAHVP---QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNI 292

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     E+    +  L+G K+   AAG  HS  + E+G +  +G
Sbjct: 293 GPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWG 340



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 19/235 (8%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++ WG  + GQLG      +  P       LS I     A G    +A+T  GK LSWG
Sbjct: 19  RVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI--SSLACGGAHVIALTSAGKALSWG 76

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G SG+LGHG+       + S + Y P+ +  L+G  +   +AG+ HS  + + G V+  
Sbjct: 77  RGNSGQLGHGE-------VVSNTLY-PKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTC 128

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           GD +  ++   +      P  +S     +  +V CG  H+ VL  G ++Y +GS + G L
Sbjct: 129 GDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQL 188

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
           G+ +  V    + V  P   S  + +   IV  +    H+AA+S +G + TWG G
Sbjct: 189 GVSNDRV----KSVNVPKVVSGFEGV--EIVGTAANGDHSAAVSVDGHVYTWGRG 237



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 26/153 (16%)

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI--DVLHSPERVQG 336
           P L+ +   S    + CGG H   LTS G+  +WG   +G LG G +  + L+       
Sbjct: 42  PQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLY------- 94

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P + + +D     I  VS GW H+  +S+ G + T G G            S GQLGHG+
Sbjct: 95  PKAVTSLDGYF--ITHVSAGWSHSGFVSDTGFVFTCGDG------------SFGQLGHGD 140

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           +  +  P  V+   ++   QV+CG  H+  LL+
Sbjct: 141 NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLK 173


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 174/390 (44%), Gaps = 43/390 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV  S      + A+A G +HT  LT +G V+  G N FGQ
Sbjct: 295 WGANWSGQLGDGTTTARSTPVAVSGLAS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQ 353

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G +  WG+N +GQLG G    
Sbjct: 354 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTT 412

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P+      +SG+ +   A+  G + + A T  G V+ WG   SG+LG G        
Sbjct: 413 RSTPVA-----VSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT------- 460

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T   TP  +  L G  V   AAG  H+  +  +G V+ +G  +  ++          
Sbjct: 461 --TTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT 517

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P  +S LP     +  GG HTC LTS G +  WG+N +G LG G+     +P  V G   
Sbjct: 518 PVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSG--- 574

Query: 340 ESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                 + + ++ ++ G  HT A+ S G +  W            G +S GQLG G    
Sbjct: 575 ------LPSGVMAIAAGDLHTCALTSSGGVWCW------------GANSSGQLGDGTTTA 616

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              P  V+ G       ++ G  HT AL  
Sbjct: 617 RSTPVAVS-GLPSGVTAIAAGSFHTCALTS 645



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 164/367 (44%), Gaps = 41/367 (11%)

Query: 66  SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           S+F     + A+A GGAHT  LT +G V   G N FGQLG       S  P+ +SGL   
Sbjct: 61  SSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRS-TPVAVSGLTSG 119

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V  I+ GY H+ A+   G +  WG N +GQLG G    +  P+   V  L+   T  AA 
Sbjct: 120 VTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPV--AVSGLASGVTAIAA- 176

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G + + A T  G V+ WG   SG+LG G          +T   TP  +  L G  V   A
Sbjct: 177 GDDHTCARTSSGGVMCWGDNWSGQLGDGT---------TTDRSTPVAVSGL-GSGVTAIA 226

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
           AG  H+  +  +G V+ +GD    ++          P  +S L      +  GG+HTC  
Sbjct: 227 AGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCAR 286

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           TS G +  WG+N +G LG G+     +P  V G         + + +  ++ G  HT A+
Sbjct: 287 TSSGGVMCWGANWSGQLGDGTTTARSTPVAVSG---------LASGVTAIAAGDSHTCAL 337

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFN 421
            S G +  WG    +  F        GQLG G   D   P  V+  G  V A+    G  
Sbjct: 338 TSSGGVWCWG----YNFF--------GQLGDGTTTDRSTPVAVSGLGSGVTAIAA--GDF 383

Query: 422 HTGALLE 428
           HT AL+ 
Sbjct: 384 HTCALMS 390



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 143/297 (48%), Gaps = 20/297 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV  S      + A+A G  HT   T +G V   G N  GQ
Sbjct: 397 WGRNKDGQLGDGTTTTRSTPVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQ 455

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G ++ WG+NS+GQLG G    
Sbjct: 456 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P+      +SG+ ++  A+  G   + A+T  G V+ WGA  SG+LG G        
Sbjct: 515 RGTPVA-----VSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGT------- 562

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T+  TP  +  L    + I AAG LH+  +  +G V+ +G  +  ++          
Sbjct: 563 --TTARSTPVAVSGLPSGVMAI-AAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARST 619

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           P  +S LP     +  G +HTC LTS G ++ WG+N +G LG GS     +P  V G
Sbjct: 620 PVAVSGLPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSG 676



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 171/438 (39%), Gaps = 88/438 (20%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+   R  PV  S      + A+A G AHT  L  +G V   G N  GQ
Sbjct: 91  WGRNGFGQLGDGTTTDRSTPVAVSGLTS-GVTAIAAGYAHTCALMSSGGVMCWGDNWSGQ 149

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A T  G +  WG N +GQLG G    
Sbjct: 150 LGDGTTTDRS-TPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 208

Query: 163 KVIPI-------------------------------------------------PTKVEC 173
           +  P+                                                 P  V  
Sbjct: 209 RSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSG 268

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L+   T  AA GF  + A T  G V+ WGA  SG+LG G          +T+  TP  + 
Sbjct: 269 LASGVTAIAAGGF-HTCARTSSGGVMCWGANWSGQLGDGT---------TTARSTPVAVS 318

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EE 292
            L    V   AAG  H+  +  +G V+ +G     ++          P  +S L      
Sbjct: 319 GLA-SGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTA 377

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           +  G +HTC L S G +  WG N++G LG G+     +P  V G         + + +  
Sbjct: 378 IAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSG---------LVSGVTA 428

Query: 353 VSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGEN 410
           ++ G  HT A  S G ++ WG          D  S  GQLG G   D   P  V+  G  
Sbjct: 429 IAAGDDHTCARTSSGGVMCWG----------DNWS--GQLGDGTTTDRSTPVAVSGLGSG 476

Query: 411 VKALQVSCGFNHTGALLE 428
           V A+    G +HT AL+ 
Sbjct: 477 VTAIAA--GGSHTCALMS 492



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 128/284 (45%), Gaps = 16/284 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  S      + A+A GG HT  LT +G V   G N  GQ
Sbjct: 499 WGRNSSGQLGDGTTTDRGTPVAVSGLPSE-VTAIASGGVHTCALTSSGGVMCWGANWSGQ 557

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V+ I+ G  H+ A+T  G ++ WG NS+GQLG G   A
Sbjct: 558 LGDGTTTARS-TPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTA 616

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA  F  + A+T  G V  WGA  SG+LG G          
Sbjct: 617 RSTPV--AVSGLPSGVTAIAAGSF-HTCALTSSGGVWCWGANWSGQLGDGSY-------- 665

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L    V   AAG  H+     +G V+ +      ++       +  P 
Sbjct: 666 -TDSSTPVAVSGLP-SGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPV 723

Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSI 325
            +S L      +  G  HTC  TS G +  WG+N +G LG G +
Sbjct: 724 AVSGLVSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGRL 767


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 37/339 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG G+   +  P V  A   H +  +ACG  HT  +T+ G V   G  + GQ
Sbjct: 94  WGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQ 153

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    SL P  +S L  E + QI+ G  H+ A++V+GE+Y WG  ++GQLG+GK  
Sbjct: 154 LGQGDWTS-SLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQ 212

Query: 162 AKV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +   +  P KV        +  A G    +A+T   ++ SWG G  GRLG G       
Sbjct: 213 EETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGD------ 266

Query: 220 FLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGD---------RAVDK 269
              S S ++P +++  +E +++   AAG  H+A + +NG ++  G           A  +
Sbjct: 267 ---SESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQ 323

Query: 270 MLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           +  ++    R   L+  +    +       CG  HT V+++ GE++ WG+ E+G LG G 
Sbjct: 324 LTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGG 383

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            +  +SP           +  +   +  VSCG  H+AA+
Sbjct: 384 TEGANSP---------VELTSLRGLVGDVSCGLVHSAAV 413



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 188/414 (45%), Gaps = 47/414 (11%)

Query: 38  RFAALWGNGDYGRLGLGSLESRWRP------------VVCSAFEKHSLKA---LACGGAH 82
           +  +L G G++GRLG G   S+  P            +  +A    SL     +ACGG H
Sbjct: 22  KRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHH 81

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
           T+ +TE G V + G  + GQLG       ++  +  +     V  ++ GY+H++ +T  G
Sbjct: 82  TVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVG 141

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            +  WGK ++GQLG G   + +  +P  V  L     +Q A G   ++A++  G++ SWG
Sbjct: 142 LVMCWGKGNSGQLGQGDWTSSL--LPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWG 199

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG  G+LG G+         +    TP+ ++  E  K +  A G  H   I ++ R++ +
Sbjct: 200 AGADGQLGVGKHQE-----ETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSW 254

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGC 319
           G  A  ++   +      P+++ +   +     V  GG+HT VL+  GE++T G    G 
Sbjct: 255 GLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQ 314

Query: 320 LGIGSIDVLHSPERVQ----GPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
           LG G  D   + ++ +    G      V      I+  +CG  HT  IS  G++  WG  
Sbjct: 315 LGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWG-- 372

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGAL 426
                 +ED     GQLG G       P  +    +++ L   VSCG  H+ A+
Sbjct: 373 -----AAED-----GQLGTGGTEGANSPVELT---SLRGLVGDVSCGLVHSAAV 413



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 65/234 (27%)

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
           GG +    G G  GRLGHG          + S+  P+ ++  +   V ++     H +  
Sbjct: 20  GGKRTSLQGWGEFGRLGHGD---------TLSQLEPKRLRFDKRFPVSLSFTALAHESL- 69

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             NG +Y                                V CGG+HT  +T  GE+ +WG
Sbjct: 70  --NGAIY--------------------------------VACGGHHTVAVTEDGEVVSWG 95

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
               G LG G+      P  V+   +     ++C     V+CG+ HTA +++ G ++ WG
Sbjct: 96  WGNEGQLGSGNAFDQTVPAVVKALSNH----RVCG----VACGYYHTAVVTDVGLVMCWG 147

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G S            GQLG G+    + P  V+   N K  Q++CG  HT AL
Sbjct: 148 KGNS------------GQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL 189



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 26/130 (20%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQICTSI--------VLVSCGWKH 359
           L  WG  E G LG G       P+R++  F +  PV    T++        + V+CG  H
Sbjct: 26  LQGWG--EFGRLGHGDTLSQLEPKRLR--FDKRFPVSLSFTALAHESLNGAIYVACGGHH 81

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           T A++E G++++WGWG              GQLG GN  D   P +V    N +   V+C
Sbjct: 82  TVAVTEDGEVVSWGWGNE------------GQLGSGNAFDQTVPAVVKALSNHRVCGVAC 129

Query: 419 GFNHTGALLE 428
           G+ HT  + +
Sbjct: 130 GYYHTAVVTD 139


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT   + S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 156/336 (46%), Gaps = 42/336 (12%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL----- 118

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
                   S   PRLI++L    +   + G  H   +  +G+ + +G  +  ++     F
Sbjct: 119 ---MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF 175

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP 
Sbjct: 176 PSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            V+   ++         +V +SCG +HTA +++ G + T+G G            S GQL
Sbjct: 235 HVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQL 274

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 36/288 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G
Sbjct: 61  NTKGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169

Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
           G+G       SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG      
Sbjct: 170 GLGKEFPSQASPQRVR-SLEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM----- 216

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 -------NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 71  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 127

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 128 LADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 186

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 187 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 238

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 297

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 298 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 349

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 350 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 388



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A    ++  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 121 KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 180

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 239

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V +WG   +G+LG   E             +P  +K L   K
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE---------DRESPCHVKLLRTQK 290

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 291 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 350

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 351 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 390



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 48/342 (14%)

Query: 98  NDFG--QLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           ND G  Q GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ 
Sbjct: 52  NDLGASQPGISTNLRGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 110

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG  ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG  
Sbjct: 111 GQLGHEREGNK----PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLG-- 164

Query: 213 QESSILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
                   L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++
Sbjct: 165 --------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 216

Query: 271 ----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +
Sbjct: 217 GLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE 275

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 385
              SP  V+   ++         +V +SCG +HTA +++ G + T+G G           
Sbjct: 276 DRESPCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG----------- 316

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            S GQLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 317 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 357



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LGL + E S   P +     + ++  ++CG  H L L   G  +  G N  G
Sbjct: 155 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 214

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +       P R+  L+   + Q++ G  HS A+++ G ++ WG N+ GQLGL  +
Sbjct: 215 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDE 274

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +    P  V+ L        + G E +  +T  G V ++GAG  G+LGH   +     
Sbjct: 275 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN----- 327

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
                E  PR + EL G +V   A G  H+ A +  +G +Y FG
Sbjct: 328 ----DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 367



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+ +G V+A G+N+ G
Sbjct: 208 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAG 267

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+S+       P  +  L+ ++VV IS G  H++ +T  G ++ +G  S GQLG    
Sbjct: 268 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 326

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
             +V   P +V  L G    Q A G + ++A V   G + ++G G  G+LG G   ++
Sbjct: 327 NDEV--NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 382



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 261 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 320

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 321 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 379

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 380 CNVKCPSPVK 389


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 178/374 (47%), Gaps = 55/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H + +T+ G  ++ G    G+LG  +  NI    +P  I  L    ++ ++
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 366

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+T+ G+LY WGK   G LG G + +  +P       L GI     A G   +
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 425

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG + S+         + PR +  L+G++   AA G  H
Sbjct: 426 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 476

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     GN   +  P+ ++ L  P   +V
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D    P RV+G   +S V++I       
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KLPNRVEGKLHKSFVEEI------- 586

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H A + S  ++ TWG G            S G+LGHG+  D   PT+V   ++ +
Sbjct: 587 ACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQ 634

Query: 413 ALQVSCGFNHTGAL 426
              ++CG N T A+
Sbjct: 635 VKSIACGTNFTAAV 648



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +  +P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G  GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555

Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  Q GN HA  + P+ +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG 
Sbjct: 556 PVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G +D  +SP  V     ES  D+   SI   +CG   TAA+
Sbjct: 616 GDVDDRNSPTLV-----ESLKDKQVKSI---ACGTNFTAAV 648



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 120/279 (43%), Gaps = 51/279 (18%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +V VT  G+  SWG    GRLGHG +S+I         
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
             P+LI  L    +++ A G  HS  +  +G +Y +G    D  +   GN       +R 
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + + +  +   + CG YHT V+TS G+L+T+G    G LG G    +  P          
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-------- 458

Query: 342 PVDQIC-TSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSS 387
            VD +     V  +CG  HTAA+ E             GK+ TWG G             
Sbjct: 459 -VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK----------- 506

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LGHGN    + PT V         QV+CG + T AL
Sbjct: 507 -GRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVAL 544



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 24/206 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ ++P LI  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG +H+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 359 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 417

Query: 346 ICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
           I       +CG  HTA + S G++ T+G     GTF        G LGHG+      P  
Sbjct: 418 I-------ACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDKKSVFIPRE 458

Query: 405 VNFGENVKALQVSCGFNHTGALLEYV 430
           V+  + ++ ++ +CG  HT A++E +
Sbjct: 459 VDSLKGLRTVRAACGVWHTAAVVEVM 484


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 191/416 (45%), Gaps = 34/416 (8%)

Query: 15  KQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK 74
           K D KL  +LG+    +S          WG    G LG G       P V  A     ++
Sbjct: 350 KADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIR 409

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYH 133
            +ACG  HTL ++  G +++ G    G+LG+ +NI     PL+I   +   +  +S    
Sbjct: 410 TVACGTEHTLAVSVNGEMFSWGCGRGGKLGL-KNILDRYMPLKIGAFENVNITFVSCNEL 468

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           HS+++T  GELY +G+ S   LG   +  K   +P KV+  +    K  + G E ++A+ 
Sbjct: 469 HSASVTESGELYTFGR-SGPHLGYTTEDRKQ-AVPRKVDFSTANKIKAVSCGLEFTIALN 526

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ S+G    G+LG G  + I           P LIK L GV++   + G  H   +
Sbjct: 527 SEGELYSFGKNDCGQLGAGHFNDI---------EEPYLIKHLNGVRISKVSCGSKHVGAV 577

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
             NG V+++G     ++   +      P       ++EE+    CGG HT VL+  G +Y
Sbjct: 578 TVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVY 637

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            +G+ ++G LG+    V  +   +  P   S  +   T I  V CG +HTAA++E G + 
Sbjct: 638 VFGNGQSGQLGVA---VNQTSPYITNPCILSMPNN--TKIAKVDCGIEHTAAVTESGCLY 692

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           TWG G            S G+LGHG+  D   PT+V      +   ++CG  HT A
Sbjct: 693 TWGNG------------SRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAA 736



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 141/342 (41%), Gaps = 84/342 (24%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++Y WG +  G LG G++  ++ P    VE L G   +  A G E ++AV+  G++ SWG
Sbjct: 374 DIYTWGASPKGVLGHGEETEELFP--RVVEALLGRDIRTVACGTEHTLAVSVNGEMFSWG 431

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G  G+LG     +IL        Y P  I   E V +   +   LHSA + E+G +Y F
Sbjct: 432 CGRGGKLGL---KNIL------DRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTF 482

Query: 263 GDRAVDKMLFQEGNH------ARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGELYT 311
           G         + G H       R+ ++  K+ +S     + V CG   T  L S GELY+
Sbjct: 483 G---------RSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYS 533

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILT 370
           +G N+ G LG G  + +  P  ++              I  VSCG KH  A++  G +  
Sbjct: 534 FGKNDCGQLGAGHFNDIEEPYLIKHLNG--------VRISKVSCGSKHVGAVTVNGDVWL 585

Query: 371 WG-------------------------W---------GGSH-------GTFSEDGHSSGG 389
           WG                         W         GGSH       G     G+   G
Sbjct: 586 WGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSG 645

Query: 390 QLGHG--NDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 428
           QLG        YI +P I++   N K  +V CG  HT A+ E
Sbjct: 646 QLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTE 687



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 27/247 (10%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQIS 129
           + +KA++CG   T+ L   G +Y+ G ND GQLG + +     EP  I  L    + ++S
Sbjct: 510 NKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLG-AGHFNDIEEPYLIKHLNGVRISKVS 568

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGF 186
            G  H  A+TV+G++++WG N  GQLG  K  A  IP     E  S  + ++      G 
Sbjct: 569 CGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPF----EAPSTFWNEEIQDIKCGG 624

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVKVKIAA 244
             +V ++  G V  +G G SG+LG          +  TS Y   P ++      K+    
Sbjct: 625 SHTVVLSCTGVVYVFGNGQSGQLGVA--------VNQTSPYITNPCILSMPNNTKIAKVD 676

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EEVVCGGYHT 300
            G  H+A + E+G +Y +G+ +  ++    G+H  R  P+L+  L Y   + + CG YHT
Sbjct: 677 CGIEHTAAVTESGCLYTWGNGSRGRL--GHGDHQDRYVPTLVESLAYKQVQSIACGAYHT 734

Query: 301 --CVLTS 305
             CV+ +
Sbjct: 735 AACVIRA 741



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 42  LWGNGDYGRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           ++GNG  G+LG+   ++      P + S      +  + CG  HT  +TE+GC+Y  G  
Sbjct: 638 VFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNG 697

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
             G+LG  ++    +  L  S   K+V  I+ G +H++A  +
Sbjct: 698 SRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACVI 739


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  135 bits (340), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 57/324 (17%)

Query: 122  KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF-TK 180
            +K  +++S G+ H + I+  GEL+ WGKN +GQLG G    K+   P ++E   G     
Sbjct: 1217 EKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPII 1276

Query: 181  QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
                G E S+ V     V SWG    G+LGHG         +S S+  P++I+++ G K+
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGT--------KSVSQNRPKIIEDISGQKI 1328

Query: 241  KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEE------- 292
            +  AAGF H+  + ++G +Y FG        + +       S +SK +P   E       
Sbjct: 1329 QAIAAGFAHTIVLKKSGELYSFG--------YGDQGQLGHGSFVSKSIPTRIELNTIVGI 1380

Query: 293  ---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
                     + CG  H+ + +  GE+Y+WG  + G LG G+ + +  P  ++        
Sbjct: 1381 QHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEA------- 1433

Query: 344  DQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                  +  +SCG  +T A ++ K + +WG G               +LGHG+D +   P
Sbjct: 1434 ---LKGVTKISCGHFYTMATTDLKNVYSWGLGEHM------------KLGHGSDKNEATP 1478

Query: 403  TIVNFGENVKALQVSCGFNHTGAL 426
             +V+F       ++ CG NHT  L
Sbjct: 1479 RVVDFFIQKNVSKIVCGLNHTITL 1502



 Score =  115 bits (289), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 15/299 (5%)

Query: 69   EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGL--KKEV 125
            EK ++K ++CG  H   ++E+G ++  G N  GQLG   +IG     P R+     K  +
Sbjct: 1217 EKRAIK-VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPI 1275

Query: 126  VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
            + +  G  HS  +  D  +Y WG++  GQLG G K+      P  +E +SG   +  A G
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQ-NRPKIIEDISGQKIQAIAAG 1334

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
            F  ++ +   G++ S+G G  G+LGHG  S +   + +  E    +  +  G K+   A 
Sbjct: 1335 FAHTIVLKKSGELYSFGYGDQGQLGHG--SFVSKSIPTRIELNTIVGIQHGGGKITQIAC 1392

Query: 246  GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
            GF HS    +NG VY +G     ++         RP LI  L    ++ CG ++T   T 
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKISCGHFYTMATTD 1452

Query: 306  GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
               +Y+WG  E+  LG GS D   +  RV   F +  V +I        CG  HT  ++
Sbjct: 1453 LKNVYSWGLGEHMKLGHGS-DKNEATPRVVDFFIQKNVSKIV-------CGLNHTITLT 1503



 Score =  111 bits (278), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 117/432 (27%), Positives = 172/432 (39%), Gaps = 113/432 (26%)

Query: 43   WGNGDYGRLG----LGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGL 97
            WG    G+LG    +G +++   P     F  K  +  + CGG H++ +     VY+ G 
Sbjct: 1242 WGKNQSGQLGHGLDIGKIQTT--PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQ 1299

Query: 98   NDFGQLG-----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
            + FGQLG     +S+N    +E   ISG K  +  I+ G+ H+  +   GELY +G    
Sbjct: 1300 DKFGQLGHGTKSVSQNRPKIIED--ISGQK--IQAIAAGFAHTIVLKKSGELYSFGYGDQ 1355

Query: 153  GQLGLGKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
            GQLG G   +K IP   ++  + GI        Q A GF  SV  +  G+V SWG G  G
Sbjct: 1356 GQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQG 1415

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LGHG   SI           PRLI+ L+GV  KI+   F   A  D    VY +G    
Sbjct: 1416 QLGHGNYESIA---------RPRLIEALKGV-TKISCGHFYTMATTDLKN-VYSWGLGEH 1464

Query: 268  DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGEL---------------- 309
             K+      +   P ++         ++VCG  HT  LT  G+L                
Sbjct: 1465 MKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFID 1524

Query: 310  -------------------------------------YTWGSNENGCLGIGSIDVLHSPE 332
                                                 Y  G+ E+G LG+G         
Sbjct: 1525 LAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGG-------- 1576

Query: 333  RVQGPFSESPVDQI-----CTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 386
             ++ PF + P+          +++ +SCG   TA I S G +  WG+G            
Sbjct: 1577 DLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYG------------ 1624

Query: 387  SGGQLGHGNDVD 398
            + GQ+G+G   D
Sbjct: 1625 NFGQIGNGKTDD 1636



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 58/183 (31%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL----- 97
            WG G++ +LG GS ++   P V   F + ++  + CG  HT+ LT  G +    L     
Sbjct: 1459 WGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDD 1518

Query: 98   -NDF-------------------------GQLGISEN------------------IGYSL 113
             NDF                         G+LG++EN                  +G  L
Sbjct: 1519 VNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDL 1578

Query: 114  E--------PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
            +        P  I G+    ++ IS G   ++ IT +G LY+WG  + GQ+G GK     
Sbjct: 1579 KSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAW 1638

Query: 165  IPI 167
            +PI
Sbjct: 1639 VPI 1641


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 43/355 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GSL+ +  PV   A+   ++ A+  G  H+L +   G V+  G N+FGQ
Sbjct: 72  WGDNAYGQLGNGSLQDQRVPV--RAWGLWNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQ 129

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     G    P+++ GL  EVV+++ G+ HS A+  DG ++ WG N  G+LG G    
Sbjct: 130 LGDGTTTGRQ-APVQVPGL-GEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQ 187

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P+  +V+ L  I  K  A G   S+A+ G G+V +WG+  +G+LG     +  G+  
Sbjct: 188 RLMPV--QVQGLPTI--KAIAAGNAHSLALDGTGRVWAWGSNSNGQLG----DTTAGY-- 237

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P L+  L        +AG  HS     +G  +++G     ++          P 
Sbjct: 238 ---RMLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQ 292

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L   + V+    H+ VL S G ++TWGSN+ G LG G+ +    P +V G      
Sbjct: 293 QVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMG------ 346

Query: 343 VDQICTSIVLVSCG-WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                + +V V+ G  +H+ A+ + G++ TW            GH+  GQLG G+
Sbjct: 347 ----LSGVVAVAAGSGQHSVAVMANGEVWTW------------GHNVEGQLGEGS 385



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 160/364 (43%), Gaps = 41/364 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   GRLG G+   R  PV        ++KA+A G AH+L L  TG V+A G N  GQ
Sbjct: 172 WGSNGAGRLGDGTTTQRLMPVQVQGLP--TIKAIAAGNAHSLALDGTGRVWAWGSNSNGQ 229

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     GY + P  + GL      +S G +HS     DG  ++WG N+ GQLG G   +
Sbjct: 230 LG-DTTAGYRMLPALVPGL-TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTS 287

Query: 163 KVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +  P     + +SG+      LG E  S+ +   G V +WG+   G+LG G +   L   
Sbjct: 288 RSAP-----QQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRL--- 339

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  L GV V +AA    HS  +  NG V+ +G     ++     +++  P
Sbjct: 340 ------VPVQVMGLSGV-VAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVP 392

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
                L     V  G YH       G ++ WG N  G LG G+      P +V G     
Sbjct: 393 KRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPG----- 447

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                 T++V V+ G  H++   +     W W          G ++ GQLG+G+  D  +
Sbjct: 448 -----LTNMVAVAAG-HHSSLALKADGTVWAW----------GDNANGQLGNGSTTDRSN 491

Query: 402 PTIV 405
           PT V
Sbjct: 492 PTQV 495



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 131/271 (48%), Gaps = 17/271 (6%)

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
           +A     L  +A G  HTL +   G V+A G N +GQLG + ++     P+R  GL   +
Sbjct: 43  AAETASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLG-NGSLQDQRVPVRAWGLWN-I 100

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             +  G  HS A+  DG ++ WG N+ GQLG G    +  P+  +V  L  +   + A G
Sbjct: 101 SAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPV--QVPGLGEVV--RVAAG 156

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
           F  S+A+   G V +WG+ G+GRLG G          +T    P  ++ L    +K  AA
Sbjct: 157 FSHSLALKTDGTVWAWGSNGAGRLGDGT---------TTQRLMPVQVQGLP--TIKAIAA 205

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G  HS  +D  GRV+ +G  +  ++      +   P+L+  L  +  +  G  H+ V  +
Sbjct: 206 GNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQA 265

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            G  + WG+N  G LG G+     +P++V G
Sbjct: 266 DGTTWVWGANTYGQLGDGTTTSRSAPQQVSG 296



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 171/416 (41%), Gaps = 93/416 (22%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG   YG+LG G+  SR  P   S      +  +     H+L L   G V+  G N  G
Sbjct: 271 VWGANTYGQLGDGTTTSRSAPQQVSGLA--GVDGVLGAELHSLVLKSDGTVWTWGSNQRG 328

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG        L P+++ GL   V   +    HS A+  +GE++ WG N  GQLG G  +
Sbjct: 329 QLGDGTQE-QRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSS 387

Query: 162 AKVIP------------------------------------------------IPTKVEC 173
              +P                                                +PT+V  
Sbjct: 388 YSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPG 447

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L+ +     A G   S+A+   G V +WG   +G+LG+G          +T    P  + 
Sbjct: 448 LTNMVA--VAAGHHSSLALKADGTVWAWGDNANGQLGNGS---------TTDRSNPTQVP 496

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
            L GV V I AAG  H+  +  +G ++ +GD    ++   +G    RP + +++P    V
Sbjct: 497 GLTGV-VSI-AAGPGHALAVKADGTLWTWGDNNTGQL--GDGTTVDRP-IPTQVPGVTGV 551

Query: 294 V---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
           V    G YH+ V+   G ++ WGSN  G LG G+  +   P       S++P     T +
Sbjct: 552 VSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVP-------SQTP---NLTGV 601

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           V ++ G  H+ A+ ++G +  W            G++  GQLG+GN      PT V
Sbjct: 602 VAITAGLYHSLALKTDGTVWAW------------GYNLHGQLGNGNTTTQQVPTQV 645



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + A+  G  H+L L   G V+A G N  GQ
Sbjct: 573 WGSNYEGQLGGGTTTIR--PVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQ 630

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + N      P ++ G     V +  G +HS AI  DG ++ WG N  GQLG G   +
Sbjct: 631 LG-NGNTTTQQVPTQVPGFSGG-VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTS 688

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    PT+V   +G+     A G   SVA+   G   +WG+   G+LG G          
Sbjct: 689 RT--TPTQVAGFTGV--SFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGS--------- 735

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +   Y P L +    V  +  AAG   +A    +G V+ +GD    ++        R P+
Sbjct: 736 ARWHYAPTLSRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPA 792

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L   E +  G  H  V+   G ++TWG+N  G LG G+      P +V G      
Sbjct: 793 QVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPG------ 846

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                T +V V+ G+ H+ A+ ++G +  WGWG       E+ +   GQLG G     + 
Sbjct: 847 ----LTGVVAVAAGYAHSLALKADGTV--WGWG-------ENIY---GQLGDGTTTQRVA 890

Query: 402 PT 403
           PT
Sbjct: 891 PT 892



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 162/379 (42%), Gaps = 45/379 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG GS   R  P          + ++A G  H L +   G ++  G N+ GQ
Sbjct: 473 WGDNANGQLGNGSTTDRSNPTQVPGLT--GVVSIAAGPGHALAVKADGTLWTWGDNNTGQ 530

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   + P ++ G+   VV ++ G +HS  + VDG ++ WG N  GQLG G    
Sbjct: 531 LGDGTTVDRPI-PTQVPGVTG-VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTI 588

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+P++   L+G+    A  G   S+A+   G V +WG    G+LG+G          
Sbjct: 589 R--PVPSQTPNLTGVVAITA--GLYHSLALKTDGTVWAWGYNLHGQLGNGN--------- 635

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T++  P  +    G  V +  AG  HS  I  +G V+ +G     ++          P+
Sbjct: 636 TTTQQVPTQVPGFSG-GVSL-GAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPT 693

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP--ERVQGPFSE 340
            ++       +  G +H+  L + G  + WGSN+ G LG GS    ++P   R+ G    
Sbjct: 694 QVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGL 753

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
           +  D+               A  S+G +  W            G ++ GQLG G  +   
Sbjct: 754 AAGDRFT------------AARKSDGTVWAW------------GDNTYGQLGDGTTLATR 789

Query: 401 HPTIVNFGENVKALQVSCG 419
            P  V+   +V+ L    G
Sbjct: 790 SPAQVSGLTDVEGLAAGEG 808



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 40/363 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  YG+LG G+  +   P   S      ++ LA G  H + +   G V+  G N  GQ
Sbjct: 772  WGDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLAAGEGHVVVVKMDGTVWTWGNNAKGQ 829

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P ++ GL   VV ++ GY HS A+  DG ++ WG+N  GQLG G    
Sbjct: 830  LGDGTTT-RRLVPTQVPGLTG-VVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQ 887

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +V   PT+ + L+ + +   A G    +A    G + +WG    G+LG G          
Sbjct: 888  RV--APTQAQGLTVVLSM--ASGTYHGLARKADGTLWAWGYNAHGQLGIGT--------- 934

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +T+   P L+  L GV V ++A    HS  +  +G V+ +G  +  ++          P+
Sbjct: 935  TTTRLAPTLVPSLSGV-VSLSAT-HQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPT 992

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
                L   + V  G  ++  + + G +++WG N+ G LG G+     +P +V G  S + 
Sbjct: 993  QAPSLSSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQVAGLNSVTL 1052

Query: 343  VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
            +       ++VS                       GT    G +  GQLG G+ +  + P
Sbjct: 1053 LLAARAHALVVSA---------------------DGTMRGFGDNEAGQLGAGDTLIRLAP 1091

Query: 403  TIV 405
              V
Sbjct: 1092 NQV 1094



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 165/385 (42%), Gaps = 51/385 (13%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  SR  P   + F   S   LA G  H++ L   G  +A G ND GQ
Sbjct: 673  WGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF--LAAGEFHSVALRTDGTAWAWGSNDKGQ 730

Query: 103  LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG  S    Y+    R+ G +     ++ G   ++A   DG ++ WG N+ GQLG G   
Sbjct: 731  LGDGSARWHYAPTLSRLVGARG----LAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTL 786

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            A     P +V  L+ +  +  A G    V V   G V +WG    G+LG G         
Sbjct: 787  A--TRSPAQVSGLTDV--EGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGT-------- 834

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             +T    P  +  L GV     AAG+ HS  +  +G V+ +G+    ++   +G   +R 
Sbjct: 835  -TTRRLVPTQVPGLTGVVA--VAAGYAHSLALKADGTVWGWGENIYGQL--GDGTTTQRV 889

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P+    L     +  G YH     + G L+ WG N +G LGIG+     +P  V     
Sbjct: 890  APTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPS--- 946

Query: 340  ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                    + +V +S   +H+ A+  +G +  WG            ++S GQLG G    
Sbjct: 947  -------LSGVVSLSATHQHSLALKPDGTVWAWG------------YNSNGQLGDGTTTT 987

Query: 399  YIHPTIVNFGENVKALQVSCGFNHT 423
               PT      +VKA  VS GF ++
Sbjct: 988  RHVPTQAPSLSSVKA--VSAGFEYS 1010



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 25/189 (13%)

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
           ++ + AAG  H+  +  +G V+ +GD A  ++        R P     L     V  G  
Sbjct: 49  RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAVGAGDL 108

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  + S G ++TWG N  G LG G+     +P +V G             +V V+ G+ 
Sbjct: 109 HSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPG----------LGEVVRVAAGFS 158

Query: 359 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           H+ A+ ++G +  WG  G+            G+LG G     + P  V     +KA  ++
Sbjct: 159 HSLALKTDGTVWAWGSNGA------------GRLGDGTTTQRLMPVQVQGLPTIKA--IA 204

Query: 418 CGFNHTGAL 426
            G  H+ AL
Sbjct: 205 AGNAHSLAL 213


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 189/414 (45%), Gaps = 61/414 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
           +G  D G+LG G+   + RP      V  S F K         + A++CG  HT+ LT +
Sbjct: 15  FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYM 146
           G VY+ G    GQLG  +    ++ P +I+  ++E   V  +S G  HS+A+T DG LYM
Sbjct: 72  GAVYSWGWGSMGQLGHGDLKSINV-PQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130

Query: 147 WGKNSNGQLGLGKK-AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKVLSWG 202
           WG+   GQLGL K+  A     P K   L G+  +   + + G   + A+T  G+V  WG
Sbjct: 131 WGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWG 190

Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G SG+LG G        ++ +LG  R      P L++   G KV   A G  HSA + E
Sbjct: 191 RGDSGQLGIGSAWLKDTDDNGLLGVSR------PHLVEGFNGEKVVQVACGAFHSAAVTE 244

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTW 312
            G VYI+G      +   + +  + P  +     +P +  V CGG+HT V+   G+ Y +
Sbjct: 245 QGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIP-ALRVSCGGWHTMVVAKSGDCYAF 303

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G  E G LG+G       P  V+    +        +++  +CG  HT  ++        
Sbjct: 304 GRGEYGRLGLGDTKSRTRPHLVKALKGQ--------TVIQAACGGSHTLFVT-------- 347

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              S G     G    G+LG  +      PT ++ G  +   QVS G  H+ AL
Sbjct: 348 ---SDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGP-IPVRQVSAGGAHSMAL 397



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 156/360 (43%), Gaps = 56/360 (15%)

Query: 92  VYATGLNDFGQLGIS---------ENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVD 141
           V A G ND GQLG           +++  S  P ++ GL  +E+V +S G  H+ A+T  
Sbjct: 12  VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKVL 199
           G +Y WG  S GQLG G    K I +P K+      G+     + G   S AVT  G + 
Sbjct: 72  GAVYSWGWGSMGQLGHGD--LKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLY 129

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAAGFLHSACIDE 255
            WG    G+LG  +E        +  E  P     LEGV     VK++  G  H+A +  
Sbjct: 130 MWGETHWGQLGLPKE------FEAAHESFPVKCPLLEGVADESVVKVSCGG-THTAALTN 182

Query: 256 NGRVYIFG-----DRAVDKMLFQEGNH-----ARRPSLISKLPYSE--EVVCGGYHTCVL 303
            GRVY++G        +     ++ +        RP L+      +  +V CG +H+  +
Sbjct: 183 LGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAV 242

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           T  G +Y WG  + G LG+G      +P+RV+  F + P        + VSCG  HT  +
Sbjct: 243 TEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEF-FDDIPA-------LRVSCGGWHTMVV 294

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           ++            G     G    G+LG G+      P +V   +    +Q +CG +HT
Sbjct: 295 AKS-----------GDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHT 343



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 129/281 (45%), Gaps = 30/281 (10%)

Query: 42  LWGNGDYGRLGLG-SLESRWR--PVVCSAFE---KHSLKALACGGAHTLFLTETGCVYAT 95
           +WG   +G+LGL    E+     PV C   E     S+  ++CGG HT  LT  G VY  
Sbjct: 130 MWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVW 189

Query: 96  GLNDFGQLGI--------SEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
           G  D GQLGI         +N  +G S  P  + G   E VVQ++ G  HS+A+T  G +
Sbjct: 190 GRGDSGQLGIGSAWLKDTDDNGLLGVS-RPHLVEGFNGEKVVQVACGAFHSAAVTEQGHV 248

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y+WGK   G LG+G+ + +    P +VE    I   + + G   ++ V   G   ++G G
Sbjct: 249 YIWGKEDYGMLGVGQTSDQ--QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRG 306

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             GRLG G          + S   P L+K L+G  V  AA G  H+  +  +G  Y+ G 
Sbjct: 307 EYGRLGLGD---------TKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGR 357

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
               ++   +      P+ +   P    +V  GG H+  LT
Sbjct: 358 PDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSMALT 398


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 174/385 (45%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV  S      + AL+   ++TL L   G V+A G N +GQ
Sbjct: 220 WGSNFSGQLGDGTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQ 277

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   VV +S GY HS A+  DG ++ WG N NGQLG G    
Sbjct: 278 LGDGTTT-PRLSPVQVPGLTN-VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ 335

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP  V  L  +    A  G+  S+A+   G V +WG    G+LG G          
Sbjct: 336 RSPSIP--VFGLIDVVALSA--GYSHSLALRTDGTVWAWGYNSLGQLGDG---------- 381

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+   P  ++  +   V   +AG  HS  +  +G V  +G     ++      H   P 
Sbjct: 382 -TTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPV 440

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  GG HT  L + G ++ WGSN +G LG G+     SP ++ G      
Sbjct: 441 QVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLG------ 494

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                T++V +S G+ H+ A+ ++G +  WG             +S GQLG G     + 
Sbjct: 495 ----LTNVVALSAGYYHSLAVHTDGTVWAWG------------SNSDGQLGDGTTTHRLT 538

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V    +V AL  S G +H+ AL
Sbjct: 539 PVQVPGLTDVVAL--SAGDSHSLAL 561



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 174/357 (48%), Gaps = 52/357 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G +H+L L   G V+A G N  GQLG          P+++ GL  +VV +S G HH 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG-SPVQVPGLT-DVVALSAGNHHC 58

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG NS+GQLG G    ++  +  +V  L+ +    A  G   ++A+   
Sbjct: 59  LALRTDGTVWAWGSNSSGQLGDGTTTPRLSSV--QVPGLTDVVALSA--GSSYTLALRTD 114

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIA-AAGFLHSACI 253
           G V +WG    G+LG G               TPRL   ++ G+   +A ++G  HS  +
Sbjct: 115 GTVWAWGYNFYGQLGDGTT-------------TPRLAPVQVPGLTDVVALSSGIYHSLAL 161

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
             +G V+ +GD A  ++   +G   RR S + ++P   +VV    GGYH+  + + G ++
Sbjct: 162 RTDGTVWAWGDNASGQL--GDGTATRRLSPV-QVPGLTDVVALSAGGYHSLAVRTDGTVW 218

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
            WGSN +G LG G+     SP +V G           T++V +S    +T A+ ++G + 
Sbjct: 219 AWGSNFSGQLGDGTATPRLSPVQVSG----------LTNVVALSADDSYTLALRTDGTVW 268

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            W            G++S GQLG G     + P  V    NV AL  S G++H+ AL
Sbjct: 269 AW------------GYNSYGQLGDGTTTPRLSPVQVPGLTNVVAL--SAGYSHSLAL 311



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 180/387 (46%), Gaps = 48/387 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + AL+ GG H+L +   G V+A G N  GQ
Sbjct: 170 WGDNASGQLGDGTATRRLSPVQVPGLTD--VVALSAGGYHSLAVRTDGTVWAWGSNFSGQ 227

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++SGL   VV +S    ++ A+  DG ++ WG NS GQLG G    
Sbjct: 228 LGDGTAT-PRLSPVQVSGLTN-VVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTP 285

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +    A  G+  S+A+   G V +WG   +G+LG+G  +      R
Sbjct: 286 RLSPV--QVPGLTNVVALSA--GYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ-----R 336

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S S      I     + V   +AG+ HS  +  +G V+ +G  ++ ++   +G    RPS
Sbjct: 337 SPS------IPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQL--GDGTTIPRPS 388

Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + ++P   +VV    G  H+  L + G +  WG N +G LG G+     SP +V     
Sbjct: 389 PV-QVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPD--- 444

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                   T +V +S G  HT A+     + W WG           +S GQLG G     
Sbjct: 445 -------LTDVVALSAGGNHTLALRTNGTV-WAWG----------SNSDGQLGDGTTTPR 486

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
           + P  +    NV AL  S G+ H+ A+
Sbjct: 487 LSPVQMLGLTNVVAL--SAGYYHSLAV 511



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 174/405 (42%), Gaps = 72/405 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+   R  PV         + AL+ G +H+L L   G V+A G N  GQ
Sbjct: 270 WGYNSYGQLGDGTTTPRLSPVQVPGLTN--VVALSAGYSHSLALRTDGTVWAWGYNYNGQ 327

Query: 103 LGISENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    I     P + + GL  +VV +S GY HS A+  DG ++ WG NS GQLG G   
Sbjct: 328 LG--NGIPTQRSPSIPVFGLI-DVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTI 384

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P P +V  L+ +    A  G   S+A+   G V +WG   SG+LG G  +  L  +
Sbjct: 385 PR--PSPVQVPDLTDVVALSA--GDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPV 440

Query: 222 R------------------------------STSE-------YTPRL--IKELEGVKVKI 242
           +                              S S+        TPRL  ++ L    V  
Sbjct: 441 QVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLGLTNVVA 500

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            +AG+ HS  +  +G V+ +G  +  ++      H   P  +  L     +  G  H+  
Sbjct: 501 LSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDVVALSAGDSHSLA 560

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           L + G ++ WGSN +  LG G+     SP +V G           T +V +S G  H+ A
Sbjct: 561 LRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPG----------LTDVVALSAGGAHSLA 610

Query: 363 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
           + ++G +  W WG ++           GQLG G     + P +V+
Sbjct: 611 LRTDGTV--WAWGSNY----------YGQLGDGTTTPRLFPVLVS 643



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 187/390 (47%), Gaps = 54/390 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R   V         + AL+ G ++TL L   G V+A G N +GQ
Sbjct: 70  WGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALSAGSSYTLALRTDGTVWAWGYNFYGQ 127

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL  +VV +S+G +HS A+  DG ++ WG N++GQLG G    
Sbjct: 128 LGDGTTT-PRLAPVQVPGLT-DVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATR 185

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +    A  G   S+AV   G V +WG+  SG+LG G          
Sbjct: 186 RLSPV--QVPGLTDVVALSA--GGYHSLAVRTDGTVWAWGSNFSGQLGDGTA-------- 233

Query: 223 STSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                TPRL   ++ G+   +A +A   ++  +  +G V+ +G  +  ++   +G    R
Sbjct: 234 -----TPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQL--GDGTTTPR 286

Query: 281 PSLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            S + ++P    VV    GY H+  L + G ++ WG N NG LG G I    SP      
Sbjct: 287 LSPV-QVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG-IPTQRSPSI---- 340

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
               PV  +   +V +S G+ H+ A+ ++G +  W            G++S GQLG G  
Sbjct: 341 ----PVFGLI-DVVALSAGYSHSLALRTDGTVWAW------------GYNSLGQLGDGTT 383

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +    P+ V   +    + +S G +H+ AL
Sbjct: 384 IP--RPSPVQVPDLTDVVALSAGDSHSLAL 411



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + AL+ G  H L L   G V+A G N  GQ
Sbjct: 20  WGSNSSGQLGDGTTTPRGSPVQVPGLTD--VVALSAGNHHCLALRTDGTVWAWGSNSSGQ 77

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L  +++ GL  +VV +S G  ++ A+  DG ++ WG N  GQLG G    
Sbjct: 78  LGDGTTT-PRLSSVQVPGL-TDVVALSAGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTP 135

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +    +  G   S+A+   G V +WG   SG+LG G          
Sbjct: 136 RLAPV--QVPGLTDVVALSS--GIYHSLALRTDGTVWAWGDNASGQLGDGT--------- 182

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   +P  +  L  V V ++A G+ HS  +  +G V+ +G     ++          P 
Sbjct: 183 ATRRLSPVQVPGLTDV-VALSAGGY-HSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPV 240

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +     +T  L + G ++ WG N  G LG G+     SP +V G      
Sbjct: 241 QVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPG------ 294

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                T++V +S G+ H+ A+ ++G +  W            G++  GQLG+G       
Sbjct: 295 ----LTNVVALSAGYSHSLALRTDGTVWAW------------GYNYNGQLGNGIPTQR-S 337

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P+I  FG  +  + +S G++H+ AL
Sbjct: 338 PSIPVFGL-IDVVALSAGYSHSLAL 361



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 138/294 (46%), Gaps = 23/294 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV         + AL+ GG HTL L   G V+A G N  GQ
Sbjct: 420 WGVNYSGQLGDGTTTHRLSPVQVPDLTD--VVALSAGGNHTLALRTNGTVWAWGSNSDGQ 477

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   VV +S GY+HS A+  DG ++ WG NS+GQLG G    
Sbjct: 478 LGDGTTT-PRLSPVQMLGLTN-VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTH 535

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +    A  G   S+A+   G V +WG+  S +LG G          
Sbjct: 536 RLTPV--QVPGLTDVVALSA--GDSHSLALRTDGTVWAWGSNSSSQLGDGT--------- 582

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +T   +P  +  L    V   +AG  HS  +  +G V+ +G     ++   +G    R  
Sbjct: 583 TTPRGSPVQVPGL--TDVVALSAGGAHSLALRTDGTVWAWGSNYYGQL--GDGTTTPRLF 638

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           P L+S L  +  +  G  H+  L + G    WG+N  G LG G+      P +V
Sbjct: 639 PVLVSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 169/366 (46%), Gaps = 46/366 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV         + AL+ G +H+L L   G V A G+N  GQ
Sbjct: 370 WGYNSLGQLGDGTTIPRPSPVQVPDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQ 427

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + L P+++  L  +VV +S G +H+ A+  +G ++ WG NS+GQLG G    
Sbjct: 428 LGDGTTT-HRLSPVQVPDL-TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTP 485

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  ++  L+ +    A  G+  S+AV   G V +WG+   G+LG G          
Sbjct: 486 RLSPV--QMLGLTNVVALSA--GYYHSLAVHTDGTVWAWGSNSDGQLGDGT--------- 532

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   TP  +  L    V   +AG  HS  +  +G V+ +G  +  ++   +G    R S
Sbjct: 533 TTHRLTPVQVPGL--TDVVALSAGDSHSLALRTDGTVWAWGSNSSSQL--GDGTTTPRGS 588

Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + ++P   +VV    GG H+  L + G ++ WGSN  G LG G+      P  V     
Sbjct: 589 PV-QVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVS---- 643

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
               +   TS +    G  H+ A+            + GT    G++ GGQLG G    +
Sbjct: 644 ----NLTGTSNLYAGAG--HSLALR-----------TDGTGRAWGNNYGGQLGDGTSAFF 686

Query: 400 IHPTIV 405
           +HP  V
Sbjct: 687 LHPVQV 692


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 157/306 (51%), Gaps = 28/306 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2736

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 2737 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2795

Query: 160  KAAKVIPIPTKVECLSGIFTKQA-------ALGFEQSVAV-TGGGKVLSWGAGGSGRLGH 211
             + K   +P +V  L G    QA       A G   ++AV T G  V ++G G  G+LG 
Sbjct: 2796 TSNK--KLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGL 2853

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKM 270
            G          ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +   
Sbjct: 2854 GN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 2904

Query: 271  LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              +  NH  RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +
Sbjct: 2905 EGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 2963

Query: 329  HSPERV 334
              P  V
Sbjct: 2964 REPTLV 2969



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 21/254 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 2731 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2790

Query: 103  LGISENIGYSLEPLRISGLK--------KEVVQISTGYHHSSAITVDGEL-YMWGKNSNG 153
            LG+       L P R++ L+         +   ++ G +H+ A++ DG + + +G    G
Sbjct: 2791 LGLGNTSNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYG 2849

Query: 154  QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
            +LGLG   AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G 
Sbjct: 2850 KLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG- 2906

Query: 214  ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++   
Sbjct: 2907 --------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2958

Query: 274  EGNHARRPSLISKL 287
              NH R P+L++ L
Sbjct: 2959 HTNHVREPTLVTVL 2972



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 174/403 (43%), Gaps = 58/403 (14%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 2626 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 2682

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 2683 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 2741

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 2742 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 2798

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIA-------AAGFLHSACIDENGR-VYIFGDRAVDK 269
                    +  P  +  LEG ++  A       A G  H+  +  +G  V+ FGD    K
Sbjct: 2799 --------KKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGK 2850

Query: 270  MLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            +          P  +  L     ++V CG   +  LT  G +YT+G +    L  G    
Sbjct: 2851 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 2910

Query: 328  LHSPERVQGPFSESPVDQICTSIVL--VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 384
             + P++V           +   +V+  V+ G +HT A+ S G +  WG            
Sbjct: 2911 HNRPQQVP----------VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------ 2948

Query: 385  HSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
             +S GQLG G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 2949 SNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 2989



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 32/315 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++++WG   +GQL    +A + + +P      S  
Sbjct: 2598 INGMDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2653

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 2654 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2703

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 2704 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2762

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + Q      
Sbjct: 2763 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSY 2821

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 2822 SVACGLNHTLAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 2871

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 2872 GIKKVACGTQFSVAL 2886


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  H+ A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGL-MTTEDAVAVPRVIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G   S+A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   ++A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PR+I++L    +   + G  HS  +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  H+  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P +I KL      +V CG +H+  L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  E +V ++ G  HS A++  G+L+ WG  S+GQLGL     + + +P  ++ L+    
Sbjct: 81  LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEESVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRAQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G  HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T E    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRAQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G + SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L         P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 195/417 (46%), Gaps = 65/417 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
           +G  D G+LG G+   + RP      V  S F +         + A++CG  HT+ LT +
Sbjct: 11  FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
           G VY+ G    GQLG   ++    EP +I+  ++E ++   IS G  HS+A+T DG LY+
Sbjct: 68  GAVYSWGWGSMGQLG-HGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYV 126

Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           WG++  GQLGL K+   A + +P+   + E  +G    + + G   + A+T  G+V  WG
Sbjct: 127 WGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWG 186

Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G SG+LG G       +  S++G  R      P L+K   G KV   A G  HSA + E
Sbjct: 187 RGDSGQLGIGSVWMKDPENESLMGASR------PHLLKAFNGEKVVQVACGAFHSAAVTE 240

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELY 310
            G VY++G      +   + +  + P    +L Y ++     V CGG+HT V+   G+ Y
Sbjct: 241 QGHVYVWGKEDYGMLGVGQSSDQQIP---KRLEYFDDIPVLRVSCGGWHTVVVAKSGDCY 297

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            +G  E G LG+G       P  V+    +        +++  +CG  HT  ++      
Sbjct: 298 AFGRGEYGRLGLGDTKSRTRPHLVKALKGK--------TVIQAACGGSHTLFVT------ 343

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                S GT    G    G+LG  +      PT ++ G  +   Q S G  H+ AL+
Sbjct: 344 -----SDGTAYVAGRPDHGRLGLADMKALGVPTRLDLGP-IPVRQFSAGGAHSVALM 394



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 115/240 (47%), Gaps = 31/240 (12%)

Query: 42  LWGNGDYGRLGL-----GSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVY 93
           +WG   +G+LGL      + ES   PV C   E     ++  ++CGG HT  LT  G VY
Sbjct: 126 VWGESHWGQLGLPKEYEAAHESL--PVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVY 183

Query: 94  ATGLNDFGQLGI---------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGE 143
             G  D GQLGI         +E++  +  P  +     E VVQ++ G  HS+A+T  G 
Sbjct: 184 VWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGH 243

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y+WGK   G LG+G+ + +   IP ++E    I   + + G   +V V   G   ++G 
Sbjct: 244 VYVWGKEDYGMLGVGQSSDQ--QIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGR 301

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLG G          + S   P L+K L+G  V  AA G  H+  +  +G  Y+ G
Sbjct: 302 GEYGRLGLGD---------TKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAG 352



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG  DYG LG+G    +  P     F+   +  ++CGG HT+ + ++G  YA G  ++G
Sbjct: 246 VWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYG 305

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG+ +    +  P  +  LK K V+Q + G  H+  +T DG  Y+ G+  +G+LGL   
Sbjct: 306 RLGLGDTKSRT-RPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLAD- 363

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             K + +PT+++ L  I  +Q + G   SVA+
Sbjct: 364 -MKALGVPTRLD-LGPIPVRQFSAGGAHSVAL 393



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 31/160 (19%)

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I  LP  E++V   CG  HT  LTS G +Y+WG    G LG G + +++ P+++   
Sbjct: 40  PQQIGNLP-DEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIA-- 96

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
           F E    Q    +  +SCG  H+AA+++   L + WG SH           GQLG   + 
Sbjct: 97  FFE----QERLEVDYISCGGCHSAAVTKDGTL-YVWGESHW----------GQLGLPKEY 141

Query: 398 DYIHPTIV--------NFGENVKALQVSCGFNHTGALLEY 429
           +  H ++           GE +  ++VSCG  HT AL  +
Sbjct: 142 EAAHESLPVKCPMPEGEAGETI--VKVSCGGTHTAALTSF 179


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 168/325 (51%), Gaps = 30/325 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +GN ++G+LG+GS ++R +P    A +   +  +A G  HTL +T++  +Y+ G    G 
Sbjct: 59  FGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGA 118

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    ++ P  I  L+ K+V  I+ G +HS+AIT +GELY+WG NS GQLGL    
Sbjct: 119 LGHGDETDLNM-PTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL---K 174

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              I  PT ++    + +   A G+  +  VT  GK+ ++G    G+LG       LG +
Sbjct: 175 NDTISYPTMLDLGKSVIS--VACGYYHTAVVTADGKLYTFGETEGGKLG-------LGDI 225

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
            +     P+++K + G  VK+A  G  H+  +  +G+VY FG     ++ L  +   +  
Sbjct: 226 EAHKVTKPKVVKGISGKVVKVACGGN-HTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI 284

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQG 336
           P L+  L     + + CG  HT V++  GEL+T+G   +G LG G  S   L  P +VQ 
Sbjct: 285 PKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQ- 343

Query: 337 PFSESPVDQICTSIVL-VSCGWKHT 360
                   ++   IVL ++CG  HT
Sbjct: 344 --------RLKEFIVLHIACGGCHT 360



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 178/355 (50%), Gaps = 41/355 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           +ACG  HT+ +TE G ++  G N++GQLGI  N   + +P  +  LK E +  ++ G  H
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRN-KPTTVKALKPEKITHVAAGRFH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           + A+T   +LY +G+ S G LG G +    + +PT +E L        A G   S A+T 
Sbjct: 99  TLAVTDSNKLYSFGQGSEGALGHGDETD--LNMPTSIESLEDKDVNIIACGGYHSAAITK 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++  WG+   G+LG          L++ +   P ++ +L G  V   A G+ H+A + 
Sbjct: 157 NGELYIWGSNSEGQLG----------LKNDTISYPTML-DL-GKSVISVACGYYHTAVVT 204

Query: 255 ENGRVYIFGDRAVDKMLFQ--EGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
            +G++Y FG+    K+     E +   +P ++  +     +V CGG HT  LT+ G++YT
Sbjct: 205 ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQVYT 264

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILT 370
           +GS +NG LG+GS  +  +  ++    S+  +  I       +CG  HTA +S+ G++ T
Sbjct: 265 FGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHI-------ACGESHTAVVSDKGELFT 317

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNHT 423
           +G  G H           G+LG G++   +   P  V   +    L ++CG  HT
Sbjct: 318 FG-DGRH-----------GKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHT 360



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 163/345 (47%), Gaps = 47/345 (13%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG V+  G + FG    ++    S           +V  I+ G  H+  +T +G L+
Sbjct: 8   IPETGAVFTFGKSRFGDNRTNKFWIRS----------DKVTDIACGDEHTVVVTENGRLF 57

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +G N  GQLG+G  + K    PT V+ L        A G   ++AVT   K+ S+G G 
Sbjct: 58  TFGNNEWGQLGIG--SNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGS 115

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G LGHG E+ +           P  I+ LE   V I A G  HSA I +NG +YI+G  
Sbjct: 116 EGALGHGDETDL---------NMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSN 166

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           + +  L  + +    P+++        V CG YHT V+T+ G+LYT+G  E G LG+G I
Sbjct: 167 S-EGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDI 225

Query: 326 DV--LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 382
           +   +  P+ V+G         I   +V V+CG  HT A++  G++ T+G G        
Sbjct: 226 EAHKVTKPKVVKG---------ISGKVVKVACGGNHTVALTASGQVYTFGSG-------- 268

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 GQLG G+ + D   P +V      K   ++CG +HT  +
Sbjct: 269 ----QNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVV 309



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 38/299 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G G  G LG G       P    + E   +  +ACGG H+  +T+ G +Y  G N  GQ
Sbjct: 111 FGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQ 170

Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ ++ I Y   P  +  L K V+ ++ GY+H++ +T DG+LY +G+   G+LGLG   
Sbjct: 171 LGLKNDTISY---PTMLD-LGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIE 226

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A  +  P  V+ +SG   K  A G   +VA+T  G+V ++G+G +G+LG G  S I+   
Sbjct: 227 AHKVTKPKVVKGISGKVVK-VACGGNHTVALTASGQVYTFGSGQNGQLGLG--SKIM--- 280

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-- 279
                  P+L++ L   K+K  A G  H+A + + G ++ FGD          G H +  
Sbjct: 281 ---DSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGD----------GRHGKLG 327

Query: 280 ----------RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                     +P  + +L       + CGG HT V  +  +    G ++N       +D
Sbjct: 328 QGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNESSSNDEVD 386


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 178/377 (47%), Gaps = 55/377 (14%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRI 118
           + P VCS   +  +  LACG  HT F+ + G +Y  G N  G+LGI  +++  S +P  +
Sbjct: 13  YYPRVCSF--QIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLV 70

Query: 119 SGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           S L K +V+Q+S G+ H+ AI   GEL+ WG +S GQLG+    +   P       L GI
Sbjct: 71  SALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGI 130

Query: 178 --FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
             F    + G+  +VAV   G+V S+G+G  G+LG G ++          +Y P L+  L
Sbjct: 131 NTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQN---------KQYKPFLLNSL 181

Query: 236 -EGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSE- 291
            + +KVK    GF H+  +DE+GRVY  G  D         EGN    P L+ +L +S  
Sbjct: 182 SQIIKVK---CGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGN-ISSPRLVLELEHSFI 237

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-SI 350
           + +  G H+  +T   E+Y +G ++                   G F    + +IC   +
Sbjct: 238 KKIFAGSHSAAITDANEIYFFGKSQ------------------LGQFLYPQLVRICQGDV 279

Query: 351 VLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
             +S G     A++ +GK+ +WG             +  GQLG G+    I P++V    
Sbjct: 280 NEISIGNHFGVAVTYDGKVYSWGI------------NQQGQLGQGDSDVRIIPSLVEPLN 327

Query: 410 NVKALQVSCGFNHTGAL 426
             K +  +CG N+   L
Sbjct: 328 EKKVISATCGENYVICL 344



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 151/308 (49%), Gaps = 31/308 (10%)

Query: 44  GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           G+   G+LG+G  SL++ ++P + SA  K+ +  ++CG +HT  + ++G +++ G +  G
Sbjct: 47  GSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEG 106

Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           QLGI+ N G    P  ++     G+   V  +S GY+H+ A+  +G++  +G    GQLG
Sbjct: 107 QLGINSN-GSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLG 165

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G +  +  P    +  LS I   +   GF  ++ +   G+V S G    G+LG G    
Sbjct: 166 TGNQNKQYKPFL--LNSLSQII--KVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEG 221

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +         +PRL+ ELE   +K   AG  HSA I +   +Y FG   + + L+    
Sbjct: 222 NIS--------SPRLVLELEHSFIKKIFAG-SHSAAITDANEIYFFGKSQLGQFLY---- 268

Query: 277 HARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
               P L+        E+  G +    +T  G++Y+WG N+ G LG G  DV   P  V+
Sbjct: 269 ----PQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVE 324

Query: 336 GPFSESPV 343
            P +E  V
Sbjct: 325 -PLNEKKV 331



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 112/245 (45%), Gaps = 26/245 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+G  G+LG G+   +++P + ++  +  +  + CG  HTLFL E+G VY+ GLND GQ
Sbjct: 156 FGSGKKGQLGTGNQNKQYKPFLLNSLSQ--IIKVKCGFYHTLFLDESGRVYSCGLNDEGQ 213

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N G    P  +  L+   ++      HS+AIT   E+Y +GK+  GQ        
Sbjct: 214 LGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQF------- 266

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P  V    G    + ++G    VAVT  GKV SWG    G+LG G          
Sbjct: 267 ---LYPQLVRICQGD-VNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGD--------- 313

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDRAVDKMLFQEGNHARR 280
           S     P L++ L   KV  A  G  +  C+ +  N R+     +   KML  +      
Sbjct: 314 SDVRIIPSLVEPLNEKKVISATCGENYVICLGQVMNSRLAKLASQK--KMLKFQSPDNNN 371

Query: 281 PSLIS 285
            SLI+
Sbjct: 372 NSLIN 376



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 25/143 (17%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           ++ CG  HT  +   G LYT GSN  G LGIG        + +Q  F    V  +    V
Sbjct: 26  QLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQ-------QSLQNSFQPQLVSALSKYKV 78

Query: 352 L-VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
           + VSCG  HT AI + G++ +WG             SS GQLG  ++  + +P +VNF +
Sbjct: 79  MQVSCGHSHTCAIIDSGELFSWG------------DSSEGQLGINSNGSHYNPQLVNFSD 126

Query: 410 ----NVKALQVSCGFNHTGALLE 428
               N     VSCG+ HT A+L+
Sbjct: 127 LKGINTFVTDVSCGYYHTVAVLK 149


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 185/395 (46%), Gaps = 58/395 (14%)

Query: 55  SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
           SLE +   ++  A E      ++ +ACGG H + +T+ G  ++ G    G+LG  +  N+
Sbjct: 327 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 386

Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            +   P  I  L    ++ ++ G +HS A+T+ G+LY WGK   G LG G + +  +P  
Sbjct: 387 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 443

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
                + GI     A G   +  VT  G++ ++G G  G LGHG   S+         + 
Sbjct: 444 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 493

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
           PR +  L+G++   AA G  H+A + E            +G+++ +GD   DK     G+
Sbjct: 494 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD--GDKSRLGHGD 551

Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
              +  P+ ++ L  P   +V CG   T  LT+ G +YT GS   G LG    D    P 
Sbjct: 552 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPT 610

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
           RV G   +S V++I       +CG  H A + S  ++ TWG G            S G+L
Sbjct: 611 RVDGKLHKSFVEEI-------ACGAYHVAVLTSRTEVYTWGKG------------SNGRL 651

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GHG+  D   PT+V   ++ +   ++CG N T A+
Sbjct: 652 GHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 156/345 (45%), Gaps = 52/345 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +   P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 370 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 429

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G +
Sbjct: 430 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 488

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G   R
Sbjct: 489 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 546

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 547 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 593

Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   NG
Sbjct: 594 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            LG G  D  +SP  V     ES  D+   SI   +CG   TAA+
Sbjct: 650 RLGHGDADDRNSPTLV-----ESLKDKQVKSI---ACGSNFTAAV 686



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 134/312 (42%), Gaps = 59/312 (18%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+          N ++G   +      +P  +E    +  +  A G + +V VT
Sbjct: 303 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 362

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+  SWG    GRLGHG +S++           P+LI  L    +++ A G  HS  +
Sbjct: 363 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 413

Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G    D  +   GN       +R + + +  +   + CG YHT V+TS G+
Sbjct: 414 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 471

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-- 365
           L+T+G    G LG G    +  P           VD +     V  +CG  HTAA+ E  
Sbjct: 472 LFTFGDGTFGVLGHGDRKSVFIPRE---------VDSLKGLRTVRAACGVWHTAAVVEVM 522

Query: 366 -----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
                      GK+ TWG          DG  S  +LGHG+    + PT V         
Sbjct: 523 VGSSSSSNCSSGKLFTWG----------DGDKS--RLGHGDKEPKLVPTCVAALVEPNFC 570

Query: 415 QVSCGFNHTGAL 426
           QV+CG + T AL
Sbjct: 571 QVACGHSLTVAL 582



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 24/206 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ + P LI  L 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG YH+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 397 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 455

Query: 346 ICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
           I       +CG  HTA + S G++ T+G     GTF        G LGHG+      P  
Sbjct: 456 I-------ACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSVFIPRE 496

Query: 405 VNFGENVKALQVSCGFNHTGALLEYV 430
           V+  + ++ ++ +CG  HT A++E +
Sbjct: 497 VDSLKGLRTVRAACGVWHTAAVVEVM 522


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 172/350 (49%), Gaps = 39/350 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  L
Sbjct: 479 PQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGAL 535

Query: 122 KKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
             + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+     
Sbjct: 536 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLIQKLNQQTIL 594

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ +
Sbjct: 595 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIPL 646

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGG 297
              AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG 
Sbjct: 647 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCGE 705

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG 
Sbjct: 706 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACGR 757

Query: 358 KHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 758 QHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 795



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 463 LGQPGISSNLQGIVAEP-QVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 521

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 522 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 571

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 572 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 627

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 628 EFPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 686

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 687 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 726

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 727 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 764



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     ++    K+ A G   SV +   G+V + G    
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 517

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 518 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 566

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 567 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 626

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 627 KEFPSQTSPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 670

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 671 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 711



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 668 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 727

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 728 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 786

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 787 CNVKCPSPVK 796


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A+  S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLALVPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG +HTA +++ G + T+G G            S GQ
Sbjct: 234 CHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGH +  D ++P  V      +  Q++CG  HT AL+
Sbjct: 274 LGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 172/344 (50%), Gaps = 30/344 (8%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLND 99
           WG    G+LG+G  E  +   P +    E  S ++ ++CG  HT FL + G VY  G N+
Sbjct: 4   WGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNE 63

Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           FGQLG  ++      P  +  ++   + +++ G  H+ A++  G ++ WG NS GQ+GLG
Sbjct: 64  FGQLGQEKS---HTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLG 120

Query: 159 KKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            K   KV  IP  ++ L+ +   Q A G   S+A+T  G +  WG   SG+LG G+  S 
Sbjct: 121 SKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHS- 179

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S SE  P L   L GV   + +AG  HS  +  +G ++ +G     ++   +   
Sbjct: 180 -----SMSEPAPVL--SLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTD 232

Query: 278 ARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              P+L+  L  S+    V CG  HT VLTS G ++T+G   +G LG  S    ++P +V
Sbjct: 233 RPLPTLLKSL-RSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKV 291

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGS 376
                    + + + +  ++CG  HT A+  S G++ T+G GG 
Sbjct: 292 --------FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGD 327



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 18/304 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ ++G+LG    +S   P    A E  ++  + CG AHT+ +++ G V+A G N +GQ+
Sbjct: 60  GSNEFGQLG--QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117

Query: 104 GISENIGYSLE--PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+   +   ++  P  + GL K  VVQI+ G +HS A+T+ G L+ WG NS+GQLG+GK 
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKT 177

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            + +   P  V  L+G+     + G   S A++  G +  WG    G+LG          
Sbjct: 178 HSSMSE-PAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD------- 229

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P L+K L    V   + G  H+A +  +G V+ FG     ++     +H   
Sbjct: 230 --TTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT 287

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  + +L  S   ++ CG  HT  L  S G +YT+G   +G LG+G  +  +SP   +GP
Sbjct: 288 PRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGP 347

Query: 338 FSES 341
           +  S
Sbjct: 348 WLRS 351



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 43/293 (14%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++ WGK S GQLG+G+   + I  P  +E L      ++ + G+  +  +   G V + G
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +   G+LG           +  S   P  +  +E   +     G  H+  + + G V+ +
Sbjct: 61  SNEFGQLG-----------QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAW 109

Query: 263 GDRAVDKMLFQEGNHARR-----PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
           GD +  ++    G+  +      P ++  L      ++ CG  H+  LT  G L+ WG N
Sbjct: 110 GDNSYGQIGL--GSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDN 167

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSE-SPVDQIC-TSIVLVSCGWKHTAAISEGKILTWGW 373
            +G LGIG         +     SE +PV  +     +L+S G  H+ A+S    L +GW
Sbjct: 168 SSGQLGIG---------KTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGAL-FGW 217

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     G +  GQLG  +  D   PT++    +     VSCG  HT  L
Sbjct: 218 ----------GKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVL 260



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 4/172 (2%)

Query: 43  WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG+G   S    P    +        ++ GGAH+  L+ +G ++  G N++G
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+ +     L  L  S   + V  +S G  H++ +T DG ++ +G  ++GQLG     
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNH 283

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
            +    P KV  L G    Q A G   ++A V   G+V ++G GG G+LG G
Sbjct: 284 HEY--TPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 172/355 (48%), Gaps = 49/355 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV         + A+A G AH+L +   G V+A G N  GQ
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   VV ++ G+HHS A+  DG ++ WG+N + QLG   K +
Sbjct: 230 LGDGTTTDR-LVPVQVQGLSG-VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KGS 284

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             + +P +V+ LS +     A G   S+AV   G V + G+  +G+LG G          
Sbjct: 285 MRLLVPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQLGDG---------- 332

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            T+ Y    +  L GV V +AA  + HS  +  +G V+ +G  +  ++   +G    R  
Sbjct: 333 -TTTYRLVPVPVLSGV-VSVAANDY-HSLAVRSDGTVWAWGYNSTGQL--GDGTTTTRLV 387

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     VV GGYH+  + S G  + WGSN  G LG GS   L  P RV      
Sbjct: 388 PVQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRV------ 441

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
               Q  + +  V+ G  H+ A+ S+G + TW            G++S GQLG+G
Sbjct: 442 ----QQLSGVGAVASGSSHSLALRSDGTVWTW------------GYNSFGQLGNG 480



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 43/365 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+      PV         + A+  G +H+L +   G V+A G N  GQ
Sbjct: 20  WGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVRSDGTVWAWGSNASGQ 79

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S  P+++ GL   V+ ++ G  H  A+  DG ++ WG NS+GQ G G    
Sbjct: 80  LGDETTISRS-TPVQVLGLSG-VLFVAAGSSHVLALRYDGTVWAWGSNSSGQRGDGTTNN 137

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+  + + LSG+     A G   S+AV   G   +WG+  SG+LG G  S       
Sbjct: 138 RALPV--QAQGLSGVMA--VAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTS------- 186

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
             +   P  ++ L GV     AAG  HS  +  +G V+ +G  A  ++   +G    R  
Sbjct: 187 --NRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGANASGQL--GDGTTTDRLV 240

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     V  G +H+  + + G ++ WG N++  LG GS+ +L  P +VQG    
Sbjct: 241 PVQVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLL-VPAQVQG---- 295

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                  +++V V+ G  H+ A+           GS GT    G ++ GQLG G     +
Sbjct: 296 ------LSAVVAVAAGDTHSLAV-----------GSDGTVWAVGSNNNGQLGDGTTTYRL 338

Query: 401 HPTIV 405
            P  V
Sbjct: 339 VPVPV 343



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 164/365 (44%), Gaps = 45/365 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG  +  SR  PV         +  +A G +H L L   G V+A G N  GQ
Sbjct: 72  WGSNASGQLGDETTISRSTPVQVLGLSG--VLFVAAGSSHVLALRYDGTVWAWGSNSSGQ 129

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            G       +L P++  GL   V+ ++ G +HS A+  DG  + WG N++GQLG G  + 
Sbjct: 130 RGDGTTNNRAL-PVQAQGLSG-VMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSN 187

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V+ LSG+     A G   S+AV   G V +WGA  SG+LG G          
Sbjct: 188 R--PEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGANASGQLGDGT--------- 234

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P  ++ L GV     AAG  HS  +  +G V+ +G R     L +       P+
Sbjct: 235 TTDRLVPVQVQGLSGVVA--VAAGHHHSLAVRNDGTVWGWG-RNDSNQLGKGSMRLLVPA 291

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  G  H+  + S G ++  GSN NG LG G+             +   P
Sbjct: 292 QVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTT-----------YRLVP 340

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
           V  + + +V V+    H+ A+ S+G +  WG            ++S GQLG G     + 
Sbjct: 341 V-PVLSGVVSVAANDYHSLAVRSDGTVWAWG------------YNSTGQLGDGTTTTRLV 387

Query: 402 PTIVN 406
           P  V+
Sbjct: 388 PVQVS 392



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 143/303 (47%), Gaps = 34/303 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
           +A G +H+L L   G V+A G N  GQLG        +  P+++ GL  EVV +  G  H
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLS-EVVAVDAGSSH 59

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+  DG ++ WG N++GQLG     ++  P+  +V  LSG+     A G    +A+  
Sbjct: 60  SLAVRSDGTVWAWGSNASGQLGDETTISRSTPV--QVLGLSGVLF--VAAGSSHVLALRY 115

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG+  SG+ G G          + +   P   + L GV     AAG  HS  + 
Sbjct: 116 DGTVWAWGSNSSGQRGDGT---------TNNRALPVQAQGLSGVMA--VAAGDNHSLAVR 164

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
            +G  + +G  A  ++   EG  + RP    +  L     V  G  H+  + S G ++ W
Sbjct: 165 SDGSAWAWGSNASGQL--GEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAW 222

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G+N +G LG G+      P +VQG           + +V V+ G  H+ A+ ++G +  W
Sbjct: 223 GANASGQLGDGTTTDRLVPVQVQG----------LSGVVAVAAGHHHSLAVRNDGTV--W 270

Query: 372 GWG 374
           GWG
Sbjct: 271 GWG 273



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 136/300 (45%), Gaps = 38/300 (12%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           ++ G  HS A+  DG ++ WG NS+GQLG G      +P+P +V+ LS +    A  G  
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDA--GSS 58

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S+AV   G V +WG+  SG+L  G E++I       S  TP  +  L G  V   AAG 
Sbjct: 59  HSLAVRSDGTVWAWGSNASGQL--GDETTI-------SRSTPVQVLGLSG--VLFVAAGS 107

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
            H   +  +G V+ +G  +  +      N+   P     L     V  G  H+  + S G
Sbjct: 108 SHVLALRYDGTVWAWGSNSSGQRGDGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDG 167

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEG 366
             + WGSN +G LG G+      P +VQG           + +V V+ G  H+ A+ S+G
Sbjct: 168 SAWAWGSNASGQLGEGTTSNRPEPVQVQG----------LSGVVAVAAGSAHSLAVRSDG 217

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            +  W            G ++ GQLG G   D + P  V     V A  V+ G +H+ A+
Sbjct: 218 TVWAW------------GANASGQLGDGTTTDRLVPVQVQGLSGVVA--VAAGHHHSLAV 263



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 10/180 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ + G+LG G+   R  PV         + ++A    H+L +   G V+A G N  GQL
Sbjct: 322 GSNNNGQLGDGTTTYRLVPVPV----LSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQL 377

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G        L P+++SGL  EVV +  G +HS A+  DG  + WG N+ GQLG G     
Sbjct: 378 GDGTTT-TRLVPVQVSGLS-EVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGST--T 433

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            +P+P +V+ LSG+     A G   S+A+   G V +WG    G+LG+G   +    +RS
Sbjct: 434 YLPVPVRVQQLSGV--GAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGPPLNTATVIRS 491


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  134 bits (336), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 111/397 (27%), Positives = 180/397 (45%), Gaps = 51/397 (12%)

Query: 43  WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+    +LG       +S+  P     F    + +++ G  ++  LTE G VY  G   
Sbjct: 603 WGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGS 662

Query: 100 FGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
                   LGI + I   L P+++  L  ++V +S G++HS+A+  +GEL  WG    GQ
Sbjct: 663 VKNPPVPVLGIPQ-IEDQLLPIKLESLT-DIVVVSIGFYHSAAVRANGELLTWGVGEEGQ 720

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +V   P  ++ L+  +  Q   G + ++ +T  GKV +WG+   G+LG G  
Sbjct: 721 LGHGDTQNQV--EPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGD- 777

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   +T    P  +  LE   V   A+G  H A +  +  V +FG+ A        
Sbjct: 778 --------TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAA----MGA 825

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +    P+L+  L Y   +++ CG Y T  ++  G++YTWG+ +   LG G+     +P+
Sbjct: 826 ASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQE--LGHGNNQTESTPK 883

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            V+   ++        SI  +SCG +HTA +++ G+I T             G  S GQL
Sbjct: 884 LVEALRNQ--------SIRQISCGGRHTAFLTDSGRIFT------------SGKDSFGQL 923

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           GH    D   P  +        + VSCG N+  AL +
Sbjct: 924 GHQAG-DQNKPKKIESLTKTTFISVSCGENYNIALFD 959


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 185/395 (46%), Gaps = 58/395 (14%)

Query: 55  SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
           SLE +   ++  A E      ++ +ACGG H + +T+ G  ++ G    G+LG  +  N+
Sbjct: 293 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 352

Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            +   P  I  L    ++ ++ G +HS A+T+ G+LY WGK   G LG G + +  +P  
Sbjct: 353 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 409

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
                + GI     A G   +  VT  G++ ++G G  G LGHG   S+         + 
Sbjct: 410 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 459

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
           PR +  L+G++   AA G  H+A + E            +G+++ +GD   DK     G+
Sbjct: 460 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD--GDKSRLGHGD 517

Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
              +  P+ ++ L  P   +V CG   T  LT+ G +YT GS   G LG    D    P 
Sbjct: 518 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPT 576

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
           RV G   +S V++I       +CG  H A + S  ++ TWG G            S G+L
Sbjct: 577 RVDGKLHKSFVEEI-------ACGAYHVAVLTSRTEVYTWGKG------------SNGRL 617

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GHG+  D   PT+V   ++ +   ++CG N T A+
Sbjct: 618 GHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 156/345 (45%), Gaps = 52/345 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +   P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 336 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 395

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G +
Sbjct: 396 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 454

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G   R
Sbjct: 455 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 512

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 513 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 559

Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   NG
Sbjct: 560 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            LG G  D  +SP  V     ES  D+   SI   +CG   TAA+
Sbjct: 616 RLGHGDADDRNSPTLV-----ESLKDKQVKSI---ACGSNFTAAV 652



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 134/312 (42%), Gaps = 59/312 (18%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+          N ++G   +      +P  +E    +  +  A G + +V VT
Sbjct: 269 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 328

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+  SWG    GRLGHG +S++           P+LI  L    +++ A G  HS  +
Sbjct: 329 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 379

Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G    D  +   GN       +R + + +  +   + CG YHT V+TS G+
Sbjct: 380 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 437

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-- 365
           L+T+G    G LG G    +  P           VD +     V  +CG  HTAA+ E  
Sbjct: 438 LFTFGDGTFGVLGHGDRKSVFIPRE---------VDSLKGLRTVRAACGVWHTAAVVEVM 488

Query: 366 -----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
                      GK+ TWG          DG  S  +LGHG+    + PT V         
Sbjct: 489 VGSSSSSNCSSGKLFTWG----------DGDKS--RLGHGDKEPKLVPTCVAALVEPNFC 536

Query: 415 QVSCGFNHTGAL 426
           QV+CG + T AL
Sbjct: 537 QVACGHSLTVAL 548



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 24/206 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ + P LI  L 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG YH+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 363 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 421

Query: 346 ICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
           I       +CG  HTA + S G++ T+G     GTF        G LGHG+      P  
Sbjct: 422 I-------ACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSVFIPRE 462

Query: 405 VNFGENVKALQVSCGFNHTGALLEYV 430
           V+  + ++ ++ +CG  HT A++E +
Sbjct: 463 VDSLKGLRTVRAACGVWHTAAVVEVM 488


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 189/400 (47%), Gaps = 59/400 (14%)

Query: 50  RLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG-- 104
           R+G  SLE +   ++  A E      ++ +ACGG H + +T+ G  ++ G    G+LG  
Sbjct: 284 RVG-SSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHG 342

Query: 105 ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           +  N+ +   P  I  L    ++ ++ G +HS A+T+ G+LY WGK   G LG G + + 
Sbjct: 343 VDSNVQH---PKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSH 399

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            +P       + GI     A G   +  VT  G++ ++G G  G LGHG   S+      
Sbjct: 400 WVPKRVNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------ 452

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKML 271
              + PR +  L+G++   AA G  H+A + E            +G+++ +GD   DK  
Sbjct: 453 ---FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSR 507

Query: 272 FQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              G+   +  P+ ++ L  P   +V CG   T  LT+ G +YT GS   G LG    D 
Sbjct: 508 LGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG 567

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 386
              P RV+G   +S V++I       +CG  H A + S  ++ TWG G            
Sbjct: 568 -KVPTRVEGKLHKSFVEEI-------ACGAYHVAVLTSRTEVYTWGKG------------ 607

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           S G+LGHG+  D   PT+V   ++ +   ++CG N T A+
Sbjct: 608 SNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 156/345 (45%), Gaps = 52/345 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +   P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 331 WGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 390

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G +
Sbjct: 391 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 449

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G   R
Sbjct: 450 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 507

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 508 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 554

Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   NG
Sbjct: 555 PVYGQLGN----PHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            LG G  D  +SP  V     ES  D+   SI   +CG   TAA+
Sbjct: 611 RLGHGDADDRNSPTLV-----ESLKDKQVKSI---ACGSNFTAAV 647



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 134/312 (42%), Gaps = 59/312 (18%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+          N ++G   +      +P  +E    +  +  A G + +V VT
Sbjct: 264 GDVFMWGEGIGEGVLGGGNYRVGSSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVT 323

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+  SWG    GRLGHG +S++           P+LI  L    +++ A G  HS  +
Sbjct: 324 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALSTTNIELVACGEYHSCAV 374

Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G    D  +   GN       +R + + +  +   + CG YHT V+TS G+
Sbjct: 375 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 432

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-- 365
           L+T+G    G LG G    +  P           VD +     V  +CG  HTAA+ E  
Sbjct: 433 LFTFGDGTFGVLGHGDRKSVFIPRE---------VDSLKGLRTVRAACGVWHTAAVVEVM 483

Query: 366 -----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
                      GK+ TWG          DG  S  +LGHG+    + PT V         
Sbjct: 484 VGSSSSSNCSSGKLFTWG----------DGDKS--RLGHGDKEPKLVPTCVAALVEPNFC 531

Query: 415 QVSCGFNHTGAL 426
           QV+CG + T AL
Sbjct: 532 QVACGHSLTVAL 543



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 24/206 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ + P LI  L 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG YH+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 358 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 416

Query: 346 ICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
           I       +CG  HTA + S G++ T+G     GTF        G LGHG+      P  
Sbjct: 417 I-------ACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSVFIPRE 457

Query: 405 VNFGENVKALQVSCGFNHTGALLEYV 430
           V+  + ++ ++ +CG  HT A++E +
Sbjct: 458 VDSLKGLRTVRAACGVWHTAAVVEVM 483


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A+  S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLALVPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG +HTA +++ G + T+G G            S GQ
Sbjct: 234 CHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGH +  D ++P  V      +  Q++CG  HT AL+
Sbjct: 274 LGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A+  S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLALVPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG +HTA +++ G + T+G G            S GQ
Sbjct: 234 CHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGH +  D ++P  V      +  Q++CG  HT AL+
Sbjct: 274 LGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 103 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 159

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 160 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 218

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 219 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 270

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 271 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 329

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 330 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 381

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 382 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 420



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 88  LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 146

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 147 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 196

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 197 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 252

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 253 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 311

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 312 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 351

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 352 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 389



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 36/315 (11%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
           R++ L   V Q    +  +S +     +  WG  S GQ G+      ++  P     +S 
Sbjct: 53  RVTCLGDSVAQWIRLWTLASGLDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD 112

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
              K+ A G   SV +   G+V + G    G+LGH +E +            P  I  L 
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN-----------KPEQIGALA 161

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EV 293
              +   A G  HS  + + G+++ +G  +  ++ L    +    P LI KL      +V
Sbjct: 162 DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 221

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVL 352
            CG +H   L + G+ +TWG N +G LG+G       SP+RV+      P+ Q       
Sbjct: 222 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ------- 273

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           V+ G  H+ A+S  G +  W            G ++ GQLG  ++ D   P  V      
Sbjct: 274 VAAGGAHSFALSLSGAVFGW------------GMNNAGQLGLSDEEDRESPCHVKLLRTQ 321

Query: 412 KALQVSCGFNHTGAL 426
           K + +SCG  HT  L
Sbjct: 322 KVVYISCGEEHTAVL 336



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 293 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 352

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 353 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 411

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 412 CNVKCPSPVK 421


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 183/371 (49%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E+ G   EP+  ++G  + +V ++ G  HS A++  G+++ WG  S+GQLGL  
Sbjct: 64  GQLG-HESEGSKPEPIGALAG--QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + + +  ++CG  HT A   S G I  +G G            + GQLG G
Sbjct: 289 ------LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P+ V
Sbjct: 331 HTCNVKCPSPV 341



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 16/292 (5%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG  S  S+  P+   A     +  +ACG +H++ L++ G V++ G    GQLG++  
Sbjct: 64  GQLGHESEGSKPEPI--GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121

Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
                 P  I  L ++ ++QIS G  H  A+  DG+ + WG+NS GQLGLGK+       
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P +V+ L GI   Q A G   S A++  G V  WG   SG+LG   E             
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRE 231

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +P  +K L   KV   + G  H+A + ++G V+ FG  +  ++     N    P  + +L
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 288 PYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             SE  ++ CG +HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 40/339 (11%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQ GI  N+   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P  +  L+G      A G   SVA++  G+V SWGAG  G+LG   
Sbjct: 65  QLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
           SP  V+   S+         +V +SCG +HTA +++ G + T+G G            S 
Sbjct: 232 SPCHVKLLRSQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SC 271

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GQLGH +  D ++P  V      +  Q++CG +HT A +
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 123/285 (43%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     +IP P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P  I  L G  +   A G  HS  + + G+V+ +G  +
Sbjct: 64  GQLGHESEGS-----------KPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      ++ CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+       +D I   +  V+ G  H+ A+S  G +  WG         
Sbjct: 173 KECPSQASPQRVKS------LDGI--PLAQVAAGGAHSFALSLSGAVFGWG--------- 215

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               +S GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 216 ---KNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 161/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++ L +
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           E      P  +  L   P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EYPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEYPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG   ++    +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HVREGNKPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 14/288 (4%)

Query: 53  LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
           LG +    +P    A     +  +ACG +H+L L++ G +++ G    GQLG+       
Sbjct: 66  LGHVREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV 125

Query: 113 LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
             P  I  L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V
Sbjct: 126 AVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQAS-PQRV 184

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L GI   Q A G   S A++  G V  WG   +G+LG   E             +P  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCH 235

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K L   KV   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE
Sbjct: 236 VKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSE 295

Query: 292 --EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             ++ CG  HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 296 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HVREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SYG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHVREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L S G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G   +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Anolis carolinensis]
          Length = 409

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 177/402 (44%), Gaps = 33/402 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG+LGLG  E  + P V   F   + ++K +  GG H+  LT+TG ++  G N  
Sbjct: 15  WGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCGQNKN 74

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG+      +   L  S     V+Q++ G+  +  +   G+++  G NS GQLG+  +
Sbjct: 75  GQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQLGI-SQ 133

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
            ++   +  ++E L       AA G   ++AVT  G V  WG G S +     Q   +  
Sbjct: 134 TSEGSTVSKRIESLQEKVVNVAA-GLRHALAVTENGSVFQWGIGMSSQAKRACQGEMVPS 192

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           FLR+     P  +  LE  +VKI A+G  H+  + + G +Y++G+    K L  + +   
Sbjct: 193 FLRARQ---PCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNK-HKQLVNKDDFVL 248

Query: 280 RPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG--------IGSIDV 327
           +P  I    +  E V     G  H    T  G+++TWG  + G LG        +G    
Sbjct: 249 KPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRSGLPYEQMGQDGK 308

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
                 V+ P     +    T    ++CG +H  AI  G+  +WGW            + 
Sbjct: 309 ASDENSVKEPLHSPALVPALTGASQIACGSEHNLAIVGGQCFSWGW------------NE 356

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
            G  G+G + +   P  ++   + K L V CG  H+ A   +
Sbjct: 357 HGMCGNGTEANVCAPQPLDVLSSAKLLYVGCGAGHSMAFCHF 398



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 52/351 (14%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           L G    G+LGLG  E      +CS+    S+  +ACG   T+ L  +G V++ G N FG
Sbjct: 68  LCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFG 127

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLGIS+    S    RI  L+++VV ++ G  H+ A+T +G ++ WG   + Q    K+A
Sbjct: 128 QLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGMSSQ---AKRA 184

Query: 162 AK--VIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
            +  ++P       P KV  L     K  A G   + A+T  G++  WG     +L + +
Sbjct: 185 CQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKHKQLVN-K 243

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--------- 264
           +  +L   +  + Y         G KV+    G+ H     E G+V+ +G          
Sbjct: 244 DDFVLKPQKIDAHY-------FGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRS 296

Query: 265 -----------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
                      +A D+   +E  H+  P+L+  L  + ++ CG  H   +  GG+ ++WG
Sbjct: 297 GLPYEQMGQDGKASDENSVKEPLHS--PALVPALTGASQIACGSEHNLAIV-GGQCFSWG 353

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCGWKHTAAI 363
            NE+G  G G+   + +P+         P+D + ++ +L V CG  H+ A 
Sbjct: 354 WNEHGMCGNGTEANVCAPQ---------PLDVLSSAKLLYVGCGAGHSMAF 395



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 163/358 (45%), Gaps = 46/358 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWG 148
           ++  G N +GQLG+       L P  + G    ++ V  I+ G  HS+ +T  GEL++ G
Sbjct: 12  LFTWGANSYGQLGLGHREDVFL-PQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCG 70

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           +N NGQLGLG    + +        L G    Q A G++ ++ + G G+V S G+   G+
Sbjct: 71  QNKNGQLGLGH--TEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQ 128

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFG--- 263
           LG          +  TSE +  + K +E ++ K+   AAG  H+  + ENG V+ +G   
Sbjct: 129 LG----------ISQTSEGS-TVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGM 177

Query: 264 ----DRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
                RA    +      AR+P  ++ L  +  + V  G  H   LT  GELY WG+N++
Sbjct: 178 SSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKH 237

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGS 376
             L +   D +  P+++   +           +  V  GW H  A +E GK+ TWG    
Sbjct: 238 KQL-VNKDDFVLKPQKIDAHYFGG------EKVRRVWNGWTHMVAQTEMGKVFTWG-RAD 289

Query: 377 HGTFSEDG--HSSGGQLGHGNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALL 427
           +G     G  +   GQ G  +D + +      P +V       A Q++CG  H  A++
Sbjct: 290 YGQLGRSGLPYEQMGQDGKASDENSVKEPLHSPALVP--ALTGASQIACGSEHNLAIV 345


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A+  S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLALVPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG +HTA +++ G + T+G G            S GQ
Sbjct: 234 CHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGH +  D ++P  V      +  Q++CG  HT AL+
Sbjct: 274 LGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 187/404 (46%), Gaps = 52/404 (12%)

Query: 44  GNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           G+G  GRLGL    +R     P+     +   +K+LACGG H L L+  G VY+ G ND 
Sbjct: 10  GHGAGGRLGLNDERARTAFTGPL--GTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYNDS 67

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            Q G         EP  I  L+  +VVQI+ G  HS A+T   E++ WG+  +GQLG G 
Sbjct: 68  RQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +   +  P  V+ L G   K    G+E + A+TG GKVL +G+  SG+LG+G     +G
Sbjct: 128 VSD--VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIG 185

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNH 277
                + Y P  +K L    +  A  G   S  +   G++Y  G  A  ++   F+E   
Sbjct: 186 ----GNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVES 241

Query: 278 ARRP------SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              P       +  K  + + V CG  H+  L+  G +Y+WGS  N  LG G  +   +P
Sbjct: 242 LNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTP 301

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
           + V       P    C S   VS G  H+AA+S  G+I TW            G +  GQ
Sbjct: 302 KMV-AMLEADP----CVS---VSAGGYHSAAVSATGRIYTW------------GRNFVGQ 341

Query: 391 LGHGNDV-----DYIH--PTIVNFGENVK----ALQVSCGFNHT 423
           LG G ++     D++   PT V    +V     A++V CG  HT
Sbjct: 342 LGTGQNIDDHSADHVQRLPTRVILKGSVDSSEMAMRVGCGQCHT 385



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 18/255 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +G+LG G +   W P +    +   +K++ CG  +T  +T TG V   G    G+
Sbjct: 115 WGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGK 174

Query: 103 LG---ISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG   +   IG ++  P+++  L K  ++Q + G + S  ++  G+LY  G  +NGQLG+
Sbjct: 175 LGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGI 234

Query: 158 GKKAAKVIPIP----TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
             +  + + +P     +     G+F K  + G   S+A++  G V SWG+G +  LGHG 
Sbjct: 235 PFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGG 294

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    +   +TP+++  LE       +AG  HSA +   GR+Y +G   V ++   
Sbjct: 295 ---------TEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTG 345

Query: 274 EGNHARRPSLISKLP 288
           +         + +LP
Sbjct: 346 QNIDDHSADHVQRLP 360



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 20/137 (14%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
           + + CGG H  +L+  G++Y+WG N++   G G  D+     R         V QI    
Sbjct: 41  KSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQI---- 96

Query: 351 VLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              + G  H+ A+++  ++ TWG G              GQLGHG+  D   P +V   +
Sbjct: 97  ---AAGEDHSVALTDRSEVFTWGRG------------LHGQLGHGDVSDVWFPFLVKGLQ 141

Query: 410 NVKALQVSCGFNHTGAL 426
                 + CG+ +T A+
Sbjct: 142 GKGIKSIGCGYENTFAI 158


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A+  S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLALVPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG +HTA +++ G + T+G G            S GQ
Sbjct: 234 CHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGH +  D ++P  V      +  Q++CG  HT AL+
Sbjct: 274 LGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A+  S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLALVPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG +HTA +++ G + T+G G            S GQ
Sbjct: 234 CHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGH +  D ++P  V      +  Q++CG  HT AL+
Sbjct: 274 LGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SYG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L S G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G   +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 28  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 84

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 85  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 143

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 144 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 195

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 196 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 254

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 255 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 306

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 307 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 345



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 13  LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 71

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 72  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 121

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 122 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 177

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 178 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 236

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 237 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 276

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 277 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 314



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 8   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 67

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 68  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 116

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 117 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 176

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 177 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 220

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 221 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 261



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 218 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 277

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 278 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 336

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 337 CNVKCPSPVK 346


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +     +P +I  L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL  
Sbjct: 64  GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + + +  ++CG  HT A   S G I  +G G            + GQLG G
Sbjct: 289 ------LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P+ V
Sbjct: 331 HTCNVKCPSPV 341



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 160/339 (47%), Gaps = 40/339 (11%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + +GQ GI  N+   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P ++  L+G      A G   SVA++  G++ SWGAG  G+LG   
Sbjct: 65  QLGHDCEGSK----PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
           SP  V+   S+         +V +SCG +HTA +++ G + T+G G            S 
Sbjct: 232 SPCHVKLLRSQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SC 271

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GQLGH +  D ++P  V      +  Q++CG +HT A +
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 123/285 (43%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     +IP P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P  I  L G  +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHDCEGS-----------KPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+       +D I   +  V+ G  H+ A+S  G +  WG         
Sbjct: 173 KECPSQASPQRVKS------LDGI--PLAQVAAGGAHSFALSLSGAVFGWG--------- 215

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               +S GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 216 ---KNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
           Kuenenia stuttgartiensis]
          Length = 387

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 143/283 (50%), Gaps = 19/283 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS +S   P+     E   + A++CGG H L L   G V+A G+ND GQ
Sbjct: 111 WGGNWAGQLGDGSYKSSNIPIKTK--ELSGIIAISCGGQHNLALKSDGTVWAWGINDKGQ 168

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LGI +     + P+RI GL   +V IS G +HS AI  DG L+ WG N+  QLG G    
Sbjct: 169 LGIGDAKNQQI-PIRIPGL-NNIVAISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATN 226

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L  I       G + S+A+   G +++WG+ G  +LG G          
Sbjct: 227 RCSPV--HVSNLRDIIAVNG--GGDFSLALKSDGTIMAWGSNGLSQLGDGT--------- 273

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  + ++  + ++IAA G  HS  +   G+V+ FG         +    A RP 
Sbjct: 274 TTNRNTPVNVSDVRDI-IEIAAKGN-HSLALTIEGKVWEFGSIGATPTEKEVTLPAYRPV 331

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           L++++     + CG +H  VL + G L+ WG N  G LG G++
Sbjct: 332 LVNEITDVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDGTV 374



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 17/271 (6%)

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
           V ++F       +A G  HTL L   G +++ G N++GQLG    I     P+++  L  
Sbjct: 30  VKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLG-DGTIKNKHSPVQVKHLSS 88

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            +V I  G  HS A+  DG ++ WG N  GQLG G   +  IPI TK   LSGI     +
Sbjct: 89  IIV-IDGGAWHSIALKSDGTVWAWGGNWAGQLGDGSYKSSNIPIKTKE--LSGIIA--IS 143

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G + ++A+   G V +WG    G+LG G          + ++  P  I  L  + V I+
Sbjct: 144 CGGQHNLALKSDGTVWAWGINDKGQLGIGD---------AKNQQIPIRIPGLNNI-VAIS 193

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           A G+ HS  I  +G ++ +G   ++++      +   P  +S L     V  GG  +  L
Sbjct: 194 AGGY-HSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSPVHVSNLRDIIAVNGGGDFSLAL 252

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            S G +  WGSN    LG G+    ++P  V
Sbjct: 253 KSDGTIMAWGSNGLSQLGDGTTTNRNTPVNV 283



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 132/301 (43%), Gaps = 40/301 (13%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +I+ G  H+ A+  DG L+ WGKN  GQLG G    K  P+  +V+ LS I       G 
Sbjct: 41  KIAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNKHSPV--QVKHLSSIIVIDG--GA 96

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G V +WG   +G+LG G   S            P   KEL G+ + I+  G
Sbjct: 97  WHSIALKSDGTVWAWGGNWAGQLGDGSYKS---------SNIPIKTKELSGI-IAISCGG 146

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H+  +  +G V+ +G     ++   +  + + P  I  L     +  GGYH+  + S 
Sbjct: 147 -QHNLALKSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGLNNIVAISAGGYHSLAIKSD 205

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
           G L+ WGSN    LG GS     SP  V               I+ V+ G   + A+ S+
Sbjct: 206 GSLWAWGSNNMEQLGDGSATNRCSPVHVSN----------LRDIIAVNGGGDFSLALKSD 255

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G I+ WG          +G S   QLG G   +   P  VN  +    ++++   NH+ A
Sbjct: 256 GTIMAWG---------SNGLS---QLGDGTTTNRNTP--VNVSDVRDIIEIAAKGNHSLA 301

Query: 426 L 426
           L
Sbjct: 302 L 302



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 12/129 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G+  +R  PV  S  +   +  +A  G H+L LT  G V+     +FG 
Sbjct: 261 WGSNGLSQLGDGTTTNRNTPVNVS--DVRDIIEIAAKGNHSLALTIEGKVW-----EFGS 313

Query: 103 LGIS----ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G +    E    +  P+ ++ +  +V+ I+ G  H+  +  DG L++WG N+ GQLG G
Sbjct: 314 IGATPTEKEVTLPAYRPVLVNEIT-DVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDG 372

Query: 159 KKAAKVIPI 167
              +K  P+
Sbjct: 373 TVGSKTKPV 381


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 177/396 (44%), Gaps = 43/396 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G    G LG  +   +    +  +  +  +  +A G   + FLTE G VY  GLN  GQL
Sbjct: 46  GQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQL 105

Query: 104 GISENIG-------YSLEPLRISGLKKE--VVQIS--TGYHHSSAITVDGELYMWGKNSN 152
               + G       YS +   + GL  +  VVQ+S   G  H   +T  G++Y  G N++
Sbjct: 106 ARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNH 165

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLGLG  + K+ P    VE L  +    A+  +  SV V+  G   S+G    G+LG G
Sbjct: 166 GQLGLG--STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIG 223

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              + L          P  ++      V++AA G  H+  + E G V+  G     ++  
Sbjct: 224 TRPNQL---------LPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGL 274

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
              +    P+LI+ L    +  + CG  HTCV+   G+L+T+G N  G LG+G  D + S
Sbjct: 275 GSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSS 334

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           P +V+   +          +V +SCG   T  +SE   L W +G           +  GQ
Sbjct: 335 PMQVETLRN--------VKVVKISCGTHFTCVLSESGEL-WSFGC----------NCHGQ 375

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           LG G+  D + P +V         +++CGF+H  A+
Sbjct: 376 LGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 160/356 (44%), Gaps = 55/356 (15%)

Query: 92  VYATGLNDFGQLGIS---ENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           V+A G N  G+LG S   E +  SL + LR    +K +V+++ G   S  +T +G++Y  
Sbjct: 42  VFACGQNRKGELGHSTFREQVEMSLVQSLR----RKRIVKVAAGSETSYFLTEEGKVYCC 97

Query: 148 GKNSNGQLGLGK---KAAKVIPIPTKVECLSGIFTKQAAL------GFEQSVAVTGGGKV 198
           G NS GQL        A +     + +E + G+      +      G E  + VT  G+V
Sbjct: 98  GLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQV 157

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFLHSACIDEN 256
            S G    G+LG G           +++ +P L  ++ L+ V+V  A+  + HS  +  +
Sbjct: 158 YSCGCNNHGQLGLG-----------STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSD 206

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWG 313
           G  + FG     ++      +   P  + +LP    V    CG YHT  LT  G +++ G
Sbjct: 207 GSAFSFGLNDCGQLGIGTRPNQLLPHRV-ELPSPHLVRLAACGQYHTIFLTEEGMVFSCG 265

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            N NG LG+GS    + P  +     E P         +++CG+ HT  + E GK+ T+G
Sbjct: 266 KNLNGQLGLGSRSSTNVPTLI-AALQERPAS-------MIACGYSHTCVVLEDGKLFTFG 317

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           +            +  GQLG G+      P  V    NVK +++SCG + T  L E
Sbjct: 318 Y------------NHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSE 361



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 11/207 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D G+LG+G+  ++  P        H ++  ACG  HT+FLTE G V++ G N  GQ
Sbjct: 212 FGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQ 271

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+      ++  L  +  ++    I+ GY H+  +  DG+L+ +G N  GQLGLG   +
Sbjct: 272 LGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS 331

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  P +VE L  +   + + G   +  ++  G++ S+G    G+LG G          
Sbjct: 332 --VSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGD--------- 380

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLH 249
           ST    P L+  +    +   A GF H
Sbjct: 381 STDRLVPVLVPSMTKKNLSEIACGFHH 407



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G    G+LGLG  +S   P+         +  ++CG   T  L+E+G +++ G N  GQ
Sbjct: 316 FGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQ 375

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           LG+ ++    +  L  S  KK + +I+ G+HH  AI+
Sbjct: 376 LGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 44/350 (12%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           G +HTL L   G V+A G ND+GQLG +  I  +  P+ + GL K V  IS G ++S A+
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDIN-SPIPVEGLNK-VSSISAGKYYSMAL 240

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
             DG ++ WG+N  GQLG G  A ++ P+  +V+ LSGI    +  G   S+A+   G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRLSPV--QVQNLSGIIAISS--GNSHSLALKDDGTV 296

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            +WG   SG+LG G          + S+Y P  ++ L G+ V I + GF +S  +  +G 
Sbjct: 297 WAWGDNESGQLGDG---------TTNSKYIPSQVQGLSGI-VSI-SCGFYYSMALKNDGT 345

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+++GD    ++   +G    R +   +S L     + CG  H+  L + G ++TWG N 
Sbjct: 346 VWVWGDNTSGQL--GDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNA 403

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
            G LG G+    ++   + G             I+ ++CG  H+ A+ +   + W WG +
Sbjct: 404 FGQLGDGTKVSKNTAVPISG----------LDGIIAITCGTSHSMALKDDGTV-WAWGDN 452

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                       GQLG+G  +    P+ V+    +K+  + CG++ + AL
Sbjct: 453 Q----------YGQLGNGTFISNTTPSQVSNLSGIKS--IFCGYSTSFAL 490



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 181/387 (46%), Gaps = 50/387 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  DYG+LG  +      P+      K S  +++ G  +++ L   G V+  G ND+GQL
Sbjct: 200 GENDYGQLGNNNTIDINSPIPVEGLNKVS--SISAGKYYSMALKSDGTVWTWGENDYGQL 257

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G        L P+++  L   ++ IS+G  HS A+  DG ++ WG N +GQLG G   +K
Sbjct: 258 G-DGTTATRLSPVQVQNLSG-IIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSK 315

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
              IP++V+ LSGI +   + GF  S+A+   G V  WG   SG+LG G          +
Sbjct: 316 Y--IPSQVQGLSGIVS--ISCGFYYSMALKNDGTVWVWGDNTSGQLGDG---------TT 362

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T   T   +  L+GV     A G  HS  +  +G V+ +G  A  ++   +G    + + 
Sbjct: 363 TDRNTAVPVSGLDGVIA--IACGVNHSMALRNDGTVWTWGFNAFGQL--GDGTKVSKNTA 418

Query: 284 --ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             IS L     + CG  H+  L   G ++ WG N+ G LG G+     +P +V       
Sbjct: 419 VPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSN----- 473

Query: 342 PVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                 + I  + CG+  + A+  +G +  W W          G++  G+LG G     I
Sbjct: 474 -----LSGIKSIFCGYSTSFALKPDGTV--WAW----------GNNEYGELGKGFTTRVI 516

Query: 401 HPT-IVNFGENVKALQVSCGFNHTGAL 426
           +PT  +N G+ +KA  +S G +H  AL
Sbjct: 517 YPTETLNIGD-IKA--ISIGSSHCLAL 540



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 178/387 (45%), Gaps = 48/387 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LG G+  +R  PV         + A++ G +H+L L + G V+A G N+ GQ
Sbjct: 249 WGENDYGQLGDGTTATRLSPVQVQNLS--GIIAISSGNSHSLALKDDGTVWAWGDNESGQ 306

Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  + N  Y   P ++ GL   +V IS G+++S A+  DG +++WG N++GQLG G   
Sbjct: 307 LGDGTTNSKYI--PSQVQGLSG-IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTT 363

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +   +P  V  L G+     A G   S+A+   G V +WG    G+LG G +       
Sbjct: 364 DRNTAVP--VSGLDGVI--AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTK------- 412

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              S+ T   I  L+G+       G  HS  + ++G V+ +GD    ++          P
Sbjct: 413 --VSKNTAVPISGLDGIIA--ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP 468

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSE 340
           S +S L   + + CG   +  L   G ++ WG+NE G LG G +  V++  E +      
Sbjct: 469 SQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLN----- 523

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    I  +S G  H  A+ ++G +  W WG +            GQLG G     
Sbjct: 524 ------IGDIKAISIGSSHCLALKNDGTV--WAWGDNR----------YGQLGDGTTTIK 565

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             P  V+    + A  +S G +H+ AL
Sbjct: 566 SLPVQVSGISGITA--ISAGGSHSLAL 590



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 151/334 (45%), Gaps = 34/334 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+   G+LG G+   R   V  S  +   + A+ACG  H++ L   G V+  G N FG
Sbjct: 348 VWGDNTSGQLGDGTTTDRNTAVPVSGLD--GVIAIACGVNHSMALRNDGTVWTWGFNAFG 405

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    +  +   + ISGL   ++ I+ G  HS A+  DG ++ WG N  GQLG G   
Sbjct: 406 QLGDGTKVSKN-TAVPISGLDG-IIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFI 463

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +     P++V  LSGI  K    G+  S A+   G V +WG    G LG G         
Sbjct: 464 SNT--TPSQVSNLSGI--KSIFCGYSTSFALKPDGTVWAWGNNEYGELGKG--------- 510

Query: 222 RSTSEYTPRLIKELEGVK---VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                +T R+I   E +    +K  + G  H   +  +G V+ +GD    ++        
Sbjct: 511 -----FTTRVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIK 565

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +S +     +  GG H+  L S G ++ WG N  G LG G+ +  ++P +V    
Sbjct: 566 SLPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVS--- 622

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
                 ++    V+ +C ++  A  ++G +  WG
Sbjct: 623 ------ELSGITVISNCIYRSFALKNDGTVWVWG 650



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 144/330 (43%), Gaps = 37/330 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN +YG LG G       P          +KA++ G +H L L   G V+A G N +GQ
Sbjct: 499 WGNNEYGELGKGFTTRVIYP--TETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQ 556

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       SL P+++SG+   +  IS G  HS A+  DG ++ WG+N+ GQLG G K  
Sbjct: 557 LGDGTTTIKSL-PVQVSGISG-ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKED 614

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LSGI      +   +S A+   G V  WG+          +S  L   +
Sbjct: 615 RNTPV--QVSELSGITVISNCI--YRSFALKNDGTVWVWGS----------DSYNLPLEK 660

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P  I  L G+       G  H+  +  +G V+ +G     +           P 
Sbjct: 661 MT---MPIQISGLSGIIA--IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPV 715

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L   + +  GG  +  L S G ++ W          G I V  SP  V+   +   
Sbjct: 716 QVSGLSGVKAIAVGGNRSIALKSDGTVWQW----------GRILVSVSPSTVETWTTARQ 765

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           VD + + IV +S    + A  ++GK+ TWG
Sbjct: 766 VDGL-SEIVSIS---NNVALKNDGKVFTWG 791



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 40/309 (12%)

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           ++  ++++S G  H+ A+  DG ++  G+N  GQLG         PIP  VE L+ + + 
Sbjct: 173 IEGPIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIP--VEGLNKVSSI 230

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A  G   S+A+   G V +WG    G+LG G  ++ L         +P  ++ L G+  
Sbjct: 231 SA--GKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL---------SPVQVQNLSGIIA 279

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
              ++G  HS  + ++G V+ +GD    ++     N    PS +  L     + CG Y++
Sbjct: 280 --ISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYS 337

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L + G ++ WG N +G LG G+    ++   V G             ++ ++CG  H+
Sbjct: 338 MALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSG----------LDGVIAIACGVNHS 387

Query: 361 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A+ ++G + TWG+            ++ GQLG G  V     T V        + ++CG
Sbjct: 388 MALRNDGTVWTWGF------------NAFGQLGDGTKVS--KNTAVPISGLDGIIAITCG 433

Query: 420 FNHTGALLE 428
            +H+ AL +
Sbjct: 434 TSHSMALKD 442



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 21/176 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+ G G+  +   PV  S      +KA+A GG  ++ L   G V+      +G+
Sbjct: 695 WGKNNFGQFGDGTTTTTNIPVQVSGLS--GVKAIAVGGNRSIALKSDGTVW-----QWGR 747

Query: 103 LGIS---ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           + +S     +       ++ GL  E+V IS    ++ A+  DG+++ WG N  GQLG G 
Sbjct: 748 ILVSVSPSTVETWTTARQVDGLS-EIVSIS----NNVALKNDGKVFTWGANDYGQLGDGT 802

Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             A+V   P   +E ++G+ +         S+ +   G + +WG    G+LG+G+ 
Sbjct: 803 TTARVTVAPVSGLEGVAGVASSDTT-----SMVLMNDGTIRAWGKNNFGQLGNGER 853


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 178/370 (48%), Gaps = 39/370 (10%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG LE      P    +F    +  +ACG  HTLF+ + G V + G ND+
Sbjct: 14  WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73

Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  I  L ++ V+Q S+G  HS+ +T  G+++ WG N + QLG G+
Sbjct: 74  GQLGHEKPCK---RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ 130

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    IP  V  L+     Q A G   +V +T  G++ +WG+       HGQ    LG
Sbjct: 131 VDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSN-----NHGQ----LG 181

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T +  P+ +  + G+ +   AAG  H+  +  +G ++ +G  +  ++   +     
Sbjct: 182 LANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+L+  L       + CG  H+  LT  G ++T+G+   G LG  + +    P +V   
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKV--- 298

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                 + + +S+  ++CG KH+ A   S G++  +G GG+            GQLG G+
Sbjct: 299 -----FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGN------------GQLGTGS 341

Query: 396 DVDYIHPTIV 405
            V+ + P +V
Sbjct: 342 TVNRMSPAMV 351



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 18/300 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    +   RP +  +  + ++   + G  H+  LT+ G V+  G N+  QL
Sbjct: 69  GNNDYGQLG--HEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQL 126

Query: 104 GISENIGYSLE-PLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G  +    S   P  + GL   +VVQ++ G  H+  +T  G++Y WG N++GQLGL  K 
Sbjct: 127 GRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKT 186

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  V C+SG+   + A G + ++ +T  G + +WG    G+LG G +       
Sbjct: 187 PQ--NEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQD----- 239

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P L+K L    +   A G  HS  +  +G V+ FG     ++     N+   P
Sbjct: 240 ----RGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLP 295

Query: 282 SLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + +L  S   ++ CG  H+   + S G +Y +G   NG LG GS     SP  V+GPF
Sbjct: 296 RKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKGPF 355



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 132/306 (43%), Gaps = 36/306 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           EVV I+ G  H+  +  DG +   G N  GQLG  K   +    P  ++ L      QA+
Sbjct: 45  EVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKR----PALIDSLGERNVLQAS 100

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G + S  +T  G+V +WG+    +LG GQ       + S S   PR+++ L   KV   
Sbjct: 101 SGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ-------VDSASTSIPRMVRGLADHKVVQV 153

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP---SLISKLPYSEEVVCGGYHT 300
           A G  H+  +   G++Y +G     ++          P   S IS LP    V  G  H 
Sbjct: 154 ACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVR-VAAGADHN 212

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
            VLT  G L+ WG N  G LG+G      +P  V+   ++     IC     ++CG  H+
Sbjct: 213 LVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQG----ICA----LACGDDHS 264

Query: 361 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A++ +G + T+G G              GQLGH    + + P  V         Q++CG
Sbjct: 265 LALTRDGGVFTFGAGMY------------GQLGHNTSNNELLPRKVFELMGSSVTQIACG 312

Query: 420 FNHTGA 425
             H+ A
Sbjct: 313 RKHSIA 318



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 42/288 (14%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  ++GQLGLG    + + +P ++     +     A G + ++ V   G+VLS G    
Sbjct: 14  WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +               P LI  L    V  A++G  HS  + + G+V+ +G   
Sbjct: 74  GQLGHEKPCK-----------RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNE 122

Query: 267 VDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +++   + + A    P ++  L   +  +V CG  HT  LT+ G++YTWGSN +G LG+
Sbjct: 123 DNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTS---IVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
            +    + P+ V            C S   IV V+ G  H   ++  G +  WG      
Sbjct: 183 ANKTPQNEPQWVS-----------CISGLPIVRVAAGADHNLVLTISGALFAWGC----- 226

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  +S GQLG G+D D   PT+V    N     ++CG +H+ AL
Sbjct: 227 -------NSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLAL 267


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  132 bits (333), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 18/295 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P         S+  ++ G +H+L LT+ G V+A GLN  GQ
Sbjct: 94  WGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLALTDDGRVFAWGLNSSGQ 151

Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+++ GL  +  +  ++ G +HS A+T DG ++ WGKNS+GQLG    
Sbjct: 152 LG-DGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNST 210

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               IP+  +V+ L    T  AA G   S+A+T  G++ +WG   SG+LG G  S+    
Sbjct: 211 VDSSIPV--QVQGLPANVTAVAA-GGNHSLALTSDGRIYAWGLNSSGQLGDGTTSN---- 263

Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  TP L+  L  G K    +AG  HS  + ++G VY +G  +  ++       + 
Sbjct: 264 -----SSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASE 318

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            P  ++ L     V  GG  +  LTS G +Y WG N +G LG G+    ++P RV
Sbjct: 319 MPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRV 373



 Score =  124 bits (311), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 114/363 (31%), Positives = 170/363 (46%), Gaps = 49/363 (13%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A++ GG+H+L LT    V+A G N  GQLG     G    P    GL   V Q+S G  H
Sbjct: 74  AVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQ-TPTPAQGL-PSVAQVSAGESH 131

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVT 193
           S A+T DG ++ WG NS+GQLG G  A    P+  +V+ L+   T K  A G   S+A+T
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPV--QVQGLATDSTIKVVAAGGNHSLALT 189

Query: 194 GGGKVLSWGAGGSGRLGHGQ--ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
             G+V +WG   SG+LG+    +SSI           P  ++ L    V   AAG  HS 
Sbjct: 190 SDGRVFAWGKNSSGQLGNNSTVDSSI-----------PVQVQGLPA-NVTAVAAGGNHSL 237

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
            +  +GR+Y +G  +  ++     +++  P L++ LP   +   V  G  H+  L   G 
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT 297

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGK 367
           +Y WG N  G LG G+      P +V G            ++  VS G   + A+ S+G 
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPVQVTG----------LANVTAVSAGGSDSLALTSDGY 347

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP----TIVNFGENVKALQVSCGFNHT 423
           +  WG             +S GQLG G   +   P    ++++ G  +  LQ+S G ++ 
Sbjct: 348 VYAWGL------------NSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNP 395

Query: 424 GAL 426
            AL
Sbjct: 396 IAL 398


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG++        P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + +NG V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 158/338 (46%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +   GE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKNGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 121/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +  GG+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT+ G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 818

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 46/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ +YG+LGLG  + R  P    +       A++ G  H+L +   G +++ G ND GQ
Sbjct: 296 WGDNEYGQLGLGDTDERHAPEQVGS--NTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQ 353

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +    +  P ++ G   +   +S G  HS A+  DG L +WG N  GQLGLG   +
Sbjct: 354 LGLGDTADRN-APEQV-GADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVS 411

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+P      SGI       G   +VAV   G + +WG    G+LG       LG +R
Sbjct: 412 RDAPVP----IASGIAL---VAGRNHTVAVNPDGTLRAWGDNEYGQLG-------LGVMR 457

Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               Y     + + G     +    F HS  + ++G ++ +G     ++   + +    P
Sbjct: 458 ----YIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATP 513

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +        V    YHT  + + G L+ WG N +G LG+   +  H+PERV       
Sbjct: 514 EQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDTNDRHTPERVGSD---- 569

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                 T    VS G  HT+A+     L W WG +H           GQLG G+  D + 
Sbjct: 570 ------TDWATVSVGQSHTSAVKPDGTL-WAWGWNH----------YGQLGLGDTSDRLS 612

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V  G     L VS G +HT A+
Sbjct: 613 PEQV--GGESNWLAVSTGLHHTVAV 635



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 164/389 (42%), Gaps = 49/389 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDF 100
           WG+ +YG+LGLG +      V  S     S  A   GG+  H+L L + G ++A G N++
Sbjct: 443 WGDNEYGQLGLGVMR---YIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNY 499

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG+ +    +  P ++ G   +   ++   +H+ A+  DG L+ WG+NS+GQLGL   
Sbjct: 500 GQLGLGDTDDRAT-PEQV-GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDT 557

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +    P +V   +   T   ++G   + AV   G + +WG    G+LG G  S     
Sbjct: 558 NDR--HTPERVGSDTDWAT--VSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD---- 609

Query: 221 LRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                    RL  E  G +    A   G  H+  +  +G ++ +G     ++     +  
Sbjct: 610 ---------RLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDR 660

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +        V   GY T  + + G L+ WG N NG LG+G  D  ++P +V    
Sbjct: 661 HAPVQVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQVGND- 719

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                         VS G  HT A  E   L W WG +H           GQLG G+  +
Sbjct: 720 ---------ADWAAVSTGLFHTLAFKEDDTL-WAWGRNH----------DGQLGLGDTDN 759

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALL 427
              P  V  G       VS G  HT A +
Sbjct: 760 RDAP--VQVGNETDWSTVSGGGYHTLATM 786



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 162/367 (44%), Gaps = 55/367 (14%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
           V C+AF       LA G  HT+ +   G ++A G N +G+LG+ +     + P ++ G  
Sbjct: 120 VECTAF-----PVLAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDV-PEQV-GTD 172

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            +   +S G  H+ A+  +G L+ WG++  G++GLG    +  P         G+     
Sbjct: 173 SDWTAVSAGRDHTVAVKANGTLWAWGRS--GRIGLGDSGDRDEPEQV------GVDNDWI 224

Query: 183 AL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           AL  G   +VAV   G + +WG   +G+LG G          +   YTP  +        
Sbjct: 225 ALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD---------TNHHYTPTQVGTDTDWAK 275

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           KI+A G  HS  +  +G ++ +GD    ++   + +    P  +        +  G  H+
Sbjct: 276 KISA-GRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHS 334

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             + + G L++WG N++G LG+G     ++PE+V             T   LVS G +H+
Sbjct: 335 LAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGAD----------TDWDLVSAGGEHS 384

Query: 361 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A+ ++G ++ W            G +  GQLG G+ V    P  +  G     + +  G
Sbjct: 385 LAVKADGTLMVW------------GLNHLGQLGLGDTVSRDAPVPIASG-----IALVAG 427

Query: 420 FNHTGAL 426
            NHT A+
Sbjct: 428 RNHTVAV 434



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 140/330 (42%), Gaps = 36/330 (10%)

Query: 16  QDIKLGSKLGICKRWISSTLQRRFA-------ALWGNGDYGRLGLGSLESRWRPVVCSAF 68
            D  +  ++G    W + +  R           LW  G  GR+GLG    R  P      
Sbjct: 161 DDRDVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGV- 219

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
             +   AL+ GG+HT+ +   G ++A G N+ GQLG+ +   +   P ++        +I
Sbjct: 220 -DNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD-TNHHYTPTQVGTDTDWAKKI 277

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GF 186
           S G  HS A+  DG L+ WG N  GQLGLG    +  P         G  T  AA+  G 
Sbjct: 278 SAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQV------GSNTDWAAISAGR 331

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV--KIAA 244
             S+AV   G + SWG   SG+LG G  +              R   E  G      + +
Sbjct: 332 RHSLAVKADGSLWSWGYNDSGQLGLGDTAD-------------RNAPEQVGADTDWDLVS 378

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
           AG  HS  +  +G + ++G   + ++    G+   R + +  +     +V G  HT  + 
Sbjct: 379 AGGEHSLAVKADGTLMVWGLNHLGQLGL--GDTVSRDAPV-PIASGIALVAGRNHTVAVN 435

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             G L  WG NE G LG+G +  + +P + 
Sbjct: 436 PDGTLRAWGDNEYGQLGLGVMRYIVTPSQT 465



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 38/333 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YGRLGLG  +   R V           A++ G  HT+ +   G ++A G +  G+
Sbjct: 147 WGRNGYGRLGLGDTDD--RDVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRS--GR 202

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G+ ++ G   EP ++ G+  + + +S G  H+ A+  DG L+ WG+N+ GQLGLG    
Sbjct: 203 IGLGDS-GDRDEPEQV-GVDNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGDTNH 260

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P     +     + K+ + G   S+AV   G + +WG    G+LG          L 
Sbjct: 261 HYTPTQVGTDT---DWAKKISAGRRHSLAVKADGSLWAWGDNEYGQLG----------LG 307

Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            T E   R   E  G     AA  AG  HS  +  +G ++ +G     ++   +      
Sbjct: 308 DTDE---RHAPEQVGSNTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQLGLGDTADRNA 364

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +      + V  GG H+  + + G L  WG N  G LG+G                +
Sbjct: 365 PEQVGADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDT-----------VSRD 413

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWG 372
           +PV  I + I LV  G  HT A++ +G +  WG
Sbjct: 414 APV-PIASGIALV-AGRNHTVAVNPDGTLRAWG 444



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 169/391 (43%), Gaps = 52/391 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG   SR  PV  +     S  AL  G  HT+ +   G + A G N++G
Sbjct: 395 VWGLNHLGQLGLGDTVSRDAPVPIA-----SGIALVAGRNHTVAVNPDGTLRAWGDNEYG 449

Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+   + Y + P + ++G     V   + ++HS  +  DG L+ WG+N+ GQLGLG  
Sbjct: 450 QLGLGV-MRYIVTPSQTVTGSAWAAVNGGS-FNHSLGLRDDGTLWAWGRNNYGQLGLGDT 507

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +  P         G  T  AA+      ++AV   G + +WG   SG+         L
Sbjct: 508 DDRATPEQV------GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQ---------L 552

Query: 219 GFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           G   +   +TP R+  + +   V +   G  H++ +  +G ++ +G     ++   + + 
Sbjct: 553 GLSDTNDRHTPERVGSDTDWATVSV---GQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD 609

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +        V  G +HT  + + G L+ WG N  G LG+G     H+P +V   
Sbjct: 610 RLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVG-- 667

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
              S  D    S    + G++  A  ++G +  W            G ++ GQLG G+  
Sbjct: 668 ---SDTDWAAVS----ASGYRTLAVKADGTLWAW------------GENNNGQLGLGDTD 708

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           +   P  V  G +     VS G  HT A  E
Sbjct: 709 NRNTPAQV--GNDADWAAVSTGLFHTLAFKE 737



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 24/296 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL     R  P    +        ++ G +HT  +   G ++A G N +GQ
Sbjct: 544 WGRNSSGQLGLSDTNDRHTPERVGS--DTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQ 601

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +     L P ++ G +   + +STG HH+ A+  DG L+ WG N  GQLGLG  + 
Sbjct: 602 LGLGD-TSDRLSPEQVGG-ESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSD 659

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+    +     +   +A G+ +++AV   G + +WG   +G+LG G          
Sbjct: 660 RHAPVQVGSDT---DWAAVSASGY-RTLAVKADGTLWAWGENNNGQLGLGD--------- 706

Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           + +  TP  +    G     AA   G  H+    E+  ++ +G     ++   + ++   
Sbjct: 707 TDNRNTPAQV----GNDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDA 762

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           P  +        V  GGYHT    S G L  WG N +G LG  ++     P+ V G
Sbjct: 763 PVQVGNETDWSTVSGGGYHTLATMSDGTLRAWGLNTSGQLGQRTM-WFDQPQEVPG 817


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 166/352 (47%), Gaps = 21/352 (5%)

Query: 19  KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
           +LG+    C  + S     +   +WG GD GRLG+ +  ++++P V    ++  ++  + 
Sbjct: 85  RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           GG H + LTE G VY  G   FG LG        L  L     K  +V +S G  HS+A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAV 202

Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           T  GELY WG++   G+LG G         +  PTKV+ L          GF  ++A+T 
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGF-FTMALTK 261

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ SWG   +  LGHG  +         + + P+++  LE V +   A G  H+A + 
Sbjct: 262 SGQLWSWGGNANHELGHGTRA---------NNWKPKVVAALEDVTLVQVACGGFHAAALT 312

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTW 312
           ++G+V  +G     ++      + + P+++  +       + CG   T  +T  G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372

Query: 313 GSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G N +  LGI G  D    P  VQ  F ++  ++    ++ VSCG  H   I
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQ--FPQALHEKTPVEVLGVSCGANHGVCI 422



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 182/412 (44%), Gaps = 65/412 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
           WG G +G++G GS ++   PV+ S  +  +   +A                  CG  H++
Sbjct: 40  WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
              E   V+  G  D G+LGI        +P  ++   K V   S G  H+ A+T  G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
           Y WG  + G LG G    +++P       L G +  +    + G   S AVT  G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHSAAVTESGELYTW 211

Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           G   G GRLGHG        +   +   P  ++ L+     +   GF  +  + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALDVPIASVYCGGFF-TMALTKSGQLW 266

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +G  A  ++      +  +P +++ L      +V CGG+H   LT  G++ TWG   NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSH 377
            LG G+++    P  V     E+  D+ CT I   +CG   TAAI+E G + TWG    +
Sbjct: 327 QLGHGTLENGKEPAIV-----EAMADKTCTYI---ACGPAWTAAITENGDLYTWGKNRDY 378

Query: 378 GTFSEDGHSSGGQLG-HGNDVDYIHPTIVNFGE------NVKALQVSCGFNH 422
                       QLG  G   + + P +V F +       V+ L VSCG NH
Sbjct: 379 ------------QLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANH 418



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 149/317 (47%), Gaps = 54/317 (17%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
           SS    + E++ WG+ ++GQ+G G +  + +P+     K+   +G+   Q  +  +    
Sbjct: 28  SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87

Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +V VT G           V  WG G  GRLG   E          ++Y P +   ++  +
Sbjct: 88  NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVV-- 294
           V++A+AG LH+  + E G VY +G  A   +    G+ +    L+ +L   P+ + +V  
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GHGSYERELLPRLLEGPWKDRIVHV 192

Query: 295 -CGGYHTCVLTSGGELYTWGSNE-NGCLGIGSIDVLHSPERVQGPFSE-SPVDQICTSIV 351
             GG H+  +T  GELYTWG +E  G LG G+ D++      +G  S  + V  +   I 
Sbjct: 193 SAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMD-----EGALSRPTKVQALDVPIA 247

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            V CG   T A+++   L W WGG+          +  +LGHG   +   P +V   E+V
Sbjct: 248 SVYCGGFFTMALTKSGQL-WSWGGN----------ANHELGHGTRANNWKPKVVAALEDV 296

Query: 412 KALQVSCGFNHTGALLE 428
             +QV+CG  H  AL +
Sbjct: 297 TLVQVACGGFHAAALTQ 313


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 171/351 (48%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +    AG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKNGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VTAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT+ G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 176/381 (46%), Gaps = 39/381 (10%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           ST+  +    WG+  +G LGLG +E      P      +   ++ +ACG  +T+ +T  G
Sbjct: 71  STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
            VY+ G ND+GQLG  E     L+   I GL   V  +++ G HH+ A+   G+L+ WG 
Sbjct: 131 QVYSCGNNDYGQLG-HEKGRKRLQ--LIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGS 187

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N+ GQLGL  K   +  +P  V  L      Q A G    +A+T  GK+ SWG+   G+L
Sbjct: 188 NAEGQLGLNSKNL-IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQL 246

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G +          +E  P+LI  L GV +     G  HS  I ++G V+ +G     +
Sbjct: 247 GLGTDVK--------NEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   +  +   P  +  L  ++     CG   +  LT  G ++T G+   G LG G+   
Sbjct: 299 LGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSN 358

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGH 385
              P +V        ++ + +++  +SCG +HT  +  S G++  WG GG+         
Sbjct: 359 EILPRQV--------MELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA--------- 401

Query: 386 SSGGQLGHGNDVDYIHPTIVN 406
              GQLG+        P +V+
Sbjct: 402 ---GQLGNNITRSVATPQVVH 419



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 139/298 (46%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K +ACG  HTL + E G +++ G N  GQL
Sbjct: 136 GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQL 193

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    VVQ++ G +H  A+T +G+LY WG NS+GQLGLG    
Sbjct: 194 GLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVK 253

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P  +  L+G+       G   S+A++  G V  WG    G+LG            
Sbjct: 254 NEIK-PKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLND--------- 303

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   PR ++ L+  KV  AA G   S  +  +G V+  G     ++     ++   P 
Sbjct: 304 TRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPR 363

Query: 283 LISKLPYS--EEVVCGGYHTC-VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   ++ CG  HT  ++ S G +Y WG    G LG      + +P+ V GP
Sbjct: 364 QVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVVHGP 421



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 50/339 (14%)

Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG+     ENI   L P  +   K  E+ QI+ G +++  IT DG++Y  G N  GQL
Sbjct: 87  GELGLGGIEDENI---LVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQL 143

Query: 156 G--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           G   G+K  ++IP       L     K+ A G   ++AV   G++ SWG+   G+LG   
Sbjct: 144 GHEKGRKRLQLIP------GLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNS 197

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
           ++ I        E  P +++ L    V   A G  H   +  NG++Y +G  +  ++ L 
Sbjct: 198 KNLI--------ECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLG 249

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
            +  +  +P LIS L   P +  + CGGYH+  ++  G ++ WG N  G LG+      +
Sbjct: 250 TDVKNEIKPKLISSLAGVPIAF-ITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRN 308

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 388
            P ++Q   +     ++C +    +CG + +  ++ +G + T G G              
Sbjct: 309 LPRQLQTLQNA----KVCYA----ACGEEFSVFLTVDGGVFTCGAGMY------------ 348

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GQLGHGN  + I P  V         Q+SCG  HT  L+
Sbjct: 349 GQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLV 387



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 34/283 (12%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           D  ++ WG   +G+LGLG    + I +P +++       +Q A G   +V +T  G+V S
Sbjct: 75  DKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYS 134

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            G    G+LGH +    L           +LI  L+    K  A G  H+  ++E G+++
Sbjct: 135 CGNNDYGQLGHEKGRKRL-----------QLIPGLDAFVFKKVACGAHHTLAVNEWGQLF 183

Query: 261 IFGDRAVDKMLFQEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
            +G  A  ++     N     P ++  L  S   +V CG  H   LT+ G+LY+WGSN +
Sbjct: 184 SWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSD 243

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISEGKILTWGWGGS 376
           G LG+G+         V+       +  +    I  ++CG  H+ AIS+   + +GWG +
Sbjct: 244 GQLGLGT--------DVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAV-FGWGKN 294

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TF        GQLG  +  +   P  +   +N K    +CG
Sbjct: 295 --TF--------GQLGLNDTRNRNLPRQLQTLQNAKVCYAACG 327


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 172/351 (49%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      ++K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS ++ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTSLQGIVAEP-QVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 160/342 (46%), Gaps = 27/342 (7%)

Query: 43  WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WGN   G+LG+G  ++  + P  C  F    LK + CGG H++FL   G VY  G N  G
Sbjct: 4   WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  +  G S  P  +  L  +++  +S G  HS A+   G+L+ WG    GQLGLG  
Sbjct: 64  QLG-HDKAGIS--PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTT 120

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              V  IP  V+ L      Q   G +  VA++  G++ +WG   SG+LG G+       
Sbjct: 121 ETTV-RIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEP---- 175

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S+  P  +K L G+ +    AG  HS  +  +G V+ +G     ++   +      
Sbjct: 176 ----SKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAV 231

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I K   S++VV   CG  HT  LT  G L+T+G    G LG GS +    P RV   
Sbjct: 232 PCHI-KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRV--- 287

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG-GSHG 378
                ++ + T +  ++CG  HT A      + + +G  SHG
Sbjct: 288 -----LELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHG 324



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 146/337 (43%), Gaps = 47/337 (13%)

Query: 101 GQLGISENIGYSLEPLRI-----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GQLGI        EP         GLK    ++  G  HS  +  DG +Y  G NS GQL
Sbjct: 10  GQLGIGVEKNPVFEPRNCHVFSGRGLK----EVGCGGQHSVFLMHDGSVYTCGSNSCGQL 65

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  K        P  V  L        + G   S+AV   G++ +WGAG  G+LG G   
Sbjct: 66  GHDKAGIS----PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                   T+   PRL+K L   ++     G  H   +  +G+++ +G     ++   +G
Sbjct: 122 --------TTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKG 173

Query: 276 NHARR-PSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
             ++  P  +  L   P ++ +  GG H+  L+  G ++ WG N  G LG+        P
Sbjct: 174 EPSKLFPHPLKSLAGIPLAQ-ITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP 232

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
             ++   S+         +V +SCG +HTAA++ +G + T+G G            S GQ
Sbjct: 233 CHIKFLRSQK--------VVYISCGDEHTAALTKDGGLFTFGDG------------SWGQ 272

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGHG+    + P  V      +  Q++CG +HT A +
Sbjct: 273 LGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFV 309



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 37/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG   +GQLG+G +   V   P      SG   K+   G + SV +   G V + G+   
Sbjct: 4   WGNAKDGQLGIGVEKNPVFE-PRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSC 62

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +  +P ++  L+  K+ + + G  HS  ++E G+++ +G   
Sbjct: 63  GQLGHDK-----------AGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGD 111

Query: 267 VDKM-LFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P L+ +L      +V+CG  H   L+  G+L+TWG N +G LG+G
Sbjct: 112 GGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLG 171

Query: 324 SIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
             +    P ++       P+  +    +  ++ G  H+ A+S  G +  WG         
Sbjct: 172 KGE----PSKL----FPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWG--------- 214

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               +  GQLG  +  D   P  + F  + K + +SCG  HT AL
Sbjct: 215 ---KNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAAL 256



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 3/138 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL   + R  P          +  ++CG  HT  LT+ G ++  G   +GQ
Sbjct: 213 WGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQ 272

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    L P R+  L   EV QI+ G HH+ A +   G +Y +G NS+GQLG G  
Sbjct: 273 LG-HGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGIL 331

Query: 161 AAKVIPIPTKVECLSGIF 178
                P P K    S  F
Sbjct: 332 GDARSPFPVKTSVPSEDF 349


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 181/394 (45%), Gaps = 43/394 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P +C +  + +  A+  GG  TLF +T+ G VYA+G    G
Sbjct: 3839 WGHNHRGQLGGIEGNKVKSPRLCESLSELN-PAMITGGEQTLFAVTDDGKVYASGYAAHG 3897

Query: 102  QLGI--SENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI  S+N+     L  L   G+  + + I +G  H  A+T  GELY WG+  +G+LGL
Sbjct: 3898 RLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGL 3957

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G      + +P  +E L       A  G   S  +T  G + +WG G  GRLGH      
Sbjct: 3958 GTTVN--MNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHE-- 4013

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                   +++ P+L+  L+G +V   A  +G   + C   +G V+ +GD    K L + G
Sbjct: 4014 -------TQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGK-LGRGG 4065

Query: 276  NH-ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            N  ++ P  I  L   +  +++CG   +  LT+ G +YTWG  +   LG G      +P 
Sbjct: 4066 NEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPR 4125

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            RV G  +         +++ + CG  H    +E GK+ +W            G +  GQ+
Sbjct: 4126 RVLGLLAHE-------NVIDIGCGSLHCIVCTESGKVFSW------------GDNDEGQI 4166

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G+        P  +N  +N+    V+CG  H+ A
Sbjct: 4167 GNDTTQAVSVPKRINITDNICIDHVACGSAHSIA 4200



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 184/395 (46%), Gaps = 40/395 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            +WG  D  +LG    E++ + P+      +      A G   +  +++ G V+A G    
Sbjct: 2928 VWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSS 2987

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI       + P +IS L   VV+   +S    H  A+T DG+++ WG    GQLG 
Sbjct: 2988 GRLGIGGFANIRM-PHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH 3046

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G  + +    P  +E       ++ + G   S AV+  G++ +WG G  GRLGHG     
Sbjct: 3047 G--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGD---- 3100

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGN 276
                 S ++  P+L++ LE V++   A G  ++  +   +  ++ +GD +  K+  ++G+
Sbjct: 3101 -----SNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGS 3155

Query: 277  HARR-PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +   P  +   P +  ++ CG + + +LT  G++YTWG  E   LG  S  V   P  V
Sbjct: 3156 SSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLV 3215

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
             G  S+        +I  V+ G  H  A+ S G++ +WG         ++ H   GQ G+
Sbjct: 3216 DGLASK--------TITQVAVGALHCLALTSSGEVYSWG---------DNEH---GQQGN 3255

Query: 394  GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             + +    P IV   +  +  +++CG +H+ A  +
Sbjct: 3256 NSTICNRKPQIVASLKGHRICKIACGSSHSIAFAQ 3290



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 156/360 (43%), Gaps = 25/360 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G   +   P   S+   + ++  A++C G H L +T  G V++ G   +G
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYG 3042

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QLG      Y    +      K + ++S G  HS+A++V+GEL+ WG+ ++G+LG G   
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSN 3102

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILGF 220
             +  P    V  L  +     A G   +  +  G   L +WG G  G+LG    SS    
Sbjct: 3103 NQTKP--KLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSS---- 3156

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                S   P  +       ++I   G   S  + + G+VY +G     ++     +    
Sbjct: 3157 ----STDVPVQVITFPSNIIQIEC-GMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPI 3211

Query: 281  PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P+L+  L      +V  G  H   LTS GE+Y+WG NE+G  G  S      P+ V    
Sbjct: 3212 PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLK 3271

Query: 339  SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                  +IC     ++CG  H+ A ++G  LT     S  +FS      G  + HG   D
Sbjct: 3272 GH----RICK----IACGSSHSIAFAQGS-LTTAVKFSPISFSNSKDPLGASIVHGKSSD 3322



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 157/350 (44%), Gaps = 54/350 (15%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
            V+  GLND  QLG   +      P+    L +   +Q + G   S  ++ DG+++  G+ 
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGR 208
            S+G+LG+G  A   I +P ++  LS    ++ A+       +AVT  GKV SWG G  G+
Sbjct: 2986 SSGRLGIGGFAN--IRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG   S+  + R      P++I+  +   ++  + G  HSA +  NG ++ +G  A  
Sbjct: 3044 LGHG---SLQSYDR------PKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADG 3094

Query: 269  KMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSG-GELYTWGSNENGCLGI--- 322
            ++   + N+  +P L+  L       V CG  +   L +G   L+ WG    G LG+   
Sbjct: 3095 RLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDG 3154

Query: 323  -GSIDVLHSPERVQGPFSESPVDQIC--TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
              S DV              PV  I   ++I+ + CG   +  ++ EGK+ TWG G  + 
Sbjct: 3155 SSSTDV--------------PVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYR 3200

Query: 379  TFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGAL 426
                           GND   +   PT+V+   +    QV+ G  H  AL
Sbjct: 3201 L--------------GNDSTSVQPIPTLVDGLASKTITQVAVGALHCLAL 3236



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 23/265 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
           G H L LT+ G VY+ G    G LGI  N      P  ++ L    +V IS G  HS+A+
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIG-NTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
           T DG LY WGK S G+LG G    K+  IPT VE L+G+   Q   G     ++A+   G
Sbjct: 576 TEDGVLYTWGKGSYGRLGHGNAEDKL--IPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 197 KVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           +V SWG G  G+LG  G + + +    S    T  ++K + G ++ +A         + +
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMA---------LTK 684

Query: 256 NGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
           +G++Y +G    D      GN  H R+P LI  L  +   +V  G  H   LT+  ++Y 
Sbjct: 685 DGKLYSWG--CGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYA 742

Query: 312 WGSNENGCLGIGSIDVLHSPERVQG 336
           WG N +  +   S D++ SP  ++ 
Sbjct: 743 WGKNSSFEVN-ESGDIISSPLMIEA 766



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 26/273 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+G YG+LG GSL+S  RP +   F+   ++ ++CG  H+  ++  G ++  G    G+
Sbjct: 3036 WGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGR 3095

Query: 103  LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
            LG  ++   + +P  +  L+K  +  ++ G  ++  +   D  L+ WG  S G+LGL K 
Sbjct: 3096 LGHGDSNNQT-KPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGL-KD 3153

Query: 161  AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    +P +V    S I   +  + F  SV +T  GKV +WG G   RLG+   S    
Sbjct: 3154 GSSSTDVPVQVITFPSNIIQIECGMHF--SVLLTKEGKVYTWGKGEYYRLGNDSTS---- 3207

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                  +  P L+  L    +   A G LH   +  +G VY +GD        Q+GN++ 
Sbjct: 3208 -----VQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHG----QQGNNST 3258

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTSG 306
               R+P +++ L      ++ CG  H+     G
Sbjct: 3259 ICNRKPQIVASLKGHRICKIACGSSHSIAFAQG 3291



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 155/351 (44%), Gaps = 43/351 (12%)

Query: 83   TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITV 140
            TL    T  V+  G N  GQLG  E  G  ++  R+     E+    I+ G     A+T 
Sbjct: 3827 TLPTGSTFSVFGWGHNHRGQLGGIE--GNKVKSPRLCESLSELNPAMITGGEQTLFAVTD 3884

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            DG++Y  G  ++G+LG+G       P P       GI  K+ A+  G +  +AVT  G++
Sbjct: 3885 DGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGEL 3944

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             +WG G  G+LG G          + +   P LI+ L+   V  A  G  HSACI ++G 
Sbjct: 3945 YAWGEGEDGKLGLGT---------TVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGS 3995

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC-----GGYHTCVLTSGGELYTWG 313
            +Y +G     ++   +     +P L+S L   E+V C     G   T   T+ G +++WG
Sbjct: 3996 LYTWGKGRYGRLGHNDHETQHKPKLVSAL-KGEQVTCVACGSGDAQTLCATASGCVFSWG 4054

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
              + G LG G  +    P+++     +         ++ + CG + + A++  G + TWG
Sbjct: 4055 DGDYGKLGRGGNEGSKVPKKIDSLTGK--------HVIKLLCGSQFSMALTTAGHVYTWG 4106

Query: 373  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQVSCGFNH 422
             G  +            +LGHG+D     P  ++    +   + + CG  H
Sbjct: 4107 KGDYY------------RLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLH 4145



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G LG+G+ ES+  P   +A     +  ++ G  H+  +TE G +Y  G   +G+
Sbjct: 532 WGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGR 591

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N    L P  + GL   ++VQ+   +G  H+ A+   G+++ WG    G+LG   
Sbjct: 592 LG-HGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPG 650

Query: 160 KAAKVIPIPTKVECLSGIFTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                +P P     +SGI +    +    G + S+A+T  GK+ SWG G + +LGHG + 
Sbjct: 651 SDQNKVPKP-----ISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQE 705

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+LI+ L    V   + G  H   +  +  VY +G
Sbjct: 706 HV---------RQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 33/290 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
             ++++WG N   QLG     AKV   P +   L+ +   Q A G + S  V+  GKV + 
Sbjct: 2924 NKVFVWGLNDMRQLGTDLSEAKV-KSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982

Query: 202  GAGGSGRLGHGQESSIL--GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            G G SGRLG G  ++I     + S S Y  R        KV ++ AG  H   +  +G+V
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVR--------KVAVSCAG-RHVLAVTADGKV 3033

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +GD    ++         RP +I   +  +  EV CG  H+  ++  GEL+TWG   +
Sbjct: 3034 FSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGAD 3093

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P+ V+       ++++   I  V+CG ++   ++ G    W WG   
Sbjct: 3094 GRLGHGDSNNQTKPKLVRA------LEKV--RISCVACGSRNAHTLAAGDNSLWAWGD-- 3143

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            G+F + G      L  G+    +   ++ F  N+  +Q+ CG  H   LL
Sbjct: 3144 GSFGKLG------LKDGSSSTDVPVQVITFPSNI--IQIECGM-HFSVLL 3184



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 33/242 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  GKV SWG G +G LG G          + S+  P  +  L G ++   +AG +H
Sbjct: 521 LALTKDGKVYSWGQGSNGVLGIGN---------TESQTAPTAVAALSGDRIVHISAGSMH 571

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTS 305
           SA + E+G +Y +G  +  ++          P+++  L   +  +V CG    HT  L  
Sbjct: 572 SAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD 631

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G++++WG  + G LG    D    P+ + G  S SPV       V + CG + + A++ 
Sbjct: 632 TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPV-------VKIICGNQISMALTK 684

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +GK+ +WG G ++            QLGHGN      P ++          VS G  H  
Sbjct: 685 DGKLYSWGCGDTY------------QLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCV 732

Query: 425 AL 426
           AL
Sbjct: 733 AL 734



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 7/161 (4%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG+GDYG+LG G  E    P    +   KH +K L CG   ++ LT  G VY  G  D+ 
Sbjct: 4053 WGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIK-LLCGSQFSMALTTAGHVYTWGKGDYY 4111

Query: 102  QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            +LG  ++  +   P R+ GL   + V+ I  G  H    T  G+++ WG N  GQ  +G 
Sbjct: 4112 RLGHGDD-SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQ--IGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
               + + +P ++     I     A G   S+A +   + LS
Sbjct: 4169 DTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRNLS 4209



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 96/219 (43%), Gaps = 53/219 (24%)

Query: 225 SEYTPRLIKELEGVKVKIAAAGFL----HSACIDENGRVYI-----FGDRAVDKMLFQEG 275
           SE  P +I +   + ++I A  F     H   +  +G V+       GD  V+++ F   
Sbjct: 447 SEGGPSII-QTSNILLEIGAKEFYSSPKHRVVLTVHGTVFYVMDASMGDFTVEQLFF--- 502

Query: 276 NHARRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                       P  EE++       G H   LT  G++Y+WG   NG LGIG+ +   +
Sbjct: 503 ------------PGDEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTA 550

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGG 389
           P  V     +         IV +S G  H+AA++E  +L TWG G            S G
Sbjct: 551 PTAVAALSGDR--------IVHISAGSMHSAAVTEDGVLYTWGKG------------SYG 590

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGF--NHTGAL 426
           +LGHGN  D + PTIV     VK +QV CG    HT AL
Sbjct: 591 RLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLAL 629



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 19/158 (12%)

Query: 274  EGNHARRPSLISKL-PYSEEVVCGGYHTC-VLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EGN  + P L   L   +  ++ GG  T   +T  G++Y  G   +G LGIGS D + +P
Sbjct: 3851 EGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATP 3910

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
                 P +      I    + +  G KH  A++ +G++  WG G       EDG     +
Sbjct: 3911 T----PLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEG-------EDG-----K 3954

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            LG G  V+   P ++   ++   +   CG +H+  + +
Sbjct: 3955 LGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITD 3992


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  132 bits (331), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 109/354 (30%), Positives = 168/354 (47%), Gaps = 41/354 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           ++CG +H+ F+TE G ++  G N+ GQLG+    G   +P+ +  LK E  Q ++ G  H
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIK-GPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   T  GE+   G NS+GQLGLG     +     +  C      K  + G   S A+T 
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI-KLLSAGDHTSAALTE 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
            G++  WG   +G+LG G +S  L            L KEL  G  +   + G+ HSA +
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHAL------------LPKELNMGQSIHWVSCGYRHSALV 204

Query: 254 DENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            ++G VY FG+ A  ++     Q  NH+  P  +  L    +V CGG HT  LT   ELY
Sbjct: 205 TDSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLHSVLQVACGGKHTLALTED-ELY 262

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            +G  E G LG+G++  +       G F +  V         V+CG +H+A I++  +L 
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTH-------VTCGEQHSALITDSGLLY 315

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNH 422
                   TF +  H   G+LGHG++   +   PT+         + V+CG +H
Sbjct: 316 --------TFGDGRH---GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358



 Score =  124 bits (312), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 51/349 (14%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + +TG V+      FG+  I+ N+     P R+  LK ++ V IS G  HS+ +T  G L
Sbjct: 7   IPDTGAVFT-----FGKSKIANNV-----PSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +++G N+ GQLGL  K     P+  KV  L G   +  A G + ++  T  G++L+ G  
Sbjct: 56  FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113

Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G+LG G  +  + F  LR   +Y P          +K+ +AG   SA + E+GR++++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLW 163

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           GD +  ++ F   +HA  P  ++       V CG  H+ ++T  G++Y++G + +G LG+
Sbjct: 164 GDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGL 223

Query: 323 GSIDVL-HS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTF 380
            +  +  HS P+RV+             S++ V+CG KHT A++E ++  +G G      
Sbjct: 224 SAHQLANHSYPQRVES----------LHSVLQVACGGKHTLALTEDELYCFGGG------ 267

Query: 381 SEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 428
                   GQLG G  V     P  V      +   V+CG  H+  + +
Sbjct: 268 ------EFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITD 310



 Score =  112 bits (281), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 101/359 (28%), Positives = 158/359 (44%), Gaps = 36/359 (10%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           ++ +LK DI +    G       +   R F  ++G+ + G+LGL       +PV     +
Sbjct: 27  SRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVKVLK 84

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
               +++ACG  HTL  T  G + A G N  GQLG+   N   S + LR       +  +
Sbjct: 85  GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G H S+A+T DG L++WG NS GQLG G  +  ++P     E   G      + G+  
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----KELNMGQSIHWVSCGYRH 200

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G V S+G    GRLG       L   +  +   P+ ++ L  V +++A  G  
Sbjct: 201 SALVTDSGDVYSFGESADGRLG-------LSAHQLANHSYPQRVESLHSV-LQVACGG-K 251

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E+  +Y      FG   +  ++F     A  P  +          V CG  H+ 
Sbjct: 252 HTLALTED-ELYCFGGGEFGQLGLGTLVFV----ADSPVAVGHFRKGRVTHVTCGEQHSA 306

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-SIVLVSCGWKH 359
           ++T  G LYT+G   +G LG       H  E     F+ +   +    S++ V+CG  H
Sbjct: 307 LITDSGLLYTFGDGRHGKLG-------HGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G V++ G    GQ+
Sbjct: 43  GCNDLGQLGHD--KSRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 100

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ + ++Y WG+N  GQLGLG +  
Sbjct: 101 GLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK 160

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L+GI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 161 KE-SAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDE-------- 211

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     NH   P 
Sbjct: 212 -TDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 270

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 271 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 327



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 168/355 (47%), Gaps = 39/355 (10%)

Query: 57  ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
           E    P  C  F   +++ + CG  HT+F+ + G VY  G ND GQLG  ++     +P 
Sbjct: 4   EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS---RKKPD 60

Query: 117 RISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           ++  L  + +V +S G  H+ A+   G+++ WG  ++GQ+GL   A   I +P  ++ L 
Sbjct: 61  QVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLS-VAEDYIRVPRNIKSLY 119

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
            I   Q A G   S+A++    + SWG    G+LG G E           E  PR IK L
Sbjct: 120 DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK--------KESAPRHIKSL 171

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
            G+     AAG  HS  +  +G ++ +G     ++   +      P+L+  L  S++++ 
Sbjct: 172 AGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSL-RSQKIIH 230

Query: 295 --CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
             CG  HT  LT  G ++T+G+   G LG  S +   +P +V         + + + +  
Sbjct: 231 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--------FELMGSIVTQ 282

Query: 353 VSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           ++CG +HT A   S G+I ++G GG+            GQLG G+  +   P  V
Sbjct: 283 IACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKSPFTV 325



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLGS ++    P    +        +A GG H+  LT +G ++  G N FG
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFG 204

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++    S   L  S   ++++ I  G  H++A+T +G ++ +G    GQLG     
Sbjct: 205 QLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 264

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            +V   P KV  L G    Q A G + ++A V   G++ S+G GG+G+LG G  S+
Sbjct: 265 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSN 318



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 46/274 (16%)

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +V+  P + +       +    G   +V V   G V + G    G+LGH +         
Sbjct: 4   EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDK--------- 54

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRP 281
             S   P  +  L+   +   + G  H+  +++ G+V+ +G  A  ++ L    ++ R P
Sbjct: 55  --SRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVP 112

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQG- 336
             I  L Y  ++V   CG +H+  L+   ++Y+WG N+ G LG+GS I    +P  ++  
Sbjct: 113 RNIKSL-YDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL 171

Query: 337 ---PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 392
              PF+             ++ G  H+ A++  G I  WG             +  GQLG
Sbjct: 172 AGIPFAH------------IAAGGGHSFALTMSGAIFGWG------------RNKFGQLG 207

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             ++ D   P ++    + K + + CG +HT AL
Sbjct: 208 LNDETDRSAPALLKSLRSQKIIHICCGEDHTAAL 241


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 163/328 (49%), Gaps = 26/328 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD GRLG G    ++ P +  +     +  + CG  HT  ++  G ++  G   +G+
Sbjct: 31  WGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGK 90

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG     G+S  P R+  L    VV I+ G  H++ +T  G LY WG   NG  G G   
Sbjct: 91  LGHGNESGHS-TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTE 149

Query: 162 AKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 P  +E LSG    Q +A GF     +T  G+V +WG G  GRLGHG E +    
Sbjct: 150 GHQY-TPKLLERLSGKRVVQLSACGFHTG-CLTDAGEVYTWGEGKFGRLGHGAERNC--- 204

Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 ++PRL++ L G + V+I+  GF HSA +  +G++Y FG     ++   +  +  
Sbjct: 205 ------HSPRLVETLLGKRPVQISCGGF-HSAVVTADGKMYTFGGGEHGQLGHGDKVNKV 257

Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           +P+L+  L   +  ++ CG  H+  LTS  E+YTWG+ ++G LG G    + +P+ V   
Sbjct: 258 KPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLV--- 314

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISE 365
             E  V Q    +V V+   +HTA + E
Sbjct: 315 --EKLVGQ---KVVCVASYNEHTACLVE 337



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 143/290 (49%), Gaps = 37/290 (12%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G +Y WG+  +G+LG G    K +P  T    L+G        G   + AV+  G + +W
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLT--HSLAGQVITHVTCGSYHTAAVSSKGNLFTW 83

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G  G+LGHG ES            TP+ +  L G+ V   A G  H+A +   G +Y 
Sbjct: 84  GGGMYGKLGHGNESG---------HSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYT 134

Query: 262 FGDR--AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           +GD+   V      EG H   P L+ +L      ++   G+HT  LT  GE+YTWG  + 
Sbjct: 135 WGDKENGVAGHGDTEG-HQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKF 193

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G LG G+    HSP  V+    + PV         +SCG  H+A ++ +GK+ T+G GG 
Sbjct: 194 GRLGHGAERNCHSPRLVETLLGKRPVQ--------ISCGGFHSAVVTADGKMYTFG-GGE 244

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           HG           QLGHG+ V+ + PT+V   + V   Q++CG++H+ AL
Sbjct: 245 HG-----------QLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVAL 283



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 164/347 (47%), Gaps = 37/347 (10%)

Query: 87  TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELY 145
           T  G VY  G  D G+LG  +N G+   P     L  +V+  ++ G +H++A++  G L+
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDN-GWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLF 81

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            WG    G+LG G ++      P +V+ L G+     A G   +  VT  G + +WG   
Sbjct: 82  TWGGGMYGKLGHGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGD 264
           +G  GHG             +YTP+L++ L G +V +++A GF H+ C+ + G VY +G+
Sbjct: 140 NGVAGHGDTEG--------HQYTPKLLERLSGKRVVQLSACGF-HTGCLTDAGEVYTWGE 190

Query: 265 RAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               ++      +   P L+  L      ++ CGG+H+ V+T+ G++YT+G  E+G LG 
Sbjct: 191 GKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH 250

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 381
           G       P  V+        D     +  ++CGW H+ A+ S  ++ TWG  G H    
Sbjct: 251 GDKVNKVKPTLVK--------DLDGVFLTQITCGWSHSVALTSSHEVYTWG-NGDH---- 297

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                  G+LGHG       P +V      K + V+    HT  L+E
Sbjct: 298 -------GKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 172/394 (43%), Gaps = 67/394 (17%)

Query: 43  WGNGDYGRLGLGSLESRW----RPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYA 94
           WGN   G+LGL            P    AF   S+     A+ACG AHTLFL + G VY+
Sbjct: 88  WGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD-GQVYS 146

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            G ND GQLG  +   +  +P R+  L+   + QI+ G  HS A+T +G+++ WG N   
Sbjct: 147 CGSNDQGQLGHKK---HRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKAS 203

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGL    +   P                      S   T    +       +  L +  
Sbjct: 204 QLGLTPSESSRQP------------------STRSSAPKTAAASIDDVDELDAATLAY-- 243

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
               + F+       PRL++ L G K+     G   S  + E G V+ +GD    ++  +
Sbjct: 244 ----MDFMTR-----PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLR 294

Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           E      P+L+ +L   P   ++  GG HT  LT  G++Y+WG+N+ G LG+G       
Sbjct: 295 ELKTVPVPTLVKELYGIPI-RQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTI 353

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P R++     +   Q C  I   +CG  H+  ++E G + ++G GG             G
Sbjct: 354 PSRLK-----TLEHQFCAHI---ACGEDHSVVLTETGGVYSFGAGGQ------------G 393

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           QLGHG   + I+P ++       A QV CG  HT
Sbjct: 394 QLGHGTLQNEINPRMIFELMGKSASQVLCGRRHT 427



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 22/217 (10%)

Query: 53  LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
           L  ++   RP +  A   H +  + CG   +L L+E G V+A G N  GQL + E     
Sbjct: 241 LAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRE----- 295

Query: 113 LEPLRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
           L+ + +  L KE     + Q++ G  H+ A+T +G++Y WG N  GQLG+G  A     I
Sbjct: 296 LKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHT--I 353

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P++++ L   F    A G + SV +T  G V S+GAGG G+LGHG            +E 
Sbjct: 354 PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ---------NEI 404

Query: 228 TPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFG 263
            PR+I EL G        G  H+     +  ++Y FG
Sbjct: 405 NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFG 441



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 10/213 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+L L  L++   P +        ++ LA GG HTL LT  G VY+ G N FGQ
Sbjct: 283 WGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQ 342

Query: 103 LGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +   +++ P R+  L+ +    I+ G  HS  +T  G +Y +G    GQLG G   
Sbjct: 343 LGVGDTAPHTI-PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ 401

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            ++   P  +  L G    Q   G   ++       K+ ++G GG+G+LG G     +G 
Sbjct: 402 NEI--NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTG-----VGV 454

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
                  TP L++ L+   +   A G   S C 
Sbjct: 455 EPQQHVLTPMLVRVLDATPILRIATGASASHCF 487


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 154/299 (51%), Gaps = 32/299 (10%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3649

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3650 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3708

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K +P             ++ A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 3709 TSNKKLP-------------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3750

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 3751 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3806

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V
Sbjct: 3807 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 3864



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 545 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 711 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 23/246 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 3644 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3703

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKKA 161
            LG+                KK   +++ G +H+ A++ DG + + +G    G+LGLG   
Sbjct: 3704 LGLGNTSN-----------KKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3752

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G         
Sbjct: 3753 AKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG--------- 3801

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R P
Sbjct: 3802 RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 3861

Query: 282  SLISKL 287
            +L++ L
Sbjct: 3862 TLVTVL 3867



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 420

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 480

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 481 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 531

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 532 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 591

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 592 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 647

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 648 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 707

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 708 KKVSGLDGIAIQQISAGTSHSLA 730



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 50/315 (15%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3511 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3566

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3567 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3616

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 3617 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3675

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PER                  
Sbjct: 3676 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER------------------ 3717

Query: 352  LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 3718 -VACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 3766

Query: 412  KALQVSCGFNHTGAL 426
               +V+CG   + AL
Sbjct: 3767 GIKKVACGTQFSVAL 3781



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 156/347 (44%), Gaps = 79/347 (22%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
            Q+  G + +  I  +G +   G+ S G+LG G   +  + + T +  L G    Q   + 
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 3626

Query: 185  GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G +  S+A+T  G+V SWG G  G+LGHG          S  +  PR I+ L+G +V   
Sbjct: 3627 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 3677

Query: 244  AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            + GF HSA +  +G+++ FG+    ++    GN + +     KLP  E V CG  HT  +
Sbjct: 3678 SCGFKHSAVVTSDGKLFTFGNGDYGRLGL--GNTSNK-----KLP--ERVACGLNHTLAV 3728

Query: 304  TSGGEL-YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTA 361
            ++ G + + +G  + G LG+G+     SP++V         D +C   I  V+CG + + 
Sbjct: 3729 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV---------DVLCGIGIKKVACGTQFSV 3779

Query: 362  AIS-EGKILTWGW----------GGSH----------GTFSED----------------- 383
            A++ +G + T+G             +H          G   ED                 
Sbjct: 3780 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDV 3839

Query: 384  ---GHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
               G +S GQLG G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 3840 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 3884



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 366 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 425

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 480

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 481 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 170/351 (48%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG         +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN---KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G++          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 161/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HGREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 DFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 121/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGHG+E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHGREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KDFPSQASPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 161/334 (48%), Gaps = 28/334 (8%)

Query: 53  LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGY 111
           LG   ++++PV  SA E   +K +ACG  HTL +++ G V   G ND GQ G++  +I  
Sbjct: 69  LGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIEN 128

Query: 112 SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
              P  +  L   + V++  G  HS A+T DG L+ WG N+ GQLG+G         PT+
Sbjct: 129 KPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTE 188

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           +  L G+   + A G   S A+T  G V  WG    G+LG G +          ++  P 
Sbjct: 189 LTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKAYPT 239

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
           L++ +    VK  A G  H+A +  +G V++FG  +  ++      +   P  +  L  S
Sbjct: 240 LLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGS 299

Query: 291 E--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
           +  +V CG +HT VL  S G LY +G   +G LG        +P+RV GP+         
Sbjct: 300 DITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPW--------- 350

Query: 348 TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
              V  S   K+++  S+G+++   + G H  FS
Sbjct: 351 ---VPHSSTEKNSS--SKGRVVRCIYAGGHHCFS 379



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 160/335 (47%), Gaps = 41/335 (12%)

Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLGI    G + + +   ++ L  + VQ IS G HH+  +  DG LYM G NS GQLG 
Sbjct: 12  GQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ 71

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            +   K    P +V  L  +  K  A G + ++AV+  G+VL WG    G+ G       
Sbjct: 72  DRNQYK----PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCG------- 120

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
           L      ++  PR++K L   +      G LHS  +  +GR++ +GD    ++       
Sbjct: 121 LATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVT 180

Query: 276 NHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           N+  RP+ ++ L   P    V CGG+H+  LT  G ++ WG N+ G LG+G+ +    P 
Sbjct: 181 NYTDRPTELTSLRGVPLV-RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPT 239

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 391
            ++   S+         +  ++CG  HTA ++ +G +  +G G            S GQL
Sbjct: 240 LLRNMRSQ--------MVKHIACGQDHTAMLTADGGVFLFGQG------------SEGQL 279

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GHG++ + ++P  V         QV+CG +HT  L
Sbjct: 280 GHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 160/349 (45%), Gaps = 31/349 (8%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKK-EV 125
            E   +K +ACG  HTL +++   V   G ND GQ G++  +I     P  +  L   + 
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V++  G  HS A+T DG L+ WG N+ GQLG+G         PT++  L G+   + A G
Sbjct: 484 VKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 543

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S A+T  G V  WG    G+LG G +          ++  P L++ +    VK  A 
Sbjct: 544 GFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKSYPTLLRNMRSQMVKHIAC 594

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
           G  H+A +  +G V++FG  +  ++      +   P  +  L  S+  +V CG +HT VL
Sbjct: 595 GQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654

Query: 304 T-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
             S G LY +G   +G LG        +P+RV GP+            V  S   K+++ 
Sbjct: 655 EGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPW------------VPHSSTAKNSS- 701

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGG---QLGHGNDVDYIHPTIVNFG 408
            S+G+++   + G H  FS   +++      L   +   Y  PT +  G
Sbjct: 702 -SKGRVVRCIYAGGHHCFSTATNAADNPELPLDFRDPTPYQQPTCLTEG 749



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 27/349 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G+LG+G    +    V    +      +++++CG  HT  + + G +Y  G N 
Sbjct: 6   WGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANS 65

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG   N     +P+++S L+  V++ ++ G  H+ A++  G++  WG+N  GQ GL 
Sbjct: 66  KGQLGQDRN---QYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLA 122

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +  P P  ++ L+     +   G   S+A+T  G++ SWG    G+LG       +
Sbjct: 123 TGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLG-------I 175

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           G L +     P  +  L GV +   A G  HS  +  +G V+ +G   V ++      + 
Sbjct: 176 GTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENK 235

Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P+L+  +     + + CG  HT +LT+ G ++ +G    G LG GS     +P +V  
Sbjct: 236 AYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKV-- 293

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSED 383
                 +D + + I  V+CG  HT  +  S+G++  +G  G HG   +D
Sbjct: 294 ------IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ-GIHGQLGQD 335



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 177/408 (43%), Gaps = 46/408 (11%)

Query: 43  WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+ GL  G +E++ RP +      +    + CG  H++ LT  G +++ G N +
Sbjct: 111 WGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 170

Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           GQLGI   +  Y+  P  ++ L+   +V+++ G  HS A+T+ G ++ WGKN  GQLGLG
Sbjct: 171 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 230

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K  K    PT +  +     K  A G + +  +T  G V  +G G  G+LGHG      
Sbjct: 231 NKENKA--YPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 283

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIFGDRAVDKMLFQEGNH 277
               + +E  PR + +L G  +     G  H+  ++   GR+Y FG     ++   E   
Sbjct: 284 ----NYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 339

Query: 278 ARRPSLISK--LPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI--DV-- 327
              P  +    +P+S         G    C+   G   ++  +N    + I  +  D+  
Sbjct: 340 CSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDIST 399

Query: 328 -----LHSPERVQGPFSESPVDQICTSIVL--VSCGWKHTAAISEGKILTWGWGGSHGTF 380
                L                    ++V+  V+CG  HT A+S+ ++   GW       
Sbjct: 400 RIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSD-RVQVLGW------- 451

Query: 381 SEDGHSSGGQ--LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              G +  GQ  L  G+  +   P I+    + + ++V CG  H+ AL
Sbjct: 452 ---GRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMAL 496



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)

Query: 43  WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+ GL  G +E++ RP +      +    + CG  H++ LT  G +++ G N +
Sbjct: 451 WGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 510

Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           GQLGI   +  Y+  P  ++ L+   +V+++ G  HS A+T+ G ++ WGKN  GQLGLG
Sbjct: 511 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 570

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K  K    PT +  +     K  A G + +  +T  G V  +G G  G+LGHG      
Sbjct: 571 NKENK--SYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 623

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIFG 263
               + +E  PR + +L G  +     G  H+  ++   GR+Y FG
Sbjct: 624 ----NYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFG 665



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 175/414 (42%), Gaps = 58/414 (14%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-ETGCVYATGLNDF 100
           L+G G  G+LG GS  +   P          +  + CG  HTL L    G +YA G    
Sbjct: 270 LFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIH 329

Query: 101 GQLGISENIGYSLEPLRISGL-------------KKEVVQ-ISTGYHH--SSAITV--DG 142
           GQLG  E    S  P R+ G              K  VV+ I  G HH  S+A     D 
Sbjct: 330 GQLGQDEARSCS-NPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDI 388

Query: 143 ELYMWGKNSNG----QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           ++ +  ++ +     QL                  L  +  K  A G + ++AV+   +V
Sbjct: 389 QIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQV 448

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
           L WG    G+ G       L      ++  PR+++ L   +      G LHS  +  +GR
Sbjct: 449 LGWGRNDRGQCG-------LATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGR 501

Query: 259 VYIFGDRAVDKMLFQE--GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWG 313
           ++ +GD    ++       N+  RP+ ++ L   P    V CGG+H+  LT  G ++ WG
Sbjct: 502 LFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVR-VACGGFHSFALTISGSVFGWG 560

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWG 372
            N+ G LG+G+ +    P  ++   S+         +  ++CG  HTA ++ +G +  +G
Sbjct: 561 KNDVGQLGLGNKENKSYPTLLRNMRSQM--------VKHIACGQDHTAMLTADGGVFLFG 612

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G            S GQLGHG++ + ++P  V         QV+CG +HT  L
Sbjct: 613 QG------------SEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 11/193 (5%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  YG+LG+G+L + +  RP   ++     L  +ACGG H+  LT +G V+  G ND 
Sbjct: 505 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 564

Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLG+   EN  Y   P  +  ++ ++V+ I+ G  H++ +T DG ++++G+ S GQLG 
Sbjct: 565 GQLGLGNKENKSY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 621

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
           G    +V   P KV  L G    Q   G   ++ + G  G++ ++G G  G+LG  +  S
Sbjct: 622 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 679

Query: 217 ILGFLRSTSEYTP 229
                R    + P
Sbjct: 680 CSNPQRVPGPWVP 692



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 41/291 (14%)

Query: 145 YMWGKNSNGQLGLGKKAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           + WG +  GQLG+G    +    +  +V  LSG   +  + G   +  V   G +   GA
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG  +           ++Y P  +  LE V +K  A G  H+  + + G+V  +G
Sbjct: 64  NSKGQLGQDR-----------NQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWG 112

Query: 264 --DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
             DR    +   +  +  RP ++  L   +  +V CG  H+  LT  G L++WG N  G 
Sbjct: 113 RNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQ 172

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQIC---TSIVLVSCGWKHTAAIS-EGKILTWGWGG 375
           LGIG++            +++ P +        +V V+CG  H+ A++  G +  WG   
Sbjct: 173 LGIGTLVT---------NYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWG--- 220

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     +  GQLG GN  +  +PT++    +     ++CG +HT  L
Sbjct: 221 ---------KNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAML 262


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 173/370 (46%), Gaps = 36/370 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E      P      +   +  + CG +HTLFLT+ G +YA G ND 
Sbjct: 6   WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +   +  P R++ L+  ++  IS G  HS A+T  G+++ WG N+ GQLG   
Sbjct: 66  GQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDA 125

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +  P P  ++ +      Q A G    +A+T  G++ +WG+   G+LG G  S  + 
Sbjct: 126 ENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVP 184

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P LI+ L GV +   A G  HS  + ++G ++ +G     ++   + N   
Sbjct: 185 M--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRC 236

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       + CG   +  LT+ G ++T G+   G LG GS      P +V   
Sbjct: 237 YPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV--- 293

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                 + + + I  ++CG +HT A   S GKI  +G GG             GQLG G 
Sbjct: 294 -----FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGV------------GQLGIGM 336

Query: 396 DVDYIHPTIV 405
             ++  P IV
Sbjct: 337 VGNHSTPQIV 346



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 17/304 (5%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG  L +L ++ RP   ++ E + +  ++CG AH+L LT  G V++ G N  G
Sbjct: 61  GNNDHGQLGHDLDTLPNK-RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG     G    P  I  +  K VVQI++G +H  A+T +GELY WG NS GQLG+G  
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + KV P+PT ++ L+G+     A G   S AV+  G +  WG    G+LG    +     
Sbjct: 180 SEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 233

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  ++ L  + V+  + G   S  +   G V+  G     ++     ++   
Sbjct: 234 ----SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV 289

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  + +L  S+  ++ CG  HT     S G++Y +G    G LGIG +    +P+ V+GP
Sbjct: 290 PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVRGP 349

Query: 338 FSES 341
           + ++
Sbjct: 350 WFKT 353



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 39/311 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQ 181
           EVV++  G  H+  +T +G++Y  G N +GQLG        +P   P ++  L       
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLG---HDLDTLPNKRPQRLTSLENYIITC 93

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S+A+T  G+V SWG+   G+LGH  E+          + TPR+IK +    V 
Sbjct: 94  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENG--------RQPTPRMIKAIGAKHVV 145

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGG 297
             A+G  H   +  NG +Y +G  +  ++ +         P+LI  L   P +  + CGG
Sbjct: 146 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAF-IACGG 204

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            H+  ++  G ++ WG N  G LG+  ++    P +++   S          +  +SCG 
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRS--------LGVRYISCGD 256

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
             +  ++ EG + T G     GTF        GQLGHG+  + I P  V      K  Q+
Sbjct: 257 DFSVFLTNEGGVFTCG----AGTF--------GQLGHGSCSNEIVPRKVFELMGSKITQI 304

Query: 417 SCGFNHTGALL 427
           +CG  HT A +
Sbjct: 305 ACGRRHTLAFV 315



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 35/282 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG  ++G+LGLG    + + +P K++        +   G   ++ +T  GK+ + G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH         L +     P+ +  LE   +   + G  HS  +   G+V+ +G
Sbjct: 63  NDHGQLGHD--------LDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114

Query: 264 DRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
             AV + L  +  + R+P+  +I  +   +  ++  G YH   LT+ GELY WGSN  G 
Sbjct: 115 SNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQ 173

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSH 377
           LGIG+     + E+V  P   + +  +    I  ++CG  H+ A+S+ G I  WG     
Sbjct: 174 LGIGT-----TSEKVPMP---TLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWG----K 221

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            TF        GQLG  +     +PT +    ++    +SCG
Sbjct: 222 NTF--------GQLGLNDLNSRCYPTQLRTLRSLGVRYISCG 255


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 180/371 (48%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +     +P +I  L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL  
Sbjct: 64  GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + + +  ++CG  HT A   S G I  +G G            + GQLG G
Sbjct: 289 ------LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P+ V
Sbjct: 331 HTCNVKCPSPV 341



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 160/339 (47%), Gaps = 40/339 (11%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQ GI  NI   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P ++  L+G      A G   S+A++  G++ SWGAG  G+LG   
Sbjct: 65  QLGHDCEGSK----PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
           SP  V+   S+         +V +SCG +HTA +++ G + T+G G            S 
Sbjct: 232 SPCHVKLLRSQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SC 271

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GQLGH +  D ++P  V      +  Q++CG +HT A +
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 123/285 (43%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     ++P P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P  I  L G  +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHDCEGS-----------KPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+       +D I   +  V+ G  H+ A+S  G +  WG         
Sbjct: 173 KECPSQASPQRVKS------LDGI--PLAQVAAGGAHSFALSLSGAVFGWG--------- 215

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               +S GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 216 ---KNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 167/347 (48%), Gaps = 33/347 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVV----CSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG G  G+LGLG  E    PV       A    ++  +ACG  HTL L + G V + G N
Sbjct: 5   WGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASCGDN 64

Query: 99  DFGQLGISENIGY---SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
             GQLG     G    S  P  I  L+ ++VV +S G  HS A+   G +Y WG  + GQ
Sbjct: 65  SRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQ 124

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G+   ++  IP  +  LS     Q A G + S+A+T  G++ SWG    G+LG G++
Sbjct: 125 LGTGELGDRL--IPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKD 182

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            S        S+ +P+ +  L+G+ +   AAG  HS  +  +G VY +G     ++   +
Sbjct: 183 IS--------SQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQ 234

Query: 275 GNHAR---RPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                   +P  I+ L   +   V CG  HT VLT  G +YT+G +  G LG  S     
Sbjct: 235 AKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSS--- 291

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEGKILTWGWG 374
           SP+     F    V+ I   + L++CG  HT     + G++L++G G
Sbjct: 292 SPK-----FGPQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRG 333



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 141/314 (44%), Gaps = 36/314 (11%)

Query: 92  VYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           +Y  G    GQLG+ +  G S      P   +   + VV ++ G  H+  +  DG +   
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 148 GKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           G NS GQLG  L     K    P  ++ L        + G E S+AV   G+V SWGAG 
Sbjct: 62  GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGT 121

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G+    LG         P+ I  L   KV   A G  HS  +  +GR++ +G  
Sbjct: 122 FGQLGTGE----LG-----DRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQN 172

Query: 266 AVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
              ++ L ++ +    P  +S L   P ++ V  GG H+  L+  G +Y WG N    LG
Sbjct: 173 IHGQLGLGKDISSQASPQQVSALDGIPLAQ-VAAGGAHSFALSLSGVVYGWGRNNAHQLG 231

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
           +         E++  P+S + +  +   +  VSCG +HTA +++         GS  TF 
Sbjct: 232 LSQAK---PKEQIFKPYSIAALRSL--DVAFVSCGAEHTAVLTQ--------NGSVYTFG 278

Query: 382 EDGHSSGGQLGHGN 395
           +D   S GQLG  +
Sbjct: 279 DD---SAGQLGRNS 289



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  + S+  P   SA +   L  +A GGAH+  L+ +G VY  G N+  
Sbjct: 169 WGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAH 228

Query: 102 QLGISENIGYS--LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+S+        +P  I+ L+  +V  +S G  H++ +T +G +Y +G +S GQLG  
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRN 288

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             ++     P KVE + G  +  A   +   V ++  G++LS+G G   R
Sbjct: 289 SSSSPKFG-PQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRGPLQR 337



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 126/291 (43%), Gaps = 28/291 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTK--VECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           LY WG+ S GQLGLGK      P+P +      +       A G   ++ +   G V S 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G    G+LG    S      +    Y P LI+ LE  KV   + G  HS  +   GRVY 
Sbjct: 62  GDNSRGQLGRRLPSG-----QEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYS 116

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +G     ++   E      P  I+ L   +  +V CG  H+  LT+ G +++WG N +G 
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQ 176

Query: 320 LGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
           LG+G  I    SP++V      S +D I   +  V+ G  H+ A+S   ++ +GWG    
Sbjct: 177 LGLGKDISSQASPQQV------SALDGI--PLAQVAAGGAHSFALSLSGVV-YGWG---- 223

Query: 379 TFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 428
               + H  G  L      + I  P  +    ++    VSCG  HT  L +
Sbjct: 224 --RNNAHQLG--LSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ 270


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 142/303 (46%), Gaps = 16/303 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  DYG+LG     +R  PV     E H++  +ACG  HTL   E G V+A G N  GQ
Sbjct: 58  FGLNDYGQLGHCRSRTRAEPV--DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQ 115

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG++        P  +  L  K+VVQI+ G  HS A+T  GE+Y WG NS+GQLGLG   
Sbjct: 116 LGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSG 175

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  V+ L GI     + G + S AVT  G V  WG    G+LG G         
Sbjct: 176 TPETK-PCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGD-------- 226

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T    P  +K L   +V     G  H+A +  +G V+ FG     ++      +   P
Sbjct: 227 -TTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLP 285

Query: 282 SLISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + +L      ++ CG  HT     S G +Y +G   +G LG  S   ++SP+ V GP+
Sbjct: 286 RKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGPW 345

Query: 339 SES 341
             S
Sbjct: 346 ETS 348



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 162/333 (48%), Gaps = 37/333 (11%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
           CG  HT+ + + G +++ GLND+GQLG   +   + EP  + GL+   + Q++ G  H+ 
Sbjct: 41  CGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRA-EP--VDGLEAHNITQVACGAQHTL 97

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           A    GE++ WG NSNGQLGL  + + ++P P  V+ L+     Q A G   S+A+T  G
Sbjct: 98  AQNEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTNVG 156

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           ++  WG+   G+LG G           T E  P L+K L+G+ +   + G   S  +  +
Sbjct: 157 EIYCWGSNSHGQLGLGSS--------GTPETKPCLVKLLQGIPISHISCGADFSFAVTPS 208

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
           G VY +G  +  ++   +     +P+ +  L +     + CG  HT  LT  G ++T+G+
Sbjct: 209 GAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGA 268

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWG 372
              G LG  +      P +V        ++ + T++  + CG  HT A   S+G+I  +G
Sbjct: 269 GMYGQLGHCTSANEMLPRKV--------LELMGTTVTQICCGRCHTLAFVPSKGRIYAFG 320

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            GGS            GQLG  +  +   P +V
Sbjct: 321 LGGS------------GQLGTKSTANVNSPQLV 341



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 139/312 (44%), Gaps = 38/312 (12%)

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           L  ++VQ+  G +H+  +  DG+L+ +G N  GQLG  +   +  P    V+ L      
Sbjct: 32  LVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----VDGLEAHNIT 87

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q A G + ++A    G+V +WG+  +G+LG   E S++         TP+++K L   +V
Sbjct: 88  QVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMP--------TPKMVKSLATKQV 139

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
              A G  HS  +   G +Y +G  +  ++ L   G    +P L+  L   P S  + CG
Sbjct: 140 VQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPIS-HISCG 198

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              +  +T  G +Y WG N  G LG+G       P +++    +         +  + CG
Sbjct: 199 ADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQ--------RVTYIRCG 250

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             HTAA++ +G + T+G G              GQLGH    + + P  V         Q
Sbjct: 251 MDHTAALTRDGGVFTFGAGMY------------GQLGHCTSANEMLPRKVLELMGTTVTQ 298

Query: 416 VSCGFNHTGALL 427
           + CG  HT A +
Sbjct: 299 ICCGRCHTLAFV 310



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 46/293 (15%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG+  +G+LGLG    ++I  P            Q   G   ++ V   GK+ S+G 
Sbjct: 1   MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGL 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH          RS +   P  +  LE   +   A G  H+   +E G V+ +G
Sbjct: 61  NDYGQLGH---------CRSRTRAEP--VDGLEAHNITQVACGAQHTLAQNEWGEVFAWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L  E +    P ++  L   +  ++ CG  H+  LT+ GE+Y WGSN +G L
Sbjct: 110 SNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQL 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVL-------VSCGWKHTAAISEGKILTWGW 373
           G+GS              S +P  + C   +L       +SCG   + A++    + +GW
Sbjct: 170 GLGS--------------SGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAV-YGW 214

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     G +S GQLG G+  D   PT +      +   + CG +HT AL
Sbjct: 215 ----------GKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAAL 257


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 19/287 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +        S+ +   +  LA       HTL +TE+G V++ G  D+
Sbjct: 1856 GEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDY 1915

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+Q+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 1916 GKLGHG-NSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGT 1974

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
               K   +PT+V  L        A G   ++ V+  G  V ++G G  G+LG G      
Sbjct: 1975 TTNK--KVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGN----- 2027

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                +  ++ P  IK L+G  +K  A G   S  + + G+V+ +G   +       G   
Sbjct: 2028 ----TVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSN 2083

Query: 279  RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             +P  ++ L   + E+VVCG  HT VLTS G+++ WGSN  G LG+G
Sbjct: 2084 CQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLG 2130



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 15/248 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  L+CG  H+  +T  G ++  G  D+G+
Sbjct: 1910 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
            LG+       + P R+  L+  ++  ++ G +H+  ++ DG  ++ +G    G+LG G  
Sbjct: 1970 LGLGTTTNKKV-PTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNT 2028

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              K   +PTK++ L G   K+ A G + SVA++  GKV +W   G  RL  GQ  +    
Sbjct: 2029 VGK--HLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTW---GQERL-IGQPDT---- 2078

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR 279
             R  S   P+ +  L G  ++    G  H+  +  +G V+ +G  +  ++ L    +  R
Sbjct: 2079 -RGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVR 2137

Query: 280  RPSLISKL 287
             P L+  L
Sbjct: 2138 EPQLVPCL 2145



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 133/296 (44%), Gaps = 45/296 (15%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            E ++WG   NGQ+  G + A V   P +V   S   ++Q   G   +  V   G VL+ G
Sbjct: 1802 EAFLWGSGRNGQMCEGGRGAFV---PVRVPSFS--CSQQIVCGQNCTFVVQNNGTVLACG 1856

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G  GRLG G  S  L  L + S     ++ +L      + + G  H+  + E+G V+ +
Sbjct: 1857 EGSYGRLGQGN-SDDLHSLTAISSIQGFVVTQL---ATSVGSDG--HTLAVTESGEVFSW 1910

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
            GD    K+     +  RRP  I  L   EEV+   CG  H+ V+T+ G+L+T+G+ + G 
Sbjct: 1911 GDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
            LG+G+      P RV    S          I  V+CG  HT  +S      W +G   G 
Sbjct: 1970 LGLGTTTNKKVPTRVVALESH--------QIGYVACGLNHTLCVSADGTNVWAFGD--GD 2019

Query: 380  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ------VSCGFNHTGALLEY 429
            F        G+LG GN V    PT       +KALQ      V+CG   + AL +Y
Sbjct: 2020 F--------GKLGQGNTVGKHLPT------KIKALQGHVIKKVACGTQFSVALSKY 2061


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 181/394 (45%), Gaps = 41/394 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P +       S+ +LACGGAH + LT  G V + G  + GQ
Sbjct: 23  WGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQ 82

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +  SL P  ++ L    +  +S G+ HS  ++ +G ++  G  S GQLG G  A
Sbjct: 83  LGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHA 142

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +   P+  KV C      +Q A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 143 SHCSPV--KVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S   P+++   EGV++   AA   HSA +  +G VY +G        F+    AR P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRG------FKGFEDARVP 247

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSE 340
             ++      +V  G  H   ++  GE+   G N  G L     D+ + SP +      E
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLS----DLQNISPAKHLPHLRE 303

Query: 341 SPVDQIC----TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
             ++++     T I  ++ G +H+  ++E G+I TWGWG              GQLG G+
Sbjct: 304 VNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWG------------EHGQLGLGD 351

Query: 396 DVDYIHPTIVNFGENVK---ALQVSCGFNHTGAL 426
             D I P  V+ G ++    ++ V CG   T A+
Sbjct: 352 TRDRISPVTVSLGYDLNEAASVIVFCGSGFTFAV 385



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 73/174 (41%), Gaps = 41/174 (23%)

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           I  D    ++L Q       PSL S       + CGG H   LTS G++ +WG   +G L
Sbjct: 35  ILQDEHFPQLLHQ-------PSLSSI----SSLACGGAHVIALTSAGKVLSWGRGNSGQL 83

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSCGWKHTAAISE-GKILTWGWG 374
           G G +             S S   +  TS     I  VS GW H+  +S+ G + T G G
Sbjct: 84  GHGLV------------VSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDG 131

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                       S GQLGHG+   +  P  V+   +    QV+CG  H+  LL+
Sbjct: 132 ------------SFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLK 173



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 59/228 (25%)

Query: 197 KVLSWGAGGSGRLG-------------HGQESSIL------------------------- 218
           +V SWGAG  G+LG             H    S +                         
Sbjct: 19  RVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRG 78

Query: 219 -------GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                  G + S S Y P+ +  L+G  +   +AG+ HS  + +NG V+  GD +  ++ 
Sbjct: 79  NSGQLGHGLVVSNSLY-PKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQL- 136

Query: 272 FQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              G+HA    P  +S     + E+V CG  H+ VL  G ++Y +GS + G LG+ +  V
Sbjct: 137 -GHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRV 195

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
               + V  P   S  + +   I  ++    H+AA+S +G + TWG G
Sbjct: 196 ----KSVNVPKVVSGFEGV--EIAGIAANGDHSAAVSVDGHVYTWGRG 237


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 178/371 (47%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG    G+ G+G+        P  C      S+K +ACGG H +FL E G VY  GLN  
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E  G   +P +I  L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL  
Sbjct: 64  GQLG-HEREGN--QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMT 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               V  +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 121 TEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ ++ LEG+ +   AAG  HS  +  +G V+ +G     ++   +     
Sbjct: 177 -----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  +++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + + +  ++CG +HT A   S G I  +G G              GQLG G
Sbjct: 289 ------LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR------------GQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P+ V
Sbjct: 331 HTCNVKCPSPV 341



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 42/312 (13%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           + V +++ G  H   +  DGE+Y  G N+ GQLG  ++  +    P ++  L+       
Sbjct: 34  RSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ----PEQIGALADQHIIHV 89

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKV 240
           A G   S+A++  G++ SWGAG  G+LG          L +T +    PRLI++L    +
Sbjct: 90  ACGESHSLALSDQGQLFSWGAGSDGQLG----------LMTTEDSVAVPRLIQKLNQQTI 139

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCG 296
              + G  H   +  +G+ + +G  +  ++     F      +R   +  +P ++ V  G
Sbjct: 140 LQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-VAAG 198

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G H+  L+  G ++ WG N  G LG+       SP  V+   ++         +V +SCG
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--------VVYISCG 250

Query: 357 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
            +HTA +++ G + T+G G            S GQLGH +  D ++P  V      +  Q
Sbjct: 251 EEHTAVLTKSGGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 416 VSCGFNHTGALL 427
           ++CG  HT A +
Sbjct: 299 IACGRQHTLAFV 310



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 121/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+G     ++  P     +S    K+ A G +  V +   G+V + G    
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQTSPQRVRS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 166/352 (47%), Gaps = 21/352 (5%)

Query: 19  KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
           +LG+    C  + S     +   +WG GD GRLG+ +  ++++P V    ++  ++  + 
Sbjct: 85  RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           GG H + LTE G VY  G   FG LG        L  L     K  +V +S G  H++A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAV 202

Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           T  GELY WG++   G+LG G         +  PTKV+ L          GF  ++A+T 
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGF-FTMALTK 261

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ SWG   +  LGHG  +         + + P+++  LE V +   A G  H+A + 
Sbjct: 262 SGQLWSWGGNANHELGHGTRA---------NNWKPKVVAALEDVTLVQVACGGFHAAALT 312

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTW 312
           ++G+V  +G     ++      + + P+++  +       + CG   T  +T  G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372

Query: 313 GSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G N +  LGI G  D    P  VQ  F ++  ++    ++ VSCG  H   I
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQ--FPQALHEKTPVEVLGVSCGANHGVCI 422



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 183/412 (44%), Gaps = 65/412 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
           WG G +G++G GS ++   PV+ S  +  +   +A                  CG  H++
Sbjct: 40  WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
              E   V+  G  D G+LGI        +P  ++   K V   S G  H+ A+T  G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
           Y WG  + G LG G    +++P       L G +  +    + G   + AVT  G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHTAAVTESGELYTW 211

Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           G   G GRLGHG        +   +   P  ++ L+ V + +   G   +  + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALD-VPIALVYCGGFFTMALTKSGQLW 266

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +G  A  ++      +  +P +++ L      +V CGG+H   LT  G++ TWG   NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSH 377
            LG G+++    P  V     E+  D+ CT I   +CG   TAAI+E G + TWG    +
Sbjct: 327 QLGHGTLENGKEPAIV-----EAMADKTCTYI---ACGPAWTAAITENGDLYTWGKNRDY 378

Query: 378 GTFSEDGHSSGGQLG-HGNDVDYIHPTIVNFGE------NVKALQVSCGFNH 422
                       QLG  G   + + P +V F +       V+ L VSCG NH
Sbjct: 379 ------------QLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANH 418



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 150/317 (47%), Gaps = 54/317 (17%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
           SS    + E++ WG+ ++GQ+G G +  + +P+     K+   +G+   Q  +  +    
Sbjct: 28  SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87

Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +V VT G           V  WG G  GRLG   E          ++Y P +   ++  +
Sbjct: 88  NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVV-- 294
           V++A+AG LH+  + E G VY +G  A   +    G+ +    L+ +L   P+ + +V  
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GHGSYERELLPRLLEGPWKDRIVHV 192

Query: 295 -CGGYHTCVLTSGGELYTWGSNE-NGCLGIGSIDVLHSPERVQGPFSE-SPVDQICTSIV 351
             GG HT  +T  GELYTWG +E  G LG G+ D++      +G  S  + V  +   I 
Sbjct: 193 SAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMD-----EGALSRPTKVQALDVPIA 247

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           LV CG   T A+++   L W WGG+          +  +LGHG   +   P +V   E+V
Sbjct: 248 LVYCGGFFTMALTKSGQL-WSWGGN----------ANHELGHGTRANNWKPKVVAALEDV 296

Query: 412 KALQVSCGFNHTGALLE 428
             +QV+CG  H  AL +
Sbjct: 297 TLVQVACGGFHAAALTQ 313


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 153/311 (49%), Gaps = 40/311 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VV+++ G  HS+ +T  G LY++G N  GQLGLG    K +  P+ V+ L     ++ A 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLG--HTKSLNKPSFVKPLKPEKVRKVAC 97

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++  +  GK+ S+G    G+LGH         +   +E  P+ I+ +  +++K  A
Sbjct: 98  GRNHTIVYSESGKLFSFGCNEDGQLGH---------VDKENELLPKEIESIPQMEIKQIA 148

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTC 301
            G  HS  + E+G VY++G+    ++   E       SL  KL + +EVV   CG YHT 
Sbjct: 149 CGTYHSIILSEDGDVYVWGNNNEGQLGLGE---EVENSLPKKLKFKKEVVSVSCGYYHTA 205

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKH 359
           ++T  G LYT+G NE G LG+ S  + ++  P+ V  P             + VSCG +H
Sbjct: 206 LVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADND-------EYISVSCGARH 258

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVS 417
           T AI+ +G    WG G            S GQLGHG   ++   P  +      K + VS
Sbjct: 259 TVAITKQGHCYAWGDG------------SQGQLGHGTKLLEVNEPKQIKKLSGQKCISVS 306

Query: 418 CGFNHTGALLE 428
           CG +HT  + E
Sbjct: 307 CGESHTAVVTE 317



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 176/360 (48%), Gaps = 42/360 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHH 134
           +ACG  H+  +TE+G +Y  G ND+GQLG+      + +P  +  LK E V +++ G +H
Sbjct: 43  MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLN-KPSFVKPLKPEKVRKVACGRNH 101

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   +  G+L+ +G N +GQLG   K  ++  +P ++E +  +  KQ A G   S+ ++ 
Sbjct: 102 TIVYSESGKLFSFGCNEDGQLGHVDKENEL--LPKEIESIPQMEIKQIACGTYHSIILSE 159

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACI 253
            G V  WG    G+LG G+E              P+ +K + E V V   + G+ H+A +
Sbjct: 160 DGDVYVWGNNNEGQLGLGEE---------VENSLPKKLKFKKEVVSV---SCGYYHTALV 207

Query: 254 DENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
             +G +Y FG+  + K+       ++   P  ++    ++E   V CG  HT  +T  G 
Sbjct: 208 TRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGH 267

Query: 309 LYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-G 366
            Y WG    G LG G+ +  ++ P++++         Q C S   VSCG  HTA ++E G
Sbjct: 268 CYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSG-----QKCIS---VSCGESHTAVVTESG 319

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           K+ T+G  G HG   +      G+    N  D ++ +  N+      + VSCG  HT  L
Sbjct: 320 KVFTFG-DGRHGKLGQ------GEDSFSNSFDPVYLSRFNY---FNVVYVSCGGCHTLVL 369



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 148/320 (46%), Gaps = 69/320 (21%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLG  +S  +P      +   ++ +ACG  HT+  +E+G +++ G N+ G
Sbjct: 61  VFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDG 120

Query: 102 QLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG    EN    L P  I  + + E+ QI+ G +HS  ++ DG++Y+WG N+ GQLGLG
Sbjct: 121 QLGHVDKEN---ELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLG 177

Query: 159 KKAAKVIPIPTK-------VEC-------------------------------LSGIFTK 180
           ++    +P   K       V C                               LS     
Sbjct: 178 EEVENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVP 237

Query: 181 QA-------------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           Q+             + G   +VA+T  G   +WG G  G+LGHG +      L   +E 
Sbjct: 238 QSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTK------LLEVNE- 290

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLIS 285
            P+ IK+L G K    + G  H+A + E+G+V+ FGD    K+   E + +    P  +S
Sbjct: 291 -PKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLS 349

Query: 286 KLPYSE--EVVCGGYHTCVL 303
           +  Y     V CGG HT VL
Sbjct: 350 RFNYFNVVYVSCGGCHTLVL 369


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 166/359 (46%), Gaps = 37/359 (10%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
           ++ACG  H++F+T +G  ++ G ND+GQLG        + P  +  LK K  + ++ G  
Sbjct: 46  SVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKAL-VNPRCVKALKDKRAILVACGRS 104

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H+   T D ++Y +G NS  QLG+ K +A     P  V  L+G+  K    G + S+A++
Sbjct: 105 HTLVATDDKKVYAFGINSEHQLGV-KSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G V  WG+   G+LG G         R      P  +K  EG  + I+A  + HSA +
Sbjct: 164 AKGIVYLWGSSEHGQLGLG---------RKKQRKLPVQLK-TEGKAIAISAGAY-HSAYV 212

Query: 254 DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
           + +G +Y FG+    K+         R+PS +  +      V CGG HT  LT  G  Y+
Sbjct: 213 NTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYS 272

Query: 312 WGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
           +G    G LG+G   V H+  P  +Q P            +  VS G  HTA +SEG+ +
Sbjct: 273 FGDGSQGQLGLGQ-RVTHAGRPHLIQMPTG--------VKMARVSAGQSHTAFLSEGRQM 323

Query: 370 TWGWGGSHGTFS-EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                G HG  + EDG     +           P +V+     +  QVSCG  HT  L+
Sbjct: 324 YTCGEGRHGKLALEDGEMGSNKFS---------PMLVDILSLFQVQQVSCGGCHTLVLV 373



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 152/324 (46%), Gaps = 26/324 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+ DYG+LG G  ++   P    A +      +ACG +HTL  T+   VYA G+N   Q
Sbjct: 66  FGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQ 125

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  +  Y  +P  ++ L   +V  ++ G  HS A++  G +Y+WG + +GQLGLG+K 
Sbjct: 126 LGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKK 185

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  K E  +   +     G   S  V   G + ++G    G+LG          L
Sbjct: 186 QRKLPVQLKTEGKAIAISA----GAYHSAYVNTDGVLYTFGETEHGKLGTN--------L 233

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
                  P  + +++G+   +A  G  H+  +  +GR Y FGD +  ++ L Q   HA R
Sbjct: 234 APKKCRKPSKVPDIQGLVTSVACGGS-HTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGR 292

Query: 281 PSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P LI ++P       V  G  HT  L+ G ++YT G   +G L       L   E     
Sbjct: 293 PHLI-QMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL------ALEDGEMGSNK 345

Query: 338 FSESPVDQICT-SIVLVSCGWKHT 360
           FS   VD +    +  VSCG  HT
Sbjct: 346 FSPMLVDILSLFQVQQVSCGGCHT 369



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 153/350 (43%), Gaps = 52/350 (14%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + E G V+      FG+   S+N+     P         V+ ++ G  HS  IT  G  +
Sbjct: 15  IPELGAVFT-----FGKSKFSDNL-----PGTFWVKNDAVISVACGDQHSVFITASGRTF 64

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWG 202
            +G N  GQLG G   A V P      C+  +  K+A L   G   ++  T   KV ++G
Sbjct: 65  SFGSNDYGQLGHGHTKALVNP-----RCVKALKDKRAILVACGRSHTLVATDDKKVYAFG 119

Query: 203 AGGSGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
                +LG          ++S++ Y   P+L+  L GV+VK   AG  HS  +   G VY
Sbjct: 120 INSEHQLG----------VKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVY 169

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           ++G     ++        + P  +     +  +  G YH+  + + G LYT+G  E+G L
Sbjct: 170 LWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKL 229

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGT 379
           G        +P++ + P   S V  I   +  V+CG  HT A++ +G+  ++G G     
Sbjct: 230 GTNL-----APKKCRKP---SKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDG----- 276

Query: 380 FSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 428
                  S GQLG G  V +   P ++     VK  +VS G +HT  L E
Sbjct: 277 -------SQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSE 319



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 9/227 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG+ ++G+LGLG  + R  PV      K    A++ G  H+ ++   G +Y  G  + G
Sbjct: 170 LWGSSEHGQLGLGRKKQRKLPVQLKTEGK--AIAISAGAYHSAYVNTDGVLYTFGETEHG 227

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG +       +P ++  ++  V  ++ G  H+ A+T DG  Y +G  S GQLGLG++ 
Sbjct: 228 KLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRV 287

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  ++  +G+   + + G   +  ++ G ++ + G G  G+L    E   +G  
Sbjct: 288 THA-GRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL--ALEDGEMG-- 342

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
             +++++P L+  L   +V+  + G  H+  +   G     G+R  D
Sbjct: 343 --SNKFSPMLVDILSLFQVQQVSCGGCHTLVLVVPGLTDPQGNRMGD 387


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 176/390 (45%), Gaps = 43/390 (11%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           + WGN + G+LG G    R  PV  +      + A+A G  HT  LT  G V   G N +
Sbjct: 129 SCWGNNESGQLGNGITIQRRTPVQVAGLSS-GVAAIAAGEYHTCALTTDGAVTCWGSNGY 187

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG       S  P++++GL   V  I+ G  H+ A+T  G +  WG+N NGQLG G  
Sbjct: 188 GQLGDGTTTQRS-TPVQVAGLSSGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTT 246

Query: 161 AAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +  P+      + G+ ++ AA+  G   + A+T GG V  WGA  SG+LG G      
Sbjct: 247 TQRSTPVN-----VLGLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDG------ 295

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               +    TP  +  L    V   AAG  H+  I   G V  +G     ++        
Sbjct: 296 ---TTDERSTPVDVVGLSS-GVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQ 351

Query: 279 RRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             P +++ L   +  +  G  HTC +T+GG +  WG N +G LG G+     +P +V+G 
Sbjct: 352 STPVVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEG- 410

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                   + + +  ++ G  HT A+S EG +  W            G++  GQLG G  
Sbjct: 411 --------LSSGVADITAGDSHTCALSTEGGVTCW------------GNNESGQLGDGTT 450

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +    P  V  G +   + ++ G +HT AL
Sbjct: 451 IQRSTPVQVE-GLSSGVVAITAGDSHTCAL 479



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 178/391 (45%), Gaps = 45/391 (11%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           + WG   Y +LG G+   +  PVV +     +  A+A G  HT  +T  G V   G N  
Sbjct: 333 SCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRA-AAIAAGDGHTCAMTTGGGVSCWGRNWS 391

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG          P+++ GL   V  I+ G  H+ A++ +G +  WG N +GQLG G  
Sbjct: 392 GQLGDGTTT-QRRTPMQVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTT 450

Query: 161 AAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +  P+  +VE LS G+    A  G   + A++  G V  WG  GSG+LG+G       
Sbjct: 451 IQRSTPV--QVEGLSSGVVAITA--GDSHTCALSTEGGVTCWGGNGSGQLGNG------- 499

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T   TP  ++ L    + I A G  H+  +   G V  +G     ++   +G   +
Sbjct: 500 --TTTQRSTPVQVEGLSSGVMAITA-GDSHTCALTTGGGVTCWGGNWYGQL--GDGTTTQ 554

Query: 280 RPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           R   ++ +  S     +  GG HTC L++ G +  WG N    LG G+    ++P +V+G
Sbjct: 555 RNMPVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEG 614

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                    + + +  ++ G+ HT A I+ G++  WGW            +  GQLG G 
Sbjct: 615 ---------LSSGVAAIAAGYAHTCALITSGEVTCWGW------------NWYGQLGDGT 653

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               + P +VN G + +   +  G+ HT AL
Sbjct: 654 TTQRMTPVVVN-GLSSEVAAIVAGYAHTCAL 683



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 161/354 (45%), Gaps = 40/354 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G A+T  LT    V   G N+FGQLG    I  +  P+ ++GL   VV I+ GY H+
Sbjct: 61  IAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRN-TPVAVNGLSSGVVAIAAGYAHT 119

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+T  G +  WG N +GQLG G    +  P+  +V  LS      AA G   + A+T  
Sbjct: 120 CALTTSGGVSCWGNNESGQLGNGITIQRRTPV--QVAGLSSGVAAIAA-GEYHTCALTTD 176

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V  WG+ G G+LG G          +T   TP  +  L      I A G  H+  +  
Sbjct: 177 GAVTCWGSNGYGQLGDG---------TTTQRSTPVQVAGLSSGVTAITAGGS-HTCALTT 226

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTW 312
            G V  +G     ++   +G   +R + ++ L  S EV     G  +TC LT+GG +  W
Sbjct: 227 GGAVTCWGRNGNGQL--GDGTTTQRSTPVNVLGLSSEVAAITAGDVYTCALTTGGGVTCW 284

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G+N +G LG G+ D   +P  V G         + + +  ++ G  HT AI+ G      
Sbjct: 285 GANWSGQLGDGTTDERSTPVDVVG---------LSSGVTAIAAGNDHTCAITTG------ 329

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                G  S  G +   QLG G       P +VN G + +A  ++ G  HT A+
Sbjct: 330 -----GGVSCWGVNQYSQLGDGTTTQQSTPVVVN-GLSSRAAAIAAGDGHTCAM 377



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 148/336 (44%), Gaps = 28/336 (8%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           + WG    G+LG G+   R  P+         +  +  G +HT  L+  G V   G N+ 
Sbjct: 384 SCWGRNWSGQLGDGTTTQRRTPMQVEGLSS-GVADITAGDSHTCALSTEGGVTCWGNNES 442

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG    I  S  P+++ GL   VV I+ G  H+ A++ +G +  WG N +GQLG G  
Sbjct: 443 GQLGDGTTIQRS-TPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTT 501

Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +  P+  +VE L SG+    A  G   + A+T GG V  WG    G+LG G       
Sbjct: 502 TQRSTPV--QVEGLSSGVMAITA--GDSHTCALTTGGGVTCWGGNWYGQLGDG------- 550

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T    P  +  L      IAA G  H+  +   G V  +G    D++      +  
Sbjct: 551 --TTTQRNMPVNVVGLSSGVAAIAAGGS-HTCALSTEGGVTCWGWNTYDQLGDGTRTNHN 607

Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P  +  L      +  GY HTC L + GE+  WG N  G LG G+     +P  V G  
Sbjct: 608 TPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLS 667

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILT-WGW 373
           SE         +  +  G+ HT A+S G  +T WGW
Sbjct: 668 SE---------VAAIVAGYAHTCALSTGGGVTCWGW 694



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 134/306 (43%), Gaps = 24/306 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV         + A+  G +HT  LT  G V   G N +GQ
Sbjct: 488 WGGNGSGQLGNGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQ 546

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+ + GL   V  I+ G  H+ A++ +G +  WG N+  QLG G +  
Sbjct: 547 LGDGTTTQRNM-PVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTN 605

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +VE LS      AA G+  + A+   G+V  WG    G+LG G          
Sbjct: 606 HNTPV--QVEGLSSGVAAIAA-GYAHTCALITSGEVTCWGWNWYGQLGDG---------T 653

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN----HA 278
           +T   TP ++  L   +V    AG+ H+  +   G V  +G        +Q GN      
Sbjct: 654 TTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTCWGW----NKYYQLGNGTISQR 708

Query: 279 RRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             P  +  L      +  G  HTC L++GG +  WG +  G LG+G+I    +P  V   
Sbjct: 709 SIPMDVDGLSSGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTVL 768

Query: 338 FSESPV 343
           F   PV
Sbjct: 769 FVYLPV 774



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 23/144 (15%)

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
           I+   +   +  G  +TC LT+   +  WG+NE G LG G+    ++P  V G       
Sbjct: 52  IASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVAVNG------- 104

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             + + +V ++ G+ HT A+ + G +  W            G++  GQLG+G  +    P
Sbjct: 105 --LSSGVVAIAAGYAHTCALTTSGGVSCW------------GNNESGQLGNGITIQRRTP 150

Query: 403 TIVNFGENVKALQVSCGFNHTGAL 426
             V  G +     ++ G  HT AL
Sbjct: 151 VQV-AGLSSGVAAIAAGEYHTCAL 173


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 181/371 (48%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E+ G   +P  I  L  + +V ++ G  HS A++  G+++ WG  S+GQLGL  
Sbjct: 64  GQLG-HESEGS--KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV-- 288

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + + +  ++CG  HT A   S G I  +G G            + GQLG G
Sbjct: 289 ------LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTG 330

Query: 395 NDVDYIHPTIV 405
           +  +   P+ V
Sbjct: 331 HTCNVKCPSPV 341



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 134/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P +  A     +  +ACG +H++ L++ G V++ G    GQLG++        P  I  
Sbjct: 74  KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++QIS G  H  A+  DG+ + WG+NS GQLGLGK+       P +V+ L GI  
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS-PQRVKSLDGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   SG+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRESPCHVKLLRSQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           +HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 HHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 40/339 (11%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQ GI  N+   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P  +  L+G      A G   SVA++  G+V SWGAG  G+LG   
Sbjct: 65  QLGHESEGSK----PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
           SP  V+   S+         +V +SCG +HTA +++ G + T+G G            S 
Sbjct: 232 SPCHVKLLRSQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SC 271

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GQLGH +  D ++P  V      +  Q++CG +HT A +
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 124/285 (43%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     +IP P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P LI  L G  +   A G  HS  + + G+V+ +G  +
Sbjct: 64  GQLGHESEGS-----------KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      ++ CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+       +D I   +  V+ G  H+ A+S  G +  WG         
Sbjct: 173 KECPSQASPQRVKS------LDGI--PLAQVAAGGAHSFALSLSGAVFGWG--------- 215

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               +S GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 216 ---KNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 171/351 (48%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-MTIEDSVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +    AG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 42/336 (12%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISPNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
           ++    S +   PRLI++L    +   + G  H   +  +G+ + +G  +  ++     F
Sbjct: 118 LMTIEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEF 175

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 +R   +  +P ++ VV GG H+  L+  G ++ WG N  G LG+       SP 
Sbjct: 176 PSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            V+   ++         +V +SCG +HTA +++ G + T+G G            S GQL
Sbjct: 235 HVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQL 274

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 119/285 (41%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q+         G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVVA-------GGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 149/334 (44%), Gaps = 37/334 (11%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
            G  +YG L LG      +    S F   S++++A G    + L + G V+  GLN  GQ 
Sbjct: 3139 GQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQC 3198

Query: 104  GISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            GI       + P  I   SG+   +V  S G  H  AI+ DG +Y WG N  GQLGLG  
Sbjct: 3199 GIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTT 3258

Query: 161  AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
             +K    P  +E L    F   AA+ +  S  V+  G +L++G   SG+LG  H Q    
Sbjct: 3259 VSKS-HTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQH--- 3314

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    ++TP+L++ L   KV   A G  H+  I ++G VY FG     ++      +
Sbjct: 3315 --------QHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQN 3366

Query: 278  ARRPSLISKLPYSE-----------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             + P L+   P              +V CG YHT  +   G++ TWG N+ G LGIGS +
Sbjct: 3367 TKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKE 3426

Query: 327  VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
                 + V  P +        + +   SCG  HT
Sbjct: 3427 HKSIAQFVPLPLT--------SRVKRASCGCYHT 3452



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 35/339 (10%)

Query: 90  GCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           G +Y+ G N +G+LG+ ++I  + L  + + G    + Q+ +G    + +T DG +   G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGW-DHIRQVVSGNEILAILTSDGVVLTCG 406

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGS 206
            N +GQ G G    +V+ +   ++ L     K   A+ G E  +A+T  G   SWG    
Sbjct: 407 LNKSGQCGHGNFDERVM-LLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH    + L        Y P+LI+ ++  K+K AA  + HSA +  +G +Y FG   
Sbjct: 466 GQLGHENVGTKL--------YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMND 517

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++      H   P L+  L   +   V CG YH  + T  GE++T G N++G LG+G 
Sbjct: 518 CGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGH 577

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
              +  P +V       P + +C     V+CG+ H  AI+    LT+ +          G
Sbjct: 578 NKQVKVPTQVV-----LPNELVC----FVACGYYHATAITSTG-LTYSF----------G 617

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
            +  GQLG G+ +    P  +    N + +  +CG  HT
Sbjct: 618 RNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHT 656



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 172/408 (42%), Gaps = 68/408 (16%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHT----------LFLTETGCV 92
           G   YG LGLG              E+H L ++  CG  H             LT  G V
Sbjct: 354 GQNSYGELGLGD-----------DIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVV 402

Query: 93  YATGLNDFGQLG---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
              GLN  GQ G     E +   L P++ +   + + +  S G  H  AIT  G  Y WG
Sbjct: 403 LTCGLNKSGQCGHGNFDERVML-LRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWG 461

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N  GQLG      K+  +P  +E +     K AA+ +  S  V+  G++ ++G    G+
Sbjct: 462 YNDRGQLGHENVGTKLY-LPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQ 520

Query: 209 LG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           LG  H Q  S           TP+L+K L G  V + + G  H      +G V+  G   
Sbjct: 521 LGLDHTQHQS-----------TPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKND 569

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++        + P+ +  LP      V CG YH   +TS G  Y++G N+ G LGIGS
Sbjct: 570 HGQLGLGHNKQVKVPTQVV-LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGS 628

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 383
              +H    +    S +      T +V  +CG  HT  +S+ G++  +            
Sbjct: 629 --KIHQNIPIALTISSN------TRMVHAACGCYHTLLMSDSGQVFVF------------ 668

Query: 384 GHSSGGQLGHGNDVDYIHPTI--VNFGENV-KALQVSCGFNHTGALLE 428
           G ++ GQLG+  + D + P    V   +N+ + L ++ GF  T  ++E
Sbjct: 669 GRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVE 716



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 133/287 (46%), Gaps = 17/287 (5%)

Query: 49   GRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
            G+ G+G+ + R     P+   +    ++ A + G  H L ++  G VY+ G ND GQLG+
Sbjct: 3196 GQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGL 3255

Query: 106  SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
               +  S  P  I  L+++  +   +  YHHS+ ++ +G+L  +G N +GQLGL     +
Sbjct: 3256 GTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQ 3315

Query: 164  VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFL 221
                P  VE LS     + A G   +VA+   G V S+G    G+LG  H Q + +   +
Sbjct: 3316 --HTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLV 3373

Query: 222  R-STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            +   +  TP L    + V+V     G+ H+  I E G+V  +G     ++      H   
Sbjct: 3374 KIPPAPRTPMLDAVNKAVQV---YCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSI 3430

Query: 281  PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
               +  LP +  V    CG YHT +L   G    +G N  G LG+ S
Sbjct: 3431 AQFV-PLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVAS 3476



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WG  D G+LGLG+  S+     V+ S  EK+ +   A    H+  ++  G +   G+ND 
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304

Query: 101  GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG+ ++  +   P  +  L  + V +++ G +H+ AI  DG++Y +GKN  GQLGL  
Sbjct: 3305 GQLGL-DHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363

Query: 160  KAAKVIPIPTKV------ECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
                 +P+  K+        L  +    Q   G+  +V +   GKV++WG    G+LG G
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423

Query: 213  QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +       +S +++ P  +      +VK A+ G  H+  +  NGR  +FG
Sbjct: 3424 SKEH-----KSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFG 3465



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 18/264 (6%)

Query: 1   MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESR- 59
           ML R + A+  + +K    + +  G C+  I+ T     A  WG  D G+LG  ++ ++ 
Sbjct: 423 MLLRPIQALRSHRVKY---INASNG-CEHLIAIT-DTGLAYSWGYNDRGQLGHENVGTKL 477

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           + P +  + ++  +K+ A    H+  ++ +G +Y  G+ND GQLG+      S   L  +
Sbjct: 478 YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKA 537

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
            L   V  +S G +H    T+ GE++  GKN +GQLGLG    K + +PT+V  L     
Sbjct: 538 LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN--KQVKVPTQV-VLPNELV 594

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
              A G+  + A+T  G   S+G    G+LG G +           +  P  +      +
Sbjct: 595 CFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK---------IHQNIPIALTISSNTR 645

Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
           +  AA G  H+  + ++G+V++FG
Sbjct: 646 MVHAACGCYHTLLMSDSGQVFVFG 669



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 19/186 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            +G  D G+LGL   + +  P +        +  +ACG  HT+ + + G VY+ G N++GQ
Sbjct: 3299 FGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQ 3358

Query: 103  LGISENIGYSLEPL-------RISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            LG+S      +  L       R   L    + VQ+  GY+H+  I   G++  WG+N  G
Sbjct: 3359 LGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYG 3418

Query: 154  QLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
            QLG+G K     A+ +P+P           K+A+ G   ++ +   G+ + +G    G+L
Sbjct: 3419 QLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLVNGRPMVFGRNNKGQL 3472

Query: 210  GHGQES 215
            G    S
Sbjct: 3473 GVASRS 3478



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 143/352 (40%), Gaps = 96/352 (27%)

Query: 92   VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGK 149
            +++ G N++G+L +   N    LE  R S    + +Q I+ G      +  DG ++  G 
Sbjct: 3135 IFSCGQNNYGELCLGHCNPTNKLE--RASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGL 3192

Query: 150  NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
            N +GQ G+G    ++I +P+ +  LSGI     A   G E  +A++  G V SWG    G
Sbjct: 3193 NKSGQCGIGNFDERLI-VPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRG 3251

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            +LG G   S          +TPR+I+ L E   +  AA  +                   
Sbjct: 3252 QLGLGTTVS--------KSHTPRVIESLREKYFITFAAVSY------------------- 3284

Query: 267  VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                                           +H+ V+++ G+L T+G N++G LG+    
Sbjct: 3285 -------------------------------HHSAVVSNNGDLLTFGMNDSGQLGLDHTQ 3313

Query: 327  VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
              H+P+ V+   S+         +  V+CG  HT AI  +G + ++G             
Sbjct: 3314 HQHTPQLVETLSSQK--------VGRVACGLYHTVAIVDDGDVYSFG------------K 3353

Query: 386  SSGGQLGHGNDVDYIHPTIVNFGENV---------KALQVSCGFNHTGALLE 428
            +  GQLG  +  +   P +V               KA+QV CG+ HT  +LE
Sbjct: 3354 NEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILE 3405


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 175/399 (43%), Gaps = 51/399 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG GD GRLG    + R+ P V  +    ++  +ACGG+HT+ L   G V++ G    G
Sbjct: 166 LWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQG 225

Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG   N+     PL I G  ++  VV ++   +HS+ I+ DG LY WGK +   LG   
Sbjct: 226 CLG-HGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPFLGYMD 283

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +      P  V+ L G    Q A G   ++ +   G+V S+G    G LG G + +I  
Sbjct: 284 DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAIT- 342

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P ++  L  V +   + G  HSA IDE+G ++++G  A  ++         
Sbjct: 343 --------KPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQL-----GQGE 387

Query: 280 RPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHS 330
             SL S  P +       E+V CG  HT  +T+ G  Y WG N +   G+ S     L S
Sbjct: 388 PKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSS 447

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  +  P    P          ++CG   T  ++  G++ TWG   S            G
Sbjct: 448 PRGIVLPSGIRPTQ--------INCGANFTVLVTSIGQLFTWGCNMS------------G 487

Query: 390 QLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLG+G     +  P  V      +   V+CG +H G L+
Sbjct: 488 QLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHIGCLV 526



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 148/328 (45%), Gaps = 42/328 (12%)

Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKV 164
           E +   L  +R S + ++ +++  G   +  +  D   +LY+WG    G+LG   K  K 
Sbjct: 125 EAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLG--HKDDKP 182

Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
             +P  VE L G      A G   ++A+   G+V SWGAG  G LGHG        LR  
Sbjct: 183 RFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGN-------LR-- 233

Query: 225 SEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RP 281
             Y+P +I   L  V V   A    HSA I E+G +Y +G +A   + + + +  +  +P
Sbjct: 234 DRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWG-KAGPFLGYMDDSVTKQTKP 292

Query: 282 SLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            L+  L  +   +V CG  HT V+   G +Y++G N+ G LG G    +  P  V     
Sbjct: 293 RLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPN--- 349

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                    SI  VSCG  H+AAI E G +  WGWG              GQLG G    
Sbjct: 350 -------LVSICKVSCGRHHSAAIDEDGVLFMWGWGAR------------GQLGQGEPKS 390

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGAL 426
              PT VN   +     VSCG+ HT A+
Sbjct: 391 LFSPTPVNGFNDQPLEDVSCGYGHTAAI 418


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 170/351 (48%), Gaps = 39/351 (11%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +    AG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT VLT  G ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACG 302

Query: 357 WKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            +HT A   S G I  +G G              GQLG G+  +   P+ V
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 130/280 (46%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WG+NS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q   G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 160/338 (47%), Gaps = 46/338 (13%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISPNLQGVVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ VV GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P  V+   ++         +V +SCG +HTA +++ G + T+G G            S G
Sbjct: 233 PCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SCG 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      V+  P     +S    K+ A G   SV +   G+V + GA   
Sbjct: 4   WGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
                  SP+RV+      P+ Q+         G  H+ A+S  G +  WG         
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVVA-------GGAHSFALSLSGAVFGWGM-------- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 165/350 (47%), Gaps = 51/350 (14%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
           ++KA+A G  HTLFL   G V++ G N  G+LG   + E   Y++ P+ IS   + ++QI
Sbjct: 48  TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  HS A++ DG L+ WG NS+GQL +      +   P +V  L    T Q A G   
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +V++ GGG+V  WG    GR+ H                +P  ++    V +   +AG L
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVELFVSVPIIQISAGNL 206

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGYHTCVLT 304
            +  +  +G ++ +G     ++    GN   R    P  +  +     V CG  H+  LT
Sbjct: 207 FTMALTASGTLFAWGRNEEGQL----GNFTNRDVINPREVPNINSVVVVECGDSHSIALT 262

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             G +++ GS+  G LG G       P R Q        + + + +  ++CG  HT  ++
Sbjct: 263 HEGRVFSCGSDSFGQLGCG------QPSRSQNCM-RGITEMLGSHVTRIACGRCHTIVVA 315

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            GK+ T+G             +S GQLGHGN  + I P +++  ENV ++
Sbjct: 316 NGKMHTFGL------------NSNGQLGHGNTRNQITPRMIDSVENVASV 353



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 51/299 (17%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
           V  +LY++G  S+GQL     +A    +++  P  V        G+  K  A G + ++ 
Sbjct: 2   VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61

Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +   GKV S G+  +G LG G  +E S          YT   +     V++   +AG  H
Sbjct: 62  LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111

Query: 250 SACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           S  + ++GR++ +G  +  ++    +   +  P  +  LP + +V CG  HT  L  GG 
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
           ++ WG   +G        + HSP  V+  F   P+ Q                 IS G +
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVE-LFVSVPIIQ-----------------ISAGNL 206

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 426
            T     S GT    G +  GQLG+  + D I+P  V    N+ + + V CG +H+ AL
Sbjct: 207 FTMALTAS-GTLFAWGRNEEGQLGNFTNRDVINPREV---PNINSVVVVECGDSHSIAL 261



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 18/153 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG  +      P        +S+  + CG +H++ LT  G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277

Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG      S+N    +  +    L   V +I+ G  H + +  +G+++ +G NSNGQLG 
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332

Query: 158 GKKAAKVIP-IPTKVECLSGIFTKQAALGFEQS 189
           G    ++ P +   VE ++ +F      G++QS
Sbjct: 333 GNTRNQITPRMIDSVENVASVFA-----GWDQS 360


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 165/350 (47%), Gaps = 51/350 (14%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
           ++KA+A G  HTLFL   G V++ G N  G+LG   + E   Y++ P+ IS   + ++QI
Sbjct: 48  TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  HS A++ DG L+ WG NS+GQL +      +   P +V  L    T Q A G   
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +V++ GGG+V  WG    GR+ H                +P  ++    V +   +AG L
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVELFVSVPIIQISAGNL 206

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGYHTCVLT 304
            +  +  +G ++ +G     ++    GN   R    P  +  +     V CG  H+  LT
Sbjct: 207 FTMALTASGTLFAWGRNEEGQL----GNFTNRDVINPREVPNINSVVVVECGDSHSIALT 262

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             G +++ GS+  G LG G       P R Q        + + + +  ++CG  HT  ++
Sbjct: 263 HEGRVFSCGSDSFGQLGCG------QPSRSQNCM-RGITEMLGSHVTRIACGRCHTIVVA 315

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            GK+ T+G             +S GQLGHGN  + I P +++  ENV ++
Sbjct: 316 NGKMHTFGL------------NSNGQLGHGNTRNQITPRMIDSVENVASV 353



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 51/299 (17%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
           V  +LY++G  S+GQL     +A    +++  P  V        G+  K  A G + ++ 
Sbjct: 2   VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61

Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +   GKV S G+  +G LG G  +E S          YT   +     V++   +AG  H
Sbjct: 62  LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111

Query: 250 SACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           S  + ++GR++ +G  +  ++    +   +  P  +  LP + +V CG  HT  L  GG 
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
           ++ WG   +G        + HSP  V+  F   P+ Q                 IS G +
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVE-LFVSVPIIQ-----------------ISAGNL 206

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 426
            T     S GT    G +  GQLG+  + D I+P  V    N+ + + V CG +H+ AL
Sbjct: 207 FTMALTAS-GTLFAWGRNEEGQLGNFTNRDVINPREV---PNINSVVVVECGDSHSIAL 261



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 18/153 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG  +      P        +S+  + CG +H++ LT  G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277

Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG      S+N    +  +    L   V +I+ G  H + +  +G+++ +G NSNGQLG 
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332

Query: 158 GKKAAKVIP-IPTKVECLSGIFTKQAALGFEQS 189
           G    ++ P +   VE ++ +F      G++QS
Sbjct: 333 GNTRNQITPRMIDSVENVASVFA-----GWDQS 360


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 160/364 (43%), Gaps = 35/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P    +       ++ CG  +++ +      VY+ G  DFG
Sbjct: 34  WGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFG 93

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   ++     P  +  L  + V  ++ G  H+   T +G+L+ +G+N NGQ GLG  
Sbjct: 94  RLGTG-DVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLG-- 150

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +    P  V  L G      A G E S+ VT  G+V  WG G  G +G G+       
Sbjct: 151 SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGE------- 203

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             S   + P L K LEGVKV     G+ HS  +DE G +Y +G  A  +++  +      
Sbjct: 204 --SQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYV 261

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  +     V  G  HT    S G L+  G N+ G  G+G  + +   ++V+    E
Sbjct: 262 PKRVEAVQQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGE 321

Query: 341 SPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    +V V  GWKHT A++  GK  +W            G +  GQLGH    D 
Sbjct: 322 --------RVVQVKSGWKHTMAVTHTGKFFSW------------GRNVNGQLGHSGMQDS 361

Query: 400 IHPT 403
             P 
Sbjct: 362 NSPV 365



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 156/358 (43%), Gaps = 40/358 (11%)

Query: 76  LACGGAHTLFLTET---GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           LACG +H+L L  T     V + G  + GQLG  +           S L +    +  G 
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGA 71

Query: 133 HHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            +S A+   D ++Y WG    G+LG G    K + IP  +  L+G      A G   ++ 
Sbjct: 72  EYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKDVFIPCPLPALAGRRVASVACGDTHTLV 129

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            T  G++ ++G   +G+ G       LG ++   E  P+L+  L+G +V   A G  HS 
Sbjct: 130 ATAEGQLFAFGRNQNGQCG-------LGSIQDCLE--PQLVTALQGKEVVAVACGAEHSM 180

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
           C+   G VY +G      +   E      P+L   L      +V CG  H+  +  GG +
Sbjct: 181 CVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKI 368
           YTWG      L  G     + P+RV+       V Q+ T    V+ GW+HT AA S+G++
Sbjct: 241 YTWGWGAYAQLMQGDRKDHYVPKRVEA------VQQVAT----VAGGWRHTMAADSQGRL 290

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              GW      F + G      +GH  DV  +       GE V  +QV  G+ HT A+
Sbjct: 291 FASGW----NKFGQCG------VGHNEDVVRVQQVEALAGERV--VQVKSGWKHTMAV 336



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 124/312 (39%), Gaps = 86/312 (27%)

Query: 122 KKEVVQISTGYHHSSAI--TVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           + EV+ ++ G  HS A+  T  G + + WG+  +GQLG G   A+    P  V  L    
Sbjct: 6   EPEVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGD--AEDRQEPQAVFSLLHRG 63

Query: 179 TKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
                 G E S+AV GG K V SWG G  GRLG G    +         + P  +  L G
Sbjct: 64  ATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDV---------FIPCPLPALAG 114

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
            +V                                                    V CG 
Sbjct: 115 RRVA--------------------------------------------------SVACGD 124

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            HT V T+ G+L+ +G N+NG  G+GSI     P+ V     +         +V V+CG 
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKE--------VVAVACGA 176

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
           +H+  + SEG++  WGWG              G +G G   D   PT+    E VK  QV
Sbjct: 177 EHSMCVTSEGEVYCWGWG------------RYGNIGDGESQDRHLPTLAKGLEGVKVAQV 224

Query: 417 SCGFNHTGALLE 428
           +CG+ H+ A+ E
Sbjct: 225 NCGWRHSIAVDE 236


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  130 bits (327), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 108/354 (30%), Positives = 167/354 (47%), Gaps = 41/354 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           ++CG +H+ F+TE G ++  G N+ GQLG+    G   +P+ +  LK E  Q ++ G  H
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIK-GPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   T  GE+   G NS+GQLGLG     +     +  C      K  + G   S A+T 
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI-KLLSAGDHTSAALTE 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
            G++  WG   +G+LG G +S  L            L +EL  G  +   + G+ HSA +
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHAL------------LPQELNMGQSIHWVSCGYRHSALV 204

Query: 254 DENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            ++G VY FG+ A  ++     Q  NH+  P  +  L    +V CGG HT  LT   ELY
Sbjct: 205 TDSGDVYTFGESADGRLGLSAHQLANHSY-PQRVESLRSVLQVACGGKHTLALTED-ELY 262

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            +G  E G LG+G +  +       G F +  V         V+CG +H+A I++  +L 
Sbjct: 263 CFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVTH-------VTCGEQHSALITDSGLLY 315

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNH 422
                   TF +  H   G+LGHG++   +   PT+         + V+CG +H
Sbjct: 316 --------TFGDGRH---GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358



 Score =  122 bits (305), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 51/349 (14%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + +TG V+      FG+  I+ +      P R+  LK ++ V IS G  HS+ +T  G L
Sbjct: 7   IPDTGAVFT-----FGKSKIANS-----APSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +++G N+ GQLGL  K     P+  KV  L G   +  A G + ++  T  G++L+ G  
Sbjct: 56  FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113

Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G+LG G  +  + F  LR   +Y P          +K+ +AG   SA + E+GR++++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLW 163

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           GD +  ++ F   +HA  P  ++       V CG  H+ ++T  G++YT+G + +G LG+
Sbjct: 164 GDNSAGQLGFGNDSHALLPQELNMGQSIHWVSCGYRHSALVTDSGDVYTFGESADGRLGL 223

Query: 323 GSIDVL-HS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTF 380
            +  +  HS P+RV+             S++ V+CG KHT A++E ++  +G G      
Sbjct: 224 SAHQLANHSYPQRVES----------LRSVLQVACGGKHTLALTEDELYCFGGG------ 267

Query: 381 SEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 428
                   GQLG G  V     P  V      +   V+CG  H+  + +
Sbjct: 268 ------EFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSALITD 310



 Score =  112 bits (281), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 101/358 (28%), Positives = 159/358 (44%), Gaps = 28/358 (7%)

Query: 7   TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
           +A ++ +LK DI +    G       +   R F  ++G+ + G+LGL       +PV   
Sbjct: 24  SAPSRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVK 81

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEV 125
             +    +++ACG  HTL  T  G + A G N  GQLG+   N   S + LR       +
Sbjct: 82  VLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI 141

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             +S G H S+A+T DG L++WG NS GQLG G  +  ++P     E   G      + G
Sbjct: 142 KLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----QELNMGQSIHWVSCG 197

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
           +  S  VT  G V ++G    GRLG       L   +  +   P+ ++ L  V +++A  
Sbjct: 198 YRHSALVTDSGDVYTFGESADGRLG-------LSAHQLANHSYPQRVESLRSV-LQVACG 249

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
           G  H+  + E+  +Y FG     ++ L      A  P  +          V CG  H+ +
Sbjct: 250 G-KHTLALTED-ELYCFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSAL 307

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-SIVLVSCGWKH 359
           +T  G LYT+G   +G LG       H  E     F+ +   +    S++ V+CG  H
Sbjct: 308 ITDSGLLYTFGDGRHGKLG-------HGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 160/317 (50%), Gaps = 21/317 (6%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG  + SL ++ RP + +A E + +    CG AH+L LT  G VY+ G N  G
Sbjct: 372 GNNDHGQLGHDVESLPNK-RPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVG 430

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   +    + P  I  +  K+VVQI+ G++H  A+T  GELY WG N+ GQLGLG  
Sbjct: 431 QLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMT 490

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV   PT V+ L+G+     A G   S AV+  G +  WG    G+LG    +     
Sbjct: 491 NEKV-STPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 544

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  ++ L  + V+  + G   S  +   G V+  G     ++     N+   
Sbjct: 545 ----SRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEIL 600

Query: 281 PSLISKLPYSE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P ++ +L  S+  ++ CG  HT   + S G++Y +G +  G LGIG +   ++P+ V+GP
Sbjct: 601 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGP 660

Query: 338 FSESPVDQICTSIVLVS 354
           +      QI T  V +S
Sbjct: 661 WQS----QILTFSVQMS 673



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 156/334 (46%), Gaps = 34/334 (10%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHS 135
           ACG +HTL LT  G +Y+ G ND GQLG       +  P  ++ L+  ++ Q   G  HS
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHS 412

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+T  G++Y WG N+ GQLG      + I IP  +  ++     Q A G    +A+T  
Sbjct: 413 LALTNWGQVYSWGSNAVGQLGQETDTTRQI-IPRLIRSIAAKQVVQIAAGHYHCLALTNS 471

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G++ +WG+   G+LG G  +  +         TP L++ L GV +   A G  HS  + +
Sbjct: 472 GELYAWGSNAYGQLGLGMTNEKVS--------TPTLVQSLAGVPIAFIACGGNHSFAVSK 523

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG 313
           +G ++ +G     ++   + N  + P+ +  L       V CG   +  LT+GG ++T G
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCG 583

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTW 371
           +   G LG GS +    P  V         + + + I  ++CG +HT A   S GKI  +
Sbjct: 584 AGTFGQLGHGSCNNEILPRMV--------FELMGSKITQIACGRRHTLAFVPSRGKIYGF 635

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           G  G             GQLG G   +Y  P IV
Sbjct: 636 GLSGV------------GQLGIGIVGNYNTPQIV 657



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 145/312 (46%), Gaps = 39/312 (12%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTK 180
           KE+ + + G  H+  +T DG++Y  G N +GQLG      + +P   P  +  L      
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLG---HDVESLPNKRPQLLTALENYIIT 403

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QA  G   S+A+T  G+V SWG+   G+L  GQE+       +T +  PRLI+ +   +V
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQL--GQETD------TTRQIIPRLIRSIAAKQV 455

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
              AAG  H   +  +G +Y +G  A  ++ L         P+L+  L   P +  + CG
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIA-FIACG 514

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G H+  ++  G ++ WG N  G LG+  ++    P +++   S          +  VSCG
Sbjct: 515 GNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRS--------LGVRYVSCG 566

Query: 357 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
              +  ++  G + T G     GTF        GQLGHG+  + I P +V      K  Q
Sbjct: 567 DDFSVFLTAGGGVFTCG----AGTF--------GQLGHGSCNNEILPRMVFELMGSKITQ 614

Query: 416 VSCGFNHTGALL 427
           ++CG  HT A +
Sbjct: 615 IACGRRHTLAFV 626



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 12/176 (6%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LGLG + E    P +  +     +  +ACGG H+  ++++G ++  G N FG
Sbjct: 477 WGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 536

Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG+    S      L  LR  G++     +S G   S  +T  G ++  G  + GQLG 
Sbjct: 537 QLGLNDLNSRQFPTQLRTLRSLGVR----YVSCGDDFSVFLTAGGGVFTCGAGTFGQLGH 592

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
           G    ++  +P  V  L G    Q A G   ++A V   GK+  +G  G G+LG G
Sbjct: 593 GSCNNEI--LPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIG 646


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 173/382 (45%), Gaps = 48/382 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV      +  + A+  G +H+L L   G V+A G N  GQ
Sbjct: 110 WGDNPNGQLGEGTTTRRLVPVQVQGLSE--VVAVTAGSSHSLALRSDGTVWAWGANASGQ 167

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+ + GL  EVV +  G  HS A+  DG ++ WG N++GQLG G    
Sbjct: 168 LGEGTTTNR-LVPVPVLGL-SEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P    V+ LSG+   +A  G+  S+AV   G V +WG   SG+LG   + ++     
Sbjct: 226 RLVP----VQVLSGVVAMEAGSGY--SLAVRNDGTVWAWGYNFSGQLG---DDTV----- 271

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            TS  TP  +  L   +V   AAG   S  +  +G V+ +G    D     EG  + R  
Sbjct: 272 -TSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVWAWGSN--DYGQRGEGTTSNRAF 326

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P     L     V  G  H+  + S G ++ WGSN +G LG G+      P +VQG    
Sbjct: 327 PVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQG---- 382

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                  + +V VS G   + AI S+G +  W            G ++ GQLG G   D 
Sbjct: 383 ------LSGVVAVSAGASSSLAIRSDGTVWAW------------GSNASGQLGDGTTTDR 424

Query: 400 IHPTIVNFGENVKALQVSCGFN 421
           + P  V     V A+     F+
Sbjct: 425 LVPVQVQGLSGVVAVVAGTSFS 446



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 161/330 (48%), Gaps = 32/330 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN   G+LG G+ ++R  PV      +  + A A G  H+L L   G V+A G N +GQL
Sbjct: 11  GNNGSGQLGDGTRDNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAWGYNGYGQL 68

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G + ++G   EP+++ GL    V +  G++HS A+  DG ++ WG N NGQLG G    +
Sbjct: 69  G-NGSLGSRAEPVQVQGLSGG-VSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRR 126

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
           ++P+  +V+ LS +    A  G   S+A+   G V +WGA  SG+LG G          +
Sbjct: 127 LVPV--QVQGLSEVVAVTA--GSSHSLALRSDGTVWAWGANASGQLGEGT---------T 173

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T+   P  +  L   +V    AG  HS  +  +G V+ +G  A  ++   +G   +R   
Sbjct: 174 TNRLVPVPVLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQL--GDGTTTKRLVP 229

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
           +  L     +  G  ++  + + G ++ WG N +G LG  ++    +P +V G       
Sbjct: 230 VQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLG------- 282

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
               + +V V+ G   + A+ S+G +  WG
Sbjct: 283 ---LSEVVAVAAGSSLSLALRSDGTVWAWG 309



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 165/356 (46%), Gaps = 46/356 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  ++ SR  PV      +  + A+A G + +L L   G V+A G ND+GQ
Sbjct: 258 WGYNFSGQLGDDTVTSRSTPVQVLGLSE--VVAVAAGSSLSLALRSDGTVWAWGSNDYGQ 315

Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            G   + N  +   P++  GL   V  ++ GY HS A+  DG ++ WG N++GQLG G  
Sbjct: 316 RGEGTTSNRAF---PVQARGLSGGVA-VAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTT 371

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +  P+  +V+ LSG+    A  G   S+A+   G V +WG+  SG+LG G        
Sbjct: 372 SNRSEPV--QVQGLSGVVAVSA--GASSSLAIRSDGTVWAWGSNASGQLGDGT------- 420

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P  ++ L GV   +A   F  S  +  +G V+ +G     ++          
Sbjct: 421 --TTDRLVPVQVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVLV 476

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  ++ L     V  G  H+  + S G ++  G N+NG LG GS     +P +V G    
Sbjct: 477 PVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQVTG---- 532

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                  + +V V+ G  H+ A+  +G +  W            G++S GQLG G+
Sbjct: 533 ------LSGVVSVAAGDSHSLAVRYDGSVWAW------------GYNSFGQLGDGS 570



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 169/396 (42%), Gaps = 77/396 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ DYG+ G G+  +R  PV           A+A G AH+L +   G V+A G N  GQ
Sbjct: 308 WGSNDYGQRGEGTTSNRAFPVQARGLSGG--VAVAAGYAHSLAVRSDGTVWAWGSNASGQ 365

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S EP+++ GL   VV +S G   S AI  DG ++ WG N++GQLG G    
Sbjct: 366 LGEGTTSNRS-EPVQVQGLSG-VVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTD 423

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P+  +V+ LSG+    A   F  S+AV   G V  WG  G G+LG      +L    
Sbjct: 424 RLVPV--QVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVL---- 475

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
                 P  +  L GV     AAG LHS  +  +G V+  G    D     +G+   R  
Sbjct: 476 -----VPVQVTGLSGVVA--VAAGNLHSLAVRSDGTVWALGRN--DNGQLGDGSWTNRSA 526

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG---- 336
           P  ++ L     V  G  H+  +   G ++ WG N  G LG GS     +P +V G    
Sbjct: 527 PVQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGR 586

Query: 337 -------PFSES-----------------------------PVD-QICTSIVLVSCGWKH 359
                   +S +                             PV  Q    +V V  G  H
Sbjct: 587 GSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLRGVVAVEVGSSH 646

Query: 360 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           + A+ S+G + TWG            ++S GQLG+G
Sbjct: 647 SLALRSDGTVWTWG------------YNSFGQLGNG 670



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 157/348 (45%), Gaps = 44/348 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV      +  + A+  G +H+L L   G V+A G N  GQ
Sbjct: 160 WGANASGQLGEGTTTNRLVPVPVLGLSE--VVAVEAGSSHSLALRSDGTVWAWGANASGQ 217

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++      VV +  G  +S A+  DG ++ WG N +GQLG     +
Sbjct: 218 LGDGTTT-KRLVPVQV---LSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTS 273

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LS +     A G   S+A+   G V +WG+   G+ G G  S       
Sbjct: 274 RSTPV--QVLGLSEVVA--VAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTS------- 322

Query: 223 STSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             +   P   + L  GV V   AAG+ HS  +  +G V+ +G  A  ++   EG  + R 
Sbjct: 323 --NRAFPVQARGLSGGVAV---AAGYAHSLAVRSDGTVWAWGSNASGQL--GEGTTSNRS 375

Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +  L     V  G   +  + S G ++ WGSN +G LG G+      P +VQG   
Sbjct: 376 EPVQVQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQG--- 432

Query: 340 ESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG----GSHGTFSE 382
                   + +V V  G   + A+ ++G +  WGWG    G  GTF+ 
Sbjct: 433 -------LSGVVAVVAGTSFSLAVRNDGTV--WGWGYNGYGQLGTFTS 471



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 137/286 (47%), Gaps = 34/286 (11%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           G V+A G N  GQLG       S  P+++ GL  EVV  + G  HS A+  DG ++ WG 
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDNRS-TPVQVLGLS-EVVAAAAGSIHSLALRNDGTVWAWGY 62

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N  GQLG G   ++  P+  +V+ LSG  +  A  G   S+AV   G V +WG   +G+L
Sbjct: 63  NGYGQLGNGSLGSRAEPV--QVQGLSGGVSVDA--GHYHSLAVRDDGTVWAWGDNPNGQL 118

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G          +T    P  ++ L   +V    AG  HS  +  +G V+ +G  A  +
Sbjct: 119 GEGT---------TTRRLVPVQVQGLS--EVVAVTAGSSHSLALRSDGTVWAWGANASGQ 167

Query: 270 MLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   EG    R   +  L  SE V    G  H+  L S G ++ WG+N +G LG G+   
Sbjct: 168 L--GEGTTTNRLVPVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGT--- 222

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
             + +R+       PV Q+ + +V +  G  ++ A+ ++G +  WG
Sbjct: 223 --TTKRL------VPV-QVLSGVVAMEAGSGYSLAVRNDGTVWAWG 259



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 128/285 (44%), Gaps = 46/285 (16%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           DG ++  G N +GQLG G +  +  P+  +V  LS +    AA G   S+A+   G V +
Sbjct: 4   DGTVWAAGNNGSGQLGDGTRDNRSTPV--QVLGLSEVVA--AAAGSIHSLALRNDGTVWA 59

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRV 259
           WG  G G+LG+G        L S +E  P  ++ L  GV V    AG  HS  + ++G V
Sbjct: 60  WGYNGYGQLGNGS-------LGSRAE--PVQVQGLSGGVSVD---AGHYHSLAVRDDGTV 107

Query: 260 YIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
           + +GD    ++   EG   RR  P  +  L     V  G  H+  L S G ++ WG+N +
Sbjct: 108 WAWGDNPNGQL--GEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANAS 165

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
           G LG G+      P  V G           + +V V  G  H+ A+ S+G +  W     
Sbjct: 166 GQLGEGTTTNRLVPVPVLG----------LSEVVAVEAGSSHSLALRSDGTVWAW----- 210

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
                  G ++ GQLG G     + P  V  G  V A++   G++
Sbjct: 211 -------GANASGQLGDGTTTKRLVPVQVLSG--VVAMEAGSGYS 246



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 27/176 (15%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGYHTCVLTSGGELY 310
           +  +G V+  G+    ++   +G    R + +  L  SE V    G  H+  L + G ++
Sbjct: 1   MRPDGTVWAAGNNGSGQL--GDGTRDNRSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVW 58

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            WG N  G LG GS+     P +VQG           +  V V  G  H+ A+ +   + 
Sbjct: 59  AWGYNGYGQLGNGSLGSRAEPVQVQG----------LSGGVSVDAGHYHSLAVRDDGTV- 107

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           W W          G +  GQLG G     + P  V     V A  V+ G +H+ AL
Sbjct: 108 WAW----------GDNPNGQLGEGTTTRRLVPVQVQGLSEVVA--VTAGSSHSLAL 151


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 179/404 (44%), Gaps = 48/404 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
           WG G  G+LG   LE    P +       S   +  LACGGAH L LT  G V   G   
Sbjct: 17  WGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGT 76

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG  + +  SL+P  +  L+  V+  +S G+ HS  ++  G L+  G  S GQLG G
Sbjct: 77  SGQLGHGDMVS-SLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHG 135

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +   P+  KV         Q A G   S+ +  G +V  +G+G  G+LG   +++  
Sbjct: 136 DCKSHCSPV--KVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLGVSMDNT-- 191

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
              RS S   P+    LEGV++    A   HSA +  NG +Y +G        F   +  
Sbjct: 192 ---RSIS--VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG------FGSTSDV 240

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG----------IGSIDV- 327
             P  +       +V  G  H  VLT GGE++  G N +G LG          +  I+V 
Sbjct: 241 HCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVF 300

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHS 386
           LH PE  +    E        ++V ++ G +H+A ++E +++ TWGWG            
Sbjct: 301 LHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWG------------ 348

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKA----LQVSCGFNHTGAL 426
             GQLG GN  D I P  V  G  +      ++V CG   T A+
Sbjct: 349 EHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 392



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSW 201
           E++ WG  ++GQLG  +   + +P    +   S        A G    +A+T  GKV++W
Sbjct: 13  EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 72

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G SG+LGHG   S L          P+ +K LE   +   +AG+ HS  + + G ++ 
Sbjct: 73  GRGTSGQLGHGDMVSSL---------QPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFT 123

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            GD +  ++   +      P  +S     + +++ CG  H+ VL  G ++Y +GS + G 
Sbjct: 124 CGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQ 183

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
           LG+ S+D   S    Q       V+     I+ +     H+AA+S  G + TWG G
Sbjct: 184 LGV-SMDNTRSISVPQATVGLEGVE-----IISIDANGDHSAALSANGHLYTWGRG 233



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 22/149 (14%)

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P   S  P S  + CGG H   LT+ G++ TWG   +G LG G +     P+ V+    E
Sbjct: 42  PRFSSAGPISL-LACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVK--LLE 98

Query: 341 SPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
           S V      +  VS GW H+  +S+ G + T G G            S GQLGHG+   +
Sbjct: 99  SFV------MTHVSAGWSHSGFVSDTGCLFTCGDG------------SFGQLGHGDCKSH 140

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
             P  V++ ++    Q++CG  H+  LL+
Sbjct: 141 CSPVKVSYFDSKHVDQIACGMRHSLVLLK 169


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 157/391 (40%), Gaps = 37/391 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G+      PV  +     ++ A+A G  H+L +T  G   A G N FGQ
Sbjct: 65  WGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQ 124

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    I  S  P+ +       V  +S G  H+ A+T  G    WG N  GQLG G   
Sbjct: 125 LGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTT 184

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V   +G      A G   S+AVT  G  L+WG   SG+LG G         
Sbjct: 185 RSRTPV--AVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGT-------- 234

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T    P       G  +   AAG LHS  +   G V  +G     ++       +  P
Sbjct: 235 -ATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTP 293

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             +  +P    V     GG H+  +TS G++  WG N  G LG GS     +P  V  P 
Sbjct: 294 VAV-DVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPA 352

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                    T+I  V+ G  H+ A+ S    L WG      TF        GQLG G+  
Sbjct: 353 G--------TTITAVATGSGHSLAVTSTDTALAWG----DNTF--------GQLGDGSTT 392

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             I P  V+         ++ G  H+ A++ 
Sbjct: 393 SSIIPVAVDLPAGTTVTAIAGGSFHSLAIVP 423



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 123/336 (36%), Gaps = 71/336 (21%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S+A    G    WG NS G+LG G       P+   V   +G      A G   S+AVT 
Sbjct: 53  SAAAGPPGTGLAWGTNSAGRLGDGTTTDSSSPV--SVNVPAGTTITAVAGGAGHSLAVTS 110

Query: 195 GGKVLSWGAGGSGRLGHG---QESSI---------------------------------- 217
            G  L+WG    G+LG G     SS                                   
Sbjct: 111 AGTALAWGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAW 170

Query: 218 -------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
                  LG   +T   TP  +    G  +   AAG  HS  +   G    +GD +  ++
Sbjct: 171 GDNFWGQLGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQL 230

Query: 271 LFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
                  +  P + + +P       V  GG H+  LTSGG++  WG+N +G LG G+   
Sbjct: 231 GDGTATDSSIP-VAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTS 289

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 386
             +P  V  P          T++  V+ G +H+ A+ S G +L W            G +
Sbjct: 290 SSTPVAVDVPAG--------TTVTAVAAGGRHSLAVTSAGDVLAW------------GDN 329

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           + GQLG G+      P  VN         V+ G  H
Sbjct: 330 TAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGH 365


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 171/363 (47%), Gaps = 48/363 (13%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG+G+ E S + P  C  F+   LK +ACG  H+LFL   G VY  G N  G
Sbjct: 5   WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64

Query: 102 QLG------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           QLG        E +G +L+  +ISG       +S G  HS A+   G+++ WG    GQL
Sbjct: 65  QLGHDKGGSRPELVG-ALDAQKISG-------VSCGQAHSLAVNEQGQVFAWGAGDGGQL 116

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
           GLG  A + + +P  ++ L      Q   G    +A++  G++  WG   SG+LG G+ E
Sbjct: 117 GLG-TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGE 175

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            S L         +P+ +K L G+ +   +AG  HS  +  +G V+ +G  +  ++   +
Sbjct: 176 PSTL---------SPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND 226

Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                 P  I K   S++VV   CG  HT  LT  G L+T+G+   G LG  S      P
Sbjct: 227 EQDRAVPCHI-KFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLP 285

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 391
            RV        ++ + T +  ++CG  HT A      L + +G           ++ GQL
Sbjct: 286 RRV--------MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGC----------NTQGQL 327

Query: 392 GHG 394
           G G
Sbjct: 328 GTG 330



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 150/336 (44%), Gaps = 45/336 (13%)

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLGI  +     EP        + + +++ G  HS  +  DG +Y  G NS GQLG  K
Sbjct: 11  GQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDK 70

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++    P  V  L        + G   S+AV   G+V +WGAG  G+LG G     + 
Sbjct: 71  GGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAV- 125

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    PRLIK+L   ++     G  H   + ++G+++++G+ +  ++   +G    
Sbjct: 126 -------RVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKG---- 174

Query: 280 RPSLISKLPYSE-------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            PS +S  P          ++  GG H+  L+  G ++ WG N  G LG+        P 
Sbjct: 175 EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPC 234

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 391
            ++   S+         +V +SCG +HTAA++ EG + T+G G            S GQL
Sbjct: 235 HIKFLRSQK--------VVYISCGEEHTAALTKEGGLFTFGNG------------SKGQL 274

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GH +  +   P  V      +  Q++CG NHT A +
Sbjct: 275 GHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFV 310



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 126/285 (44%), Gaps = 37/285 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +  GQLG+G   A V   P       G   K+ A G + S+ +   G V + G+   
Sbjct: 5   WGSSGAGQLGIGASEASVFE-PRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSC 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +  S            P L+  L+  K+   + G  HS  ++E G+V+ +G   
Sbjct: 64  GQLGHDKGGS-----------RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGD 112

Query: 267 VDKMLFQEGNHARR-PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++       A R P LI KL      +V+CG +H   L+  G+L+ WG N +G LG+G
Sbjct: 113 GGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
             +            S  P+  +C   +  +S G  H+ A+S  G +  WG         
Sbjct: 173 KGE--------PSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWG--------- 215

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               +S GQLG  ++ D   P  + F  + K + +SCG  HT AL
Sbjct: 216 ---KNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)

Query: 42  LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG    G+LGLG  E S   P    +     L  ++ GG H+  L+ +G V+  G N  
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+++    ++ P  I  L+ ++VV IS G  H++A+T +G L+ +G  S GQ  LG 
Sbjct: 220 GQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ--LGH 276

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
            + +  P+P +V  L G    Q A G   ++A V   G + ++G    G+LG G
Sbjct: 277 DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL   + R  P          +  ++CG  HT  LT+ G ++  G    GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P R+  L   EV QI+ G +H+ A +   G +Y +G N+ GQLG G +
Sbjct: 274 LGHDSTRNEPL-PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332

Query: 161 AAKVIPIPT---KVECLSGIFTK 180
            +   P+P    +  C+   +T+
Sbjct: 333 GSAKSPVPVSNIQPLCIGNAYTR 355


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 174/370 (47%), Gaps = 39/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P      E  +++ +ACG  +T+ +T+ G VY+ G ND+
Sbjct: 4   WGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  +I+ G  H+ A+   G+L+ WG N NGQLGL  
Sbjct: 64  GQLG-HEKARKRLQ--LIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  +P  ++ L      Q A G E S+A+T  G++ +WG+   G+LG G       
Sbjct: 121 VDCTE-RVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGS------ 173

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T+E  P+ I  L  V +   A G  H+  I ++G V+ +G     ++   +     
Sbjct: 174 --YTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG G+      P +V   
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQV--- 288

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + +++  +SCG +HT A+  S G++  WG GG+            GQLG+  
Sbjct: 289 -----MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNRA 331

Query: 396 DVDYIHPTIV 405
                 P +V
Sbjct: 332 SQSATTPQVV 341



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 156/337 (46%), Gaps = 46/337 (13%)

Query: 101 GQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LG+     ENI    E   I      V QI+ G +++ AIT +G++Y  G N  GQLG
Sbjct: 10  GELGLGGIEDENIFMPREVDFIEA--SNVEQIACGENYTVAITKEGKVYSCGNNDYGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             K   ++  IP     L     ++ A G   ++AV   G++ SWG   +G+LG      
Sbjct: 68  HEKARKRLQLIPG----LDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS--- 120

Query: 217 ILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
                   +E  PR+IK L   V V+IA  G  HS  +  +G +Y +G     ++     
Sbjct: 121 -----VDCTERVPRMIKVLGTNVIVQIAC-GTEHSIALTNDGELYAWGSNREGQLGLGSY 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                  +R S ++ +P +  + CGGYHT V++  G +++WG N  G LG+  +   + P
Sbjct: 175 TTTEIKPKRISTLAAVPIAF-IACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLP 233

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
            +++   +     ++C +    +CG + +  ++ +G + T G G              GQ
Sbjct: 234 CQLRTLRNA----KVCYA----TCGEEFSVFLTMDGGVFTCGAGMY------------GQ 273

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGHGN  + I P  V         Q+SCG  HT AL+
Sbjct: 274 LGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALV 310


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 17/329 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG   +  R RP +  A E  ++  L+CG  H+L +   G V+A G    GQL
Sbjct: 46  GDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P+++  L   +++Q+S G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 106 GIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFL 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V+ L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 166 SQ-ESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNV 218

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y PR I  L+ + V   + G  H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 219 PVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQ 278

Query: 283 LISKLP-YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           L+  +     ++ CG YHT V       Y + + +    G G  D   S  R       S
Sbjct: 279 LVEGIDGLVSQIDCGSYHTLV-------YVYTTRQVISFGRGPSDTTSS-TRSDALTKNS 330

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILT 370
            V  + ++  LV+   KH  A +    +T
Sbjct: 331 DVSCLISADDLVNVQVKHIFAGTYANFVT 359



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 155/317 (48%), Gaps = 27/317 (8%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           L+  A G  H+L L   G V+A G N  GQLG    + +   P  I  L+   V  +S G
Sbjct: 23  LRQAASGERHSLLLLSDGTVHACGDNSCGQLG-RRGVPHRKRPGLIQALETLNVDLLSCG 81

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G +  ++   P KV+ L+GI   Q + G   S+A
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKELNFTPMKVKALAGIKIIQVSCGHYHSLA 140

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG    G+LG G+E     FL   S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 141 LSQDGQVFSWGNNSHGQLGLGKE-----FL---SQESPQRVKSLEGIPLAQVAAGGAHSF 192

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
            +  +G  + +G     ++     N    + +P  I  L       + CG  HT VLT  
Sbjct: 193 ALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQD 252

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA--AIS 364
           G+++T+G N +G LG G       P+ V+G      +D + + I    CG  HT     +
Sbjct: 253 GKVFTFGDNSSGQLGHGPTAEKRGPQLVEG------IDGLVSQI---DCGSYHTLVYVYT 303

Query: 365 EGKILTWGWGGSHGTFS 381
             +++++G G S  T S
Sbjct: 304 TRQVISFGRGPSDTTSS 320



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 149/307 (48%), Gaps = 38/307 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  DG ++  G NS GQ  LG++       P  ++ L  +     +
Sbjct: 22  ELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDLLS 79

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   +         +TP  +K L G+K+   
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEL--------NFTPMKVKALAGIKIIQV 131

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++G+V+ +G+ +  ++     F      +R   +  +P + +V  GG H
Sbjct: 132 SCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLA-QVAAGGAH 190

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   + ++   +V +SCG +H
Sbjct: 191 SFALSLSGTSFGWGSNNAGQLALSGNNV---PVQSYKPRSIGALKEL--GVVYISCGSEH 245

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA ++ +GK+ T+            G +S GQLGHG   +   P +V   E +  L  Q+
Sbjct: 246 TAVLTQDGKVFTF------------GDNSSGQLGHGPTAEKRGPQLV---EGIDGLVSQI 290

Query: 417 SCGFNHT 423
            CG  HT
Sbjct: 291 DCGSYHT 297



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 28/237 (11%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P+   A     +  ++CG  H+L L++ G V++ 
Sbjct: 93  RVFA--WGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSW 150

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 151 GNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 210

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   +   +P+    P  +  L  +     + G E +  +T  GKV ++G   SG+LG
Sbjct: 211 LAL---SGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLG 267

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           HG  +   G         P+L++ ++G+  +I    +        +  VY++  R V
Sbjct: 268 HGPTAEKRG---------PQLVEGIDGLVSQIDCGSY--------HTLVYVYTTRQV 307



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WGN  +G+LGLG    S+  P    + E   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 150 WGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 209

Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N     S +P  I  LK+  VV IS G  H++ +T DG+++ +G NS+GQLG G
Sbjct: 210 QLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHG 269

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
             A K    P  VE + G+ ++     +   V V    +V+S+G G S
Sbjct: 270 PTAEKR--GPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFGRGPS 315



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
           G +++ AA+G  HS  +  +G V+  GD +  ++  +   H +RP LI  L     + + 
Sbjct: 20  GAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLS 79

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG    L+ +P +V+              I+ V
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKA--------LAGIKIIQV 131

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENV 411
           SCG  H+ A+S +G++ +W            G++S GQLG G + +    P  V   E +
Sbjct: 132 SCGHYHSLALSQDGQVFSW------------GNNSHGQLGLGKEFLSQESPQRVKSLEGI 179

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 180 PLAQVAAGGAHSFAL 194


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 179/434 (41%), Gaps = 84/434 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+GRLG GS      PV  S      + A+A GGAHT  LT +G V+  G N +GQ
Sbjct: 77  WGGNDFGRLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGEVWCWGSNFYGQ 135

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A T  G ++ WG N  GQLG G    
Sbjct: 136 LGDGSYTTRS-TPVAVSGLPSGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTD 194

Query: 163 KVIPI-----PTKVECLS----------------------------GIFTKQA------- 182
           +  P+     P++V  ++                            G +T  +       
Sbjct: 195 RSTPVAVSGLPSEVTAIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSG 254

Query: 183 --------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                   A G   + A+TG G V  WGA  SG+LG+G     L F RS    TP  +  
Sbjct: 255 LPSGVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNG-----LTFGRS----TPGAVSG 305

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEV 293
           L    V   AAG  H+  +  +G V+ +G     ++          P  +S LP   E +
Sbjct: 306 LP-SGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSGVETI 364

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
             G YHTC L S G +  WG N+ G LG G+     +P  V G         + + +  +
Sbjct: 365 AAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSG---------LPSGVTAI 415

Query: 354 SCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           + G  HT A  S G +  W            G +S GQLG G+  D   P  V+ G    
Sbjct: 416 AAGRLHTCARTSSGGVWCW------------GDNSDGQLGDGSFTDSSTPVAVS-GLASG 462

Query: 413 ALQVSCGFNHTGAL 426
              ++ G  HT AL
Sbjct: 463 VETIAAGGWHTCAL 476



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 168/387 (43%), Gaps = 38/387 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG G+  +R  PV  S      + A+A G  HT   T +G V+  G N  GQ
Sbjct: 383 WGHNDRGQLGDGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQ 441

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +   S  P+ +SGL   V  I+ G  H+ A+T  G ++ WG+N++GQLG G    
Sbjct: 442 LG-DGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIY 500

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+   V  L    T  AA G   + A+TG G V  WG   +G+LG G          
Sbjct: 501 HITPV--AVSGLPSGVTAIAAGGV-HTCALTGSGGVWCWGGNFAGQLGDGT--------- 548

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   TP  +  L    V   AAG +H+  +  +G V+ +G     ++      +   P 
Sbjct: 549 TTDRSTPVAVSGLP-SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPV 607

Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  G  +TC LT  G ++ WG N +G L  G+     +P  V G  S  
Sbjct: 608 AVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTS-RSTPVAVSGLPSG- 665

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                     + + GW   A  S G +  WG  GS            GQLG G       
Sbjct: 666 -------VTAIAAGGWYTCARTSSGGVRCWGANGS------------GQLGDGTTTKRST 706

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLE 428
           P  V+ G       ++ G  HT AL+ 
Sbjct: 707 PVAVS-GLPSGVTAIAAGGEHTCALMS 732



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 159/365 (43%), Gaps = 37/365 (10%)

Query: 66  SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           S+F     + A+A GG HT   T +G V+  G NDFG+LG       S  P+ +SGL   
Sbjct: 47  SSFSPLQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSS-TPVAVSGLPSG 105

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V  I+ G  H+ A+T  GE++ WG N  GQLG G    +  P+   V  L    T  AA 
Sbjct: 106 VTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPV--AVSGLPSGVTAIAAG 163

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G+  + A T  G V  WG    G+LG G          +T   TP  +  L   +V   A
Sbjct: 164 GW-HTCARTSSGGVWCWGGNYRGQLGDGT---------TTDRSTPVAVSGLP-SEVTAIA 212

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
           AG  H+     +G V+ +G     ++       +  P  +S LP     +  GG HTC L
Sbjct: 213 AGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCAL 272

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           T  G +  WG+N +G LG G      +P  V G         + + +  ++ G  HT A+
Sbjct: 273 TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSG---------LPSGVTAIAAGDYHTCAL 323

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           + G    W WGG++           GQLG G       P  V+ G       ++ G  HT
Sbjct: 324 T-GSGGVWCWGGNY----------SGQLGDGTTTARSTPVAVS-GLPSGVETIAAGDYHT 371

Query: 424 GALLE 428
            AL+ 
Sbjct: 372 CALMS 376



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 132/284 (46%), Gaps = 21/284 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS      PV  S      + A+A GG HT  LT +G V+  G N  GQ
Sbjct: 485 WGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVWCWGGNFAGQ 543

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+T  G ++ WG N  GQLG G    
Sbjct: 544 LGDGTTTDRS-TPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTN 602

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A+TG G V  WG   SG+L  G          
Sbjct: 603 RSTPV--AVSGLPSGVTAIAA-GLRYTCALTGSGGVWCWGYNLSGQLDDG---------- 649

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +TS  TP  +  L      IAA G+ ++     +G V  +G     ++   +G   +R  
Sbjct: 650 TTSRSTPVAVSGLPSGVTAIAAGGW-YTCARTSSGGVRCWGANGSGQL--GDGTTTKRST 706

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           P  +S LP     +  GG HTC L S G ++ WG N++G LG G
Sbjct: 707 PVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDG 750



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 162/385 (42%), Gaps = 37/385 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G    R  P   S      + A+A G  HT  LT +G V+  G N  GQ
Sbjct: 281 WGANYSGQLGNGLTFGRSTPGAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGGNYSGQ 339

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G +H+ A+   G +  WG N  GQLG G   A
Sbjct: 340 LGDGTTTARS-TPVAVSGLPSGVETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTA 398

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A T  G V  WG    G+LG G          
Sbjct: 399 RSTPV--AVSGLPSGVTAIAA-GRLHTCARTSSGGVWCWGDNSDGQLGDGSF-------- 447

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L    V+  AAG  H+  +  +G V+ +G     ++      +   P 
Sbjct: 448 -TDSSTPVAVSGLA-SGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPV 505

Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  GG HTC LT  G ++ WG N  G LG G+     +P  V G     
Sbjct: 506 AVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSG----- 560

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
               + + +  ++ G  HT A++ G    W WGG+   F        GQLG G   +   
Sbjct: 561 ----LPSGVTAIAAGDIHTCALT-GSGGVWCWGGND--F--------GQLGDGTTTNRST 605

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V+ G       ++ G  +T AL
Sbjct: 606 PVAVS-GLPSGVTAIAAGLRYTCAL 629



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 6/172 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G+LG G+  +R  PV  S      + A+A G  +T  LT +G V+  G N  GQ
Sbjct: 587 WGGNDFGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQ 645

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           L   +       P+ +SGL   V  I+ G  ++ A T  G +  WG N +GQLG G    
Sbjct: 646 L--DDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTK 703

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           +  P+   V  L    T  AA G E + A+   G V  WG   SG+LG G+ 
Sbjct: 704 RSTPV--AVSGLPSGVTAIAA-GGEHTCALMSSGGVWCWGRNDSGQLGDGRP 752



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 29/206 (14%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           TS ++P     L+GV     AAG  H+     +G V+ +G     ++       +  P  
Sbjct: 46  TSSFSP-----LQGVTAI--AAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVA 98

Query: 284 ISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           +S LP     +  GG HTC LTS GE++ WGSN  G LG GS     +P  V G  S   
Sbjct: 99  VSGLPSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG-- 156

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                    + + GW   A  S G +  W WGG++           GQLG G   D   P
Sbjct: 157 ------VTAIAAGGWHTCARTSSGGV--WCWGGNY----------RGQLGDGTTTDRSTP 198

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
             V+ G   +   ++ G  HT A + 
Sbjct: 199 VAVS-GLPSEVTAIAAGDAHTCARMS 223



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+L  G+  SR  PV  S      + A+A GG +T   T +G V   G N  GQ
Sbjct: 638 WGYNLSGQLDDGT-TSRSTPVAVSGLPS-GVTAIAAGGWYTCARTSSGGVRCWGANGSGQ 695

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G ++ WG+N +GQLG G+   
Sbjct: 696 LGDGTTTKRS-TPVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLY 754

Query: 163 KVIPIPTKVECLSGIF 178
           +  P+        G++
Sbjct: 755 RTTPVDVVTSASWGVY 770


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG GS   R  PV     +   + A+A G  H+L L   G V+A G ND+GQ
Sbjct: 194 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 251

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + +S  P+ + GL  +VV ++ G  HS A+  DG ++ WG N  GQLG      
Sbjct: 252 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 309

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P   +VE L  +     A GF  S+AV  GG + SWG   SG+LG+G  SS      
Sbjct: 310 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 359

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L    V   AAG +HS  +  +G V+ +G     ++  +       P 
Sbjct: 360 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            +  L     V  G YH+  + +GG L+ WG N+ G LG     ++  P
Sbjct: 415 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 463



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 165/371 (44%), Gaps = 50/371 (13%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S+ R     A ++  ++A+A G  ++L L   G V+A G N  GQLG       S  P  
Sbjct: 107 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 165

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           + GL + V  ++ G  H+ A+  DG ++ WG N  GQLG G  A +  P+  +V  L G+
Sbjct: 166 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 222

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
                A G+  S+A+   G V +WG    G+LG+G          +    TP  +  L  
Sbjct: 223 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 271

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           V V +AA GF HS  +  +G V+ +G+    ++         +P  +  L     V  G 
Sbjct: 272 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 329

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
           YH+  + +GG L++WG+N +G LG GS      P  VQG            ++  V+ G 
Sbjct: 330 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG----------LGAVTSVAAGG 379

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ- 415
            H+ A+ ++G +  W            G +  GQLGH    +   P        V  LQ 
Sbjct: 380 MHSVAVQADGTVWAW------------GRNEEGQLGHERAPERATPV------RVPGLQG 421

Query: 416 ---VSCGFNHT 423
              V+ GF H+
Sbjct: 422 EVAVAAGFYHS 432


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  129 bits (324), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 27/324 (8%)

Query: 8   AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
           A +K++LK D+ L    G     + +   + F  ++G+ ++G+LGLG+  +  +P    A
Sbjct: 27  APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
            +   +K  ACG  HTL  T  G +YA G N+ GQLG+ + N   S   +     +  + 
Sbjct: 85  LKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            ++ G + S+A+T DG LYMWG NS GQ+GLGK++  + P    V    G      + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G + ++G   SG+LG   E       +  +   P+ + ++    V++A  G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253

Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
             H+  + EN  VY FG     ++     +F+    +R P ++        +   CG  H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
           T ++T  G LYT+G   +G LG+G
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLG 331



 Score =  119 bits (297), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 106/357 (29%), Positives = 160/357 (44%), Gaps = 46/357 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G ++  G N++GQLG+      + +P  +  LK E V+++  G  H
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALKSERVKLTACGRTH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
           +   T  G LY  G N+ GQLGLG    +     T    L   F KQ      A G   S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDR-----TSFH-LVEFFNKQGPIKMLAAGSNTS 153

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G G+ES+ L         TP+ +    G +V   + G+ H
Sbjct: 154 AALTQDGRLYMWGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202

Query: 250 SACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +  +G +Y FG++   K+        NH + P  ++ +P    +V CGG HT  LT 
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
             E+Y++G  + G LG G+        RV   F +  V          +CG  HTA I++
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKH-------AACGENHTALITD 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
             +L     G HG            LG  N  +   PT+     +     V+CG  H
Sbjct: 314 NGLLYTFGDGRHGKLG---------LGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361



 Score =  117 bits (292), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 44/346 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + E+G V+  G + F     S+    +  PLRIS           G  H++ +T +G+L+
Sbjct: 9   IPESGAVFTFGKSKFADNAPSKFWLKNDVPLRIS----------CGDEHTALVTENGKLF 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGLG K    +  PT V+ L     K  A G   ++  T  G + + G   
Sbjct: 59  MFGSNNWGQLGLGTKTT--VNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNN 116

Query: 206 SGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G+LG G   + +    +   ++  P          +K+ AAG   SA + ++GR+Y++G
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGP----------IKMLAAGSNTSAALTQDGRLYMWG 166

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +  ++   + ++A  P  +S       V CG YH+  +T  G LYT+G  ++G LG+ 
Sbjct: 167 DNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL- 225

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
                 S E++        V  I   +V V+CG  HT A++E ++ ++G G         
Sbjct: 226 ------STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTENEVYSFGLG--------- 270

Query: 384 GHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                GQLGHG  + +   P +V      +    +CG NHT  + +
Sbjct: 271 ---QFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD 313



 Score = 45.8 bits (107), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G G +G+LG G+   ESR  P V   F K  +K  ACG  HT  +T+ G +Y  G    
Sbjct: 267 FGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325

Query: 101 GQLGISE 107
           G+LG+ E
Sbjct: 326 GKLGLGE 332



 Score = 39.7 bits (91), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
           +G+G +G+LGLG  +  ++++P +C  F  + + ++ CGG H L L +
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  129 bits (324), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 177/384 (46%), Gaps = 46/384 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG G L  R  PV        S+ A+A GG H     + G ++  GLN +GQ
Sbjct: 949  WGLNSYGQLGGGPLSYRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 1006

Query: 103  LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG    +  SL P+++   GL   V  I+ G+ H+ A+  DG ++ WG N+ GQLG G  
Sbjct: 1007 LG-GGPLSQSLTPVQVQVQGLTG-VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTT 1064

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  + P+  +V+ L+G+    A  G   +VA+   G V +WG    G+LG G        
Sbjct: 1065 AQSLTPV--QVQGLTGVTAISA--GDAHTVALRRDGTVWAWGRNSWGQLGDGT------- 1113

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              +T   TP  ++ L GV     AAG LH+  + ++G V+ +G  +  ++      H   
Sbjct: 1114 --TTHRATPVQVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRAT 1169

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
            P  +  L     +  G  HT  L   G ++ WG N+ G LG G+     +P +VQG    
Sbjct: 1170 PVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQG---- 1225

Query: 341  SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                   T +  ++ G+ HTAA+  +G   TWG+            +  GQLG G   D 
Sbjct: 1226 ------LTGVTTIAAGYFHTAAVRQDGTAWTWGF------------NLWGQLGDGTFTDR 1267

Query: 400  IHPTIVNFGENVKALQVSCGFNHT 423
              P  V     V AL  + G+ HT
Sbjct: 1268 ATPVQVQGLTGVSAL--AAGYAHT 1289



 Score =  121 bits (304), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 110/383 (28%), Positives = 175/383 (45%), Gaps = 44/383 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN D G+LG G+   R+ PV           A+A G  HT+  ++ G V+  G N  GQ
Sbjct: 97  WGNNDDGQLGDGTTTRRFSPVQVMT----GATAIAAGIYHTVAASQDGTVWTWGRNSSGQ 152

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +I     P+++ GL   V  ++ G +HS+A+   G ++ WG N  GQLG G    
Sbjct: 153 LGDGTSI-QRFSPVQVQGLTG-VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQ 210

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V+ L+G+    A     ++VA+   G V +WG   SG+LG G          
Sbjct: 211 RLTPV--QVQGLTGVIAISA--NDSETVALRQDGTVWAWGNNSSGQLGDGT--------- 257

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T  +TP  +  L GV    A  GF  +  + ++G ++ +G  +  ++       + RP 
Sbjct: 258 TTVRFTPVQVLGLTGVTAIAAGGGF--AVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPE 315

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +   G HT  L   G L+ WG+N +G LG G+  V  +P +VQG      
Sbjct: 316 QVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQG------ 369

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                T +  ++ G+ +T A S+     W W          G +  GQLG G     + P
Sbjct: 370 ----LTGVTAIAAGYLYTVA-SKQDGTVWAW----------GDNEWGQLGDGTTTRRLTP 414

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V     V A  ++ G+ +T A
Sbjct: 415 VQVQGLTGVTA--IAAGYLYTVA 435



 Score =  117 bits (293), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 115/392 (29%), Positives = 175/392 (44%), Gaps = 38/392 (9%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
            Q R    WG+  +G+LG G+   R  PV         + A+A GG H     + G ++  
Sbjct: 738  QDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTW 795

Query: 96   GLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            GLN +GQLG    + Y L P+++ GL       I+ G  H+ A+  DG ++ WG N +GQ
Sbjct: 796  GLNSYGQLG-GGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G  A  + P+  +V+ L  + T  AA G+  + A    G + +WG    G+LG G  
Sbjct: 855  LGDGTTAQSLTPVQVQVQGLMDV-TAMAAGGYHMA-AAGQDGTLWTWGLNSYGQLGGGPL 912

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            S  L          P  ++ L  + V   AAG  H A   ++G ++ +G  +  ++    
Sbjct: 913  SYRL---------LPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGP 961

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             ++   P  +  L     +  GGYH       G L+TWG N  G LG G +    +P +V
Sbjct: 962  LSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQV 1021

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            Q         Q  T +  ++ G+ HT A+ +   + W WGG          ++ GQLG G
Sbjct: 1022 Q--------VQGLTGVAAIAAGFSHTLAVRQDGTV-WSWGG----------NAYGQLGDG 1062

Query: 395  NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 + P  V     V A  +S G  HT AL
Sbjct: 1063 TTAQSLTPVQVQGLTGVTA--ISAGDAHTVAL 1092



 Score =  114 bits (285), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 163/364 (44%), Gaps = 42/364 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG G+      PV         + A++ G AHT+ L   G V+A G N +GQ
Sbjct: 1051 WGGNAYGQLGDGTTAQSLTPVQVQGLT--GVTAISAGDAHTVALRRDGTVWAWGRNSWGQ 1108

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG      +   P+++ GL   V+ I+ G  H+ A+  DG ++ WG+NS GQLG G    
Sbjct: 1109 LG-DGTTTHRATPVQVQGLTG-VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTH 1166

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V+ L+G+     A G   +VA+   G V +WG    G+LG G          
Sbjct: 1167 RATPV--QVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGFNDLGQLGDGT--------- 1213

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +T   TP  ++ L GV     AAG+ H+A + ++G  + +G     ++          P 
Sbjct: 1214 TTRRLTPAQVQGLTGVTT--IAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPV 1271

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +  L     +  G  HT V+   G ++ WG+N    LG GS     +P +V+       
Sbjct: 1272 QVQGLTGVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEA------ 1325

Query: 343  VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 T    ++ G  HT A+S      WGW          G ++ GQ+G G   D   P
Sbjct: 1326 ----LTGAFSLAAGRFHTVAMSPDGA-GWGW----------GRNNLGQVGDGTTAD--RP 1368

Query: 403  TIVN 406
            T VN
Sbjct: 1369 TPVN 1372



 Score =  110 bits (275), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 107/384 (27%), Positives = 170/384 (44%), Gaps = 36/384 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+   R  PV        +  A+    + T+ + +   ++A G N +GQ
Sbjct: 695  WGLNSSGQLGDGTTTQRLTPVQVHGLTDAT--AILTSSSQTVAMRQDRTLWAWGDNHWGQ 752

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P+++ GL  +V  ++ G +H +A   DG L+ WG NS GQLG G  + 
Sbjct: 753  LG-DGTTTRRLTPVQVQGLM-DVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSY 810

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +++P+  +V+ L+       A G   +VAV   G V +WG+  SG+LG G  +  L    
Sbjct: 811  RLLPV--QVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSL---- 864

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 TP  ++    + V   AAG  H A   ++G ++ +G  +  ++     ++   P 
Sbjct: 865  -----TPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPV 919

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +  L     +  GGYH       G L+TWG N  G LG G +     P +VQG  S + 
Sbjct: 920  QVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMSVT- 978

Query: 343  VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                     + + G+   AA  +G + TWG             +S GQLG G     + P
Sbjct: 979  --------AMAAGGYHMAAAGQDGTLWTWGL------------NSYGQLGGGPLSQSLTP 1018

Query: 403  TIVNFGENVKALQVSCGFNHTGAL 426
              V          ++ GF+HT A+
Sbjct: 1019 VQVQVQGLTGVAAIAAGFSHTLAV 1042



 Score =  103 bits (257), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 165/365 (45%), Gaps = 42/365 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ ++G+LG G+   R  PV         + A+A G  +T+   + G V+A G N   Q
Sbjct: 395 WGDNEWGQLGDGTTTRRLTPVQVQGLT--GVTAIAAGYLYTVASKQDGTVWAWGDNKRSQ 452

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +     P  + GL+  +  I+     + A+  DG ++ WG N+ GQLG G    
Sbjct: 453 LG-EGAVSQRHTPGEVQGLEG-ITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTR 510

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V+ L+G+ T  AA  +   VAV   G V +WG G  G+LG G      G  R
Sbjct: 511 RLTPV--QVQGLAGV-TAVAASDY-HLVAVRQDGTVWAWGVGFWGQLGDGT-----GMDR 561

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST    P  ++ L GV     AAG  H+  + ++G V+ +G     ++          P 
Sbjct: 562 ST----PVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPV 615

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +  +  +  GG HT  L   G ++TWG N  G LG G+    HSP +VQG      
Sbjct: 616 QVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQG------ 669

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                  ++ ++    HT A+  +G + TWG             +S GQLG G     + 
Sbjct: 670 ----LADVIAIATNNGHTVAVRQDGTVWTWGL------------NSSGQLGDGTTTQRLT 713

Query: 402 PTIVN 406
           P  V+
Sbjct: 714 PVQVH 718



 Score =  100 bits (249), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 104/361 (28%), Positives = 159/361 (44%), Gaps = 43/361 (11%)

Query: 66  SAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           +AF   +   LA G G HTL + + G V+A G ND GQLG          P+++      
Sbjct: 67  NAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLG-DGTTTRRFSPVQV---MTG 122

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
              I+ G +H+ A + DG ++ WG+NS+GQLG G    +  P+  +V+ L+G+     A 
Sbjct: 123 ATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPV--QVQGLTGV--TAVAA 178

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   S A+  GG V +WG    G+LG G          ST   TP  ++ L GV     +
Sbjct: 179 GRNHSAALGQGGTVWTWGDNLVGQLGDGT---------STQRLTPVQVQGLTGVIA--IS 227

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
           A    +  + ++G V+ +G+ +  ++          P  +  L     +  GG     L 
Sbjct: 228 ANDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGGGFAVALR 287

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             G L+ WGSN  G LG G+    + PE+VQG           T +  ++    HT A+ 
Sbjct: 288 QDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQG----------LTGVTAIAASGIHTVALR 337

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +   L W W          G++S GQLG G       P  V     V A  ++ G+ +T 
Sbjct: 338 QDGTL-WAW----------GNNSSGQLGDGTTTVRFTPVQVQGLTGVTA--IAAGYLYTV 384

Query: 425 A 425
           A
Sbjct: 385 A 385



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 117/427 (27%), Positives = 178/427 (41%), Gaps = 72/427 (16%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG G L  R  PV        +  A+A G +HT+ + + G V+A G N  GQ
Sbjct: 795  WGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854

Query: 103  LGISENIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG       SL P  +++ GL  +V  ++ G +H +A   DG L+ WG NS GQLG G  
Sbjct: 855  LG-DGTTAQSLTPVQVQVQGL-MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPL 912

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES----- 215
            + +++P+  +V+ L  + T  AA G+  + A    G + +WG    G+LG G  S     
Sbjct: 913  SYRLLPV--QVQGLMDV-TAMAAGGYHMA-AAGQDGTLWTWGLNSYGQLGGGPLSYRLLP 968

Query: 216  -SILGFLRSTS-----------------------------------EYTPRLIKELEGVK 239
              + G +  T+                                     TP  ++      
Sbjct: 969  VQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTG 1028

Query: 240  VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
            V   AAGF H+  + ++G V+ +G  A  ++       +  P  +  L     +  G  H
Sbjct: 1029 VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGVTAISAGDAH 1088

Query: 300  TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
            T  L   G ++ WG N  G LG G+     +P +VQG           T ++ ++ G  H
Sbjct: 1089 TVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQG----------LTGVIAIAAGSLH 1138

Query: 360  TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            T A+ +   + W W          G +S GQLG G       P  V     V A  ++ G
Sbjct: 1139 TVALRQDGTV-WAW----------GRNSWGQLGDGTTTHRATPVQVQGLTGVIA--IAAG 1185

Query: 420  FNHTGAL 426
              HT AL
Sbjct: 1186 SLHTVAL 1192



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 99/372 (26%), Positives = 156/372 (41%), Gaps = 40/372 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G++  R  P      E   + A+A     T+ + + G V+A G N  GQ
Sbjct: 445 WGDNKRSQLGEGAVSQRHTPGEVQGLE--GITAIAASNLLTVAVRQDGTVWAWGDNARGQ 502

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   V  ++   +H  A+  DG ++ WG    GQLG G    
Sbjct: 503 LG-DGTTTRRLTPVQVQGLAG-VTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMD 560

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V+ L+G+     A G   +VA+   G V +WG    G+LG G  +  L    
Sbjct: 561 RSTPV--QVQGLTGV--TAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHL---- 612

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                TP  +  + G  V IAA G  H+  + ++G V+ +G     ++      H   P 
Sbjct: 613 -----TPVQVPGVTGA-VAIAAGGS-HTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPV 665

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +     HT  +   G ++TWG N +G LG G+     +P +V G      
Sbjct: 666 QVQGLADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHG------ 719

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                T    +      T A+ + + L W WG +H           GQLG G     + P
Sbjct: 720 ----LTDATAILTSSSQTVAMRQDRTL-WAWGDNH----------WGQLGDGTTTRRLTP 764

Query: 403 TIVNFGENVKAL 414
             V    +V A+
Sbjct: 765 VQVQGLMDVTAM 776



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            A  WG   +G+LG G+   R  PV         + ALA G AHT+ + E G V+A G N 
Sbjct: 1248 AWTWGFNLWGQLGDGTFTDRATPVQVQGLT--GVSALAAGYAHTVVVGEDGTVWAWGNNS 1305

Query: 100  FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
              QLG   +   S  P+++  L      ++ G  H+ A++ DG  + WG+N+ GQ+G G 
Sbjct: 1306 GTQLGNGSSTDRS-TPVQVEALTG-AFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGT 1363

Query: 160  KAAKVIPIPTKVE 172
             A +  P+   V+
Sbjct: 1364 TADRPTPVNVMVQ 1376



 Score = 46.2 bits (108), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 27/131 (20%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G HT  +   G ++ WG+N++G LG G+     SP             Q+ T    ++ G
Sbjct: 82  GNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPV------------QVMTGATAIAAG 129

Query: 357 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             HT A S+ G + TW            G +S GQLG G  +    P  V     V A  
Sbjct: 130 IYHTVAASQDGTVWTW------------GRNSSGQLGDGTSIQRFSPVQVQGLTGVTA-- 175

Query: 416 VSCGFNHTGAL 426
           V+ G NH+ AL
Sbjct: 176 VAAGRNHSAAL 186


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG GS   R  PV     +   + A+A G  H+L L   G V+A G ND+GQ
Sbjct: 197 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 254

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + +S  P+ + GL  +VV ++ G  HS A+  DG ++ WG N  GQLG      
Sbjct: 255 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 312

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P   +VE L  +     A GF  S+AV  GG + SWG   SG+LG+G  SS      
Sbjct: 313 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 362

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L    V   AAG +HS  +  +G V+ +G     ++  +       P 
Sbjct: 363 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            +  L     V  G YH+  + +GG L+ WG N+ G LG     ++  P
Sbjct: 418 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 466



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 165/371 (44%), Gaps = 50/371 (13%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S+ R     A ++  ++A+A G  ++L L   G V+A G N  GQLG       S  P  
Sbjct: 110 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 168

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           + GL + V  ++ G  H+ A+  DG ++ WG N  GQLG G  A +  P+  +V  L G+
Sbjct: 169 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 225

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
                A G+  S+A+   G V +WG    G+LG+G          +    TP  +  L  
Sbjct: 226 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 274

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           V V +AA GF HS  +  +G V+ +G+    ++         +P  +  L     V  G 
Sbjct: 275 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 332

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
           YH+  + +GG L++WG+N +G LG GS      P  VQG            ++  V+ G 
Sbjct: 333 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG----------LGAVTSVAAGG 382

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ- 415
            H+ A+ ++G +  W            G +  GQLGH    +   P        V  LQ 
Sbjct: 383 MHSVAVQADGTVWAW------------GRNEEGQLGHERAPERATPV------RVPGLQG 424

Query: 416 ---VSCGFNHT 423
              V+ GF H+
Sbjct: 425 EVAVAAGFYHS 435


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 139/287 (48%), Gaps = 17/287 (5%)

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EV 125
           A +  ++ A++CG AHTL L + G VYA GL+  GQLG+         P  I  L   ++
Sbjct: 29  ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQI 88

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           VQ+S GY+HS A++   E++ WG+N  GQLGLG +  K    P  ++ L GI   Q A G
Sbjct: 89  VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTS-PQLIKSLLGIPFMQIAAG 147

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S  +T  G +  WG    G+LG   E+           Y P L+K L   K+     
Sbjct: 148 GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---------DRYVPNLLKSLRSQKIVYICC 198

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CV 302
           G  H+A + + G V+ FG     ++     +H   P  + +L  S   +V CG  HT   
Sbjct: 199 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAF 258

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG---PFSESPVDQI 346
           + S G +Y++G   NG LG GS     SP  V+G   P+SE     I
Sbjct: 259 VPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQDPSNI 305



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G ++  G N FG
Sbjct: 110 WGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 169

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++     +  L  S   +++V I  G  H++A+T +G ++ +G    GQLG    +
Sbjct: 170 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 229

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            ++   P KV  L G    Q A G + + A V   G++ S+G GG+G+LG G  S+
Sbjct: 230 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 283



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 36/249 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G   ++A+   G+V +WG    G+LG  G E  I           PR IK L  +++   
Sbjct: 41  GDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECI---------RVPRNIKSLSDIQIVQV 91

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G+ HS  + +   V+ +G     ++ L  E      P LI  L   P+ + +  GG H
Sbjct: 92  SCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQ-IAAGGAH 150

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           + VLT  G ++ WG N+ G LG+   +  + P  ++   S+         IV + CG  H
Sbjct: 151 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ--------KIVYICCGEDH 202

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           TAA++ EG + T+G GG             GQLGH +    I+P  V         QV+C
Sbjct: 203 TAALTKEGGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVAC 250

Query: 419 GFNHTGALL 427
           G  HT A +
Sbjct: 251 GRQHTSAFV 259


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 184/412 (44%), Gaps = 41/412 (9%)

Query: 26  ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           +C  W +ST ++    +WG  D  +LG         P +C        K +A G   T F
Sbjct: 546 LCTLWENSTNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFF 605

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDG 142
           +T  G +Y+ G + FG+LGI +  G    P  ++GL + +   V + +G +H  A+T DG
Sbjct: 606 ITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
             + WG   NGQLG G   +     P  +E   G      + G   S A+     + +WG
Sbjct: 666 LAFSWGDGENGQLGHGNLMS--CSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWG 723

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVY 260
            G  GRLGHG E +IL          P+ +    G  V   + G     + CI ++ +V+
Sbjct: 724 LGDFGRLGHGDEETIL---------QPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVW 774

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +GD    K+          P  + +L   +  +++CG   T  LT  G ++TWG  +  
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFY 834

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
            LG G+   +  P+ V+G   +  +D        ++ G  H  A++ +G++ +WG     
Sbjct: 835 RLGHGTDIHVRQPKLVEGLRGKHVID--------IAVGALHCLAVTQDGEVFSWG----- 881

Query: 378 GTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               ++ H   GQLG G  DV  + P ++    N +   V+CG +H+ A  E
Sbjct: 882 ----DNDH---GQLGTGETDVKKV-PNLITGLHNHRIKYVACGSSHSIAWTE 925



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 153/331 (46%), Gaps = 27/331 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G+ G+LGLG  E+   P +  + +  ++K ++   GG H L L+  G V++ G  + G
Sbjct: 1500 GYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDG 1559

Query: 102  QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N   S +P RI     K +  I  G  HS+AI ++GELY WGK   G+LG G  
Sbjct: 1560 KLG-HGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDS 1618

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P   +VE L   F    A G    Q++ +T    V SWG G  G+LG G      
Sbjct: 1619 DDQLKP--KQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGG----- 1671

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P +I++L G  +     G   S  + + G +Y +G     ++      H 
Sbjct: 1672 ----SDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHV 1727

Query: 279  RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RRP +++ L       + CG  H  V T  GE+Y WG N+ G LG G+I    +P  +  
Sbjct: 1728 RRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTP-TLNT 1786

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
                  +D+I       SCG  HT A S  K
Sbjct: 1787 FLLNKKIDRI-------SCGSAHTIAWSTSK 1810



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 157/352 (44%), Gaps = 50/352 (14%)

Query: 87   TETGCVYATGLNDFGQLGISENIGYS--------LEPLRISGLKKEVVQISTGYHHSSAI 138
            T+   V+ATG  + GQLG+    GYS        LE ++   +KK  + + +G  H  A+
Sbjct: 1491 TDGALVFATGYGNNGQLGL----GYSETVTSPRLLESIKHINIKK--ISVHSGGRHCLAL 1544

Query: 139  TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
            + DGE++ WG+  +G+LG G +       P ++E   G        G   S A+   G++
Sbjct: 1545 SSDGEVFSWGEGEDGKLGHGNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGEL 1602

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDEN 256
             +WG G  GRLGHG          S  +  P+ ++ L+   V   A  +G   + CI  +
Sbjct: 1603 YTWGKGRYGRLGHGD---------SDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITND 1653

Query: 257  GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
              V+ +GD    K+     +  + P +I  L      +V CG   +  LT  G LYTWG 
Sbjct: 1654 DNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGK 1713

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH-TAAISEGKILTWGW 373
             +   LG G+ + +  P  V   F     ++I TSI   SCG  H      EG++  WG 
Sbjct: 1714 GDYYRLGHGTEEHVRRPMMVTALF-----NKIVTSI---SCGSLHCVVCTDEGEVYCWG- 1764

Query: 374  GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                        +  GQLG G  +    PT+  F  N K  ++SCG  HT A
Sbjct: 1765 -----------DNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 6/127 (4%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G  +    P++        +  + CG   ++ LT+ G +Y  G  D+ +
Sbjct: 1659 WGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYR 1718

Query: 103  L--GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            L  G  E++     P+ ++ L  K V  IS G  H    T +GE+Y WG N  GQLG G 
Sbjct: 1719 LGHGTEEHVR---RPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGT 1775

Query: 160  KAAKVIP 166
              A+  P
Sbjct: 1776 IIARQTP 1782



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 50/95 (52%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG G+ E   RP++ +A     + +++CG  H +  T+ G VY  G ND GQ
Sbjct: 1711 WGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQ 1770

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            LG    I      L    L K++ +IS G  H+ A
Sbjct: 1771 LGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 100/248 (40%), Gaps = 44/248 (17%)

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
            T G  V + G G +G+LG G   ++          +PRL++ ++ + +K  +  +G  H 
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVT---------SPRLLESIKHINIKKISVHSGGRHC 1541

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG---------GYHTC 301
              +  +G V+ +G+    K+      H  R +  S  P   E  CG         G H+ 
Sbjct: 1542 LALSSDGEVFSWGEGEDGKL-----GHGNRQT--SSQPKRIEFFCGKIITNICAGGSHSA 1594

Query: 302  VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
             +   GELYTWG    G LG G  D    P++V+       +D  C S      G   T 
Sbjct: 1595 AIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGS------GDAQTL 1648

Query: 362  AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
             I+    + W WG        DG    G+LG G       P I+        ++V CG  
Sbjct: 1649 CITNDDNV-WSWG--------DG--DYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQ 1697

Query: 422  HTGALLEY 429
             + AL +Y
Sbjct: 1698 FSMALTKY 1705



 Score = 41.2 bits (95), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 19/145 (13%)

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            LI  L     V       C+ T G  ++  G   NG LG+G  + + SP  ++       
Sbjct: 1470 LIDNLLKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLES------ 1523

Query: 343  VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
            +  I    + V  G +H  A+ S+G++ +WG G       ED     G+LGHGN      
Sbjct: 1524 IKHINIKKISVHSGGRHCLALSSDGEVFSWGEG-------ED-----GKLGHGNRQTSSQ 1571

Query: 402  PTIVNFGENVKALQVSCGFNHTGAL 426
            P  + F        +  G +H+ A+
Sbjct: 1572 PKRIEFFCGKIITNICAGGSHSAAI 1596


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 169/340 (49%), Gaps = 39/340 (11%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
           S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  L  + ++ ++ 
Sbjct: 36  SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGALADQHIIHVAC 92

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  HS A++  G+L+ WG  S+GQLG        + IP  ++ L+     Q + G    +
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+   G+  +WG    G+LG G+E          S+ +P+ +K LEG+ +   AAG  HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFP--------SQASPQRVKSLEGIPLAQVAAGGAHS 203

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
             +  +G V+ +G     ++   +    + P  + KL  +++VV   CG  HT VLT  G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SE 365
            ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG +HT A   S 
Sbjct: 263 GVFTFGAGSFGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACGRQHTLAFVPSS 314

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           G I  +G G              GQLG G+  +   P+ V
Sbjct: 315 GLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 342



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG +        P  I  
Sbjct: 75  KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134

Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++++ Q+S G  H  A+  DG+ + WG+N +GQLGLGK+       P +V+ L GI  
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E         T   +P  +K L   K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 40/331 (12%)

Query: 104 GISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG  ++ 
Sbjct: 14  GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREG 73

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K    P ++  L+       A G   S+A++  G++ SWGAG  G+LGH          
Sbjct: 74  NK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTED----- 124

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
              S   PRLIK+L    +   + G  H   +  +G+ + +G     ++     F     
Sbjct: 125 ---SVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS 181

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP  V+  
Sbjct: 182 PQRVKSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLL 240

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            ++         +V +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 241 RTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SFGQLGHDSM 280

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            D ++P  V      +  Q++CG  HT A +
Sbjct: 281 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 311



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 37/286 (12%)

Query: 147 WGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           WG  S G  G +      ++  P     +S    K+ A G   S+ +   G+V + G   
Sbjct: 4   WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNT 63

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  
Sbjct: 64  KGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAG 112

Query: 266 AVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           +  ++      +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+
Sbjct: 113 SDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGL 172

Query: 323 G-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTF 380
           G       SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG        
Sbjct: 173 GKEFPSQASPQRVKS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWG-------- 216

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----RNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVL 258



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL     R  P          +  ++CG  HT  LT++G V+  G   FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 334 CNVKCPSPVK 343


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 175/388 (45%), Gaps = 43/388 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVY---ATGLND 99
           G G   +LG+G LE    PV         S    A G      LT    +Y   ++G+  
Sbjct: 59  GTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYA 118

Query: 100 FGQLGISENIGYSL--EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
              +   + I Y    EP +  G    +V+I TG  H  A++ +GE+Y+WG +  GQ GL
Sbjct: 119 LLPMRRDKRIYYPTLCEPAQSLG----IVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGL 174

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G K A+ +PI  ++E          + G + S AV+  G+V +WG G  G+LGH      
Sbjct: 175 GNKEAQHLPI--RMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNG---- 228

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGN 276
                +  E  P+ +  + G  +     G   +  ++E  GR++ FG+    ++   E  
Sbjct: 229 -----TEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERG 283

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               PS++  L   +EV  GG H   LT  G+ ++WG  E+G LG G+ +    PE +  
Sbjct: 284 LCLEPSVVP-LDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPI-- 340

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                P       +V VS G  H+ A++E G++  WG+  S            G+LG GN
Sbjct: 341 -----PTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNAS------------GRLGLGN 383

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHT 423
           +   + PT++    + + L+  CG +H+
Sbjct: 384 ESSVMTPTLIKALADKRVLRAICGLDHS 411



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 20/268 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WGN ++G+ GLG+ E++  P+    F   S+  ++CG  H+  +++ G V+  G    G
Sbjct: 163 IWGNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDG 222

Query: 102 QLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGK 159
           QLG        L+P  ++ ++ E + +++ G   +  +   +G L+ +G    GQLG G+
Sbjct: 223 QLG-HNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGE 281

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +   + P    ++ +     K+ A G    +A+T  G+  SWG G  GRLGHG     L 
Sbjct: 282 RGLCLEPSVVPLDNV-----KEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFL- 335

Query: 220 FLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                    P  I  L   V V   +AG  HS  + E+G+VY +G  A  ++     +  
Sbjct: 336 --------KPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSV 387

Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLT 304
             P+LI  L        +CG  H+  +T
Sbjct: 388 MTPTLIKALADKRVLRAICGLDHSLFIT 415



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 102/216 (47%), Gaps = 18/216 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G  G+LG    E   +P   +      +  + CG   T  L ET G ++  G  + G
Sbjct: 216 WGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAG 275

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--K 159
           QLG  E  G  LEP  +      V +++ G  H  A+T DG+ + WG   +G+LG G  +
Sbjct: 276 QLGHGER-GLCLEPSVVP--LDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATE 332

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              K  PIPT    + G+ +  A  G   S+A+T  G+V  WG   SGRLG G ESS++ 
Sbjct: 333 DFLKPEPIPTLGPAV-GVVSVSAGGG--HSLALTESGQVYGWGFNASGRLGLGNESSVM- 388

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
                   TP LIK L   +V  A  G  HS  I +
Sbjct: 389 --------TPTLIKALADKRVLRAICGLDHSLFITQ 416



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 29/207 (14%)

Query: 229 PRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQEGNHARRPSLISK 286
           P  ++EL  G     AAAG+  +  +     +Y +G   V  +L  +       P+L   
Sbjct: 77  PVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYALLPMRRDKRIYYPTLCE- 135

Query: 287 LPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            P       ++  G  H   L+  GE+Y WG++E G  G+G+ +  H P R++  F +  
Sbjct: 136 -PAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPIRMEF-FRDK- 192

Query: 343 VDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                 SIV VSCG  H+AA+S +G++ TWG+G              GQLGH    D + 
Sbjct: 193 ------SIVDVSCGLDHSAAVSKDGRVWTWGYG------------IDGQLGHNGTEDELK 234

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLE 428
           P  +         +V+CG + TG L E
Sbjct: 235 PKELTVIRGEGISRVTCGTDFTGLLNE 261



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 36/287 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y  G   N QLG+G      +P+P + E   G     AA G+ Q+  +T   ++  WG+
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQ-ELPVGASYIDAAAGWTQNFLLTTRHELYYWGS 113

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G          ++L   R    Y P L +  + + +     G  H   + +NG VYI+G
Sbjct: 114 SGV--------YALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWG 165

Query: 264 DRAVDKMLF--QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +    +     +E  H        +     +V CG  H+  ++  G ++TWG   +G LG
Sbjct: 166 NSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLG 225

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGT 379
               +    P+ +     E         I  V+CG   T  +  +EG++ T+G G     
Sbjct: 226 HNGTEDELKPKELTVIRGE--------GISRVTCGTDFTGLLNETEGRLFTFGNG----- 272

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    GQLGHG     + P++V   +NVK  +V+ G  H  AL
Sbjct: 273 -------EAGQLGHGERGLCLEPSVVPL-DNVK--EVAAGGAHMLAL 309


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 10/277 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        RP +  A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 46  GDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E       P +I  L   +++Q+S G++HS A++ DG++Y WGKNS GQLGLGK+  
Sbjct: 106 GIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFP 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 166 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQL------ALSGNNT 218

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + +NG+V+ FGD +  ++ +      R P 
Sbjct: 219 PVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQ 278

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNEN 317
            +  +     ++ CG YHT   + + GE+ ++G   N
Sbjct: 279 QVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRN 315



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 29/311 (9%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTG 131
           ++  ACG  H+L L   G V++ G N  GQLG          P  I  L+  +V  +S G
Sbjct: 23  VRQAACGERHSLLLLSDGTVHSCGDNTQGQLG-RRGKPREERPGLIKALETLLVGLVSCG 81

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+ +   K+   P K++ L+GI   Q + G   S+A
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIF-TPKKIKTLTGIKIIQVSCGHYHSLA 140

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS 
Sbjct: 141 LSEDGQVYSWGKNSQGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSF 192

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV---CGGYHTCVLTS 305
            +  +G  + +G     ++     N      +P  I  L  S +V+   CG  HT VLT 
Sbjct: 193 ALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALK-SLDVIYISCGYEHTAVLTQ 251

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--I 363
            G+++T+G N  G LG         P++V+G      +D + + I    CG  HT A   
Sbjct: 252 NGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG------IDGLVSQI---DCGSYHTLAYVY 302

Query: 364 SEGKILTWGWG 374
           + G+++++G G
Sbjct: 303 TTGEVVSFGRG 313



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 115/260 (44%), Gaps = 35/260 (13%)

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
           G   +QAA G   S+ +   G V S G    G+LG   +           E  P LIK L
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPR---------EERPGLIKAL 70

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLPYSE--E 292
           E + V + + G  HS  +   GRV+ +G  +  ++  +E       P  I  L   +  +
Sbjct: 71  ETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQ 130

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIV 351
           V CG YH+  L+  G++Y+WG N  G LG+G       SP+RV+      P+ Q      
Sbjct: 131 VSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRS-LEGIPLAQ------ 183

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFG 408
            V+ G  H+ A+S     ++GWG ++           GQL   G+   V    P  +   
Sbjct: 184 -VAAGGAHSFALSLSGT-SFGWGSNN----------TGQLALSGNNTPVQRYKPHSIGAL 231

Query: 409 ENVKALQVSCGFNHTGALLE 428
           +++  + +SCG+ HT  L +
Sbjct: 232 KSLDVIYISCGYEHTAVLTQ 251


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 148/330 (44%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG G ++S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3952 GYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    I Y    L  + L  E+V I+ G HHS+AI+  G LY WGK   G+LG G   
Sbjct: 4012 KLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSD 4071

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   PT V  L G      A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4072 DQL--KPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4123

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4124 ---SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4180

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  +S L   +   +  G  H    +  GE+YTWG N+ G LG G+     SP  V   
Sbjct: 4181 RPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHAL 4240

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +        +I  V+CG  HT A S  K
Sbjct: 4241 QGK--------NITRVACGSAHTLAWSTTK 4262



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 165/361 (45%), Gaps = 60/361 (16%)

Query: 86   LTETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
            + +   VY  GLND  QLG          +   +   L+P+ I+G  K +  +S      
Sbjct: 2918 VQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQ----- 2972

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT 193
                 +G+LY  G+ +NG+LGLG       P P  +  LS    K+ A+  G + ++A+T
Sbjct: 2973 -----EGKLYACGEGTNGRLGLGDNNNVGEPKP--IPFLSQYIIKKVAVHSGGKHALALT 3025

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              GKV SWG G  G+LGHG   S+           PRLI+ L+  +++  A G  HSA I
Sbjct: 3026 QDGKVFSWGEGEDGKLGHGNRVSL---------DKPRLIEALKSKRIRDIACGSGHSAAI 3076

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGEL 309
              NG +Y +G     ++   +     +P L+  L      +V CG     T  LT  G +
Sbjct: 3077 ASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSV 3136

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GK 367
            Y+WG  + G LG G  D         G +S  PVD++    +V V CG + + A+++ G+
Sbjct: 3137 YSWGDGDFGKLGRGGSD---------GCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGE 3187

Query: 368  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            + TWG G               +LGHGND     PT+V      K + V+ G  H  A+ 
Sbjct: 3188 VWTWGKGDYF------------RLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVT 3235

Query: 428  E 428
            +
Sbjct: 3236 D 3236



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 150/326 (46%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2980 GEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3039

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    +    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 3040 KLGHGNRVSLD-KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3098

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +   P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3099 TTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG----- 3151

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   Y+P  +  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3152 ----SDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3207

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RRP+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3208 RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHN 3267

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       V+CG  H+ A
Sbjct: 3268 -LEDAKVNR-------VACGSSHSIA 3285



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 197/406 (48%), Gaps = 47/406 (11%)

Query: 32   SSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-T 87
            +S +Q+  A  +WG  D  +LG G   S+ + PV      K  LK +   GG+ TLF+ +
Sbjct: 2915 ASDVQQNAAVYVWGLNDKDQLG-GLKGSKIKLPVHSEVLSK--LKPIHIAGGSKTLFVVS 2971

Query: 88   ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGEL 144
            + G +YA G    G+LG+ +N     EP  I  L + +++   + +G  H+ A+T DG++
Sbjct: 2972 QEGKLYACGEGTNGRLGLGDNNNVG-EPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKV 3030

Query: 145  YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
            + WG+  +G+LG G + +  +  P  +E L     +  A G   S A+   G++ +WG G
Sbjct: 3031 FSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLG 3088

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIF 262
              GRLGHG          +T+   P+L+  L G +V   A G     +  + E+G VY +
Sbjct: 3089 EYGRLGHGD---------TTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSW 3139

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
            GD    K+     +    P  + +L      +V CG   +  LT  GE++TWG  +   L
Sbjct: 3140 GDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3199

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
            G G+   +  P  V+G   +         +V V+ G  H  A+++ G++  WG       
Sbjct: 3200 GHGNDHHVRRPTLVEGLRGKK--------VVHVAVGALHCLAVTDAGQVYAWG------- 3244

Query: 380  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
              ++ H   GQ G+G+ +    P++V+  E+ K  +V+CG +H+ A
Sbjct: 3245 --DNDH---GQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIA 3285



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 174/396 (43%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P+ C +        LA GG  TLF +T  G VYATG    G
Sbjct: 3899 WGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLA-GGEQTLFAVTADGKVYATGYGALG 3957

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG     S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3958 RLGTGGVDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G +       P  +E L G      A G   S A++  G + +WG G  GRLGHG     
Sbjct: 4016 GNRI--TYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD---- 4069

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P ++  L+G KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4070 -----SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4124

Query: 276  NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4125 DGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4184

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             IV ++ G  H  A S+ G++ TW            G +  G
Sbjct: 4185 VSALQG-----------KKIVSIATGSLHCVACSDKGEVYTW------------GDNDEG 4221

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V+  +     +V+CG  HT A
Sbjct: 4222 QLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 154/349 (44%), Gaps = 47/349 (13%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           + T Q   A  WGN  +G    GS+     P  C A  +  +K L C     L L+ +G 
Sbjct: 429 TQTFQEVLA--WGNVHFGS---GSM-----PFYCDAIAEIGVKQLCCTERALLILSLSGK 478

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGK 149
           VY        Q            P  + G   +VVQI++     H  A+T  G +Y WG 
Sbjct: 479 VYMMYYGSETQY-----------PQSVYGFADDVVQIASHPDGKHYLALTTKGIVYSWGN 527

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
              G+LG G   +     P  +E LS       A G   S A++  G++L+WG G  GRL
Sbjct: 528 GDGGRLGHGDSFS--CDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRL 585

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAV 267
           GHG    I           P ++  L G  V   A  +G   + C+  +G V+ +GD   
Sbjct: 586 GHGICDDI---------SIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDY 636

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            K+     + ++ P ++ KL      +V CGG  +  LT+ GE+YTWG  ++  LG G+ 
Sbjct: 637 GKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNE 696

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
           + +  P+ V+G  ++   D        +S G  H  AI+E + L +GWG
Sbjct: 697 EHVRFPKLVEGLRNKKVRD--------LSVGNLHILAITEDQ-LVYGWG 736



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 157/345 (45%), Gaps = 40/345 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G +Y  G N  GQLG  E     L PL    L     +Q++ G     A+T DG++Y  
Sbjct: 3893 SGAIYGWGHNHRGQLGGLEGAKVKL-PLPCESLSALRPIQLAGGEQTLFAVTADGKVYAT 3951

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G  + G+LG G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G 
Sbjct: 3952 GYGALGRLGTG--GVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4009

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG         R T +  P+LI+ L G ++   A G  HSA I   G +Y +G  
Sbjct: 4010 DGKLGHGN--------RITYDR-PKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKG 4060

Query: 266  AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
               ++   + +   +P++++ L   +  +V CG     T  +T    +++WG  + G LG
Sbjct: 4061 RYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4120

Query: 322  IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTF 380
             G  D    P +++              +V V CG + + A++  G + TWG G  H   
Sbjct: 4121 RGGSDGCKVPMKIESLAG--------LGVVKVECGSQFSVALTRSGAVYTWGKGDYH--- 4169

Query: 381  SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                     +LGHG D     P  V+  +  K + ++ G  H  A
Sbjct: 4170 ---------RLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVA 4205



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 110/244 (45%), Gaps = 21/244 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
           G H L LT  G VY+ G  D G+LG  ++     EP  I  L  + V  I+ G  +S+AI
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD-EPQVIEVLSDRTVTYIACGSTYSAAI 568

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
           +  GEL  WG+ S G+LG G      I IPT V  L+G      A G    Q++ VT  G
Sbjct: 569 SSTGELLTWGRGSYGRLGHG--ICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSG 626

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V SWG G  G+LG G          S     P+++ +L    V     G   SA +  +
Sbjct: 627 IVFSWGDGDYGKLGRGG---------SDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677

Query: 257 GRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
           G VY +G    D      GN  H R P L+  L   +  ++  G  H   +T    +Y W
Sbjct: 678 GEVYTWGKG--DHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGW 735

Query: 313 GSNE 316
           G N+
Sbjct: 736 GRND 739



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          S S   P++I+ L    V   A G  +
Sbjct: 514 LALTTKGIVYSWGNGDGGRLGHGD---------SFSCDEPQVIEVLSDRTVTYIACGSTY 564

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA I   G +  +G  +  ++     +    P++++ L       V CG     T  +T+
Sbjct: 565 SAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTN 624

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G +++WG  + G LG G  D    P+ V     +  +DQ   ++V V CG + +AA++ 
Sbjct: 625 SGIVFSWGDGDYGKLGRGGSDGSKLPKIV-----DKLLDQ---NVVKVFCGGQFSAALTA 676

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G  +            +LGHGN+     P +V    N K   +S G  H  
Sbjct: 677 HGEVYTWGKGDHY------------RLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHIL 724

Query: 425 ALLE 428
           A+ E
Sbjct: 725 AITE 728



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 121/315 (38%), Gaps = 96/315 (30%)

Query: 124  EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            EVVQ       +S +  +  +Y+WG N   QLG G K +K I +P   E LS +      
Sbjct: 2904 EVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG-GLKGSK-IKLPVHSEVLSKL------ 2955

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
                + + + GG K L                                            
Sbjct: 2956 ----KPIHIAGGSKTL-------------------------------------------- 2967

Query: 244  AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC-------G 296
                     + + G++Y  G+    ++   + N+   P  I   P+  + +        G
Sbjct: 2968 -------FVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPI---PFLSQYIIKKVAVHSG 3017

Query: 297  GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
            G H   LT  G++++WG  E+G LG G+   L  P  ++   S+   D        ++CG
Sbjct: 3018 GKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRD--------IACG 3069

Query: 357  WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
              H+AAI S G++ TWG G              G+LGHG+   ++ P +V+     + +Q
Sbjct: 3070 SGHSAAIASNGELYTWGLG------------EYGRLGHGDTTTHLKPKLVDALVGQRVIQ 3117

Query: 416  VSCGFN--HTGALLE 428
            V+CG     T AL E
Sbjct: 3118 VACGSRDAQTMALTE 3132



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  D  +
Sbjct: 631 WGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690

Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    E++ +   P  + GL+ K+V  +S G  H  AIT D  +Y WG+N   Q+    
Sbjct: 691 LGHGNEEHVRF---PKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSL 747

Query: 160 KAAKVIPIPTKVECLSG 176
            A  V+  PT    LSG
Sbjct: 748 GA--VVSEPTLCPTLSG 762



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
            WG+ D G+LG G+  ++  P +  A +  ++  +ACG AHTL  + T   ++
Sbjct: 4215 WGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHS 4266


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 162/390 (41%), Gaps = 38/390 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G LG G+      P+        ++ A+A G  H+L +T  G   A G N FGQ
Sbjct: 77  WGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQ 136

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       S  P+ +       V  I+ G  HS A+T  G    WG N  G+LG G   
Sbjct: 137 LGDGSTTDSS-TPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTT 195

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V+  +G      A G   S+A+T  G VL+WG    G+LG G         
Sbjct: 196 RRDTPV--DVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGT-------- 245

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T   TP  +    G  V   AAG LHS  +   G +  +G+ +  ++      ++  P
Sbjct: 246 -TTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTP 304

Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             +  LP S  +     G  H+  +TS G    WG N++G LG G+     +P  V  P 
Sbjct: 305 IAV-NLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPA 363

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                     ++   + G  H+ A+ + G IL W            G++S G+LG G   
Sbjct: 364 DT--------TVTATTAGSLHSLAVTTAGTILAW------------GNNSDGRLGDGTTT 403

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +   P  VN   +      + G  H+ AL+
Sbjct: 404 NSSTPIAVNLPADTTVTATTAGSAHSMALV 433



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 103/273 (37%), Gaps = 42/273 (15%)

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-----VLSWGAGGSGRLGHGQE 214
           +A +V+   T   CL+   T    L    +VA  G  +     VL+WG    G LG G  
Sbjct: 34  RAGRVV---TGAFCLALAVTLAQTLSVSPTVAQNGPSRDASDTVLAWGDNKDGELGDGT- 89

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   +T   TP  +    G  +   AAG  HS  +   G    +G+    ++    
Sbjct: 90  --------TTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGS 141

Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +  P  +  LP    V     G  H+  +TS G    WG N+ G LG G+     +P
Sbjct: 142 TTDSSTPIAV-DLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTP 200

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
             V  P          T++  ++ G  H+ A+ S G +LTWG             +S GQ
Sbjct: 201 VDVDLPAG--------TTVTAIAAGIGHSLALTSAGTVLTWGL------------NSDGQ 240

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           LG G   D   P  V+         ++ G  H+
Sbjct: 241 LGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHS 273


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 173/393 (44%), Gaps = 42/393 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-TGLNDFG 101
           WG G  G LG G  +    P V  A   H +K L  G  HT+ L  +G VY+        
Sbjct: 164 WGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGR 223

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
                E   ++  PLR++GL+  ++  I+   +HS A+  +GE Y+WG+  +G LG+ G 
Sbjct: 224 LGQGRERDRFT--PLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGD 281

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K       PT++  L G     AA G   ++ V   G+V + G    G+LG G   ++  
Sbjct: 282 KHVS----PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAM-- 335

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P L+  L    V+I A G  H+  + E GR+Y +G  +  ++   E    R
Sbjct: 336 -------SEPTLVTNLPERIVRI-ACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDR 387

Query: 280 -RPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P  +      ++V    CGG HT +L++ G LY +GS   G LG+G +   +      
Sbjct: 388 LSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATPAA 447

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            P  E            +SCG   +AA+S+ GKI TWG G S+     DG +        
Sbjct: 448 LPNPEG------RKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGRTK------- 494

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                  PT++    + +   V+CGF H  A +
Sbjct: 495 -----YAPTLIESMADKRCRTVACGFFHMAATI 522



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 110/276 (39%), Gaps = 74/276 (26%)

Query: 198 VLSWGAGGSGRLGHGQES---------SILGF---------------------------- 220
           V +WG G  G LGHG+E          ++LG                             
Sbjct: 161 VYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGL 220

Query: 221 ------LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  R    +TP  +  L G  +   A    HS  + +NG  Y++G R +D  L  E
Sbjct: 221 GGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWG-RGIDGSLGVE 279

Query: 275 GNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           G+    P+ I  L     V   CG   T  +   GE+Y  G+NE+G LGIGS + +  P 
Sbjct: 280 GDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEP- 338

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
                   + V  +   IV ++CG  H  A+SE G++  WG            HSS GQL
Sbjct: 339 --------TLVTNLPERIVRIACGNSHAVALSETGRLYAWG-----------AHSS-GQL 378

Query: 392 GHGNDV-DYIHPTIVNFGENVKALQV---SCGFNHT 423
           G G  + D + P  V    NV    V   +CG NHT
Sbjct: 379 GVGEPLEDRLSP--VRVESNVVRDDVADFACGGNHT 412


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 188/407 (46%), Gaps = 65/407 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WGN   G+LG G    +++  P     F+   +  ++CGG H++ + ++  +Y+ G + +
Sbjct: 1056 WGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRY 1115

Query: 101  GQLG----ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            GQLG      +N+     P +I      ++V+ I+TGY H+  +   G+L+ +G N +GQ
Sbjct: 1116 GQLGHGVLTPQNL-----PKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQ 1170

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            LGLG    + +P+  +   + GI  ++    A G   S+     G + SWGA   G+LGH
Sbjct: 1171 LGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
            G   +I   LR      P+ I EL+G  +   + G  H+  I E   VY +G    + M 
Sbjct: 1231 G---NIEKSLR------PKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQG--EHMC 1279

Query: 272  FQEGNHARR--PSLISKLPYS--EEVVCGGYHTCVLTSG------GELYTWGSNENGCLG 321
               G++     P +I        E+VVCG YHT  +T+       G +Y  G  E+G LG
Sbjct: 1280 LGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLG 1339

Query: 322  IGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSCGWKHTAAIS-EGKILTWGWGG 375
             G          ++ PF + P   +  S     IV  S G + +A I+  G + TWG+G 
Sbjct: 1340 TGG--------DLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYG- 1390

Query: 376  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGF 420
                       + GQ+G+G   D   PT ++  +    L  Q S GF
Sbjct: 1391 -----------NFGQIGNGKTEDMWLPTKISLNDQRFMLFNQNSKGF 1426



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 58/324 (17%)

Query: 122  KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
            +K+ V ++ G+ H + I+ DGEL+ WG NS GQLG G    K    P +VE         
Sbjct: 1031 EKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIM 1090

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKV 240
             + G E SVAV    ++ SWG+   G+LGHG    +L     T +  P+ I++   G KV
Sbjct: 1091 ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHG----VL-----TPQNLPKKIEDFTGGQKV 1141

Query: 241  KIAAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQE---GNHARRPSLI 284
               A G+ H+  + ++G ++ FG             +RAV   +      G H  R + I
Sbjct: 1142 LAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAI 1201

Query: 285  SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +          G  H+ +    G++Y+WG+N  G LG G+I+    P++         +D
Sbjct: 1202 A---------AGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQ---------ID 1243

Query: 345  QIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
            ++    I+ +SCG  HT AISE   +  WG  G H             LG+G++ + + P
Sbjct: 1244 ELKGKPIIKISCGHFHTVAISELNSVYCWG-QGEHMC-----------LGNGSNKNELSP 1291

Query: 403  TIVNFGENVKALQVSCGFNHTGAL 426
             ++ F  N K  +V CG  HT  +
Sbjct: 1292 KMIEFFINKKIEKVVCGLYHTATV 1315



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 154/342 (45%), Gaps = 31/342 (9%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKE-VVQISTGY 132
            ++ACG  H   ++  G ++  G N  GQLG   N+G Y   P R+   K   ++ IS G 
Sbjct: 1036 SVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGG 1095

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVA 191
             HS A+    ++Y WG +  GQLG G    +   +P K+E  +G     A A G+  ++ 
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQ--NLPKKIEDFTGGQKVLAIATGYAHTMV 1153

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLR-STSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +   G + ++G   SG+LG G   +    +R  TSE     I  + G ++   AAG  HS
Sbjct: 1154 LKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSE-----IVGIHGERITAIAAGHSHS 1208

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
                +NG +Y +G  +  ++       + RP  I +L      ++ CG +HT  ++    
Sbjct: 1209 IMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNS 1268

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
            +Y WG  E+ CLG GS     SP+ ++          I   I  V CG  HTA ++  + 
Sbjct: 1269 VYCWGQGEHMCLGNGSNKNELSPKMIEF--------FINKKIEKVVCGLYHTATVTAAE- 1319

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDV-----DYIHPTIV 405
                 G   G     G    G+LG G D+     D  HP ++
Sbjct: 1320 ----NGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVI 1357



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 26/251 (10%)

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             A G+E    ++  G++ +WG    G+LGHG     +G  +ST    PR ++  +   + 
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLN---VGKYQST----PRRVETFKSSPII 1089

Query: 242  IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY- 298
            + + G  HS  +D++ ++Y +G     ++          P  I      ++V  +  GY 
Sbjct: 1090 MISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYA 1149

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            HT VL   G+L+T+G N++G LG+G+      P R++   +   V      I  ++ G  
Sbjct: 1150 HTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIE---TSEIVGIHGERITAIAAGHS 1206

Query: 359  HT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            H+   +  G I +WG             +S GQLGHGN    + P  ++  +    +++S
Sbjct: 1207 HSIMCLDNGDIYSWG------------ANSKGQLGHGNIEKSLRPKQIDELKGKPIIKIS 1254

Query: 418  CGFNHTGALLE 428
            CG  HT A+ E
Sbjct: 1255 CGHFHTVAISE 1265



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 26/151 (17%)

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGP 337
            P L+     +  V CG  H  V++S GEL+TWG+N  G LG G ++V     +P RV+  
Sbjct: 1025 PPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHG-LNVGKYQSTPRRVET- 1082

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            F  SP       I+++SCG +H+ A+ +  +I +W            G S  GQLGHG  
Sbjct: 1083 FKSSP-------IIMISCGGEHSVAVDQSFQIYSW------------GSSRYGQLGHGVL 1123

Query: 397  VDYIHP-TIVNFGENVKALQVSCGFNHTGAL 426
                 P  I +F    K L ++ G+ HT  L
Sbjct: 1124 TPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 49/348 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQIS 129
           +K++A G  HTLFL++ G V++ G N  G+LG   + E   Y++ P+ IS     ++QIS
Sbjct: 49  VKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREG-SYTIYPVHISS-TVSIIQIS 106

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIP--IPTKVECLSGIFTKQAALGF 186
            G  HS A++ DG L+ WG NS+GQL + G   A   P  +P+  E      T Q A G 
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE------TVQVACGA 160

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +V++ GGG+V  WG    GR+ H                +P  ++    + +   +AG
Sbjct: 161 SHTVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVEIFISIPIVQISAG 204

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            L +  +  +G ++ +G     ++          P  +  +     V CG  H+  LT  
Sbjct: 205 NLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINSVVAVECGDSHSIALTHE 264

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G +++ GS+  G LG G       P R Q        + + + +  ++CG  HT  ++ G
Sbjct: 265 GRVFSCGSDSFGQLGCG------QPNRSQNCM-RGITEMLGSHVTRIACGRCHTIVVANG 317

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           K+ T+G             +S GQLGHGN  + I P +++  ENV ++
Sbjct: 318 KMHTFGL------------NSNGQLGHGNTRNQITPRVIDSVENVASV 353



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 33/304 (10%)

Query: 45  NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
           NG+ GR G+        PV  S+    S+  ++ G +H++ +++ G ++A G N  GQL 
Sbjct: 76  NGELGRGGVREGSYTIYPVHISS--TVSIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLA 133

Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
           +S +I  S  P R+  L  E VQ++ G  H+ ++   G +++WG+ S+G++         
Sbjct: 134 MSGDILASDTPKRVPSL-PETVQVACGASHTVSLNGGGRVFIWGQQSDGRIRHS------ 186

Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
              P +VE    I   Q + G   ++A+T  G + +WG    G+LG      ++      
Sbjct: 187 ---PAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVN----- 238

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL- 283
               P  +  +  V       G  HS  +   GRV+  G  +  ++   + N ++     
Sbjct: 239 ----PCAVPNINSVVA--VECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRG 292

Query: 284 ISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI------DVLHSPERVQ 335
           I+++   +   + CG  HT V+ + G+++T+G N NG LG G+        V+ S E V 
Sbjct: 293 ITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVA 351

Query: 336 GPFS 339
             F+
Sbjct: 352 SVFA 355



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 49/295 (16%)

Query: 143 ELYMWGKNSNGQLGLGKKA----AKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTG 194
           +LY++G   +GQLG    +    A+++ +P  V       +G+  K  A G   ++ ++ 
Sbjct: 5   QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64

Query: 195 GGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
            GKV S G+  +G LG G  +E S          YT   +     V +   +AG  HS  
Sbjct: 65  DGKVWSCGSNYNGELGRGGVREGS----------YTIYPVHISSTVSIIQISAGRSHSMA 114

Query: 253 IDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
           + ++GR++ +G  +  ++    +   +  P  +  LP + +V CG  HT  L  GG ++ 
Sbjct: 115 VSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGRVFI 174

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTW 371
           WG   +G        + HSP  V          +I  SI +V         IS G + T 
Sbjct: 175 WGQQSDG-------RIRHSPAEV----------EIFISIPIVQ--------ISAGNLFTM 209

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               S GT    G +  GQLG   + D ++P  V    +V A  V CG +H+ AL
Sbjct: 210 ALTAS-GTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINSVVA--VECGDSHSIAL 261



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 18/153 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG  + +    P  C+    +S+ A+ CG +H++ LT  G V++ G + FGQ
Sbjct: 220 WGKNEEGQLGDFTNKDVVNP--CAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQ 277

Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG      S+N    +  +    L   V +I+ G  H + +  +G+++ +G NSNGQLG 
Sbjct: 278 LGCGQPNRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332

Query: 158 GKKAAKVIP-IPTKVECLSGIFTKQAALGFEQS 189
           G    ++ P +   VE ++ +F      G++QS
Sbjct: 333 GNTRNQITPRVIDSVENVASVFA-----GWDQS 360


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 168/340 (49%), Gaps = 39/340 (11%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
           S+K +ACGG H++FL E G VY  G N  GQLG  E  G   +P +I  L  + +V ++ 
Sbjct: 36  SIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLG-HEREGN--KPEQIGALADQHIVHVAC 92

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  HS A++  G+L+ WG  S+GQLG        + IP  ++ L+     Q + G    +
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+   G+  +WG    G+LG G+E          S+ +P+ +K LEG+ +   AAG  HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKE--------FPSQASPQRVKSLEGIPLAQVAAGGAHS 203

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
             +  +G V+ +G     ++   +    + P  + KL  +++VV   CG  HT VLT  G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SE 365
            ++T+G+   G LG  S++   +P RV        ++ + + +  ++CG +HT A   S 
Sbjct: 263 GVFTFGAGSFGQLGHDSMNDEVNPRRV--------LELMGSEVTQIACGRQHTLAFVPSS 314

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           G I  +G G              GQLG G+  +   P+ V
Sbjct: 315 GLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 342



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG +        P  I  
Sbjct: 75  KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134

Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++++ Q+S G  H  A+  DG+ + WG+N +GQLGLGK+       P +V+ L GI  
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E         T   +P  +K L   K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304

Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT   + S G +Y +G    G LG G    +  P  V+G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 40/331 (12%)

Query: 104 GISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG  ++ 
Sbjct: 14  GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREG 73

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K    P ++  L+       A G   S+A++  G++ SWGAG  G+LGH          
Sbjct: 74  NK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTED----- 124

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
              S   PRLIK+L    +   + G  H   +  +G+ + +G     ++     F     
Sbjct: 125 ---SVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS 181

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP  V+  
Sbjct: 182 PQRVKSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLL 240

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            ++         +V +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 241 RTQK--------VVYISCGEEHTAVLTKSGGVFTFGAG------------SFGQLGHDSM 280

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            D ++P  V      +  Q++CG  HT A +
Sbjct: 281 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 311



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 37/286 (12%)

Query: 147 WGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           WG  S G  G +      ++  P     +S    K+ A G   S+ +   G+V + G+  
Sbjct: 4   WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNT 63

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  
Sbjct: 64  KGQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAG 112

Query: 266 AVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           +  ++      +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+
Sbjct: 113 SDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGL 172

Query: 323 G-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTF 380
           G       SP+RV+      P+ Q       V+ G  H+ A+S  G +  WG        
Sbjct: 173 GKEFPSQASPQRVKS-LEGIPLAQ-------VAAGGAHSFALSLSGAVFGWG-------- 216

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 ----RNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVL 258



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL     R  P          +  ++CG  HT  LT++G V+  G   FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 334 CNVKCPSPVK 343


>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Takifugu rubripes]
          Length = 388

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 171/401 (42%), Gaps = 48/401 (11%)

Query: 48  YGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           YG+LG G +E R  P +C  +A +  +++ +  GG HT  +TE G V+  G N  GQLG+
Sbjct: 5   YGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHRGQLGL 64

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
                 S    R  GL + V  ++ G+  +  +T  G +   G N+ GQLG+G+K A   
Sbjct: 65  GHLTDISTLQ-RCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKPAYTA 123

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
            +   VE L       AA G   S+AVT  G V  WG G   +       S +      S
Sbjct: 124 DVQI-VESLKAAVVSVAA-GLRHSLAVTDSGCVYQWGIGLMSQAKRTLSPSPVP--SHLS 179

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
              P L+  L     ++ AAG +H  C+ ENG ++++G     ++L  E      P L S
Sbjct: 180 SVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQLLSSE------PFLSS 233

Query: 286 KLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGCLG-------IGSIDVLH 329
             P    ++          G  H    T  G ++TWG    G LG               
Sbjct: 234 PTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQSTT 293

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 389
             + V+ P  E P  Q  T I   +CG +H  AI  G++L+WGW            +  G
Sbjct: 294 EDQEVRLP-EEVPALQGATQI---TCGSEHNLAILGGRLLSWGW------------NEHG 337

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
             G G+  D   P +V     ++ L + CG  H+ A+   V
Sbjct: 338 MCGDGSHADVFQPQLV---PALRPLLIGCGAGHSMAVCAAV 375



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 142/345 (41%), Gaps = 53/345 (15%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G    G+LGLG L        C    + ++  + CG   TLFLT++G V + G N FGQL
Sbjct: 55  GQNHRGQLGLGHLTDISTLQRCLGLTQ-TVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQL 113

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           GI +   Y+ +   +  LK  VV ++ G  HS A+T  G +Y WG    G +   K+   
Sbjct: 114 GIGQKPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQWGI---GLMSQAKRTLS 170

Query: 164 VIPIPTK--------VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
             P+P+         V  L+   ++  A G    V +T  G +  WG+       H Q  
Sbjct: 171 PSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSN-----KHSQLL 225

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           S   FL S    TP     L G  V    +G+ H     E GRV+ +G     ++    G
Sbjct: 226 SSEPFLSSP---TPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQL----G 278

Query: 276 NHA-----------------RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            HA                 R P  +  L  + ++ CG  H   +  GG L +WG NE+G
Sbjct: 279 RHASTSQSSESQSTTEDQEVRLPEEVPALQGATQITCGSEHNLAIL-GGRLLSWGWNEHG 337

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             G GS   +  P+ V                +L+ CG  H+ A+
Sbjct: 338 MCGDGSHADVFQPQLVPA-----------LRPLLIGCGAGHSMAV 371



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 161/353 (45%), Gaps = 54/353 (15%)

Query: 98  NDFGQLGISENIGYSLEPL----RISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSN 152
           N +GQLG   + G    P+      + LK + V++ TG   H++ IT DGE+++ G+N  
Sbjct: 3   NSYGQLG---HGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHR 59

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           GQLGLG     +  I T   CL    T      G++ ++ +T  G+VLS G+   G+LG 
Sbjct: 60  GQLGLG----HLTDISTLQRCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGI 115

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------D 264
           GQ+ +    +        ++++ L+   V + AAG  HS  + ++G VY +G        
Sbjct: 116 GQKPAYTADV--------QIVESLKAAVVSV-AAGLRHSLAVTDSGCVYQWGIGLMSQAK 166

Query: 265 RAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           R +          +  PSL+  L    S  V  G  H   LT  G+L+ WGSN++  L +
Sbjct: 167 RTLSPSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQL-L 225

Query: 323 GSIDVLHSPERVQGPFSESPVDQIC---TSIVLVSCGWKHTAAISE-GKILTWGWGGSHG 378
            S   L SP         +PV++      +++ V  GW H  A +E G++ TWG  G++G
Sbjct: 226 SSEPFLSSP---------TPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWG-RGNYG 275

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL----QVSCGFNHTGALL 427
                  +S          D      V   E V AL    Q++CG  H  A+L
Sbjct: 276 QLGRHASTSQSSESQSTTEDQ----EVRLPEEVPALQGATQITCGSEHNLAIL 324


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 162/344 (47%), Gaps = 37/344 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  S ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 285 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 344

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG  +  +V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 345 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 403

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
            +  + I  P +VE L G+ T   + G   + AV         T  GK+ +WG G   RL
Sbjct: 404 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 461

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  +  L       A  G   +  +  +G ++  G  +V  
Sbjct: 462 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 511

Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EV CG YH  VLT  GE+YTWG   NG LG G I 
Sbjct: 512 QLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIA 571

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
              +P      F E+  D+   S+  ++CG   TAAI + K ++
Sbjct: 572 DRKTPT-----FVEALRDR---SVKRIACGSGFTAAICQHKSVS 607



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 171/376 (45%), Gaps = 60/376 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
           +ACG  H   +T    V+  G    G+LG     G S+ +P  +  L    V  I+ G  
Sbjct: 266 VACGVKHAALVTRQAEVFTWGEECSGRLG--HGAGTSIFQPRLVESLSICNVETIACGEF 323

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ AIT  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   + 
Sbjct: 324 HTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLEGLQVSAVSCGTWHTA 381

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  GK+ ++G G  G LGHG         R T  Y P+ ++ L+G++    + G  H+
Sbjct: 382 LITSSGKLYTFGDGTFGVLGHGN--------RETISY-PKEVESLKGLRTISVSCGVWHT 432

Query: 251 ACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEVV 294
           A + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  + V
Sbjct: 433 AAVVEVIMAQSNTSSGKLFTWGDG--DKYRLGHGDRSSKLKPTCVPSLID---YNFHKAV 487

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CG   T  LT+ G ++T GS+  G LG  + D  + P  V+              +V V+
Sbjct: 488 CGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRY-PRLVEEKLGGG-------GVVEVA 539

Query: 355 CGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  H A +++ G++ TWG G +            G+LGHG+  D   PT V    +   
Sbjct: 540 CGAYHVAVLTQSGEVYTWGKGAN------------GRLGHGDIADRKTPTFVEALRDRSV 587

Query: 414 LQVSCGFNHTGALLEY 429
            +++CG   T A+ ++
Sbjct: 588 KRIACGSGFTAAICQH 603



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 60/316 (18%)

Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG        +  +        AA  I +P  +E    +     A G + +  VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG  +SI         + PRL++ L    V+  A G  H+  I
Sbjct: 278 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 328

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S  P        V CG +HT ++TS G
Sbjct: 329 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 387

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI---- 363
           +LYT+G    G LG G+ + +  P+ V+       +  + T  + VSCG  HTAA+    
Sbjct: 388 KLYTFGDGTFGVLGHGNRETISYPKEVES------LKGLRT--ISVSCGVWHTAAVVEVI 439

Query: 364 ------SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV------NFGENV 411
                 S GK+ TWG G  +            +LGHG+    + PT V      NF + V
Sbjct: 440 MAQSNTSSGKLFTWGDGDKY------------RLGHGDRSSKLKPTCVPSLIDYNFHKAV 487

Query: 412 KALQVSCGFNHTGALL 427
               ++ G   +G + 
Sbjct: 488 CGHTLTIGLTTSGHIF 503



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 26/226 (11%)

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G +S+      +T    P+ ++    + V   A G  H+A +     V+ +G+    ++
Sbjct: 234 QGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 293

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G    +P L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +
Sbjct: 294 GHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGS-N 352

Query: 327 VLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 384
           V H  P+RV GP            +  VSCG  HTA I S GK+ T+G     GTF    
Sbjct: 353 VSHWIPKRVSGPLE-------GLQVSAVSCGTWHTALITSSGKLYTFG----DGTF---- 397

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
               G LGHGN     +P  V   + ++ + VSCG  HT A++E +
Sbjct: 398 ----GVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVI 439


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 157/305 (51%), Gaps = 29/305 (9%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           K++ACG  HT  +TE+G ++  G+ND+GQLGI E +  S  P  +  LK E V+ ++ G 
Sbjct: 39  KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDE-VKVSTRPCCVKKLKPEKVKVVACGR 97

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+   T  G LY +G N +GQLG+    +   P+  KVEC    + K  A G + SVA+
Sbjct: 98  IHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPV--KVECEPRQY-KALAAGADHSVAL 154

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++  WG G  G+LG       LG +   S  TP L+      KV   A G+ H+A 
Sbjct: 155 TDDGELYVWGGGSEGQLG-------LGDIDDKS--TPTLLS--TDNKVISVACGYYHTAF 203

Query: 253 IDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
           + + G V+ FG+    K+    +   A  P  ++    ++ V CGG HT VLT  G++YT
Sbjct: 204 VTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSHTVVLTECGKVYT 263

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPV-DQICTSIVLVSCGWKHTAAISE-GKIL 369
           +G   NG LG           + +  + E+PV       +  ++ G  HTA ++E G++ 
Sbjct: 264 FGEGGNGQLG----------HKNKYFYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLY 313

Query: 370 TWGWG 374
           T+G G
Sbjct: 314 TFGDG 318



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 20/283 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D+G+LG+  ++   RP      +   +K +ACG  HT+  TE+GC+Y  G N  GQ
Sbjct: 60  FGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQ 119

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ E+I  S  P+++    ++   ++ G  HS A+T DGELY+WG  S GQLGLG    
Sbjct: 120 LGV-EDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDD 178

Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           K  P  + T  + +S       A G+  +  VT  G+V ++G G  G+LG G +      
Sbjct: 179 KSTPTLLSTDNKVIS------VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYG---- 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-HAR 279
                   P+ +   E  K K  A G  H+  + E G+VY FG+    ++  +    +  
Sbjct: 229 ----KAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCE 282

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            P  ++      ++  G  HT ++T  G+LYT+G   +  LG+
Sbjct: 283 TPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGL 325



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 36/258 (13%)

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           + G   K  A G E +  VT  G++ ++G    G+LG      I     ST    P  +K
Sbjct: 33  VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLG------IDEVKVSTR---PCCVK 83

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EE 292
           +L+  KVK+ A G +H+    E+G +Y FG     ++  ++   +  P  +   P   + 
Sbjct: 84  KLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKA 143

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           +  G  H+  LT  GELY WG    G LG+G ID   +P  +               ++ 
Sbjct: 144 LAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLS----------TDNKVIS 193

Query: 353 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGEN 410
           V+CG+ HTA +++ G++ T+G G             GG+LG G D    + P  VN  E 
Sbjct: 194 VACGYYHTAFVTDVGEVFTFGEG------------DGGKLGQGTDYGKAVAPKKVNIPE- 240

Query: 411 VKALQVSCGFNHTGALLE 428
            KA  V+CG +HT  L E
Sbjct: 241 -KAKSVACGGSHTVVLTE 257



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 18/179 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG G  G+LGLG ++ +  P + S   K  + ++ACG  HT F+T+ G V+  G  D G
Sbjct: 162 VWGGGSEGQLGLGDIDDKSTPTLLSTDNK--VISVACGYYHTAFVTDVGEVFTFGEGDGG 219

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG   + G ++ P +++ + ++   ++ G  H+  +T  G++Y +G+  NGQLG   K 
Sbjct: 220 KLGQGTDYGKAVAPKKVN-IPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKY 278

Query: 162 AKVIPIPTKVECLSGIF------TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                      C + ++        Q A G   +  VT  G++ ++G G   +LG   E
Sbjct: 279 ---------FYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE 328


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 164/324 (50%), Gaps = 26/324 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++++ D  +    G     I +   R +   +G+ D+G+LGLG ++   +P    + +
Sbjct: 29  SKFWIRNDKAMHISCGDEHSAIITESGRLYT--FGSNDWGQLGLGHMKPTTKPGCVKSLK 86

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           +  +  +ACG +HT+  T+ G +Y+ G    GQLG  +    +  P  I+  +++   +S
Sbjct: 87  QEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGD-AQCATSPQLINLPEQKYKLLS 145

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS+A+T DG LYMWG  S GQLGLG   +  +  P +++  S +     + G+  +
Sbjct: 146 AGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDS--VETPKELKFHSSV--SWVSCGYYHT 201

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  GK+ ++G    G+LG  ++      L  T+  TP+ ++ +   K+K+ A G  H
Sbjct: 202 AIVTDDGKLYTFGEKEFGKLGLTEDQ-----LEDTT--TPKHVESIT-EKIKLVACGGAH 253

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLP--YSEEVVCGGYHTCV 302
           +A I + G +Y FG    D M  Q GN         P  +++L     + V CG  HT V
Sbjct: 254 TAVISDVGNLYTFG----DGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAV 309

Query: 303 LTSGGELYTWGSNENGCLGIGSID 326
           +T  G +YT+G   +G LGI   D
Sbjct: 310 ITEKGAMYTFGDGRHGKLGISEED 333



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 164/330 (49%), Gaps = 32/330 (9%)

Query: 57  ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +SR+   + S F   + KA+  +CG  H+  +TE+G +Y  G ND+GQLG+  ++  + +
Sbjct: 20  KSRFADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLG-HMKPTTK 78

Query: 115 PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  +  LK+E V  ++ G  H+   T  G LY +G  S+GQLG G       P   ++  
Sbjct: 79  PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSP---QLIN 135

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L     K  + G + S A+T  G +  WG+G  G+LG G   S+          TP+ +K
Sbjct: 136 LPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSV---------ETPKELK 186

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE 291
                 V   + G+ H+A + ++G++Y FG++   K+   E        P  +  +    
Sbjct: 187 FHS--SVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKI 244

Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTS 349
           ++V CGG HT V++  G LYT+G   +G LG G S+  L  P++V    SE         
Sbjct: 245 KLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKV-ARLSEHKCK----- 298

Query: 350 IVLVSCGWKHTAAISE-GKILTWGWGGSHG 378
              VSCG  HTA I+E G + T+G  G HG
Sbjct: 299 --YVSCGDNHTAVITEKGAMYTFG-DGRHG 325



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 159/345 (46%), Gaps = 43/345 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG ++      FG+   ++N+     P +      + + IS G  HS+ IT  G LY
Sbjct: 9   IPETGAIFT-----FGKSRFADNL-----PSKFWIRNDKAMHISCGDEHSAIITESGRLY 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +G N  GQLGLG    K    P  V+ L        A G   ++  T  G++ S+GAG 
Sbjct: 59  TFGSNDWGQLGLGH--MKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGS 116

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G          +    +P+LI  L   K K+ +AG  HSA +  +G +Y++G  
Sbjct: 117 DGQLGTGD---------AQCATSPQLIN-LPEQKYKLLSAGTDHSAALTTDGTLYMWGSG 166

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +  ++     +    P  +        V CG YHT ++T  G+LYT+G  E G LG+   
Sbjct: 167 SEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGL--- 223

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
               + ++++   +   V+ I   I LV+CG  HTA IS+ G + T+G  G H       
Sbjct: 224 ----TEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDVGNLYTFG-DGMH------- 271

Query: 385 HSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 428
               GQLG+G  +  +  P  V      K   VSCG NHT  + E
Sbjct: 272 ----GQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITE 312



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 6/133 (4%)

Query: 43  WGNGDYGRLGL--GSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +G  ++G+LGL    LE    P  V S  EK  +K +ACGGAHT  +++ G +Y  G   
Sbjct: 213 FGEKEFGKLGLTEDQLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFGDGM 270

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG   ++     P +++ L +   + +S G +H++ IT  G +Y +G   +G+LG+ 
Sbjct: 271 HGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGIS 330

Query: 159 KKAAKVIPIPTKV 171
           ++    I  P KV
Sbjct: 331 EEDFCNIFKPCKV 343


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 146/330 (44%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K  A++ GG H + L+  G VY+ G  D G
Sbjct: 4052 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4112 KLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4171

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4172 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4223

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I  L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4224 ---SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4280

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   LH P  V   
Sbjct: 4281 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHAL 4340

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4341 QGK--------KITRVACGSAHTLAWSTAK 4362



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 178/396 (44%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C +        LA GG  TLF +T  G +Y+TG    G
Sbjct: 3999 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKIYSTGYGAAG 4057

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  I   LE ++   +KK  V +S+G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 4058 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G K +     P  +E L G+     A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4116 GNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4169

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P++++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4170 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4224

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4225 DGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4284

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A S+ G++ TWG             +  G
Sbjct: 4285 VAALQG-----------KKIISIATGSLHCVACSDKGEVFTWG------------DNDEG 4321

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4322 QLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4357



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 149/326 (45%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       +  +K +A   GG H L LT+ G V++ G  + G
Sbjct: 3070 GEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3129

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    I    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 3130 KLGHGNCISLD-KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3188

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +  P    V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3189 ITQTRP--KLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG----- 3241

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP L+  L  + V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3242 ----SDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3297

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3298 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHD 3357

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 3358 -LEDARVNR-------VSCGSSHSIA 3375



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 201/424 (47%), Gaps = 46/424 (10%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
            +L  D ++  K    +R + +  Q+    +WG  D  +LG G   S+ + PV      K 
Sbjct: 2987 FLASDWEVLQKQIAIQRSVDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPVYSETLSK- 3044

Query: 72   SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
             LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++     EP  I  L + V++  
Sbjct: 3045 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNMCEPKAIPFLSQFVIKKV 3102

Query: 128  -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
             + +G  H+ A+T DG+++ WG+  +G+LG G   +  +  P  +E L     +  A G 
Sbjct: 3103 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEVLKSKRIRDIACGS 3160

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A G
Sbjct: 3161 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALIGHRVVQVACG 3211

Query: 247  F--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCV 302
                 +  +  +G VY +GD    K+     +    P L+ +L      +V CG   +  
Sbjct: 3212 SRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLA 3271

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
            LT  GE++TWG  +   LG G+   +  P  V+G   +         I+ V+ G  H  A
Sbjct: 3272 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK--------IIHVAVGALHCLA 3323

Query: 363  ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
            +++ G++  WG         ++ H   GQ G+G       P++V+  E+ +  +VSCG +
Sbjct: 3324 VTDTGQVYAWG---------DNDH---GQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSS 3371

Query: 422  HTGA 425
            H+ A
Sbjct: 3372 HSIA 3375



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 162/349 (46%), Gaps = 40/349 (11%)

Query: 88   ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
            +   VY  GLND  QLG  +     L     +  K + + I+ G      ++ +G+LY  
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G+ +NG+LGLG      +  P  +  LS    K+ A+  G + ++A+T  GKV SWG G 
Sbjct: 3070 GEGTNGRLGLGDDNN--MCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE 3127

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG   S+           P+LI+ L+  +++  A G  HSA I  NG +Y +G  
Sbjct: 3128 DGKLGHGNCISL---------DKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLG 3178

Query: 266  AVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLG 321
               ++   +     RP L+  L      +V CG     T  LT+ G +Y+WG  + G LG
Sbjct: 3179 EYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLG 3238

Query: 322  IGSIDVLHSPERVQGPFSESPVDQICT-SIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
             G  D         G ++   VD++    ++ V CG + + A+++ G++ TWG G     
Sbjct: 3239 RGGSD---------GCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYF-- 3287

Query: 380  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                      +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3288 ----------RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3326



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 142/315 (45%), Gaps = 26/315 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           T +Y     +LG K   C        +R    L  NG+   +  GS E+++ P     F 
Sbjct: 514 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 564

Query: 70  KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
              +  +A    G H L LT+ GCVY+ G  D G+LG  + I Y    L  + L+K ++ 
Sbjct: 565 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIF 624

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
           I+ G  +S+A++ +GELY WG+ + G+LG G      +  PT V  L G      A G  
Sbjct: 625 IACGSTYSAALSANGELYTWGRGNYGRLGHGN--FDDVMTPTLVTTLKGHTVVHVACGSG 682

Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
             Q++ VT  G V SWG G  G+LG G          +    TP+++ +L  + V     
Sbjct: 683 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 733

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G   SA +  +G VY +G     ++      H R P +I  L     +++  G  H   L
Sbjct: 734 GSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILAL 793

Query: 304 TSGGELYTWGSNENG 318
           T    +Y WG N+ G
Sbjct: 794 TEDQFVYGWGRNDYG 808



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 159/347 (45%), Gaps = 44/347 (12%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
            +G +Y  G N  GQLG  E     L  P   +S L+   +Q++ G     A+T DG++Y 
Sbjct: 3993 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKIYS 4050

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
             G  + G+LG+G      + IPT +E +  +F K+ A+  G +  +A++  G V SWG G
Sbjct: 4051 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG 4108

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
              G+LGHG +          S   P+LI++L GV++   A G  HSA I   G +Y +G 
Sbjct: 4109 DDGKLGHGNK---------VSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGK 4159

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
                ++   + +   RP ++  L   +  +V CG     T  +T    +++WG  + G L
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4219

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHG 378
            G G  D    P +         +D +    +V V CG + + A++  G + TWG G  H 
Sbjct: 4220 GRGGSDGCKVPLK---------IDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH- 4269

Query: 379  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                       +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4270 -----------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4305



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 128/289 (44%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G +  KV  +P   E LS +   Q A G +   AVT  GK+ S 
Sbjct: 3994 GAIYGWGHNHRGQLG-GLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYST 4051

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G +GRLG G   S++          P L++ ++ V +K  A  +G  H   +   G V
Sbjct: 4052 GYGAAGRLGIGGTDSVM---------IPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHV 4102

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP LI  L   E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 4103 YSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY 4162

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  D    P+ V+       +D  C S      G   T  +++   + W WG   
Sbjct: 4163 GRLGHGDSDDQLRPKVVEALQDYKVIDVACGS------GDAQTLCVTDDDNV-WSWG--- 4212

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 4213 -----DGDY--GKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL 4254



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 139/323 (43%), Gaps = 44/323 (13%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C A  +  +K L C     + L+  G VY              N+ +  E   P R+
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 560

Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
            G   + + +   +    H  A+T DG +Y WG    G+LG G   +     P  +E L 
Sbjct: 561 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTIS--YDEPKLIEALL 618

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                  A G   S A++  G++ +WG G  GRLGHG    ++         TP L+  L
Sbjct: 619 EKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVM---------TPTLVTTL 669

Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
           +G  V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      
Sbjct: 670 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 729

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V CG   +  LT+ GE+YTWG  +   LG GS + +  P+ ++        D       
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKD------- 782

Query: 352 LVSCGWKHTAAISEGKILTWGWG 374
            +S G  H  A++E + + +GWG
Sbjct: 783 -LSVGTTHILALTEDQFV-YGWG 803



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N   QLG G K +K I +P   E LS +     A G +    V+  GK+ + G 
Sbjct: 3014 VYVWGLNDKDQLG-GLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGE 3071

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G ++++           P+ I  L    +K  A  +G  H+  + ++G+V+ 
Sbjct: 3072 GTNGRLGLGDDNNMC---------EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3122

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P LI  L      ++ CG  H+  + S GELYTWG  E G 
Sbjct: 3123 WGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3182

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILTWGWGGS 376
            LG G       P+ VQ          I   +V V+CG +     A  ++G + +WG    
Sbjct: 3183 LGHGDTITQTRPKLVQA--------LIGHRVVQVACGSRDAQTMALTTDGYVYSWG---- 3230

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
             G F        G+LG G       P +V+   N+  +QV CG   + AL +Y
Sbjct: 3231 DGDF--------GKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKY 3275



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G+ +    P + +  + H++  +ACG   + TL +T +G V++ G  D+
Sbjct: 644 WGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 703

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG     G     +    L   VV++  G   S+A+T  GE+Y WGK    +LG G +
Sbjct: 704 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSE 763

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +  P  +E L     K  ++G    +A+T    V  W     GR  +GQ    LG 
Sbjct: 764 --EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 816

Query: 221 LRSTSEYTPRL 231
           + S     P L
Sbjct: 817 IISEPTLCPTL 827



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 581 LALTQDGCVYSWGNGDGGRLGHGD---------TISYDEPKLIEALLEKNIIFIACGSTY 631

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 632 SAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G +++WG  + G LG G  D   +P+ V              ++V V CG + +AA++ 
Sbjct: 692 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLD--------INVVKVFCGSQFSAALTA 743

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G ++            +LGHG++    +P ++    + K   +S G  H  
Sbjct: 744 HGEVYTWGKGDAY------------RLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHIL 791

Query: 425 ALLE 428
           AL E
Sbjct: 792 ALTE 795


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  127 bits (319), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 158/351 (45%), Gaps = 48/351 (13%)

Query: 86   LTETGCVYATGLNDFGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            LTE G VY  G           LGI + I   L P ++  L  +VV +S G+ H +A+  
Sbjct: 764  LTENGDVYLWGRGAVKTPAVPILGIPQ-IEDQLLPFKLESLS-DVVSVSIGFCHGAAVRA 821

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
            +GEL  WG   NGQLG G    ++   P  ++ L+  +  Q   G + ++ +T  GKV S
Sbjct: 822  NGELLTWGVGENGQLGHGDTNNQI--EPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYS 879

Query: 201  WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            WGA   G+LG G           T   +P  +  LE   V   A+G  H A +  +  V 
Sbjct: 880  WGASEYGQLGLGD---------VTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVL 930

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +FG+ A         +    P+L+  L Y   + + CG Y T  +T  G++YTWG+ +  
Sbjct: 931  VFGNGAA----MGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE- 985

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSH 377
             LG G      SP+ ++   ++        SI  +SCG +HTA +++ G+I T G     
Sbjct: 986  -LGHGGNSTETSPKLIEALRNQ--------SIRQISCGGRHTAFLTDSGRIFTCG----K 1032

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +F + G  SG         D   P  +        + VSCG N+  AL +
Sbjct: 1033 DSFGQLGQMSG---------DQNKPKRIESLTKTTFISVSCGENYNVALFD 1074



 Score =  114 bits (286), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 22/264 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G   ++  P +  +     +  + CG  HT+ LT+ G VY+ G +++GQ
Sbjct: 828  WGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG+ +   +S  P+++S L+K  V+QI++G  H + +T   E+ ++G       G    A
Sbjct: 888  LGLGDVTQHS-SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN------GAAMGA 940

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            A V+ +PT V  L  +   +   G   + A+T  G V +WG G    LGHG  S      
Sbjct: 941  ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG--QELGHGGNS------ 992

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               +E +P+LI+ L    ++  + G  H+A + ++GR++  G  +  ++    G+   +P
Sbjct: 993  ---TETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQ-NKP 1048

Query: 282  SLISKLPYSE--EVVCGGYHTCVL 303
              I  L  +    V CG  +   L
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVAL 1072



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 89/342 (26%), Positives = 133/342 (38%), Gaps = 68/342 (19%)

Query: 134  HSSAITVDGE--LYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSV 190
            H SAI +D    L  WG  SN +LG    A  +  P P ++   +       + G   S 
Sbjct: 703  HRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSS 762

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T  G V  WG G            ILG  +   +  P  ++ L  V V ++  GF H 
Sbjct: 763  VLTENGDVYLWGRGAV----KTPAVPILGIPQIEDQLLPFKLESLSDV-VSVSI-GFCHG 816

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
            A +  NG +  +G     ++   + N+   P +I  L   +  +V CG  HT  LT  G+
Sbjct: 817  AAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGK 876

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS------------------- 349
            +Y+WG++E G LG+G +    SP +V     +  V QI +                    
Sbjct: 877  VYSWGASEYGQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935

Query: 350  ----------------------IVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 386
                                  I  + CG   TAAI+E G + TWG              
Sbjct: 936  AAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWG-------------- 981

Query: 387  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +G +LGHG +     P ++    N    Q+SCG  HT  L +
Sbjct: 982  TGQELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTD 1023


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 167/341 (48%), Gaps = 27/341 (7%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P   +  + + ++ +ACG  +T+ +T+ G VY+ G ND 
Sbjct: 4   WGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDH 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +  G     L ISG+      + + G  H+  +   G+L+ WG N  GQLGL +
Sbjct: 64  GQLG--QEKGRKRLQL-ISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDR 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +A  I  P  V+ L      Q A G + S+A+T  G++ +WG+   G+LG G ++ +  
Sbjct: 121 VSA-TIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKM-- 177

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+L+  L  V +   A G  H+  I ++G V+ +G     ++   +  +  
Sbjct: 178 ------ELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  S      CG   +  LT  G ++T G+   G LG G+      P ++   
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQI--- 288

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGS 376
                ++ + +++  +SCG +HT A+  S G++  WG GG+
Sbjct: 289 -----MELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGA 324



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D+G+LG    + R R  + S  +  + +  ACG +HTL + E G +++ G N  GQL
Sbjct: 59  GNNDHGQLG--QEKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQL 116

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+        EP  +  L  K +VQI+ G  HS A+T +GELY WG NS+GQLGLG    
Sbjct: 117 GLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSD-T 175

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K+   P  V  L+ +     A G   ++ ++  G V +WG    G+LG       L  ++
Sbjct: 176 KMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLG-------LSDIQ 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L   +V  AA G   S  +  +G V+  G     ++          P 
Sbjct: 229 NRN--VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            I +L  S   ++ CG  HT  L  S G +Y WG    G LG        +P+ V GP
Sbjct: 287 QIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFGP 344



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 166/338 (49%), Gaps = 48/338 (14%)

Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG+     ENI     P  ++  K  E+ QI+ G +++ A+T +G++Y  G N +GQL
Sbjct: 10  GELGLGGIEDENI---FTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQL 66

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  +K  K + + + ++ L+    ++AA G   ++ V   G++ SWG+   G+LG  + S
Sbjct: 67  G-QEKGRKRLQLISGIDPLA---FRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVS 122

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
           + +          PR++K L G K+ +  A G  HS  +  NG +Y +G  +  ++ L  
Sbjct: 123 ATIR--------EPRMVKTL-GTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           +     +P L+  L   P +  V CGGYHT V++  G ++ WG N  G LG+  I   + 
Sbjct: 174 DTKMELKPKLVHSLAAVPIAF-VACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNV 232

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P +++   +     ++C +    +CG + +  ++ +G + T G G              G
Sbjct: 233 PCQLRTLRNS----RVCYA----ACGEEFSVFLTMDGGVFTCGAGMY------------G 272

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           QLGHGN    I P  +         Q+SCG  HT AL+
Sbjct: 273 QLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALV 310



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL  +++R  P          +   ACG   ++FLT  G V+  G   +GQ
Sbjct: 214 WGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
           LG        L    +  +   V QIS G  H+ A+    G +Y WG    GQLG
Sbjct: 274 LGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 162/345 (46%), Gaps = 38/345 (11%)

Query: 92  VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +++ G N++G+L +   N    LE +     K  +  ++ G    + +  DG ++  G N
Sbjct: 466 LFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKG-IRDVAGGNEVLAVVMNDGGVFTCGLN 524

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
            +GQ G G    +VI I T V  LSGI      AA G E  +AV   G V SWG    G+
Sbjct: 525 KSGQCGNGTFEERVI-IATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQ 583

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LG G  S+I      +  +TPR+I  L E   +  AA  + HSA +  NG +  FG    
Sbjct: 584 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            ++      H   P ++  L  S +VV    CG YHT   TS GE+Y++G N+ G LG+G
Sbjct: 636 GQLGLDHTQHQHTPQVVDAL--SSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLG 693

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
               + +P  V+    ES  D+    IV VSCG+ HT  ISE GK++TWG          
Sbjct: 694 HARNIKTPALVKTSLGES--DE---KIVAVSCGYYHTVTISEKGKLITWG---------- 738

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
              +  GQLG G+         V    + K    SCG  H+  L+
Sbjct: 739 --RNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILM 781



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 175/393 (44%), Gaps = 48/393 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  +YG L LG   S  +      F    ++ +A G      +   G V+  GLN  GQ 
Sbjct: 470 GQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTCGLNKSGQC 529

Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G     E +  +     +SG+   +V  + G  H  A+  DG ++ WG N  GQLGLG  
Sbjct: 530 GNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGST 589

Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
            +K    P  ++ L   +    AA+ +  S  V+  G++L++G    G+LG  H Q    
Sbjct: 590 ISKSH-TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQH--- 645

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                   ++TP+++  L    V  AA G  H+     +G VY FG     ++      +
Sbjct: 646 --------QHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARN 697

Query: 278 ARRPSLI-SKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            + P+L+ + L  S+E    V CG YHT  ++  G+L TWG N+ G LGIGS +  +S +
Sbjct: 698 IKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQ 757

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
            V  P S        + I   SCG  H+  + S G+++ +            G ++ GQL
Sbjct: 758 FVPLPMS--------SKIKNASCGCYHSLILMSNGRVMVF------------GRNNKGQL 797

Query: 392 GHG----NDVDYIHPTIVNFGENVKALQVSCGF 420
           G G    +  D   P   N   N + ++++ GF
Sbjct: 798 GAGARTLSSADLPLPVPSNSLANDEVVRIAAGF 830



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 18/227 (7%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+LGLGS   +S    ++ S  EK+ +   A    H+  ++  G +   G+ND 
Sbjct: 576 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+ ++  +   P  +  L  +VV + + G +H+ A T DGE+Y +GKN  GQLGLG 
Sbjct: 636 GQLGL-DHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGH 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             A+ I  P  V+   G   ++    + G+  +V ++  GK+++WG    G+LG G +  
Sbjct: 695 --ARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEH 752

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                ++++++ P  +      K+K A+ G  HS  +  NGRV +FG
Sbjct: 753 -----KNSAQFVPLPMSS----KIKNASCGCYHSLILMSNGRVMVFG 790



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 27/234 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D G+LGL   + +  P V  A     +   ACG  HT+  T  G VY+ G ND+GQ
Sbjct: 630 FGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQ 689

Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG- 158
           LG+          L  + L    +++V +S GY+H+  I+  G+L  WG+N  GQLG+G 
Sbjct: 690 LGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749

Query: 159 ---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
              K +A+ +P+P   +       K A+ G   S+ +   G+V+ +G    G+LG G  +
Sbjct: 750 KEHKNSAQFVPLPMSSKI------KNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGART 803

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
                L S     P     L   +V   AAGF  S         YI   R+ D 
Sbjct: 804 -----LSSADLPLPVPSNSLANDEVVRIAAGFYSS---------YILTGRSSDN 843


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 146/330 (44%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K  A++ GG H L L+  G VY+ G  D G
Sbjct: 4001 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E++ I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4061 KLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4120

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4121 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4172

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I  L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4173 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4229

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   LH P  V   
Sbjct: 4230 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHAL 4289

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4290 QGK--------KITRVACGSAHTLAWSTAK 4311



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 152/326 (46%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       +  +K +A   GG H L LT+ G V++ G  + G
Sbjct: 3019 GEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3078

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N+    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 3079 KLGHGNNMSLD-KPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3137

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +    P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3138 VTQA--RPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 3190

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP +++ L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3191 ----SDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3246

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3247 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVH- 3305

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 3306 ELEDARVNR-------VSCGSSHSIA 3324



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 178/396 (44%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C +        LA GG  TLF +T  G VY+TG    G
Sbjct: 3948 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 4006

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  I   LE ++   +KK  V +S+G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 4007 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGH 4064

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G K +     P  +E L G+     A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4065 GNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4118

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P++++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4119 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4173

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4174 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4233

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A S+ G++ TWG             +  G
Sbjct: 4234 VAALQG-----------KKIISIATGSLHCVACSDKGEVFTWG------------DNDEG 4270

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4271 QLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4306



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 164/361 (45%), Gaps = 64/361 (17%)

Query: 88   ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            +   VY  GLND  QLG          +   +   L+P+ I+G  K +  +S        
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQ------- 3011

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
               +G+LY  G+ +NG+LGLG       P P  +  LS    K+ A+  G + ++A+T  
Sbjct: 3012 ---EGKLYACGEGTNGRLGLGDDNNVCEPKP--IPFLSQFVIKKVAVHSGGKHALALTQD 3066

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV SWG G  G+LGHG   S+           P+LI+ L+  +++  A G  HSA I  
Sbjct: 3067 GKVFSWGEGEDGKLGHGNNMSL---------DKPKLIETLKSKRIRDIACGSGHSAAIAS 3117

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYT 311
            NG +Y +G     ++   +     RP L+  L      +V CG     T  LT+ G +Y+
Sbjct: 3118 NGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYS 3177

Query: 312  WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
            WG  + G LG G  D  ++P   ER+ G             +V V CG + + A+++ G+
Sbjct: 3178 WGDGDFGKLGRGGSDGCYTPLVVERLNG-----------LGVVQVECGAQFSLALTKYGE 3226

Query: 368  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            + TWG G               +LGHGND     PT+V      K + V+ G  H  A+ 
Sbjct: 3227 VWTWGKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVT 3274

Query: 428  E 428
            +
Sbjct: 3275 D 3275



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 202/425 (47%), Gaps = 47/425 (11%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEK 70
            +L  D ++  +    +R I +T  +  A  +WG  D  +LG G   S+ + PV      K
Sbjct: 2935 FLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK 2993

Query: 71   HSLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ- 127
              LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++     EP  I  L + V++ 
Sbjct: 2994 --LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKPIPFLSQFVIKK 3050

Query: 128  --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              + +G  H+ A+T DG+++ WG+  +G+LG G   +  +  P  +E L     +  A G
Sbjct: 3051 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDIACG 3108

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
               S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A 
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TVTQARPKLVQTLVGHRVVQVAC 3159

Query: 246  GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTC 301
            G     +  +  +G VY +GD    K+     +    P ++ +L      +V CG   + 
Sbjct: 3160 GSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSL 3219

Query: 302  VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
             LT  GE++TWG  +   LG G+   +  P  V+G   +         IV V+ G  H  
Sbjct: 3220 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK--------IVHVAVGALHCL 3271

Query: 362  AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
            A+++ G++  WG         ++ H   GQ G+G       P++V+  E+ +  +VSCG 
Sbjct: 3272 AVTDTGQVYAWG---------DNDH---GQQGNGTTSVNRKPSLVHELEDARVNRVSCGS 3319

Query: 421  NHTGA 425
            +H+ A
Sbjct: 3320 SHSIA 3324



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 144/315 (45%), Gaps = 26/315 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           T +Y     +LG K   C        +R    L  NG+   +  GS E+++ P     F 
Sbjct: 455 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 505

Query: 70  KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
              +  +A    G H L LT+ GCVY+ G  D G+LG  + + Y    L  + L+K +V 
Sbjct: 506 DKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVF 565

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
           I+ G  +S+A++V GELY WG+ + G+LG G      + IPT V  L G      A G  
Sbjct: 566 IACGSTYSAALSVSGELYTWGRGNYGRLGHGN--FDDVMIPTLVTTLKGHTVVHVACGSG 623

Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
             Q++ VT  G V SWG G  G+LG G          +    TP+++ +L  + V     
Sbjct: 624 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 674

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G   SA +  +G VY +G     ++      H R P +I  L     +++  G  H  VL
Sbjct: 675 GSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVL 734

Query: 304 TSGGELYTWGSNENG 318
           T    +Y WG N+ G
Sbjct: 735 TEDQFVYGWGRNDYG 749



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 161/347 (46%), Gaps = 44/347 (12%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
            +G +Y  G N  GQLG  E     L  P   +S L+   +Q++ G     A+T DG++Y 
Sbjct: 3942 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3999

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
             G  + G+LG+G      + IPT +E +  +F K+ A+  G +  +A++  G V SWG G
Sbjct: 4000 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEG 4057

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
              G+LGHG +   + + R      P+LI++L GV++   A G  HSA I   G +Y +G 
Sbjct: 4058 DDGKLGHGNK---MSYDR------PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGK 4108

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
                ++   + +   RP ++  L   +  +V CG     T  +T    +++WG  + G L
Sbjct: 4109 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4168

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHG 378
            G G  D    P +         +D +    ++ V CG + + A++  G + TWG G  H 
Sbjct: 4169 GRGGSDGCKVPLK---------IDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH- 4218

Query: 379  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                       +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4219 -----------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4254



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 128/289 (44%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G +  KV  +P   E LS +   Q A G +   AVT  GKV S 
Sbjct: 3943 GAIYGWGHNHRGQLG-GLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 4000

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G +GRLG G   S++          P L++ ++ V +K  A  +G  H   +   G V
Sbjct: 4001 GYGAAGRLGIGGTDSVM---------IPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHV 4051

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP LI  L   E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 4052 YSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRY 4111

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  D    P+ V+       +D  C S      G   T  +++   + W WG   
Sbjct: 4112 GRLGHGDSDDQLRPKVVEALQDYKVIDVACGS------GDAQTLCVTDDDNV-WSWG--- 4161

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 4162 -----DGDY--GKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4203



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 46/324 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C A  +  +K L C     + L+  G VY              N+ +  E   P R+
Sbjct: 456 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 501

Query: 119 SGLKKEVVQI----STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
            G   ++V +    S G HH  A+T DG +Y WG    G+LG G   +     P  +E L
Sbjct: 502 HGFSDKLVTMIASHSDGKHHL-ALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIEAL 558

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                   A G   S A++  G++ +WG G  GRLGHG    ++          P L+  
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVM---------IPTLVTT 609

Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           L+G  V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL     
Sbjct: 610 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 669

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   +  LT+ GE+YTWG  +   LG GS + +  P+ +     ES  D+    I
Sbjct: 670 VKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKII-----ESLRDK---KI 721

Query: 351 VLVSCGWKHTAAISEGKILTWGWG 374
             +S G  H   ++E + + +GWG
Sbjct: 722 KDLSVGATHILVLTEDQFV-YGWG 744



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 137/315 (43%), Gaps = 40/315 (12%)

Query: 124  EVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
            EV+Q       S   T   E  +Y+WG N   QLG G K +K I +P   E LS +    
Sbjct: 2941 EVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIH 2998

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             A G +    V+  GK+ + G G +GRLG G ++++           P+ I  L    +K
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC---------EPKPIPFLSQFVIK 3049

Query: 242  IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
              A  +G  H+  + ++G+V+ +G+    K+         +P LI  L      ++ CG 
Sbjct: 3050 KVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGS 3109

Query: 298  YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             H+  + S GELYTWG  E G LG G       P+ VQ          +   +V V+CG 
Sbjct: 3110 GHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQT--------LVGHRVVQVACGS 3161

Query: 358  KHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            +     A  ++G + +WG     G F        G+LG G       P +V     +  +
Sbjct: 3162 RDAQTMALTTDGCVYSWG----DGDF--------GKLGRGGSDGCYTPLVVERLNGLGVV 3209

Query: 415  QVSCGFNHTGALLEY 429
            QV CG   + AL +Y
Sbjct: 3210 QVECGAQFSLALTKY 3224



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 9/191 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G+ +    P + +  + H++  +ACG   + TL +T +G V++ G  D+
Sbjct: 585 WGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 644

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG     G     +    L   VV++  G   S+A+T  GE+Y WGK    +LG G +
Sbjct: 645 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSE 704

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +  P  +E L     K  ++G    + +T    V  W     GR  +GQ    LG 
Sbjct: 705 --EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGW-----GRNDYGQIDPTLGS 757

Query: 221 LRSTSEYTPRL 231
           + S     P L
Sbjct: 758 VISEPTLCPTL 768



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 522 LALTQDGCVYSWGNGDGGRLGHGD---------TVSYDEPKLIEALLEKNIVFIACGSTY 572

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  +G +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 573 SAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTA 632

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G +++WG  + G LG G  D   +P+ V              ++V V CG + +AA++ 
Sbjct: 633 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLD--------INVVKVFCGSQFSAALTA 684

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G ++            +LGHG++    +P I+    + K   +S G  H  
Sbjct: 685 HGEVYTWGKGDTY------------RLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHIL 732

Query: 425 ALLE 428
            L E
Sbjct: 733 VLTE 736


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 155/326 (47%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P +     ++ +K +A   GG H L LT+ G +++ G  + G
Sbjct: 3317 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDG 3376

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   ++    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3377 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3435

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++   P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3436 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3488

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3489 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3544

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3545 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3604

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 3605 -LDDARVNR-------VSCGSSHSIA 3622



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 145/330 (43%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4410 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4469

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4470 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4521

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4522 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4578

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4579 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHAL 4638

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4639 QGK--------KITRVACGSAHTLAWSTMK 4660



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 176/395 (44%), Gaps = 48/395 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         PV+C +        L  G    L +T  G VYATG    G+
Sbjct: 4297 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4356

Query: 103  LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG G
Sbjct: 4357 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4414

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +   +   P  +E L G      A G   S A+T  G + +WG G  GRLGHG      
Sbjct: 4415 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4467

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  + TP+L++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     +
Sbjct: 4468 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4523

Query: 277  HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +V
Sbjct: 4524 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4583

Query: 335  ---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
               QG             I+ ++ G  H  A ++ G++ TW            G +  GQ
Sbjct: 4584 AALQG-----------KKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQ 4620

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            LG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4621 LGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4655



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 192/395 (48%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + PV      K  LK +   GG+ TLF+ ++ G +YA G  
Sbjct: 3263 VWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKLYACGEG 3319

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+ ++     EP  I  L + +++   + +G  H+ A+T DG+++ WG+  +G+L
Sbjct: 3320 TNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKL 3378

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3379 GHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGD-- 3434

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L++ L G +V   A G     +  +  +G VY +GD    K+   
Sbjct: 3435 -------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3487

Query: 274  EGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3488 GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3547

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              V+G   +         +V V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3548 TLVEGLRGKK--------VVHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQ 3587

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G+G+ +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3588 QGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3622



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 64/357 (17%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQ----------E 3310

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +   +  P  +  LS    K+ A+  G + ++A+T  GK+ 
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSN--VCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIF 3368

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 3369 SWGEGEDGKLGHGN---------SVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3419

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      +V CG     T  LT+ G +Y+WG  
Sbjct: 3420 YTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3479

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTW 371
            + G LG G  D  ++P   +R+ G             +V + CG + + A+++ G++ TW
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNG-----------LGVVQIECGAQFSLALTKYGEVWTW 3528

Query: 372  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G G               +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3529 GKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3573



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 153/344 (44%), Gaps = 38/344 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4350

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 4351 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4408

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4409 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P L+  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4460 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4519

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            G  D    P +++              ++ V CG + + A++  G I TWG G  H    
Sbjct: 4520 GGSDGCKIPMKIESLAG--------LGVIKVECGSQFSVALTRSGAIYTWGKGDYH---- 4567

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                    +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4568 --------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4603



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 15/243 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G H L LT+   VY+ G  D G+LG  + + Y    L  + + K +  I+ G  +S+ ++
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 573

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
            +GELY WG+ + G+LG G   +  + IPT V  L+G      A G    Q++ VT  G 
Sbjct: 574 SNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGI 631

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LG G               TP+++ +L  + V     G   SA +   G
Sbjct: 632 VFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 682

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      H R P +I  L     +E+  G +H   LT    +Y WG N
Sbjct: 683 EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRN 742

Query: 316 ENG 318
           + G
Sbjct: 743 DYG 745



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 139/314 (44%), Gaps = 39/314 (12%)

Query: 124  EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            E+VQ      H S        +Y+WG N   QLG G K +K I +P   E LS +     
Sbjct: 3240 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3297

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G +S++           P+LI  L    +K 
Sbjct: 3298 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3348

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
             A  +G  H+  + ++G+++ +G+    K+         +P LI  L      ++ CG  
Sbjct: 3349 MAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3408

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            H+  +TS GELYTWG  E G LG G       P+ VQ    +         ++ V+CG +
Sbjct: 3409 HSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQ--------RVIQVACGSR 3460

Query: 359  HT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
                 A  ++G + +WG     G F        G+LG G       P +++    +  +Q
Sbjct: 3461 DAQTMALTADGSVYSWG----DGDF--------GKLGRGGSDGCYTPLLIDRLNGLGVVQ 3508

Query: 416  VSCGFNHTGALLEY 429
            + CG   + AL +Y
Sbjct: 3509 IECGAQFSLALTKY 3522



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 137/320 (42%), Gaps = 38/320 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P  C A  +  +K L C     + L+ +G VY        Q            P R+ G 
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 500

Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            ++ V +   +    H  A+T D  +Y WG    G+LG G +       P  VE L    
Sbjct: 501 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 558

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               A G   S  ++  G++ +WG G  GRLGHG   ++L          P L+  L G 
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 609

Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
            V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      +V 
Sbjct: 610 MVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 669

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CGG  +  LT+ GE+YTWG  E   LG G+ + +  P+ ++       V ++C       
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV-LXTKKVKELCV------ 722

Query: 355 CGWKHTAAISEGKILTWGWG 374
            G  H  A++E + L +GWG
Sbjct: 723 -GNFHVLALTEDQ-LVYGWG 740



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 27/254 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G       P +  A    ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 529 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 588

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGL 157
           L  G S+N+   L P  ++ L    VV ++ G   S    +T  G ++ WG  + G+LG 
Sbjct: 589 LGHGNSDNV---LIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 645

Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G K  K+      V+ L  I   +   G + S A+T  G+V +WG G   RLGHG 
Sbjct: 646 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 699

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           E  I           P++I+ L   KVK    G  H   + E+  VY +G     ++   
Sbjct: 700 EEHI---------RYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA 750

Query: 274 EGNHARRPSLISKL 287
            G     P+L   L
Sbjct: 751 LGTVVPEPTLCPTL 764



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG                P+L++ L    +   A G  +
Sbjct: 518 LALTQDSSVYSWGNGDGGRLGHGDR---------VWYDEPKLVEALVDKNITFIACGSTY 568

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     ++   P+L++ L       V CG     T  +T+
Sbjct: 569 SAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTA 628

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G +++WG    G LG G  D   +P+ V              ++  V CG + +AA++ 
Sbjct: 629 SGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLD--------INVAKVYCGGQFSAALTA 680

Query: 366 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G             G +LGHGN+    +P ++      K  ++  G  H  
Sbjct: 681 YGEVYTWGKG------------EGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVL 728

Query: 425 ALLE 428
           AL E
Sbjct: 729 ALTE 732



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+YG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  +  +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 694

Query: 103 LG--ISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    E+I Y   P  I  L  K+V ++  G  H  A+T D  +Y WG+N  GQ  +  
Sbjct: 695 LGHGNEEHIRY---PKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 749

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
               V+P PT    LSG      A G  QS A
Sbjct: 750 ALGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 21/156 (13%)

Query: 274  EGNHARRPSLISKLPYSEEV-VCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EG   + P L   L     V + GG  T + +T+ G++Y  G    G LGIG  D +  P
Sbjct: 4309 EGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVP 4368

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
              ++       +  +    V V+ G KH  A+S EG + +WG G              G+
Sbjct: 4369 TLLES------IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD------------GK 4410

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            LGHGN + Y  P ++      + + ++CG +H+ A+
Sbjct: 4411 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4446



 Score = 45.1 bits (105), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 23/140 (16%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           + CG  ++ VL+S GELYTWG    G LG G+ D +  P  V               +V 
Sbjct: 562 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGH--------MVVH 613

Query: 353 VSCGWKHTAAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
           V+CG   +  +   + G + +WG G              G+LG G       P IV+   
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNY------------GKLGRGGCDGSKTPKIVDKLL 661

Query: 410 NVKALQVSCGFNHTGALLEY 429
           ++   +V CG   + AL  Y
Sbjct: 662 DINVAKVYCGGQFSAALTAY 681


>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 806

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 170/376 (45%), Gaps = 48/376 (12%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           Q   A  WG+  YG+LG G+   R+ P            AL+    HTL L + G V+  
Sbjct: 458 QDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHTLALAQDGTVWGW 517

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G ND GQLG + ++   + P  + GL   V  +++G +HS A+  DG ++ WG N+ GQL
Sbjct: 518 GYNDSGQLGDTVDM-VRVTPAPLPGLTG-VTALASGTYHSLALKQDGTVWAWGLNNLGQL 575

Query: 156 GLGKKAAKV--IPIP--TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           G G   ++   +P+P  T V  L        A     S+A+   G V +WG   SG+LG 
Sbjct: 576 GDGTTVSRTEQMPVPGLTDVTAL--------AASTYHSLALKQDGTVWTWGYNSSGQLGD 627

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G  +S L         TP  +  L GV     AAG +HS  + ++G V+ +G     ++ 
Sbjct: 628 GTTASRL---------TPAQVPGLTGVSA--IAAGLVHSLALKQDGTVWAWGRNTDGQLG 676

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                ++  P  +  L     +  G YH+  L   G  ++WG N  G LG  +I    +P
Sbjct: 677 NGAAVNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTP 736

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
            +VQG           T++  ++ G  H+ A + +G + TW            G+++ G+
Sbjct: 737 VQVQG----------LTAVTALAGGDAHSMALLRDGTVWTW------------GYNAEGE 774

Query: 391 LGHGNDVDYIHPTIVN 406
           LG G  +D   P  V 
Sbjct: 775 LGDGTTLDRTAPVRVQ 790



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG      R  P          + ALA G  H+L L + G V+A GLN+ GQ
Sbjct: 517 WGYNDSGQLGDTVDMVRVTPAPLPGLT--GVTALASGTYHSLALKQDGTVWAWGLNNLGQ 574

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  + E + + GL  +V  ++   +HS A+  DG ++ WG NS+GQLG G  A+
Sbjct: 575 LGDGTTVSRT-EQMPVPGLT-DVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTAS 632

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P   +V  L+G+     A G   S+A+   G V +WG    G+LG+G          
Sbjct: 633 RLTPA--QVPGLTGV--SAIAAGLVHSLALKQDGTVWAWGRNTDGQLGNGA--------- 679

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L GV     AAG  HS  + ++G  + +G     ++  +    +  P 
Sbjct: 680 AVNSPVPVQVQGLTGVSA--IAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTPV 737

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            +  L     +  G  H+  L   G ++TWG N  G LG G+     +P RVQG
Sbjct: 738 QVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTAPVRVQG 791



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 45/329 (13%)

Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+S +    LE   P   S   + V  I+ G  HS  +  DG    WG N  GQLG G 
Sbjct: 420 LGLSASASMILEGGTPCAPS--PRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGT 477

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + +P P +V+ L+G  T  +A  +  ++A+   G V  WG   SG+LG       + 
Sbjct: 478 SVDRFLPGPVQVQGLTGA-TALSATAY-HTLALAQDGTVWGWGYNDSGQLGD-----TVD 530

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +R     TP  +  L GV     A+G  HS  + ++G V+ +G   + ++   +G    
Sbjct: 531 MVR----VTPAPLPGLTGVTAL--ASGTYHSLALKQDGTVWAWGLNNLGQL--GDGTTVS 582

Query: 280 RPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           R     +  L     +    YH+  L   G ++TWG N +G LG G+     +P +V G 
Sbjct: 583 RTEQMPVPGLTDVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPG- 641

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                     T +  ++ G  H+ A+ +   + W W          G ++ GQLG+G  V
Sbjct: 642 ---------LTGVSAIAAGLVHSLALKQDGTV-WAW----------GRNTDGQLGNGAAV 681

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +   P  V     V A  ++ G  H+ AL
Sbjct: 682 NSPVPVQVQGLTGVSA--IAAGSYHSLAL 708


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 164/336 (48%), Gaps = 27/336 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  YG LGLG +E      P      +  +++ +ACG  HT+ +T+ G V++ G ND 
Sbjct: 31  WGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDS 90

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   +  Q + G  HS A+   G+L+ WG N++GQLGLG 
Sbjct: 91  GQLG-HEKPTKRLQ--MIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGT 147

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +   P  V+ L      Q A G + ++A+T  G++ +WG+   G+LG GQ+  I  
Sbjct: 148 PLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKI-- 204

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+LI  L  + +   A G  HS  + ++G V+ +G     ++   + +   
Sbjct: 205 ------ETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKY 258

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P L+  L  +  + V CG   +  LT  G ++T G+   G LG G+      P ++   
Sbjct: 259 VPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPRQI--- 315

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTW 371
                ++ + + +  +SCG +HT A+  S GK+  W
Sbjct: 316 -----IELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 164/347 (47%), Gaps = 48/347 (13%)

Query: 92  VYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYM 146
           +Y  G   +G+LG+     ENI   L P  +   K   V QI+ G  H+  IT DGE++ 
Sbjct: 28  MYCWGSTVYGELGLGGIEDENI---LMPRELDFQKATAVEQIACGETHTVLITKDGEVFS 84

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G N +GQLG  K   ++  IP     L     KQAA G   SVAV   G++  WG+   
Sbjct: 85  CGNNDSGQLGHEKPTKRLQMIPG----LDAFIFKQAACGASHSVAVNNWGQLFCWGSNAD 140

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   +I         +TPR++K L    V   A G  H+  +  NG +Y +G  +
Sbjct: 141 GQLGLGTPLTI--------AHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNS 192

Query: 267 VDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             ++ L Q+     RP LI+ L   P +  + CGGYH+ V++  G ++ WG N  G LG+
Sbjct: 193 DGQLGLGQDVKIETRPKLITGLATIPIAF-IACGGYHSIVVSKSGAVFGWGRNTFGQLGM 251

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
             I   + P  ++   +          +  V+CG + +  ++ +G + T G G       
Sbjct: 252 NDISDKYVPCLLKTLRN--------AKVKYVACGEEFSVFLTMDGGVFTCGAGMY----- 298

Query: 382 EDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQVSCGFNHTGALL 427
                  GQLGHG + + I P  I+    +V   Q+SCG  HT AL+
Sbjct: 299 -------GQLGHGANSNEILPRQIIELMGSV-VTQISCGKRHTLALV 337



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 141/300 (47%), Gaps = 16/300 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D G+LG      R + +     +    K  ACG +H++ +   G ++  G N  GQL
Sbjct: 86  GNNDSGQLGHEKPTKRLQMI--PGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQL 143

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+   +  +  P  +  L    VVQI+ G  H+ A+T +GELY WG NS+GQLGLG+   
Sbjct: 144 GLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDV- 202

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K+   P  +  L+ I     A G   S+ V+  G V  WG    G+LG    S       
Sbjct: 203 KIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISD------ 256

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
              +Y P L+K L   KVK  A G   S  +  +G V+  G     ++     ++   P 
Sbjct: 257 ---KYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPR 313

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            I +L  S   ++ CG  HT  L  S G++Y WG   +G LG  +   + +P+ V GP+S
Sbjct: 314 QIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQMVLGPWS 373



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 140/305 (45%), Gaps = 34/305 (11%)

Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           S  K+  ++  T +     I  D  +Y WG    G+LGLG    + I +P +++      
Sbjct: 3   SAPKRLCIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATA 62

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            +Q A G   +V +T  G+V S G   SG+LGH + +  L           ++I  L+  
Sbjct: 63  VEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRL-----------QMIPGLDAF 111

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVC 295
             K AA G  HS  ++  G+++ +G  A  ++ L      A  P ++  L  S   ++ C
Sbjct: 112 IFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIAC 171

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           G  HT  LT+ GELY WGSN +G LG+G  + +   P+ + G  +  P       I  ++
Sbjct: 172 GKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITG-LATIP-------IAFIA 223

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           CG  H+  +S+   + +GWG    TF        GQLG  +  D   P ++    N K  
Sbjct: 224 CGGYHSIVVSKSGAV-FGWG--RNTF--------GQLGMNDISDKYVPCLLKTLRNAKVK 272

Query: 415 QVSCG 419
            V+CG
Sbjct: 273 YVACG 277


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 181/378 (47%), Gaps = 55/378 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 425

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V++I   
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM-LPVRVEGKLHKNFVEEI--- 590

Query: 350 IVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
               SCG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   
Sbjct: 591 ----SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEAL 634

Query: 409 ENVKALQVSCGFNHTGAL 426
           ++ +   V CG N T A+
Sbjct: 635 KDKQVRTVVCGINFTAAI 652



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 561

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D   SP  V     E+  D+   ++V   CG   TAAI
Sbjct: 622 TDDRSSPTLV-----EALKDKQVRTVV---CGINFTAAI 652



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           IP  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 300 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-------- 351

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +G+   +  L   GN      P  +
Sbjct: 352 -QPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVES----- 465

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 466 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 510

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         Q++CG   T AL
Sbjct: 511 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVAL 548



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP     V
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 419

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 420 SAI-------SCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVP 460

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 461 REVESLKGLRTVRAACGVWHTAAVVEVM 488


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 177/397 (44%), Gaps = 54/397 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P + S     S+  LACGGAH + LT  G V+  G    GQ
Sbjct: 20  WGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  + +  +L P  +S     V+ Q + G+ HS  ++  G ++  G  S GQLG G   
Sbjct: 80  LGHGDILNITL-PKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTL 138

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +  +  P KV   +    K  A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 139 S--LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD------- 189

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S   P ++  L+ V+V   +A   HSA I  +G+ + +G        F  G     P
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRG------FCGGPDVHAP 243

Query: 282 -SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ----- 335
            SL S L +  EV  G  H  +LT  GE++  GS  N             PE+ Q     
Sbjct: 244 QSLPSPLSF-REVAVGWNHALLLTVDGEVFKLGSTLN-----------KQPEKQQLQIDS 291

Query: 336 --GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
               F + P D     ++ ++ G +H+AA++E G++ TWGWG              GQLG
Sbjct: 292 SEALFEKVP-DFDGVKVMQIAAGAEHSAAVTENGEVKTWGWG------------EHGQLG 338

Query: 393 HGNDVDYIHPTIVNFGE---NVKALQVSCGFNHTGAL 426
            GN  D   P +V+ G      K ++V CG   T A+
Sbjct: 339 LGNTNDQTSPELVSLGSIDLRTKEIKVYCGSGFTYAV 375



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 20/235 (8%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           +++ WG  ++GQLG  K   +++P    +  L  I     A G    +A+T GGKV +WG
Sbjct: 16  QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSGGKVFTWG 73

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G SG+LGHG   +I           P+L+   +   +  AAAG+ HS  + ++G ++  
Sbjct: 74  RGSSGQLGHGDILNI---------TLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTC 124

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           G+ +  ++   +      P+ +S       + V CG  H+ VL +G ++  +GS + G L
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
           G  S  +    + V  P   S +  +   +V +S    H+AAIS +G+  +WG G
Sbjct: 185 GFSSDRI----KSVNLPCVVSGLKDV--EVVRISANGDHSAAISADGQFFSWGRG 233


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 183/377 (48%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACG  H   +T+ G V++ G    G+LG  +  ++   L P  + GLK   V+ ++
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDV---LHPKLVDGLKNTNVELVA 363

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +HS A+T+ G+LY WG +S+  G LG   +A+  +P   K+   L GI     + G 
Sbjct: 364 CGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVP--KKLNGPLEGIHVAAVSCGP 421

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+          TPR ++ L+G++   AA G
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRRSV---------STPREVESLKGLRTVRAACG 472

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P  
Sbjct: 473 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKESRLVPTCVAALVEPNF 530

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   T  LT+ G +YT GS   G LG    D    P RV+G  S++ V+++    
Sbjct: 531 CQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADG-KLPVRVEGKLSKNFVEEL---- 585

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
               CG  H A + S  ++ TWG G +            G+LGHG+  D   PTIV   +
Sbjct: 586 ---DCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTIVEALK 630

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   V CG + T A+
Sbjct: 631 DKQVKSVVCGTSFTAAI 647



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 157/362 (43%), Gaps = 63/362 (17%)

Query: 37  RRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
           RR AAL         WG    GRLG G       P +    +  +++ +ACG  H+  +T
Sbjct: 314 RRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVT 373

Query: 88  ETGCVYATG--LNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGE 143
            +G +Y  G   ++ G LG   N   +  P +++G  +   V  +S G  H++ +T  G+
Sbjct: 374 LSGDLYTWGGSSHNCGLLGY-RNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQ 432

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------- 193
           L+ +G  + G LG G +  + +  P +VE L G+ T +AA G   + AV           
Sbjct: 433 LFTFGDGTFGVLGHGDR--RSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 490

Query: 194 --GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
               GK+ +WG G  GRLGHG + S L          P  +  L        A G   + 
Sbjct: 491 NCSSGKLFTWGDGDKGRLGHGDKESRL---------VPTCVAALVEPNFCQVACGHSMTV 541

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTC 301
            +   G VY  G      +  Q GN    P    KLP          + EE+ CG YH  
Sbjct: 542 ALTTTGHVYTMGS----PVYGQLGN----PQADGKLPVRVEGKLSKNFVEELDCGAYHVA 593

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
           VLTS  E+YTWG   NG LG G  D   SP  V     E+  D+   S+V   CG   TA
Sbjct: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIV-----EALKDKQVKSVV---CGTSFTA 645

Query: 362 AI 363
           AI
Sbjct: 646 AI 647



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 140/321 (43%), Gaps = 57/321 (17%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-------IPTKVECLSGIFTKQAA 183
           G+  S A+   G++Y+WG+ + G +  G               +P  +E    +  +  A
Sbjct: 255 GHDDSDAL---GDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESAVLLDVQTIA 311

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   +  VT  G+V SWG    GRLGHG +S +L          P+L+  L+   V++ 
Sbjct: 312 CGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLH---------PKLVDGLKNTNVELV 362

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGY 298
           A G  HS  +  +G +Y +G  + +  L    N A    P  ++   +  +   V CG +
Sbjct: 363 ACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPW 422

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           HT V+TS G+L+T+G    G LG G    + +P  V+       +  + T  V  +CG  
Sbjct: 423 HTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVES------LKGLRT--VRAACGVW 474

Query: 359 HTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           HTAA+ E             GK+ TWG G              G+LGHG+    + PT V
Sbjct: 475 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGDKESRLVPTCV 522

Query: 406 NFGENVKALQVSCGFNHTGAL 426
                    QV+CG + T AL
Sbjct: 523 AALVEPNFCQVACGHSMTVAL 543



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 24/212 (11%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T  + P+ ++    + V+  A G  H+A + + G V+ +G+    ++     +    P L
Sbjct: 291 TDSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKL 350

Query: 284 ISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC--LGIGSIDVLHSPERVQGPFS 339
           +  L  +  E V CG YH+C +T  G+LYTWG + + C  LG  +      P+++ GP  
Sbjct: 351 VDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLE 410

Query: 340 ESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +  VSCG  HTA + S G++ T+G     GTF        G LGHG+   
Sbjct: 411 -------GIHVAAVSCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDRRS 451

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
              P  V   + ++ ++ +CG  HT A++E +
Sbjct: 452 VSTPREVESLKGLRTVRAACGVWHTAAVVEVM 483


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 172/395 (43%), Gaps = 50/395 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P + S     S+  LACGGAH + LT  G V+  G    GQ
Sbjct: 20  WGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQ 79

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  + +  +L P  +S     V+ Q + G+ HS  ++  G L+  G  S GQLG G   
Sbjct: 80  LGHGDILNITL-PKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNM 138

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +  +  P KV   S    K  A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 139 S--LRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDG------ 190

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            + S   P ++  L+ V+V   +A   HSA I  +G+ + +G        F  G   + P
Sbjct: 191 -TKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRG------FCAGPDVQTP 243

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +       +V  G  H  +LT  GE++  G+  N             PE+ Q     S
Sbjct: 244 QCLPSSLSFRKVAVGWNHALLLTVDGEVFKLGNTLN-----------KQPEKQQLQIDSS 292

Query: 342 PV------DQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                   D     ++ ++ G +H+AA++E GK+ TWGWG              GQLG G
Sbjct: 293 EALLAKVSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWG------------EHGQLGLG 340

Query: 395 NDVDYIHPTIVNFGE---NVKALQVSCGFNHTGAL 426
           N  D   P +V+ G      K ++V CG   T A+
Sbjct: 341 NTNDQTSPQLVSVGSIDLRTKEIKVYCGSGFTYAV 375



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 24/237 (10%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           +++ WG  ++GQLG  K   +++P    +  L  I     A G    +A+T  GKV +WG
Sbjct: 16  QVWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSDGKVFTWG 73

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G SG+LGHG   +I           P+L+   +G  +  AAAG+ HS  + ++G ++  
Sbjct: 74  RGSSGQLGHGDILNI---------TLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTC 124

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENG 318
           G+ +  ++   +    R P+ +S   +S E    V CG  H+ VL +G ++  +GS + G
Sbjct: 125 GNGSFGQLGHGDNMSLRTPAKVSY--FSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRG 182

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
            LG  S       + V  P   S +  +   +  +S    H+AAIS +G+  +WG G
Sbjct: 183 QLGFTS----DGTKSVNLPCVVSGLKDV--EVTRISANGDHSAAISADGQFFSWGRG 233



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 23/150 (15%)

Query: 281 PSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P L+S   LP    + CGG H   LTS G+++TWG   +G LG G I  +  P+ V   F
Sbjct: 39  PQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQLGHGDILNITLPKLVS--F 96

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +  V      I   + GW H+  +S+ G + T G    +G+F        GQLGHG+++
Sbjct: 97  FDGYV------ITQAAAGWSHSGFVSDSGCLFTCG----NGSF--------GQLGHGDNM 138

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALL 427
               P  V++  N     V+CG  H+  LL
Sbjct: 139 SLRTPAKVSYFSNESVKMVACGMRHSLVLL 168


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 155/326 (47%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P +     ++ +K +A   GG H L LT+ G +++ G  + G
Sbjct: 3312 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDG 3371

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   ++    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3372 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3430

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++   P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3431 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3483

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3484 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3539

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3540 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3599

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 3600 -LDDARVNR-------VSCGSSHSIA 3617



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 145/330 (43%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4377 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4436

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4437 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4488

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4489 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4545

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4546 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHAL 4605

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4606 QGK--------KITRVACGSAHTLAWSTMK 4627



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 176/395 (44%), Gaps = 48/395 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         PV+C +        L  G    L +T  G VYATG    G+
Sbjct: 4264 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4323

Query: 103  LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG G
Sbjct: 4324 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4381

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +   +   P  +E L G      A G   S A+T  G + +WG G  GRLGHG      
Sbjct: 4382 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4434

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  + TP+L++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     +
Sbjct: 4435 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4490

Query: 277  HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +V
Sbjct: 4491 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4550

Query: 335  ---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
               QG             I+ ++ G  H  A ++ G++ TW            G +  GQ
Sbjct: 4551 AALQG-----------KKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQ 4587

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            LG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4588 LGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4622



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 192/395 (48%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + PV      K  LK +   GG+ TLF+ ++ G +YA G  
Sbjct: 3258 VWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKLYACGEG 3314

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+ ++     EP  I  L + +++   + +G  H+ A+T DG+++ WG+  +G+L
Sbjct: 3315 TNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKL 3373

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3374 GHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGD-- 3429

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L++ L G +V   A G     +  +  +G VY +GD    K+   
Sbjct: 3430 -------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3482

Query: 274  EGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3483 GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3542

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              V+G   +         +V V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3543 TLVEGLRGKK--------VVHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQ 3582

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G+G+ +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3583 QGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3617



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 64/357 (17%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQ----------E 3305

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +   +  P  +  LS    K+ A+  G + ++A+T  GK+ 
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSN--VCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIF 3363

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 3364 SWGEGEDGKLGHGN---------SVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3414

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      +V CG     T  LT+ G +Y+WG  
Sbjct: 3415 YTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3474

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTW 371
            + G LG G  D  ++P   +R+ G             +V + CG + + A+++ G++ TW
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNG-----------LGVVQIECGAQFSLALTKYGEVWTW 3523

Query: 372  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G G               +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3524 GKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3568



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 153/344 (44%), Gaps = 38/344 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4317

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 4318 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4375

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4376 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P L+  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4427 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4486

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            G  D    P +++              ++ V CG + + A++  G I TWG G  H    
Sbjct: 4487 GGSDGCKIPMKIESLAG--------LGVIKVECGSQFSVALTRSGAIYTWGKGDYH---- 4534

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                    +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4535 --------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4570



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 114/244 (46%), Gaps = 17/244 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
           G H L LT+   VY+ G  D G+LG  + + Y  EP  +  L  K +  I+ G  +S+ +
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYD-EPKLVEALVDKNITFIACGSTYSAVL 564

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
           + +GELY WG+ + G+LG G   +  + IPT V  L+G      A G    Q++ VT  G
Sbjct: 565 SSNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASG 622

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V SWG G  G+LG G               TP+++ +L  + V     G   SA +   
Sbjct: 623 IVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY 673

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           G VY +G     ++      H R P +I  L     +E+  G +H   LT    +Y WG 
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGR 733

Query: 315 NENG 318
           N+ G
Sbjct: 734 NDYG 737



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 139/314 (44%), Gaps = 39/314 (12%)

Query: 124  EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            E+VQ      H S        +Y+WG N   QLG G K +K I +P   E LS +     
Sbjct: 3235 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3292

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G +S++           P+LI  L    +K 
Sbjct: 3293 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3343

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
             A  +G  H+  + ++G+++ +G+    K+         +P LI  L      ++ CG  
Sbjct: 3344 VAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3403

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            H+  +TS GELYTWG  E G LG G       P+ VQ    +         ++ V+CG +
Sbjct: 3404 HSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQ--------RVIQVACGSR 3455

Query: 359  HT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
                 A  ++G + +WG     G F        G+LG G       P +++    +  +Q
Sbjct: 3456 DAQTMALTADGSVYSWG----DGDF--------GKLGRGGSDGCYTPLLIDRLNGLGVVQ 3503

Query: 416  VSCGFNHTGALLEY 429
            + CG   + AL +Y
Sbjct: 3504 IECGAQFSLALTKY 3517



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 137/320 (42%), Gaps = 38/320 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P  C A  +  +K L C     + L+ +G VY        Q            P R+ G 
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 492

Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            ++ V +   +    H  A+T D  +Y WG    G+LG G +       P  VE L    
Sbjct: 493 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 550

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               A G   S  ++  G++ +WG G  GRLGHG   ++L          P L+  L G 
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 601

Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
            V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      +V 
Sbjct: 602 MVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 661

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CGG  +  LT+ GE+YTWG  E   LG G+ + +  P+ ++       V ++C       
Sbjct: 662 CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV-LKPKKVKELCV------ 714

Query: 355 CGWKHTAAISEGKILTWGWG 374
            G  H  A++E + L +GWG
Sbjct: 715 -GNFHVLALTEDQ-LVYGWG 732



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 19/250 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G       P +  A    ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 521 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 580

Query: 103 L--GISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           L  G S+N+   L P  ++ L   +   V   +G   +  +T  G ++ WG  + G+LG 
Sbjct: 581 LGHGNSDNV---LIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 637

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G         P  V+ L  I   +   G + S A+T  G+V +WG G   RLGHG E  I
Sbjct: 638 G--GCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHI 695

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                      P++I+ L+  KVK    G  H   + E+  VY +G     ++    G  
Sbjct: 696 ---------RYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTI 746

Query: 278 ARRPSLISKL 287
              P+L   L
Sbjct: 747 VPEPTLCPTL 756



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG                P+L++ L    +   A G  +
Sbjct: 510 LALTQDSSVYSWGNGDGGRLGHGDR---------VWYDEPKLVEALVDKNITFIACGSTY 560

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     ++   P+L++ L       V CG     T  +T+
Sbjct: 561 SAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTA 620

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G +++WG    G LG G  D   +P+ V              ++  V CG + +AA++ 
Sbjct: 621 SGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLD--------INVAKVYCGGQFSAALTA 672

Query: 366 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G             G +LGHGN+    +P ++   +  K  ++  G  H  
Sbjct: 673 YGEVYTWGKG------------EGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVL 720

Query: 425 ALLE 428
           AL E
Sbjct: 721 ALTE 724



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+YG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  +  +
Sbjct: 627 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 686

Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    E+I Y   P  I  LK K+V ++  G  H  A+T D  +Y WG+N  GQ  +  
Sbjct: 687 LGHGNEEHIRY---PKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 741

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
               ++P PT    LSG      A G  QS A
Sbjct: 742 ALGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 21/156 (13%)

Query: 274  EGNHARRPSLISKLPYSEEV-VCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EG   + P L   L     V + GG  T + +T+ G++Y  G    G LGIG  D +  P
Sbjct: 4276 EGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVP 4335

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
              ++       +  +    V V+ G KH  A+S EG + +WG G              G+
Sbjct: 4336 TLLES------IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD------------GK 4377

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            LGHGN + Y  P ++      + + ++CG +H+ A+
Sbjct: 4378 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4413



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 23/140 (16%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           + CG  ++ VL+S GELYTWG    G LG G+ D +  P  V               +V 
Sbjct: 554 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGH--------MVVY 605

Query: 353 VSCGWKHTAAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
           V+CG   +  +   + G + +WG G              G+LG G       P IV+   
Sbjct: 606 VACGSGDSQTLCVTASGIVFSWGDGNY------------GKLGRGGCDGSKTPKIVDKLL 653

Query: 410 NVKALQVSCGFNHTGALLEY 429
           ++   +V CG   + AL  Y
Sbjct: 654 DINVAKVYCGGQFSAALTAY 673


>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
           niloticus]
          Length = 1384

 Score =  126 bits (317), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 162/348 (46%), Gaps = 48/348 (13%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG ++      FG+   + N+     P +          +S G  HS+ IT +G L 
Sbjct: 9   IPETGAIFT-----FGRTSFANNV-----PSKFWLKNDHPKHMSCGGEHSAVITENGRLL 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGL  K +     PT V+ L     K AA G + ++  T  G V S G+  
Sbjct: 59  MFGGNTWGQLGLRIKPSA--RKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQ 116

Query: 206 SGR--LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G+  LGH  +S+    LR   ++ P          +K+ +AG   SA + E+GR++++G
Sbjct: 117 DGQLGLGHCDKSTYFHLLRPFCDWAP----------IKMLSAGCNTSAALTEDGRLFMWG 166

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +V ++ F +   A  P  +        V CG  H+  +T  G LYT+G + NG LG+ 
Sbjct: 167 DNSVGQIAFGDEGFAAEPREVHVGEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQ 226

Query: 324 SIDVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
              + +   P++VQG      V ++C       CG +HT  ++E  + T+G G       
Sbjct: 227 KEQLANHRVPQQVQGVLGH--VTRVC-------CGGEHTVVLTEKNVYTFGRG------- 270

Query: 382 EDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 428
                  GQLGHG  +  +H P  +    N K   ++CG NHT  + +
Sbjct: 271 -----QYGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVVTD 313



 Score =  119 bits (297), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 106/354 (29%), Positives = 157/354 (44%), Gaps = 36/354 (10%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
           K ++CGG H+  +TE G +   G N +GQLG+      + +P  +  LK E V+++  G 
Sbjct: 39  KHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPS-ARKPTSVKALKSEKVKLAACGR 97

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+   T  G +Y  G N +GQLGLG           +  C      K  + G   S A+
Sbjct: 98  DHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFC-DWAPIKMLSAGCNTSAAL 156

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++  WG    G++  G E    GF        PR +    G  V   + G+ HSA 
Sbjct: 157 TEDGRLFMWGDNSVGQIAFGDE----GFAAE-----PREVH--VGEAVIWVSCGYKHSAF 205

Query: 253 IDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           +   GR+Y FG+ A  ++  Q+    NH     +   L +   V CGG HT VLT    +
Sbjct: 206 VTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLGHVTRVCCGGEHTVVLTE-KNV 264

Query: 310 YTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
           YT+G  + G LG G+ +  +H P+ +Q  F  S V  I       +CG  HTA +++  +
Sbjct: 265 YTFGRGQYGQLGHGTFLFEVHLPKALQH-FCNSKVRHI-------ACGENHTAVVTDSGL 316

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           L     G HG            LG  N ++   PT+           VSCG +H
Sbjct: 317 LYTFGDGRHGKLG---------LGEENFINQFSPTLCTRFLQYAVQSVSCGGHH 361



 Score =  105 bits (262), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 150/336 (44%), Gaps = 41/336 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G   +G+LGL    S  +P    A +   +K  ACG  HT+  T  G VY+ G N  G
Sbjct: 59  MFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQDG 118

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+   +       LR       +  +S G + S+A+T DG L+MWG NS GQ+  G +
Sbjct: 119 QLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNSVGQIAFGDE 178

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                P    V    G      + G++ S  VT  G++ ++G   +GRLG  +E      
Sbjct: 179 GFAAEPREVHV----GEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKE------ 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
            +  +   P+ ++ + G   ++   G  H+  + E   VY FG     ++     LF+  
Sbjct: 229 -QLANHRVPQQVQGVLGHVTRVCCGG-EHTVVLTEKN-VYTFGRGQYGQLGHGTFLFE-- 283

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                P  +     S+   + CG  HT V+T  G LYT+G   +G LG+G  + ++    
Sbjct: 284 --VHLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQ--- 338

Query: 334 VQGPFSESPVDQICT-----SIVLVSCGWKHTAAIS 364
               FS +    +CT     ++  VSCG  H   ++
Sbjct: 339 ----FSPT----LCTRFLQYAVQSVSCGGHHMLVLA 366



 Score =  103 bits (257), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 141/267 (52%), Gaps = 17/267 (6%)

Query: 44  GNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G+   G+LGLG  + S +  ++    +   +K L+ G   +  LTE G ++  G N  GQ
Sbjct: 113 GSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNSVGQ 172

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +   +  G++ EP  +  + + V+ +S GY HS+ +TV G LY +G+++NG+LGL K+  
Sbjct: 173 IAFGDE-GFAAEPREVH-VGEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQL 230

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V+ + G  T+    G E +V +T    V ++G G  G+LGHG       FL 
Sbjct: 231 ANHRVPQQVQGVLGHVTR-VCCGGEHTVVLTEK-NVYTFGRGQYGQLGHGT------FLF 282

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               + P+ ++     KV+  A G  H+A + ++G +Y FGD    K+   E N   +  
Sbjct: 283 EV--HLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFS 340

Query: 281 PSLISK-LPYS-EEVVCGGYHTCVLTS 305
           P+L ++ L Y+ + V CGG+H  VL +
Sbjct: 341 PTLCTRFLQYAVQSVSCGGHHMLVLAT 367


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4075 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4132

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +S+ P  +  L+   V+   +++G  H  A+T DGE+Y WG+  +G+LG 
Sbjct: 4133 GRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4191

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4192 GNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4245

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4246 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4295

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4296 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4353

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4354 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDAGEVYTW----------- 4391

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 4392 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4434



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 143/324 (44%), Gaps = 23/324 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT  G V++ G  + G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG         +P  +  L+ K++  I+ G  HS+AI+  GELY WG    G+LG G  
Sbjct: 3030 KLGHGNRTTLD-KPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3088

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A ++ P      C S +          Q++A+T  G V SWG G  G+LG G        
Sbjct: 3089 ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG------- 3141

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              S    TP  I+ L G+ V     G   S  +   G V+ +G     ++      H R+
Sbjct: 3142 --SEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK 3199

Query: 281  PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P  I+ L       V  G  H   +T  G++Y WG N++G  G G+  V   P  V G  
Sbjct: 3200 PQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-- 3257

Query: 339  SESPVDQICTSIVLVSCGWKHTAA 362
                +D +  +   V+CG  H+ A
Sbjct: 3258 ----LDAVFVN--RVACGSSHSMA 3275



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3023 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3082

Query: 103  LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L    V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3083 LGHGDN-ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3141

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3142 SEGSA--TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3197

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3198 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3248

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3249 NKKPALVIGLDAVFVNRVACGSSHS 3273



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 135/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4161 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMS--VADIACGS 4218

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4219 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4276

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4277 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4327

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4328 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4387

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 4388 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 4436

Query: 366  GKI 368
             ++
Sbjct: 4437 SQL 4439



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 159/358 (44%), Gaps = 66/358 (18%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V   GLND  QLG            S+ I   L P+ I+G  K +  +S           
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFVVSQ---------- 2962

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            DG+++  G+ +NG+LGLG      +P+P ++  L     K+ A+  G + ++A+T  GKV
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  +++           PRL++ L   K++  A G  HSA I   G 
Sbjct: 3021 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3071

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   +     +P L++ L  S   +V CG     T  LT  G +++WG 
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGD 3131

Query: 315  NENGCLGIGSID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILT 370
             + G LG G  +     H  ER+ G             +V + CG + + A++  G++ T
Sbjct: 3132 GDFGKLGRGGSEGSATPHEIERLSG-----------IGVVQIECGAQFSLALTRAGEVWT 3180

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            WG G  +            +LGHG D     P  +      + + V+ G  H  A+ +
Sbjct: 3181 WGKGDYY------------RLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTD 3226



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G V+A G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 2952 GGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3010

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 3011 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3068

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  ++         +  P+L+  L G +V   A G     +  
Sbjct: 3069 QGELYTWGLGEYGRLGHGDNAT---------QLKPKLVTALCGSRVIQVACGSRDAQTLA 3119

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3120 LTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3179

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 3180 TWGKGDYYRLGHGGDQHVRKPQPIAGLRGRR--------VIHVAVGALHCLAVTDAGQVY 3231

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3232 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4181 WGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4240

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4241 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4298

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4299 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4355

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G VY +GD    ++        +
Sbjct: 4356 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4408

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4409 RPRLVAALQGKHIVKVTCGSAHTLALST 4436



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 138/327 (42%), Gaps = 45/327 (13%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S  RP       K  +K +AC     L L++ G +Y   ++               +PL 
Sbjct: 582 STQRPPPALLNCKFHVKQVACSKDIVLLLSKEGKLYNWHIS---------KPDTEPQPLD 632

Query: 118 ISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
              +  E   IS   H    H  A+  +   Y WG   N +LG G   ++   +PTK+E 
Sbjct: 633 FGDIGSETF-ISIASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSR--ELPTKIES 689

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L     K    G   S A+T  G + +WG G  GRLGHG          S  +  P ++ 
Sbjct: 690 LVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGI---------SDDQCLPTMVM 739

Query: 234 ELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            L+  +V   A  +G  H+ C+   G VY +GD    K+     N + +P LI  LP  +
Sbjct: 740 ALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ 799

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-- 349
            V  G   +  LT  G+LY+WG  +  CLG   ++       VQG      V ++ TS  
Sbjct: 800 RVFAGSQFSLALTGEGQLYSWG--KASCLGHQLVE-----RNVQG----CSVPRLITSLQ 848

Query: 350 ---IVLVSCGWKHTAAISE-GKILTWG 372
              IV V+ G  H  A+S  G+I  WG
Sbjct: 849 HKRIVDVAVGVTHCLALSSAGEIFGWG 875



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G  + +  P +  A + H +   AL  G AHTL LT  G VYA G  D+
Sbjct: 716 WGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY 775

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + +   SL+PL I  L + V ++  G   S A+T +G+LY WGK S     L ++
Sbjct: 776 GKLG-NASCNSSLQPLLIECLPR-VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVER 833

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +   +P  +  L        A+G    +A++  G++  WG   + ++
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 23/269 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           C G H L +      Y+ G  D  +LG  +     L P +I  L + V  +  G  +S+A
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSREL-PTKIESLVRRVKSVYCGCSYSAA 706

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT+ G LY WG+ + G+LG G    + +P  T V  L        ALG     ++ +T  
Sbjct: 707 ITLRGNLYTWGRGNYGRLGHGISDDQCLP--TMVMALKDHQVVDVALGSGDAHTLCLTNE 764

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG G  G+LG+   +S L  L    E  PR+ +   G +  +A  G         
Sbjct: 765 GLVYAWGDGDYGKLGNASCNSSLQPL--LIECLPRVQRVFAGSQFSLALTG--------- 813

Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            G++Y +G  +    +++ +       P LI+ L +    +V  G  H   L+S GE++ 
Sbjct: 814 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFG 873

Query: 312 WGSNENGCLGIGSI---DVLHSPERVQGP 337
           WG N+N  +   S+    +L  P  V  P
Sbjct: 874 WGRNDNQQICPASVCSEPLLRQPILVTLP 902



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 22/227 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG G   SR  P    +  +  +K++ CG +++  +T  G +Y  G  ++G+
Sbjct: 665 WGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGCSYSAAITLRGNLYTWGRGNYGR 723

Query: 103 L--GISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
           L  GIS++      P  +  LK  +VV ++  +G  H+  +T +G +Y WG    G+LG 
Sbjct: 724 LGHGISDD---QCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESS 216
               + + P+   +ECL  +  ++   G + S+A+TG G++ SWG      LGH   E +
Sbjct: 781 ASCNSSLQPL--LIECLPRV--QRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERN 834

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           + G         PRLI  L+  ++   A G  H   +   G ++ +G
Sbjct: 835 VQGC------SVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWG 875



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 22/126 (17%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   + +    Y+WG+ +N  LG G       P ++     ES V ++ +    V 
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKI-----ESLVRRVKS----VY 698

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  ++AAI+  G + TWG G              G+LGHG   D   PT+V   ++ + 
Sbjct: 699 CGCSYSAAITLRGNLYTWGRGNY------------GRLGHGISDDQCLPTMVMALKDHQV 746

Query: 414 LQVSCG 419
           + V+ G
Sbjct: 747 VDVALG 752


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 45/387 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ +YG+           PV     E  ++ A+A G   +L +   G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LGI   +  S  P+++ GLK +VV +S G +HS A+  DG ++ WG N +G+LG     
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              + +P +V+ LS +    A  GF  S+A+   G V  WG G   + G    S      
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                Y P  I+ L   KV   AAG+ HS  + ++G V+++G  +   +    G H+  P
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLP 335

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L     V  G  H+  LT  G ++ WG+N  G LG           R    FS +
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLG-----------RENNSFSLN 384

Query: 342 PVDQI--CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
              ++    ++V ++ G  HT AI     + W WG ++           GQLG+G     
Sbjct: 385 LPYKVKWLDNVVAIAAGGSHTLAIKRDGTV-WSWGANN----------KGQLGNGTYKSS 433

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             PT V  G N KA+ V  G  H+ A+
Sbjct: 434 YIPTCVK-GLN-KAVLVEAGSQHSLAV 458



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 189/432 (43%), Gaps = 84/432 (19%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+  YG LG    E  + PV     +  ++ A+A G  H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLPVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372

Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  EN  +SL  P ++  L   VV I+ G  H+ AI  DG ++ WG N+ GQLG G  
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTY 430

Query: 161 AAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWG--------------- 202
            +  IP      C+ G+   +A L   G + S+AV   G V  WG               
Sbjct: 431 KSSYIP-----TCVKGL--NKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDIL 483

Query: 203 ----------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELE 236
                           AGG   +          G G +     F  S+     +LI+ L+
Sbjct: 484 SPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LD 542

Query: 237 GVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
            +K V+  AAG+ HS  +  +G V+ +GD  +D    +  N + +P  I  L    +V  
Sbjct: 543 NIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKE-KYLNFSEKPVKIKGLSGVVKVAA 601

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           G YH+  L   G +++WG N  G LG G+ +    P RV+G            ++V ++ 
Sbjct: 602 GKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKG----------LNNVVAIAA 651

Query: 356 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H+ A+  +G +  W            G +  GQLG  N      P  V   +NV A 
Sbjct: 652 GDYHSMALKKDGTVWVW------------GSNIRGQLGRRNIEFSTVPLKVEKLDNVVA- 698

Query: 415 QVSCGFNHTGAL 426
            ++ G  H+ AL
Sbjct: 699 -IAAGDTHSVAL 709



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 187/388 (48%), Gaps = 49/388 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+ +    PV     +   + A++ G  H+L L + G V+  G  ++GQ
Sbjct: 66  WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
                   ++  P+++  L K +V I+ G+  S A+  DG ++ WG N++G+LG+G  + 
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K   +P KV+ L  +    A  G   S+A+   G V SWG    G LG+          R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227

Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            T +YT   P  +K L  V + I+A GF HS  ++++G V+I+G   ++K    + +++ 
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  I  L     +  G  H+  L   G ++ WG N  G LG    +    P +V+G   
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKG--- 340

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    ++V V+ G  H+ A+++   + W W          G+++ GQLG  N+   
Sbjct: 341 -------LKNVVAVAAGRLHSVALTKNGTI-WAW----------GNNAFGQLGRENNSFS 382

Query: 400 IH-PTIVNFGENVKALQVSCGFNHTGAL 426
           ++ P  V + +NV A  ++ G +HT A+
Sbjct: 383 LNLPYKVKWLDNVVA--IAAGGSHTLAI 408



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 25/206 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           +++++A G  H+L +   G V++ G  D       + + +S +P++I GL   VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKEKYLNFSEKPVKIKGLSG-VVKVAAG 602

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            +HS A+  DG ++ WG N+ GQLG G +    +P+  +V+ L+ +     A G   S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
           +   G V  WG+   G+LG           R   E++  P  +++L+ V V I AAG  H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705

Query: 250 SACIDENGRVYIFG---DRAVDKMLF 272
           S  + ++G V+++G   DR + K + 
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEIL 731



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 137/314 (43%), Gaps = 42/314 (13%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
            + G   +V+    G  H+ AI  DG ++ WG N  GQLG G      IP+  +V+ L  
Sbjct: 36  ELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKD 93

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
           +    A  G   S+A+   G V  W     G   +GQ  S     R  +  TP  +KEL+
Sbjct: 94  VVAVSA--GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELK 142

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
            + V I AAG+  S  +  +G V+ +G     ++       +  P  +  L     V  G
Sbjct: 143 NI-VAI-AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAG 200

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQICTSIVLVS 354
            YH+  L   G +++WG NE+G LG    +   +  P RV+G           + ++ +S
Sbjct: 201 LYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKG----------LSDVIAIS 250

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            G  H+ A+++   + W WGG  G   ++G           D  YI P  + +    K +
Sbjct: 251 AGGFHSIALNKDGAV-WIWGG--GIIEKNGKI---------DNSYI-PVRIRWLN--KVV 295

Query: 415 QVSCGFNHTGALLE 428
            ++ G+ H+ AL +
Sbjct: 296 AIAAGYRHSIALKD 309



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+ E+ + PV       +++ A+A G  H++ L + G V+  G N  GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   NI +S  PL++  L   VV I+ G  HS A+  DG +++WG   +  L     ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733

Query: 163 KVIPIPTK 170
             IP+  K
Sbjct: 734 SSIPVQIK 741


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 177/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G VY+ G    G+LG   +     +P  I  L    ++ ++ G
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLIDALAHMNIELVACG 371

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVE-CLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG N     GL     +V   +P ++   L GI     + G   +
Sbjct: 372 EYHTCAVTLSGDLYTWG-NGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQSI---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKETRLVPTCVASLVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS+  G LG    D +  P RV+G   ++ V++I       
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEI------- 591

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQ 639

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 155/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G  G    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLSGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRQS--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKETRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 622

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  +SP  V     E+  D+   S+V   CG   TAAI
Sbjct: 623 TDDRNSPTLV-----EALKDKQVRSVV---CGINFTAAI 653



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 132/314 (42%), Gaps = 61/314 (19%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++++WG+ +        N +LG    A     +P  +E    +  +  + G   +  VT
Sbjct: 268 GDVFIWGEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVT 327

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG    GRLGHG +  +           P+LI  L  + +++ A G  H+  +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLIDALAHMNIELVACGEYHTCAV 378

Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G+   +  L   GN   H     L   L   +   + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438

Query: 309 LYTWGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
           L+T+G    G LG G   SI V    E ++G              V  +CG  HTAA+ E
Sbjct: 439 LFTFGDGSFGVLGHGDRQSISVPREVESLKG-----------LRTVRAACGVWHTAAVVE 487

Query: 366 -------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
                        GKI TWG G              G+LGHG+    + PT V       
Sbjct: 488 VMVGNSSSSNCSSGKIFTWGDGDK------------GRLGHGDKETRLVPTCVASLVEPN 535

Query: 413 ALQVSCGFNHTGAL 426
             QV+CG   T AL
Sbjct: 536 FCQVACGHCFTVAL 549



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G VY +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG----SIDVLH-SPERVQGPFSES 341
           +   E V CG YHTC +T  G+LYTWG   NG    G      +V H  P+R+ GP    
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFGLSGHGNEVSHWMPKRLNGPLEGI 418

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
            V  I       SCG  HTA + S G++ T+G G            S G LGHG+     
Sbjct: 419 HVSSI-------SCGPWHTAVVTSAGQLFTFGDG------------SFGVLGHGDRQSIS 459

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLEYV 430
            P  V   + ++ ++ +CG  HT A++E +
Sbjct: 460 VPREVESLKGLRTVRAACGVWHTAAVVEVM 489


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 181/378 (47%), Gaps = 55/378 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 355 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 413

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 414 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 471

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 472 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 522

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 523 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 580

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V++I   
Sbjct: 581 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEI--- 636

Query: 350 IVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
               SCG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   
Sbjct: 637 ----SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEAL 680

Query: 409 ENVKALQVSCGFNHTGAL 426
           ++ +   V CG N T A+
Sbjct: 681 KDKQVRTVVCGINFTAAI 698



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 380 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 439

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 440 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 498

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 499 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 556

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 557 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 607

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 608 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 667

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D   SP  V     E+  D+   ++V   CG   TAAI
Sbjct: 668 TDDRSSPTLV-----EALKDKQVRTVV---CGINFTAAI 698



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           IP  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 346 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 396

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +G+   +  L   GN      P  +
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 456

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 457 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVES----- 511

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 512 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 556

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         Q++CG   T AL
Sbjct: 557 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVAL 594



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP     V
Sbjct: 407 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 465

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 466 SAI-------SCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVP 506

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 507 REVESLKGLRTVRAACGVWHTAAVVEVM 534


>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 551

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 167/391 (42%), Gaps = 40/391 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+ G G+  S   PV        ++ A+A    H+L LT  G V A G N FGQ
Sbjct: 60  WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQ 119

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG           P+R+  +   V  I+ G  HS AIT  G ++ WG N+ GQLG G   
Sbjct: 120 LGDGTTASSRTPVPVRLP-VGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTT 178

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +P+P ++    G      A G   S+AV   G  L+WG+   G+LG G         
Sbjct: 179 DSSLPVPVRLPV--GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGT-------- 228

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T   TP  + +L    V   AAG +HS  +   G VY +G  +  ++     + +  P
Sbjct: 229 -TTGSSTPITVPQLP--TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTP 285

Query: 282 SLISKLP---YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + ++P    +  VV G  H+  LT+ G    WG N  G LG G+     +P  V+ P 
Sbjct: 286 IAV-RVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPG 344

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                     ++  V+    H  A+ S    L W              ++ GQLG+G   
Sbjct: 345 GA--------TLTAVAIHRDHAVAVTSTATALAW------------SRNNEGQLGNGTTT 384

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           D   P  V+         V+ G +H+ AL++
Sbjct: 385 DSSEPVAVSLPAGTAITAVAVGDDHSLALVD 415



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 106/250 (42%), Gaps = 13/250 (5%)

Query: 89  TGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           T  + A G N FGQ G           P+R+  +   V  I+    HS A+T  G +  W
Sbjct: 54  TDTILAWGDNSFGQFGNGTTASSRTPVPVRLP-VGTTVTAIAGSDTHSLALTSVGTVLAW 112

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G NS GQLG G  A+   P+P ++    G      A G   S+A+T  G V +WG    G
Sbjct: 113 GGNSFGQLGDGTTASSRTPVPVRLPV--GTTVTAIAAGTSHSLAITATGAVFAWGDNAVG 170

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G          +T    P  ++   G  V   A G  HS  +   G    +G  A 
Sbjct: 171 QLGDGT---------TTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAF 221

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++       +  P  + +LP    V  G  H+  LTS G +Y WG+N  G LG GS   
Sbjct: 222 GQLGDGTTTGSSTPITVPQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSD 281

Query: 328 LHSPERVQGP 337
             +P  V+ P
Sbjct: 282 SSTPIAVRVP 291



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 136/335 (40%), Gaps = 39/335 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+  S   PV        ++ A+A G +H+L +T TG V+A G N  GQ
Sbjct: 112 WGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQ 171

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       SL  P+R+  +   V  I+ G  HS A+   G    WG N+ GQLG G   
Sbjct: 172 LGDGTTTDSSLPVPVRLP-VGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTT 230

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               PI   V  L  +     A G   S+A+T  G V +WGA   G+LG G  S      
Sbjct: 231 GSSTPI--TVPQLPTV--TAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTS------ 280

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 TP  ++   G       +G  HS  +   G    +GD    ++    GN A   
Sbjct: 281 ---DSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQL----GNGA--- 330

Query: 282 SLISKLPYSEEVVCGGY---------HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           ++ S  P +  V  G           H   +TS      W  N  G LG G+      P 
Sbjct: 331 TVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPV 390

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
            V  P          T+I  V+ G  H+ A+ + +
Sbjct: 391 AVSLPAG--------TAITAVAVGDDHSLALVDAQ 417



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 122/292 (41%), Gaps = 39/292 (13%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           ++A+  D  +  WG NS GQ G G  A+   P+P ++    G      A     S+A+T 
Sbjct: 49  TAAVATD-TILAWGDNSFGQFGNGTTASSRTPVPVRLPV--GTTVTAIAGSDTHSLALTS 105

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G VL+WG    G+LG G  +         S  TP  ++   G  V   AAG  HS  I 
Sbjct: 106 VGTVLAWGGNSFGQLGDGTTA---------SSRTPVPVRLPVGTTVTAIAAGTSHSLAIT 156

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVLTSGGELYT 311
             G V+ +GD AV ++       +  P  + +LP    V  + GG  H+  + S G    
Sbjct: 157 ATGAVFAWGDNAVGQLGDGTTTDSSLPVPV-RLPVGTTVTAIAGGLGHSLAVASTGATLA 215

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           WGSN  G LG G+     +P  V          Q+ T +  V+ G  H+ A+ S G +  
Sbjct: 216 WGSNAFGQLGDGTTTGSSTPITVP---------QLPT-VTAVAAGDVHSLALTSTGTVYA 265

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           W            G +S GQLG G+  D   P  V       A  V  G +H
Sbjct: 266 W------------GANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADH 305


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 155/347 (44%), Gaps = 54/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 334 WGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV------------TGGGKVLSWGAGGS 206
            +  K I +P +VE L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 453 DR--KSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +     +G VY  G   
Sbjct: 511 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGS-- 559

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 560 --PVYGQLGN----PLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 613

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG G  D  +SP  V     E+  D+   SI   +CG   TAAI
Sbjct: 614 NGRLGHGDTDDRNSPSLV-----EALKDKQVKSI---ACGTSFTAAI 652



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 181/377 (48%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   + P  I  L    ++ ++
Sbjct: 312 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV---MHPKLIDALSNTNIELVA 368

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 369 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 426

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   SI           P+ ++ L+G++   AA G
Sbjct: 427 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSI---------SLPKEVESLKGLRTVQAACG 477

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 478 VWHTAAVIEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNF 535

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   T   T+ G +YT GS   G LG    D    P RV+G  S+S V++I    
Sbjct: 536 CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADG-KLPTRVEGKLSKSFVEEI---- 590

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S+ ++ TWG G +            G+LGHG+  D   P++V   +
Sbjct: 591 ---ACGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRNSPSLVEALK 635

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   ++CG + T A+
Sbjct: 636 DKQVKSIACGTSFTAAI 652



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 31/269 (11%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
            P  +E    +  +  A G + +  VT  G++ SWG    GRLGHG +S ++        
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM-------- 351

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 352 -HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 410

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P+ V+      
Sbjct: 411 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLR 470

Query: 342 PVDQIC-----TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            V   C      +++ V  G   ++  S GK+ TWG G              G+LGHG+ 
Sbjct: 471 TVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGDK 518

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGA 425
              + PT V         QV+CG + T A
Sbjct: 519 EAKLVPTCVAALVEPNFCQVACGHSLTVA 547



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 361 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 419

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G     GTF        G LGHG+      P
Sbjct: 420 SSI-------SCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSISLP 460

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ +Q +CG  HT A++E +
Sbjct: 461 KEVESLKGLRTVQAACGVWHTAAVIEVM 488



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 13/90 (14%)

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
           F ++    +   +  ++CG +H A ++ +G+I +WG              SGG+LGHG D
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWG------------EESGGRLGHGVD 347

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            D +HP +++   N     V+CG  HT A+
Sbjct: 348 SDVMHPKLIDALSNTNIELVACGEYHTCAV 377


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 175/371 (47%), Gaps = 41/371 (11%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G  G  S        P       + S+K +ACGG H++FL E G VY  G+N  
Sbjct: 63  WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E  G   +P +I  L  + ++ ++ G  HS A++  G L+ WG  S+GQLGL  
Sbjct: 123 GQLG-HEKEGS--KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTT 179

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               V  +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 180 TEDSVA-VPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFP--- 235

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G     ++   +     
Sbjct: 236 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRE 290

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  +++VV   CG  HT VLT  G ++T+G+   G LG  S +   +P RV  
Sbjct: 291 SPCHV-KLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRV-- 347

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + + +  ++CG +HT A   S G I  +G G              GQLG G
Sbjct: 348 ------LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG------------IKGQLGSG 389

Query: 395 NDVDYIHPTIV 405
           +  +   P+ V
Sbjct: 390 HTCNLKCPSPV 400



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 133/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG++        P  I  
Sbjct: 133 KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKK 192

Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L +E++ Q+S G  H  A+  DG+ + WG+NS+GQLGLGK+       P +V+ L GI  
Sbjct: 193 LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQAS-PQRVKSLDGIPL 251

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   SG+LG   E             +P  +K L   K
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ---------DRESPCHVKLLRTQK 302

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + + G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 303 VVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGR 362

Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT   + S G +Y +G    G LG G    L  P  V+G
Sbjct: 363 QHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKG 402



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 44/337 (13%)

Query: 100 FGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           FG  G S  +   +   R SG   ++ V +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 68  FGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH 127

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            K+ +K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 128 EKEGSK----PEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLG------- 176

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLIK+L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 177 ---LTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKE 233

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N +G LG+       SP
Sbjct: 234 FPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESP 292

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+   ++         +V +SCG  HTA +++ G + T+G G            S GQ
Sbjct: 293 CHVKLLRTQK--------VVYISCGSDHTAVLTKTGGVFTFGAG------------SCGQ 332

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           LGH +  D ++P  V      +  Q++CG  HT A +
Sbjct: 333 LGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFV 369



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 36/289 (12%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++  WG  S G  G       +I  P     +     K+ A G   S+ +   G+V + G
Sbjct: 59  KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
               G+LGH +E S            P  I  L    +   A G  HS  + + GR++ +
Sbjct: 119 VNTKGQLGHEKEGS-----------KPEQIGALADQHIIHVACGESHSLALSDQGRLFSW 167

Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           G  +  ++ L    +    P LI KL      +V CG +H   L + G+ + WG N +G 
Sbjct: 168 GAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQ 227

Query: 320 LGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           LG+G       SP+RV+       +D I   +  V+ G  H+ A+S  G +  W      
Sbjct: 228 LGLGKEFPSQASPQRVKS------LDGI--PLAQVAAGGAHSFALSLSGAVFGW------ 273

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 G ++ GQLG  ++ D   P  V      K + +SCG +HT  L
Sbjct: 274 ------GKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVL 316



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL   + R  P          +  ++CG  HT  LT+TG V+  G    GQ
Sbjct: 273 WGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQ 332

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  ++    + P R+  L   EV QI+ G  H+ A +   G +Y +G    GQLG G  
Sbjct: 333 LG-HDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHT 391

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 392 CNLKCPSPVK 401


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 187/377 (49%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++A+ACG  H   +T+ G V++ G    G+LG  +  ++ +   P  + GLK   V+ ++
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 363

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +HS A+T+ G+LY+WG N+   G LG G +A + +P   K++  L GI     + G 
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP--RKLDGPLEGIHVSSVSCGP 421

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 422 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISV---------SIPREVESLKGLRTMRAACG 472

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P  
Sbjct: 473 VWHTAAVVEIMVGSSNSSNCSSGKLFTWGDG--DKCRLGHGDKEARLVPTCVATLVEPNF 530

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   T  LT+ G++YT GS   G LG    D +  P RV+G   ++ V+++    
Sbjct: 531 CQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML-PTRVEGKLMKNFVEEL---- 585

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S  ++ TWG G +            G+LGHG+  D   P++V   +
Sbjct: 586 ---ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDADDRNSPSVVEALK 630

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   + CG + T A+
Sbjct: 631 DKQVKGIVCGTSFTAAI 647



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 153/340 (45%), Gaps = 40/340 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
           WG    GRLG G       P      +  +++ +ACG  H+  +T +G +Y  G N  +F
Sbjct: 329 WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNF 388

Query: 101 GQLGI-SENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G LG  SE   +   P ++ G  +   V  +S G  H++ +T  G+L+ +G  + G LG 
Sbjct: 389 GLLGCGSEATQWV--PRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
           G + +  + IP +VE L G+ T +AA G   + AV               GK+ +WG G 
Sbjct: 447 GDRIS--VSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGD 504

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             RLGHG + + L          P  +  L        A G   +A +   G+VY  G  
Sbjct: 505 KCRLGHGDKEARL---------VPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSP 555

Query: 266 AVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G
Sbjct: 556 VYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHG 615

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             D  +SP  V     E+  D+    IV   CG   TAAI
Sbjct: 616 DADDRNSPSVV-----EALKDKQVKGIV---CGTSFTAAI 647



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 55/282 (19%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 295 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 345

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
             P+ +  L+   V++ A G  HS  +  +G +YI+G  A +  L   G+ A +  +  K
Sbjct: 346 SHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ-WVPRK 404

Query: 287 LP------YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG---SIDVLHSPERVQGP 337
           L       +   V CG +HT V+TS G+L+T+G    G LG G   S+ +    E ++G 
Sbjct: 405 LDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKG- 463

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDG 384
                        +  +CG  HTAA+ E             GK+ TWG          DG
Sbjct: 464 ----------LRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWG----------DG 503

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                +LGHG+    + PT V         QV+CG + T AL
Sbjct: 504 DKC--RLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAAL 543



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 24/209 (11%)

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           + P+ ++    + V+  A G  H+A + + G V+ +G+    ++     +    P  +  
Sbjct: 294 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 353

Query: 287 LPY--SEEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESP 342
           L     E V CG YH+C +T  G+LY WG N    G LG GS      P ++ GP     
Sbjct: 354 LKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIH 413

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
           V         VSCG  HTA + S G++ T+G     GTF        G LGHG+ +    
Sbjct: 414 VSS-------VSCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRISVSI 454

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLEYV 430
           P  V   + ++ ++ +CG  HT A++E +
Sbjct: 455 PREVESLKGLRTMRAACGVWHTAAVVEIM 483


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 155/330 (46%), Gaps = 30/330 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL--TETGCVYATGLNDF 100
           WG+G  G LG G       P V  A   +++K LAC G HT+F    E G VY+ GL  +
Sbjct: 4   WGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLAC-GLHTVFALNAEDGKVYSWGLGKY 62

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV---DGELYMWGKNSNGQLG 156
           G LG   N+     PL+I+  K   V+ IS    H++A+T     G +Y +G NSN QLG
Sbjct: 63  GILG-QGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLG 121

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           +G    +    P  V  L+     + A G   S A++  G +  WG G  G+LG      
Sbjct: 122 VGD--TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLG------ 173

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            LG    ++E T   I E +  KV   A G LH+  +   G VY FG     ++     N
Sbjct: 174 -LGNYNLSTEPTILHIGE-KKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMN 231

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    S+  V   CG +H+  +T  G+LY WG   +G LG+G      SP  
Sbjct: 232 KFHLPYRIS-FNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTE 290

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           V+G F +  + +I       +CG KHTAA+
Sbjct: 291 VEG-FRDKKIGRI-------ACGSKHTAAL 312



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 149/343 (43%), Gaps = 37/343 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKN 150
           VY  G    G LG  E+I      +  + L   + +++ G H   A+   DG++Y WG  
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             G LG G   ++  P+       S +       L      +VT  G V S+G   + +L
Sbjct: 61  KYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQL 120

Query: 210 GHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           G G           T  Y  P+L+  L    +   A G  HSA +   G ++++G     
Sbjct: 121 GVGD----------TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDG 170

Query: 269 KMLFQEGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           ++     N +  P+++    K     +V CG  HTC+LT GG +Y +GSN  G +   S+
Sbjct: 171 QLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSM 230

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
           +  H P R+   F+ S         V VSCG  H+AAI+E GK+  WG            
Sbjct: 231 NKFHLPYRIS--FNTSK------RFVSVSCGSFHSAAITENGKLYAWGL----------- 271

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
             + G+LG G+      PT V    + K  +++CG  HT AL+
Sbjct: 272 -ETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAALI 313



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 127/291 (43%), Gaps = 35/291 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWG 202
           +Y WG   NG LG G+     IP P  VE L     K+ A G     A+    GKV SWG
Sbjct: 1   VYTWGSGINGALGHGEDID--IPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWG 58

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID---ENGRV 259
            G  G LG G        LRS   + P  I   +   V   +   LH+A +      G V
Sbjct: 59  LGKYGILGQGN-------LRS--RFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSV 109

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           Y FGD +  ++   +      P L++ L      +V CG YH+  L++ G L+ WG  ++
Sbjct: 110 YSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDD 169

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           G LG+G+ ++   P  +        + +    ++ V+CG  HT       ILT G     
Sbjct: 170 GQLGLGNYNLSTEPTILH-------IGEKKAKVMDVACGDLHTC------ILTVG----- 211

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G     G +  GQ+   +   +  P  ++F  + + + VSCG  H+ A+ E
Sbjct: 212 GLVYAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITE 262



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 6/169 (3%)

Query: 27  CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTL 84
           C ++ S+ L  +    LWG GD G+LGLG+      P +    EK + +  +ACG  HT 
Sbjct: 147 CGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTC 206

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE 143
            LT  G VYA G N +GQ+       + L P RIS    K  V +S G  HS+AIT +G+
Sbjct: 207 ILTVGGLVYAFGSNIYGQIAAPSMNKFHL-PYRISFNTSKRFVSVSCGSFHSAAITENGK 265

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           LY WG  ++G+LGLG    K    PT+VE        + A G + + A+
Sbjct: 266 LYAWGLETDGRLGLGD--CKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 47  GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 159/326 (48%), Gaps = 42/326 (12%)

Query: 112 SLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
           S +P R+    SG+  E++Q ++G HHS  +  +  +Y  G NS GQLG  +  +   P 
Sbjct: 9   SRKPRRLKAGTSGI--ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  ++ L+ +     + G E SVAV   GKV +WGAG  G+LG G+   I         +
Sbjct: 67  P--IQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SF 116

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            P  IK L G+K+   + G  HS  + E+G V+ +G  +  ++    G ++R  ++  K+
Sbjct: 117 MPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKV 174

Query: 288 PYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
              E     +V  GG H+  L+  G  + WGSN +G L +    V    E++  P S   
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKV---KEQIYKPHSIGA 231

Query: 343 VDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
           +  +  S++ +SCG++HTA ++ EG++ T+G G S G       S  GQ G         
Sbjct: 232 LKNL--SVIYISCGYEHTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG--------- 277

Query: 402 PTIVNFGENVKALQVSCGFNHTGALL 427
           P ++  G   +  Q+ C   HT A +
Sbjct: 278 PQLIE-GIGGRVSQIECASYHTIAYV 302



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 29/310 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     VY+ G N +GQLG   +   +  P  I  L    V  +S G  HS
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  
Sbjct: 87  VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG    G+LG G+ S         S+  P+ +K LEG+ +   AAG  HS  +  
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197

Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
            G  + +G     ++    GN  +    +P  I  L     +   CG  HT VLT  G++
Sbjct: 198 TGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEGK 367
           +T+G N +G L          P+ ++G         I   +  + C   HT A   + G+
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEG---------IGGRVSQIECASYHTIAYVYTTGQ 307

Query: 368 ILTWGWGGSH 377
           +++ G G SH
Sbjct: 308 VVSLGRGPSH 317



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 98  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 35/261 (13%)

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           SGI   QAA G   S+ +    +V S G    G+LG           R  S   P  I+ 
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ---------RRDQSTERPEPIQA 70

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSE-- 291
           L  + V + + G  HS  +   G+V+ +G  +  ++   E    +  P+ I  L   +  
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSI 350
           +V CG YH+  L+  G +++WG N  G LG+G      + P++V+      P+ Q     
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQ----- 184

Query: 351 VLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIVNF 407
             V+ G  H+ A+S     ++GWG +            GQL   GN V      P  +  
Sbjct: 185 --VAAGGTHSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSIGA 231

Query: 408 GENVKALQVSCGFNHTGALLE 428
            +N+  + +SCG+ HT  L E
Sbjct: 232 LKNLSVIYISCGYEHTAVLTE 252


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 185/446 (41%), Gaps = 78/446 (17%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G   YG LGLG ++ R  P     F++ ++  +A G  H   LT  G V   G N  G
Sbjct: 43  VFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSG 102

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG   N   S  P +I  LK   +  IS+  G  + + I+ DG+LY  G N+ GQLG G
Sbjct: 103 QLGHGNNKSIST-PKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHG 161

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG---GSGRLGHGQES 215
            ++   +  PT V+ L        +  +  S+ VT   +  S         GR  +GQ  
Sbjct: 162 TQSN--LSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ-- 217

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
             LG   +  E TP++I+ L   +V   A G  HS  +  +G V+  G     ++   + 
Sbjct: 218 --LGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDT 275

Query: 276 NHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI----------- 322
               +P LI  L   +  +  CG YHT V    GE+Y +G N+ G LGI           
Sbjct: 276 KSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPK 335

Query: 323 ---------------GSIDVLHSPERVQGPFSES---------------------PVDQI 346
                          G+ + LHS +    P S+S                     P  Q 
Sbjct: 336 QIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQY 395

Query: 347 CTSIVLVS---CGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
            +  V +S   CG  H+ A+ E G++ T+G G              GQLG GN  D   P
Sbjct: 396 LSKKVNISKIACGCYHSIALCESGQLFTFGRGNH------------GQLGQGNTEDQKLP 443

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
             V    + K + ++ GF HT  L++
Sbjct: 444 KQVASLHDKKVIGIAGGFYHTIVLVK 469



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 44/293 (15%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++++G+NS G+LGLG    +   IP++V     +   Q A G E    +T  G VL+ G 
Sbjct: 41  VFVFGQNSYGELGLGDVQER--SIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYI 261
            GSG+LGHG   SI          TP+ I+ L+ +++    +A G  + A I ++G++Y 
Sbjct: 99  NGSGQLGHGNNKSI---------STPKKIESLKNIRITHISSANGCENLAIISQDGKLYT 149

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE--------LYT 311
            G     ++     ++   P+L+  L  ++   V C  YH+ ++T            +Y+
Sbjct: 150 CGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-SIVLVSCGWKHTAAISEGKILT 370
            G N+NG LG          E      +   +  + T  ++  +CG  H+  ++      
Sbjct: 210 VGRNDNGQLG---------QEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVT------ 254

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
                 HG     G +  GQLGH +      P ++   +N   +Q +CG+ HT
Sbjct: 255 -----VHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHT 302


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 181/378 (47%), Gaps = 55/378 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 425

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V++I   
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEI--- 590

Query: 350 IVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
               SCG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   
Sbjct: 591 ----SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEAL 634

Query: 409 ENVKALQVSCGFNHTGAL 426
           ++ +   V CG N T A+
Sbjct: 635 KDKQVRTVVCGINFTAAI 652



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 561

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D   SP  V     E+  D+   ++V   CG   TAAI
Sbjct: 622 TDDRSSPTLV-----EALKDKQVRTVV---CGINFTAAI 652



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           IP  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 300 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 350

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +G+   +  L   GN      P  +
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVES----- 465

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 466 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 510

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         Q++CG   T AL
Sbjct: 511 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVAL 548



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP      
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEG--- 416

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 +  +SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 417 ----IHVSAISCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVP 460

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 461 REVESLKGLRTVRAACGVWHTAAVVEVM 488


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 40/346 (11%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           L + E+G V+      FG+   +E+I     P +      + V IS G  H++ +T +G+
Sbjct: 1   LCVLESGAVFT-----FGKSRFAEDI-----PSKFWFKNDKPVLISCGDEHTAIVTGNGK 50

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LYM+G N+ GQLGLG K    +  PT V+ L    TK A  G   ++  T  G V + G 
Sbjct: 51  LYMFGSNNWGQLGLGSK--NTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGG 108

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG G         RST         +    K+K  AAG   SA + E+G+++++G
Sbjct: 109 NSEGQLGLGDTEE-----RSTFHLISFFTNQH---KIKQLAAGSYTSAAVTEDGQLFVWG 160

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +  ++   +      P  +        + CG YH+ ++T  GELYT+G  ENG LG+ 
Sbjct: 161 DNSEGQIGLADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGL- 219

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
                  PE+++      PV  I   +  V+CG +HT  ++E  + T+G G         
Sbjct: 220 ------LPEQLKNNRVPQPVPGIMEKVNKVACGGEHTVVLTETDVYTFGLG--------- 264

Query: 384 GHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                GQLGHG  + +   P  V      K   ++CG NHT  + E
Sbjct: 265 ---QYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAE 307



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 43/299 (14%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +    K   CG  HTL  TE G VYA G N  G
Sbjct: 53  MFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 112

Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +    S    +     + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL  +
Sbjct: 113 QLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADE 172

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A   +P    V    G      + G+  S  +TG G++ ++G   +G+LG   E      
Sbjct: 173 ACVSVPCQVDV----GKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQ----- 223

Query: 221 LRSTSEYTPRLIKELEGV--KVKIAAAGFLHSACIDENGRVYIFG--------------D 264
           L++      R+ + + G+  KV   A G  H+  + E   VY FG              +
Sbjct: 224 LKNN-----RVPQPVPGIMEKVNKVACGGEHTVVLTETD-VYTFGLGQYGQLGHGTFIFE 277

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            +V K +     H RR  + +       + CG  HT V+   G ++T+G   +G LG+G
Sbjct: 278 TSVPKSV----KHLRRHKICN-------ITCGENHTAVVAENGLMFTFGDGRHGKLGLG 325



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 162/366 (44%), Gaps = 48/366 (13%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+      ++CG  HT  +T  G +Y  G N++GQLG+      S +P  +  LK E  +
Sbjct: 27  FKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVS-KPTCVKALKPEKTK 85

Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
           ++  G +H+   T  G +Y  G NS GQLGLG    +          L   FT     KQ
Sbjct: 86  LAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEER------STFHLISFFTNQHKIKQ 139

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A G   S AVT  G++  WG    G++G   E+ +           P  +    G  V 
Sbjct: 140 LAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACV---------SVPCQVD--VGKPVS 188

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLISK-LPYSEEVVCGGY 298
             + G+ HSA I  +G +Y FG+    K  +L ++  + R P  +   +    +V CGG 
Sbjct: 189 SISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGE 248

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGW 357
           HT VLT   ++YT+G  + G LG G+     S P+ V+         +IC     ++CG 
Sbjct: 249 HTVVLTE-TDVYTFGLGQYGQLGHGTFIFETSVPKSVK----HLRRHKICN----ITCGE 299

Query: 358 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            HTA ++E G + T+G  G HG            LG  N  +   PT+         L V
Sbjct: 300 NHTAVVAENGLMFTFG-DGRHGKLG---------LGEENYTNQFDPTLCYNFLRFTVLLV 349

Query: 417 SCGFNH 422
           +CG  H
Sbjct: 350 ACGGCH 355


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 156/331 (47%), Gaps = 30/331 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  S  +R  PV  S      + A+A G  HT+ L   G V+A G N+ GQ
Sbjct: 167 WGANWNGQLGDESTTNRSTPVQVSGLTD--VIAIAGGAYHTIALKSDGTVWAWGNNEGGQ 224

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+++SGL  +V+ I+ GY H+ A+  DG ++ WG N  G+LG G    
Sbjct: 225 LGDGSTTDRS-TPVQVSGL-TDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTN 282

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + IP+  KV  LS +     A G   ++A+   G V +WG    G+LG G          
Sbjct: 283 RSIPV--KVGGLSDVI--AIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGS--------- 329

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V   A G+ H+  +  +G V+ +G     ++      +   P 
Sbjct: 330 TTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPV 387

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +  G YHT  + S G ++ WG N  G LG G+     +P +V G      
Sbjct: 388 QVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNG------ 441

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
                T ++ ++ G+ HT A+ S+G + TWG
Sbjct: 442 ----LTDVIAIAGGYYHTIAMKSDGAVWTWG 468



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 163/352 (46%), Gaps = 42/352 (11%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
            ++ G  HTL L   G V+A G N  GQLG    I  S  P+++SGL  +V+ I+ G +H+
Sbjct: 1044 ISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS-TPVQVSGLT-DVIAIAGGDYHT 1101

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
             A+  D  ++ WG NS GQLG G    + IP P  V  L+ I     A G+  ++A+   
Sbjct: 1102 IALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNII--AIAGGYVHTIALKSD 1157

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG-FLHSACID 254
            G V +WG  G G+LG G          +T+  TP  +  L  V   IA AG ++H+  + 
Sbjct: 1158 GTVWAWGYNGYGQLGDGS---------TTNRSTPVQVSGLTDV---IAIAGEYVHTVALK 1205

Query: 255  ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
             +G V+ +G     ++      +   P  +S L     +  G  HT  L S G ++TWG 
Sbjct: 1206 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGW 1265

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
            N +G LG G+     +P +V G           T  + ++ G  HT A+     + W W 
Sbjct: 1266 NNSGQLGDGTTINRLTPVQVSG----------LTDAIAIAGGDYHTIALKSDNTV-WAW- 1313

Query: 375  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     G +S GQLG G  ++ + P  V       A+ ++ G  HT AL
Sbjct: 1314 ---------GSNSYGQLGDGTTINRLTP--VQVSGLTDAIAIAGGDYHTIAL 1354



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 162/352 (46%), Gaps = 42/352 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           ++ G  HTL L   G V+  G N  GQLG  E+      P+++SGL  +V+ I+ G +H+
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLG-DESTTNRSTPVQVSGLT-DVIAIAGGAYHT 205

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N  GQLG G    +  P+  +V  L+ +     A G+  ++A+   
Sbjct: 206 IALKSDGTVWAWGNNEGGQLGDGSTTDRSTPV--QVSGLTDVI--AIAGGYAHTIALKSD 261

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    GRLG G          +T+   P  +  L    V   A G  H+  +  
Sbjct: 262 GTVWAWGDNEGGRLGDGS---------TTNRSIPVKVGGLS--DVIAIAGGNAHTIALKS 310

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V+ +GD    ++      +   P  +S L     +  G  HT VL S G ++TWG N
Sbjct: 311 DGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSDGTVWTWGHN 370

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
           E G LG GS     +P +V G             ++ ++ G  HT A+ S+G +  W   
Sbjct: 371 EGGQLGDGSTTNRSTPVQVSG----------LADVIAIAGGVYHTIAVKSDGTMWAW--- 417

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    G++  GQLG G  ++   P  VN   +V A  ++ G+ HT A+
Sbjct: 418 ---------GYNWYGQLGDGTTINSSTPVQVNGLTDVIA--IAGGYYHTIAM 458



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 155/329 (47%), Gaps = 30/329 (9%)

Query: 50  RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
           +LG GS      PV  S        A+A G  HT+ L   G V+  G N+ GQLG    I
Sbjct: 622 QLGDGSTTDSSTPVQVSGLTD--AIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTI 679

Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
             S  P+++ GL  +V+ I+ G +H+ A+  DG ++ WG N  GQLG G    +  P+  
Sbjct: 680 NRS-TPVQVIGLT-DVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPV-- 735

Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
           +V+ L+ I     A G+  S+A+   G V +WG  G G+LG G          +T   TP
Sbjct: 736 QVKGLADII--AIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGS---------TTDHLTP 784

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
             +  L    +   A G++H+  +  +G V+ +G     ++      ++  P  +S L  
Sbjct: 785 VQVSGL--TDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD 842

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
              V    YHT  L S G ++TWG N  G LG GS      P +V G           T 
Sbjct: 843 VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIG----------LTD 892

Query: 350 IVLVSCGWKHTAAI-SEGKILTWGWGGSH 377
           ++ ++ G+ HT A+ S+G +  WG+ G++
Sbjct: 893 VIAIAGGYYHTIALKSDGAVWAWGYNGNN 921



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 139/291 (47%), Gaps = 19/291 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN + G+LG GS   R  PV  S      + A+A G AHT+ L   G V+A G N+ G+
Sbjct: 217 WGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIAIAGGYAHTIALKSDGTVWAWGDNEGGR 274

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P+++ GL  +V+ I+ G  H+ A+  DG ++ WG N  GQLG G    
Sbjct: 275 LGDGSTTNRSI-PVKVGGLS-DVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTN 332

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  KV  L+ +     A G+  ++ +   G V +WG    G+LG G          
Sbjct: 333 RSTPV--KVSGLADVI--AIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGS--------- 379

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V   A G  H+  +  +G ++ +G     ++      ++  P 
Sbjct: 380 TTNRSTPVQVSGLA--DVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPV 437

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            ++ L     +  G YHT  + S G ++TWG N  G LG GSI    +P +
Sbjct: 438 QVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQ 488



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 25/282 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  YG+LG G++ +R  P   +      + A+A G  HT+ L   G V+A G N +GQ
Sbjct: 1113 WGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVHTIALKSDGTVWAWGYNGYGQ 1170

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       S  P+++SGL  +V+ I+  Y H+ A+  DG ++ WG N  GQLG G    
Sbjct: 1171 LGDGSTTNRS-TPVQVSGLT-DVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTN 1228

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V  L+ +     A G+  ++A+   G V +WG   SG+LG G          
Sbjct: 1229 RSTPV--QVSGLTDVI--AIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGT--------- 1275

Query: 223  STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
            + +  TP    ++ G+   IA A G  H+  +  +  V+ +G  +  ++   +G    R 
Sbjct: 1276 TINRLTP---VQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQL--GDGTTINRL 1330

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             P  +S L  +  +  G YHT  L S   ++ WGSN  G LG
Sbjct: 1331 TPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1372



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 160/356 (44%), Gaps = 44/356 (12%)

Query: 49   GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
            G+LG G+  +R  PV  S      + A+A G  HT+ L     V+A G N +GQLG    
Sbjct: 1069 GQLGDGTTINRSTPVQVSGLTD--VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTI 1126

Query: 109  IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
               S+ P  ++ L   ++ I+ GY H+ A+  DG ++ WG N  GQLG G    +  P+ 
Sbjct: 1127 TNRSI-PTPVTYL-TNIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPV- 1183

Query: 169  TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             +V  L+ +     A  +  +VA+   G V +WG  G G+LG G          +T+  T
Sbjct: 1184 -QVSGLTDVI--AIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGS---------TTNRST 1231

Query: 229  PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
            P  +  L    V   A G++H+  +  +G V+ +G     ++   +G    R  P  +S 
Sbjct: 1232 PVQVSGL--TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQL--GDGTTINRLTPVQVSG 1287

Query: 287  LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
            L  +  +  G YHT  L S   ++ WGSN  G LG G+     +P +V G          
Sbjct: 1288 LTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSG---------- 1337

Query: 347  CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             T  + ++ G  HT A+     + W W          G +S GQLG  +  + + P
Sbjct: 1338 LTDAIAIAGGDYHTIALKSDNTV-WAW----------GSNSYGQLGDVSTANSLTP 1382



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 42/352 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           ++ G  HTL L   G V+A G N   QLG       S  P+++SGL  + + I+ G +H+
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSS-TPVQVSGL-TDAIAIAGGVYHT 653

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N++GQLG G    +  P+  +V  L+ +     A G   ++A+   
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRSTPV--QVIGLTDVI--AIAGGDYHTIALKSD 709

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G          +T+  TP  +K L    +   A G++HS  +  
Sbjct: 710 GTVWTWGFNYYGQLGGGA---------TTNRSTPVQVKGLA--DIIAIAGGYVHSIALKS 758

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V+ +G     ++          P  +S L     +  G  HT  L S G ++ WG N
Sbjct: 759 DGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHN 818

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
           E G LG G+     +P +V G           T ++ V+    HT A+ S+G + TW   
Sbjct: 819 EGGQLGDGTTTNSSTPVQVSG----------LTDVIAVTARLYHTIALKSDGTVWTW--- 865

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    G +  GQLG G+  +   P  V    +V A  ++ G+ HT AL
Sbjct: 866 ---------GRNIYGQLGDGSTTERSLPVQVIGLTDVIA--IAGGYYHTIAL 906



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 193/457 (42%), Gaps = 90/457 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ + G+LG GS  +R  PV  S      + A+A G  HT+ +   G ++A G N +GQ
Sbjct: 367 WGHNEGGQLGDGSTTNRSTPVQVSGLAD--VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQ 424

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S  P++++GL  +V+ I+ GY+H+ A+  DG ++ WG N  GQLG G    
Sbjct: 425 LGDGTTINSS-TPVQVNGLT-DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITN 482

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQES---- 215
           +  P    +  +  + T     G    V+++     G V   G   +    +G  +    
Sbjct: 483 RSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNGNGVATTAWFDYGTSTGMYF 542

Query: 216 ----------------SILGFLRSTSEYTPRLIKELEG-----------VKVKIAAAGFL 248
                           + LG L   + Y  R+  +  G            + +I+A  + 
Sbjct: 543 DATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQISAGAY- 601

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           H+  +  +G V+ +G     ++       +  P  +S L  +  +  G YHT  L S G 
Sbjct: 602 HTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGT 661

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGK 367
           ++TWG N +G LG G+     +P +V G           T ++ ++ G  HT A+ S+G 
Sbjct: 662 VWTWGWNNSGQLGDGTTINRSTPVQVIG----------LTDVIAIAGGDYHTIALKSDGT 711

Query: 368 ILTWGW------GG--------------------------------SHGTFSEDGHSSGG 389
           + TWG+      GG                                S GT    G++  G
Sbjct: 712 VWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYG 771

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           QLG G+  D++ P  V+   ++ A  ++ G+ HT AL
Sbjct: 772 QLGDGSTTDHLTPVQVSGLTDIIA--IAGGYIHTIAL 806



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 23/293 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G+  +R  PV         + A+A G  HT+ L   G V+  G N +GQ
Sbjct: 665 WGWNNSGQLGDGTTINRSTPVQVIGLTD--VIAIAGGDYHTIALKSDGTVWTWGFNYYGQ 722

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+++ GL  +++ I+ GY HS A+  DG ++ WG N  GQLG G    
Sbjct: 723 LGGGATTNRS-TPVQVKGLA-DIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTD 780

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+  +V  L+ I     A G+  ++A+   G V +WG    G+LG G          
Sbjct: 781 HLTPV--QVSGLTDII--AIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGT--------- 827

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V    A   H+  +  +G V+ +G     ++   +G+   R  
Sbjct: 828 TTNSSTPVQVSGL--TDVIAVTARLYHTIALKSDGTVWTWGRNIYGQL--GDGSTTERSL 883

Query: 283 LISKLPYSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  +  ++ +   G  YHT  L S G ++ WG N N  LG  S     +P R
Sbjct: 884 PVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVR 936



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 132/301 (43%), Gaps = 40/301 (13%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           QIS G +H+  +  DG ++ WG N NGQLG      +  P+  +V  L+ +     A G 
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPV--QVSGLTDVI--AIAGGA 202

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             ++A+   G V +WG    G+LG G          +T   TP  +  L    V   A G
Sbjct: 203 YHTIALKSDGTVWAWGNNEGGQLGDGS---------TTDRSTPVQVSGL--TDVIAIAGG 251

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
           + H+  +  +G V+ +GD    ++      +   P  +  L     +  G  HT  L S 
Sbjct: 252 YAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHTIALKSD 311

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
           G ++ WG NE G LG GS     +P +V G             ++ ++ G+ HT  + S+
Sbjct: 312 GTVWAWGDNEGGQLGDGSTTNRSTPVKVSG----------LADVIAIAGGYSHTIVLRSD 361

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G + TW            GH+ GGQLG G+  +   P  V+   +V A  ++ G  HT A
Sbjct: 362 GTVWTW------------GHNEGGQLGDGSTTNRSTPVQVSGLADVIA--IAGGVYHTIA 407

Query: 426 L 426
           +
Sbjct: 408 V 408



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 40/301 (13%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            QIS G +H+  +  DG ++  G N NGQLG G    +  P+  +V  L+ +     A G 
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPV--QVSGLTDVI--AIAGGD 1098

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              ++A+     V +WG+   G+LG G           T+   P  +  L    +   A G
Sbjct: 1099 YHTIALKSDNTVWAWGSNSYGQLGDGTI---------TNRSIPTPVTYL--TNIIAIAGG 1147

Query: 247  FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            ++H+  +  +G V+ +G     ++      +   P  +S L     +     HT  L S 
Sbjct: 1148 YVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSD 1207

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
            G ++ WG N  G LG GS     +P +V G           T ++ ++ G+ HT A+ S+
Sbjct: 1208 GTVWAWGYNGYGQLGDGSTTNRSTPVQVSG----------LTDVIAIAGGYVHTIALKSD 1257

Query: 366  GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G + TWGW  S            GQLG G  ++ + P  V       A+ ++ G  HT A
Sbjct: 1258 GTVWTWGWNNS------------GQLGDGTTINRLTP--VQVSGLTDAIAIAGGDYHTIA 1303

Query: 426  L 426
            L
Sbjct: 1304 L 1304



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 42/303 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-AL 184
            QIS G +H+  +  DG ++ +G N N QLG G       P+      +SG+    A A 
Sbjct: 594 TQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQ-----VSGLTDAIAIAG 648

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++A+   G V +WG   SG+LG G          + +  TP  +  L    V   A
Sbjct: 649 GVYHTIALKSDGTVWTWGWNNSGQLGDGT---------TINRSTPVQVIGL--TDVIAIA 697

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
            G  H+  +  +G V+ +G     ++      +   P  +  L     +  G  H+  L 
Sbjct: 698 GGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALK 757

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI- 363
           S G ++ WG N  G LG GS     +P +V G           T I+ ++ G+ HT A+ 
Sbjct: 758 SDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSG----------LTDIIAIAGGYIHTIALK 807

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           S+G +  W            GH+ GGQLG G   +   P  V+   +V A  V+    HT
Sbjct: 808 SDGTVWAW------------GHNEGGQLGDGTTTNSSTPVQVSGLTDVIA--VTARLYHT 853

Query: 424 GAL 426
            AL
Sbjct: 854 IAL 856



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 8/132 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+  +R  PV  S        A+A G  HT+ L     V+A G N +GQ
Sbjct: 1263 WGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQ 1320

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG    I   L P+++SGL  + + I+ G +H+ A+  D  ++ WG NS GQLG    A 
Sbjct: 1321 LGDGTTIN-RLTPVQVSGLT-DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTAN 1378

Query: 163  KVIPIPTKVECL 174
             + P     +CL
Sbjct: 1379 SLTP----AQCL 1386


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 145/330 (43%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4071 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4130

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  +E L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4131 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4182

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4183 ---SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4239

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4240 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHAL 4299

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4300 QGK--------KITRVACGSAHTLAWSTMK 4321



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 179/396 (45%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV+C +        L  GG  TLF +T  G VYATG    G
Sbjct: 3958 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 4016

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 4017 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4074

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L G      A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4075 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4128

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  + TP+LI+ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4129 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4183

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4184 DGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4243

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A ++ G++ TWG             +  G
Sbjct: 4244 VAALQG-----------KKIISIATGSLHCVACTDKGEVFTWG------------DNDEG 4280

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4281 QLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4316



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 153/326 (46%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K ++   GG H L LT+ G V++ G  + G
Sbjct: 2992 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDG 3051

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   +I    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3052 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3110

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A +    P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3111 ATQ--SKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3163

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3164 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3219

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3220 RKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE 3279

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 3280 -LDDARVNR-------VSCGSSHSIA 3297



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 191/400 (47%), Gaps = 44/400 (11%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
            Q     +WG  D  +LG G   S+ + PV      K     +A GG+ TLF+ ++ G +Y
Sbjct: 2932 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2989

Query: 94   ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
            A G    G+LG+ ++     EP  I  L + V++   + +G  H+ A+T DG+++ WG+ 
Sbjct: 2990 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEG 3048

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             +G+LG G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLG
Sbjct: 3049 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 3106

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
            HG          + ++  P+L++ L G ++   A G     +  +  +G VY +GD    
Sbjct: 3107 HGD---------TATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFG 3157

Query: 269  KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            K+     +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+  
Sbjct: 3158 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3217

Query: 327  VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 385
             +  P  V+G   +         ++ V+ G  H  A+++ G++  WG         ++ H
Sbjct: 3218 HVRKPTLVEGLRGKK--------VIHVAVGALHCLAVTDIGQVYAWG---------DNDH 3260

Query: 386  SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
               GQ G+G  +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3261 ---GQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3297



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 64/357 (17%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQ----------E 2985

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +    P P  +  LS    K+ ++  G + ++A+T  GKV 
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKP--IPFLSQYVIKKVSVHSGGKHALALTQDGKVF 3043

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 3044 SWGEGEDGKLGHGN---------SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3094

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      ++ CG     T  LT+ G +Y+WG  
Sbjct: 3095 YTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDG 3154

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTW 371
            + G LG G  D  ++P   +R+ G             +V + CG + + A+++ G++ TW
Sbjct: 3155 DFGKLGRGGSDGCYTPLLIDRLNG-----------LGVVQIECGAQFSLALTKYGEVWTW 3203

Query: 372  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G G               +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3204 GKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 153/344 (44%), Gaps = 38/344 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 4011

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 4012 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4069

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4070 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P LI  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4121 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4180

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            G  D    P +++              +V V CG + + A++  G I TWG G  H    
Sbjct: 4181 GGSDGCKIPMKIESLAG--------LGVVKVECGSQFSVALTRSGAIYTWGKGDYH---- 4228

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                    +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4229 --------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4264



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 142/316 (44%), Gaps = 28/316 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           + +Y     +LG K   C        +R    L  NG+   +  GS E+++ P     F 
Sbjct: 451 SPFYYDTIAELGIKQLCCT-------ERALMILSVNGNVYMMYYGS-ETQY-PQRVYGFS 501

Query: 70  KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVV 126
           +  +  +A    G H L LT+   VY+ G  D G+LG  +   Y  EP  I  L +K + 
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYD-EPKLIEALVEKNIT 560

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            I+ G  +S+A++ +GELY WG+ + G+LG G   +  + IPT V  L+G      A G 
Sbjct: 561 FIACGSTYSAALSSNGELYTWGRGNYGRLGHGN--SDNVMIPTLVTALNGHMVVYVACGS 618

Query: 187 --EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
              Q++ VT  G V SWG G  G+LG G               TP+++ +L  + V    
Sbjct: 619 GDSQTLCVTASGIVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVY 669

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCV 302
            G   SA +   G VY +G     ++     +H R P +I   K    +E+  G  H   
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLA 729

Query: 303 LTSGGELYTWGSNENG 318
           LT    +Y WG N+ G
Sbjct: 730 LTEDQLIYGWGRNDYG 745



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 38/309 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG 131
           +K L C     + L+  G VY        Q            P R+ G  +K ++ I++ 
Sbjct: 463 IKQLCCTERALMILSVNGNVYMMYYGSETQY-----------PQRVYGFSEKPIIMIASH 511

Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
               H  A+T D  +Y WG    G+LG G +A      P  +E L        A G   S
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAW--YDEPKLIEALVEKNITFIACGSTYS 569

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
            A++  G++ +WG G  GRLGHG   +++          P L+  L G  V   A  +G 
Sbjct: 570 AALSSNGELYTWGRGNYGRLGHGNSDNVM---------IPTLVTALNGHMVVYVACGSGD 620

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
             + C+  +G V+ +GD    K+     + ++ P ++ KL      +V CGG  +  LT+
Sbjct: 621 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA 680

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            GE+YTWG  E   LG G+ D +  P ++        V ++C        G  H  A++E
Sbjct: 681 YGEVYTWGKGEAYRLGHGNEDHVRYP-KIIDILKTKKVKELCV-------GNLHVLALTE 732

Query: 366 GKILTWGWG 374
            +++ +GWG
Sbjct: 733 DQLI-YGWG 740



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N   QLG G K +K I +P   E LS +     A G +    V+  GK+ + G 
Sbjct: 2936 VYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2993

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G +S++           P+ I  L    +K  +  +G  H+  + ++G+V+ 
Sbjct: 2994 GTNGRLGLGDDSNVC---------EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFS 3044

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  E G 
Sbjct: 3045 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILTWGWGGS 376
            LG G       P+ VQ    +         I+ ++CG +     A  ++G + +WG    
Sbjct: 3105 LGHGDTATQSKPKLVQSLVGQ--------RIIQIACGSRDAQTMALTADGLVYSWG---- 3152

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
             G F        G+LG G       P +++    +  +Q+ CG   + AL +Y
Sbjct: 3153 DGDF--------GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY 3197



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG  +             P+LI+ L    +   A G  +
Sbjct: 518 LALTQDNSVYSWGNGDGGRLGHGDRAWY---------DEPKLIEALVEKNITFIACGSTY 568

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     ++   P+L++ L       V CG     T  +T+
Sbjct: 569 SAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTA 628

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G +++WG    G LG G  D   +P+ V              ++  V CG + +AA++ 
Sbjct: 629 SGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLD--------INVAKVYCGGQFSAALTA 680

Query: 366 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G ++            +LGHGN+    +P I++  +  K  ++  G  H  
Sbjct: 681 YGEVYTWGKGEAY------------RLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVL 728

Query: 425 ALLE 428
           AL E
Sbjct: 729 ALTE 732



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG G E + +          P L + L  ++      G      +
Sbjct: 3951 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 4001

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+VY  G  AV ++     +    P+L+  + +       V  GG H   L+S G +
Sbjct: 4002 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKI 368
            Y+WG  ++G LG G+      P+ ++        + + T IV ++CG  H+AAI S G +
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIE--------ELLGTEIVDIACGGHHSAAITSAGWL 4113

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P ++   ++ K + V+CG
Sbjct: 4114 YTWGKG------------RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 4152



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 4/150 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+YG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  +  +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 694

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N  +   P  I  LK K+V ++  G  H  A+T D  +Y WG+N  GQ  +    
Sbjct: 695 LG-HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQ--IDPAL 751

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             V+P PT    LSG      A G  QS A
Sbjct: 752 GTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 255  ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTW 312
            ++  VY++G    D++   +G+  + P     L   + V + GG  T  V++  G+LY  
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2991

Query: 313  GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTW 371
            G   NG LG+G    +  P+ +  PF    + Q     V V  G KH  A++ +GK+ +W
Sbjct: 2992 GEGTNGRLGLGDDSNVCEPKPI--PF----LSQYVIKKVSVHSGGKHALALTQDGKVFSW 3045

Query: 372  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G G       EDG     +LGHGN +    P ++   ++ +   ++CG  H+ A+
Sbjct: 3046 GEG-------EDG-----KLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI 3088


>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
 gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
          Length = 364

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 177/381 (46%), Gaps = 45/381 (11%)

Query: 43  WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           WG   YG+LGLG      +  +   +  +     ++ A+A G  HTL L + G VY  G 
Sbjct: 6   WGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYCCGW 65

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N  GQLG S++   +L+  +I  LK   +VQIS G+  S+A++  G+ ++WG NS  QLG
Sbjct: 66  NSKGQLGTSDD---TLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSYTQLG 122

Query: 157 LGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           L  K+     IP++++    + T  KQ + G   S  +   G +L  G G  G+LG G  
Sbjct: 123 L-SKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDN 181

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                +L  +       + +LE + V I A+G  H+  + E+G VY +G+    ++    
Sbjct: 182 FDDNNYLSISK------VPDLEDI-VSI-ASGQHHTVVLKEDGTVYSWGENKYGQLGIDP 233

Query: 275 G-NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             +++  P  I        V  G  HT  L+  GE++TWG N  G LG    +V + PE+
Sbjct: 234 NISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG-AQREVTYKPEK 292

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           + G             +  +S G +H  A++ +GK+  WGW            +  G  G
Sbjct: 293 IPG----------LKDVTQLSVGSEHNLAVTKDGKLFVWGW------------NEHGSCG 330

Query: 393 HGNDVDYIHPTIVNFGENVKA 413
            G+  D   PT +     VKA
Sbjct: 331 TGDKTDVCKPTQIFANRKVKA 351



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 157/347 (45%), Gaps = 45/347 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYM 146
           +Y+ G N +GQLG+       + P  ++      +   +V I+ G  H+  +  +G +Y 
Sbjct: 3   LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYC 62

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G NS GQLG      K+    T++E L G    Q + G++ S AV+  GK   WG    
Sbjct: 63  CGWNSKGQLGTSDDTLKI----TQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSY 118

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            +LG  +  +  G + S  + + +L    + V     + G  HSA ++++G + + G  +
Sbjct: 119 TQLGLSKSITCTG-IPSRLQVSQKLATGFKQV-----SCGLRHSAMLNKDGGLLVAGTGS 172

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++   +         ISK+P  E++V    G +HT VL   G +Y+WG N+ G LGI 
Sbjct: 173 KGQLGLGDNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGI- 231

Query: 324 SIDVLHSPERVQGPFSESPVDQI-CTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
                     +   F   P++ +   ++  V  GW HTAA+S+ G++ TW          
Sbjct: 232 -------DPNISNSF--VPMEILHDANLGSVYAGWTHTAALSKSGEVFTW---------- 272

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             G +S GQLG   +V Y    I    +     Q+S G  H  A+ +
Sbjct: 273 --GRNSYGQLGAQREVTYKPEKIPGLKD---VTQLSVGSEHNLAVTK 314



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 14/237 (5%)

Query: 2   LGRSLTAM---TKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-WGNGDYGRLGLG-SL 56
           L +S+T     ++  + Q +  G K   C    S+ L +    L  G G  G+LGLG + 
Sbjct: 123 LSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDNF 182

Query: 57  ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
           +      +    +   + ++A G  HT+ L E G VY+ G N +GQLGI  NI  S  P+
Sbjct: 183 DDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNISNSFVPM 242

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
            I      +  +  G+ H++A++  GE++ WG+NS GQLG  +   +V   P K+  L  
Sbjct: 243 EILH-DANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQR---EVTYKPEKIPGLKD 298

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           +   Q ++G E ++AVT  GK+  WG    G  G G ++ +    + T  +  R +K
Sbjct: 299 V--TQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDKTDV---CKPTQIFANRKVK 350



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 21/227 (9%)

Query: 42  LWGNGDYGRLGLG-SLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLN 98
           +WGN  Y +LGL  S+     P      +K +   K ++CG  H+  L + G +   G  
Sbjct: 112 VWGNNSYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTG 171

Query: 99  DFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             GQLG+ +N   +   L IS +   +++V I++G HH+  +  DG +Y WG+N  GQLG
Sbjct: 172 SKGQLGLGDNFDDN-NYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLG 230

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           +    +    +P  +E L          G+  + A++  G+V +WG    G+LG  +E +
Sbjct: 231 IDPNISNSF-VP--MEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQREVT 287

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     Y P  I  L+   V   + G  H+  + ++G+++++G
Sbjct: 288 ----------YKPEKIPGLK--DVTQLSVGSEHNLAVTKDGKLFVWG 322


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 190/404 (47%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4229 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4286

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4287 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4345

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L G+     A G   S A+T  G+VL+WG G  GRLGHG     
Sbjct: 4346 GNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGD---- 4399

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4400 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4449

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4450 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4507

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4508 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDSGEVYTW----------- 4545

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V+  +    ++V+CG  HT AL
Sbjct: 4546 -GDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 132/301 (43%), Gaps = 29/301 (9%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
            A+  GG H L LT  G VYA G  + G+LG    + Y    L        V  I+ G  H
Sbjct: 4315 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAH 4374

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
            S+AIT  G++  WGK   G+LG G    ++ P    VE L G      A G    Q++ +
Sbjct: 4375 SAAITASGQVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLCI 4432

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
            T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S  
Sbjct: 4433 TDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFSVA 4483

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE+Y
Sbjct: 4484 LTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY 4543

Query: 311  TWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
            TWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S  +
Sbjct: 4544 TWGDNDEGQLGDGTVTAIQRPRLVSALQG-----------KHIVKVTCGSAHTLALSTSQ 4592

Query: 368  I 368
            +
Sbjct: 4593 L 4593



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P    A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3185 WGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3244

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + VVQ++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3245 LGHGDN-ATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3303

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3304 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3359

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + ++G+VY +GD   D      GN   
Sbjct: 3360 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTFV 3410

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3411 NKKPALVIGLDDVFVNRVACGSSHS 3435



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 169/356 (47%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G V+A G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3114 GGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3172

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P +VE L     +  A G   S A++ 
Sbjct: 3173 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRQVEALRAKKIRDVACGSSHSAAISS 3230

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  +         ++  P+L+  L G +V   A G     +  
Sbjct: 3231 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALAGRRVVQVACGSRDAQTLA 3281

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3282 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3341

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 3342 TWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVTDSGQVY 3393

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   ++V   +V+CG +H+ A
Sbjct: 3394 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDDVFVNRVACGSSHSIA 3437



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4335 WGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR 4394

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4395 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4452

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4453 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4509

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4510 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4562

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L+S L   +  +V CG  HT  L++
Sbjct: 4563 RPRLVSALQGKHIVKVTCGSAHTLALST 4590



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 137/323 (42%), Gaps = 49/323 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           PV+   F+   +K + C     L L++ G ++A  L+               EP  +   
Sbjct: 581 PVLSCRFQ---VKQVVCSENQVLLLSQEGKLHAWRLSK-----------PEAEPQPLEEA 626

Query: 122 KKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
             E   IS   H    H  AI  +   Y WG   + +LG G   A+ +P  TK+  L   
Sbjct: 627 GHETF-ISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVP--TKIAALEQH 683

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-E 236
             +    G   S  +T GG +L+WG G   RLGHG          S     P L+  L E
Sbjct: 684 CVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGN---------SDDRCLPTLVAALAE 734

Query: 237 GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
              V +A  +G  HS  +   G V+ +GD    K+     N + +P L+  LP  + +  
Sbjct: 735 HTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA 794

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-----I 350
           G  ++  L+S G++YTWG  +  CLG   ++       VQG      V ++ +S     I
Sbjct: 795 GSQYSVALSSEGQVYTWG--KATCLGHQLVE-----RSVQG----CSVPRLVSSLQHKRI 843

Query: 351 VLVSCGWKHTAAI-SEGKILTWG 372
           V ++ G  H  A+ S G++  WG
Sbjct: 844 VDMAVGVAHCLALSSSGEVFGWG 866



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 15/224 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+  RLG G   +R  P   +A E+H ++++ CG  ++  +T  G +   G   + +
Sbjct: 655 WGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYAR 714

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    L  L  +  +  VV ++  +G  HS A+T +G ++ WG    G+LG G  
Sbjct: 715 LGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 774

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
              + PI   VE L  +  ++   G + SVA++  G+V +WG      LGH   E S+ G
Sbjct: 775 NGSLQPI--LVESLPRV--QRIFAGSQYSVALSSEGQVYTWGKATC--LGHQLVERSVQG 828

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    PRL+  L+  ++   A G  H   +  +G V+ +G
Sbjct: 829 C------SVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWG 866



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
           C G H + +      Y+ G  +  +LG  +    ++ P +I+ L++  VQ +  G  +S+
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSA 696

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
            IT  G L  WG+ +  +LG G    + +P  T V  L+       ALG     S+A+T 
Sbjct: 697 VITCGGNLLTWGRGTYARLGHGNSDDRCLP--TLVAALAEHTVVDVALGSGDAHSLALTS 754

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG G  G+LG+G  +  L          P L++ L   +V+   AG  +S  + 
Sbjct: 755 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLP--RVQRIFAGSQYSVALS 803

Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
             G+VY +G       +++ +       P L+S L +    ++  G  H   L+S GE++
Sbjct: 804 SEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVF 863

Query: 311 TWGSNENGCL---GIGSIDVLHSPERVQGP 337
            WG N+   +    + S  +L SP  V  P
Sbjct: 864 GWGRNDCQQVCPSSVSSEPLLRSPILVALP 893



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 124/290 (42%), Gaps = 38/290 (13%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT  + +S +     A G +    V+  G+V + G 
Sbjct: 3076 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGE 3133

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3134 GTNGRLGLGVTYNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3184

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P  +  L   +  +V CG  H+  ++S GELYTWG  E G 
Sbjct: 3185 WGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3244

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISE-GKILTWGWGGS 376
            LG G       P+ V               +V V+CG +   T A++E G + +WG    
Sbjct: 3245 LGHGDNATQLKPKLVAALAGR--------RVVQVACGSRDAQTLALTEDGAVFSWG---- 3292

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G F        G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3293 DGDF--------GKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLAL 3334



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 56/168 (33%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + R  P + +A  +H++   AL  G AH+L LT  G V+A G  D+
Sbjct: 707 WGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDY 766

Query: 101 GQLGISENIGYSLEPLRISGLK-------------------------------------- 122
           G+LG + N   SL+P+ +  L                                       
Sbjct: 767 GKLG-NGNCNGSLQPILVESLPRVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERS 825

Query: 123 ---------------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                          K +V ++ G  H  A++  GE++ WG+N   Q+
Sbjct: 826 VQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV 873



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 21/112 (18%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   + S    Y+WG+ E+  LG G       P ++        ++Q C   V   
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAA------LEQHCVQSVF-- 689

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           CG  ++A I+  G +LTWG     GT++        +LGHGN  D   PT+V
Sbjct: 690 CGCTYSAVITCGGNLLTWG----RGTYA--------RLGHGNSDDRCLPTLV 729


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 164/346 (47%), Gaps = 43/346 (12%)

Query: 92  VYATGLNDFGQLGIS---ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
           V++ G    GQLGIS   +++     P  +  L  K++ +IS G  H+  +  DG + M 
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N  GQLG  +  +++  +P        +   Q + G + ++AVT  G+VL WG    G
Sbjct: 63  GANDRGQLGQDRPGSELAHVPAT----ETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G       L    S  +  PR +K L   +V   A G +HS  +  +GR++ +GD + 
Sbjct: 119 QCG-------LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSF 171

Query: 268 DKM-LFQEGNHARR--PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++ +   G    R  P  +S LP      + CGG+H+  L+  G ++ WG N  G LG+
Sbjct: 172 GQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGL 231

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIV-LVSCGWKHTAAIS-EGKILTWGWGGSHGTF 380
           G+ +     +RV    S +P+  + T  V  ++CG  +TA ++  G +  +G G      
Sbjct: 232 GTTE-----DRV----SPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQG------ 276

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 S GQLGHG+  + ++P  V      +  QV+CG  HT  L
Sbjct: 277 ------SEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 156/361 (43%), Gaps = 34/361 (9%)

Query: 43  WGNGDYGRLGLGSL----ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG    G+LG+  L     S   P    A     ++ ++CG  HT  L   G V   G N
Sbjct: 6   WGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMCGAN 65

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           D GQLG  +  G  L    +   +  V+ Q+S G  H+ A+T  G++  WG+N  GQ GL
Sbjct: 66  DRGQLG-QDRPGSELA--HVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGL 122

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++    P  ++ LS     Q A G   S+A+T  G++ +WG    G+LG G     
Sbjct: 123 STGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPG-- 180

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
               R+     P+ +  L GV ++  A G  HS  +  +G V+ +G     ++       
Sbjct: 181 ----RTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTED 236

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P+ +  L   +   + CG  +T +LT+ G L+ +G    G LG GS     +P  VQ
Sbjct: 237 RVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQ 296

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           G         + + I  V+CG +HT  +           G  G F   G  S GQLG  N
Sbjct: 297 G--------FLGSEITQVACGRQHTLVLE----------GRTGRFFSLGQGSKGQLGLDN 338

Query: 396 D 396
           D
Sbjct: 339 D 339



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 151/343 (44%), Gaps = 32/343 (9%)

Query: 27  CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           C  W S  L    A   WG  + G+LGLG+ E R  P      +   +K +ACG  +T  
Sbjct: 204 CGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAI 263

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAIT-VDGE 143
           LT +G ++  G    GQLG   +    + P  + G L  E+ Q++ G  H+  +    G 
Sbjct: 264 LTASGGLFLFGQGSEGQLGHGSH-SNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGR 322

Query: 144 LYMWGKNSNGQLGLGKKAAK--VIPIPTKVECLSGIFTKQAALGFEQSVAVTG----GGK 197
            +  G+ S GQLGL   ++K    P+P   E  S   + +     E+S ++ G    GG 
Sbjct: 323 FFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPS---STEGCSNGEESRSIIGSIFAGGD 379

Query: 198 ----VLSWGAGGSGRLGHGQ-----ESSIL--GFLRSTSEYTPRL--IKELEGVKVKIAA 244
               ++S G      L   +     E  +L    L+  SE +P L   K ++ +++ +++
Sbjct: 380 QSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSS 439

Query: 245 AGFLHSACI--DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
              L+++ +    +G +++FG  +  ++     ++   P  +     +E  +V CG  HT
Sbjct: 440 PACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHT 499

Query: 301 CVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            VL    G  Y+ G    G LG+ +         V GP+ E+P
Sbjct: 500 LVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLVPGPW-EAP 541


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 157/339 (46%), Gaps = 40/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  +V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARLN---------PTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++     N   RP L+     +E   +V CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 329 GQL--GNPNSDGRPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGD 386

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           I+    P  V     E+  D+   S+  ++CG   TAAI
Sbjct: 387 IEDQKVPTLV-----EALKDR---SVRHIACGANFTAAI 417



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 167/378 (44%), Gaps = 69/378 (18%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGY 132
           + CG  H   +T +G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G 
Sbjct: 82  VDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGE 138

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T  GELY WG  ++  G LG G      IP   ++   L G+     + G   +
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP--RRISGALEGLQVAYVSCGTWHT 196

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGNVKSI---------SCPREVESLSGLKTIAVACGVWH 247

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVV 294
           +A I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V 
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLNPTCVASLIDYDFYRVA 305

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE-SPV---DQICTSI 350
           CG   T  LT+ G+++T G++  G LG               P S+  P    D+I    
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLG--------------NPNSDGRPCLVGDKITNEH 351

Query: 351 VL-VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           VL V+CG  H + + S  ++ TWG G +            G+LGHG+  D   PT+V   
Sbjct: 352 VLQVACGSYHVSVLTSRSEVFTWGKGAN------------GRLGHGDIEDQKVPTLVEAL 399

Query: 409 ENVKALQVSCGFNHTGAL 426
           ++     ++CG N T A+
Sbjct: 400 KDRSVRHIACGANFTAAI 417



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  +G V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
            R+ G             +  VSCG  HTA I S G++ T+G G            S G 
Sbjct: 175 RRISGALEG-------LQVAYVSCGTWHTALITSMGQLFTFGDG------------SFGV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 145/330 (43%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 3902 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 3961

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  +E L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 3962 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4013

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4014 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4070

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4071 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHAL 4130

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4131 QGK--------KITRVACGSAHTLAWSTMK 4152



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 153/326 (46%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2907

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   +I    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 2908 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 2966

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A +    P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 2967 ATQ--SKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3019

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3020 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3075

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3076 RKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE 3135

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 3136 -LDDARVNR-------VSCGSSHSIA 3153



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 179/396 (45%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV+C +        L  GG  TLF +T  G VYATG    G
Sbjct: 3789 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3847

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3848 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 3905

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L G      A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 3906 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 3959

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  + TP+LI+ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 3960 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4014

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4015 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4074

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A ++ G++ TWG             +  G
Sbjct: 4075 VAALQG-----------KKIISIATGSLHCVACTDKGEVFTWG------------DNDEG 4111

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4112 QLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4147



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 191/400 (47%), Gaps = 44/400 (11%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
            Q     +WG  D  +LG G   S+ + PV      K     +A GG+ TLF+ ++ G +Y
Sbjct: 2788 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2845

Query: 94   ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
            A G    G+LG+ ++     EP  I  L + V++   + +G  H+ A+T DG+++ WG+ 
Sbjct: 2846 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG 2904

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             +G+LG G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLG
Sbjct: 2905 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 2962

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
            HG          + ++  P+L++ L G +V   A G     +  +  +G VY +GD    
Sbjct: 2963 HGD---------TATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFG 3013

Query: 269  KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            K+     +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+  
Sbjct: 3014 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3073

Query: 327  VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 385
             +  P  V+G   +         I+ V+ G  H  A+++ G++  WG         ++ H
Sbjct: 3074 HVRKPTLVEGLRGKK--------IIHVAVGALHCLAVTDIGQVYAWG---------DNDH 3116

Query: 386  SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
               GQ G+G  +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3117 ---GQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3153



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 64/357 (17%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQ----------E 2841

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +    P P  +  LS    K+ A+  G + ++A+T  GKV 
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 2900 SWGEGEDGKLGHGN---------SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      ++ CG     T  LT+ G +Y+WG  
Sbjct: 2951 YTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDG 3010

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTW 371
            + G LG G  D  ++P   +R+ G             +V + CG + + A+++ G++ TW
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNG-----------LGVVQIECGAQFSLALTKYGEVWTW 3059

Query: 372  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G G               +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3060 GKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 153/344 (44%), Gaps = 38/344 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3842

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 3843 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 3900

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 3901 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P LI  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 3952 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4011

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            G  D    P +++              ++ V CG + + A++  G I TWG G  H    
Sbjct: 4012 GGSDGCKIPMKIESLAG--------LGVIKVECGSQFSVALTRSGAIYTWGKGDYH---- 4059

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                    +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4060 --------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4095



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 17/245 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
           G H L LT+   VY+ G  + G+LG   N+ +  EP  I  L +K +  I+ G  +S+A+
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLG-HGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL 569

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG---FEQSVAVTGG 195
           + +GELY WG+ + G+LG G     V+ IPT V  L+G      A G     Q++ VT  
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVM-IPTLVTALNGHMVVYVACGGGRDPQTLCVTAS 628

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG G  G+LG G               TP+++ +L  + V     G   SA +  
Sbjct: 629 GIVFSWGDGNHGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA 679

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
            G VY +G     K+     +H R P +I  L     +++  G  H   LT    +Y WG
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739

Query: 314 SNENG 318
            N++G
Sbjct: 740 RNDHG 744



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N   QLG G K +K I +P   E LS +     A G +    V+  GK+ + G 
Sbjct: 2792 VYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2849

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G +S++           P+ I  L    +K  A  +G  H+  + ++G+V+ 
Sbjct: 2850 GTNGRLGLGDDSNVC---------EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFS 2900

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  E G 
Sbjct: 2901 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 2960

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILTWGWGGS 376
            LG G       P+ VQ    +         ++ ++CG +     A  ++G + +WG    
Sbjct: 2961 LGHGDTATQSKPKLVQSLVGQ--------RVIQIACGSRDAQTMALTADGLVYSWG---- 3008

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
             G F        G+LG G       P +++    +  +Q+ CG   + AL +Y
Sbjct: 3009 DGDF--------GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY 3053



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNG+ GRLG G++     P +  A  + ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 526 WGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGK 585

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTG---YHHSSAITVDGELYMWGKNSNGQLGL- 157
           LG   +    + P  ++ L    VV ++ G      +  +T  G ++ WG  ++G+LG  
Sbjct: 586 LGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRG 645

Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G K  K+      V+ L  I   +   G + S A+T  G+V +WG G   +LGHG E
Sbjct: 646 GCDGSKTPKI------VDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE 699

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P++I  L+  K+K    G LH   + E+  VY +G
Sbjct: 700 DHV---------RYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 134/339 (39%), Gaps = 62/339 (18%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           PV      +  +K L C     + L+  G VY               + Y  E  R+ G 
Sbjct: 452 PVYYDTISELGIKQLCCTERAVIILSVNGNVYM--------------MYYGSETQRVYGF 497

Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            ++ + +   +    H  A+T D  +Y WG    G+LG G         P  +E L    
Sbjct: 498 SEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTW--YDEPKLIEALVEKN 555

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               A G   S A++  G++ +WG G  G+LGHG     +          P L+  L G 
Sbjct: 556 ITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDV--------MIPTLVTALNGH 607

Query: 239 KVKIAAAG---FLHSACIDENGRVYIFGDRAVDKMLFQEGNH----------ARRPSLIS 285
            V   A G      + C+  +G V+ +GD          GNH          ++ P ++ 
Sbjct: 608 MVVYVACGGGRDPQTLCVTASGIVFSWGD----------GNHGKLGRGGCDGSKTPKIVD 657

Query: 286 KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
           KL      +V CG   +  LT+ GE+YTWG  E+  LG G+ D +  P+ +    ++   
Sbjct: 658 KLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIK 717

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWG-GSHGTFS 381
           D        +  G  H  A++E + L +GWG   HG   
Sbjct: 718 D--------LYIGHLHVLALTEDQ-LVYGWGRNDHGQID 747



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 109/248 (43%), Gaps = 40/248 (16%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG           T    P+LI+ L    +   A G  +
Sbjct: 515 LALTQDNSVYSWGNGECGRLGHGN---------MTWYDEPKLIEALVEKNITFIACGSTY 565

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLP--YSEEVVCGG---YHTC 301
           SA +  NG +Y +G     K+    GN  +    P+L++ L       V CGG     T 
Sbjct: 566 SAALSSNGELYTWGRGNYGKL--GHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTL 623

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +T+ G +++WG   +G LG G  D   +P+ V              ++  V CG + +A
Sbjct: 624 CVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLD--------INVAKVYCGQQFSA 675

Query: 362 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++  G++ TWG G  +            +LGHGN+    +P I++  +  K   +  G 
Sbjct: 676 ALTAYGEVYTWGKGEDY------------KLGHGNEDHVRYPKIIDILKTKKIKDLYIGH 723

Query: 421 NHTGALLE 428
            H  AL E
Sbjct: 724 LHVLALTE 731



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG G E + +          P L + L  ++      G      +
Sbjct: 3782 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 3832

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+VY  G  AV ++     +    P+L+  + +       V  GG H   L+S G +
Sbjct: 3833 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKI 368
            Y+WG  ++G LG G+      P+ ++        + + T IV ++CG  H+AAI S G +
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIE--------ELLGTEIVDIACGGHHSAAITSAGWL 3944

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P ++   ++ K + V+CG
Sbjct: 3945 YTWGKG------------RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 3983



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 255  ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTW 312
            ++  VY++G    D++   +G+  + P     L   + V + GG  T  V++  G+LY  
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2847

Query: 313  GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTW 371
            G   NG LG+G    +  P+ +  PF    + Q     V V  G KH  A++ +GK+ +W
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPI--PF----LSQYVIKKVAVHSGGKHALALTQDGKVFSW 2901

Query: 372  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G G       EDG     +LGHGN +    P ++   ++ +   ++CG  H+ A+
Sbjct: 2902 GEG-------EDG-----KLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI 2944



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 4/150 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G++G+LG G  +    P +       ++  + CG   +  LT  G VY  G  +  +
Sbjct: 634 WGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYK 693

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N  +   P  I  LK K++  +  G+ H  A+T D  +Y WG+N +GQ  +    
Sbjct: 694 LG-HGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQ--IDPAL 750

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             ++P PT     SG      A G  QS A
Sbjct: 751 GTIVPEPTLCPTFSGKNVIGLACGPTQSFA 780



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 23/141 (16%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           + CG  ++  L+S GELYTWG    G LG G+ D     + V  P   + ++     +V 
Sbjct: 559 IACGSTYSAALSSNGELYTWGRGNYGKLGHGNSD-----KDVMIPTLVTALNG--HMVVY 611

Query: 353 VSCG----WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           V+CG     +     + G + +WG  G+H           G+LG G       P IV+  
Sbjct: 612 VACGGGRDPQTLCVTASGIVFSWG-DGNH-----------GKLGRGGCDGSKTPKIVDKL 659

Query: 409 ENVKALQVSCGFNHTGALLEY 429
            ++   +V CG   + AL  Y
Sbjct: 660 LDINVAKVYCGQQFSAALTAY 680


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 177/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G VY+ G    G+LG   +     +P  +  L    ++ ++ G
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLVEALAHMNIELVACG 371

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +   G LG G + +  +P       L GI     + G   +
Sbjct: 372 EYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGP-LEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G  H
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSTSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVASLVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS+  G LG    D +  P RV+G   ++ V++I       
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEI------- 591

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQ 639

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 156/339 (46%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDTRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 622

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  +SP  V     E+  D+   S+V   CG   TAAI
Sbjct: 623 TDDRNSPTLV-----EALKDKQVRSVV---CGINFTAAI 653



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 129/303 (42%), Gaps = 39/303 (12%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+ +        N + G    A     +P  +E    +  +  + G   +  VT
Sbjct: 268 GDVFMWGEGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVT 327

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG    GRLGHG +  +           P+L++ L  + +++ A G  H+  +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLVEALAHMNIELVACGEYHTCAV 378

Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G+   +  L   GN   H     L   L   +   + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-----TSIVLVSCGWKHTAAI 363
           L+T+G    G LG G    L  P  V+       V   C      ++V V  G   T+  
Sbjct: 439 LFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNC 498

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           S GKI TWG G              G+LGHG+    + PT V         QV+CG   T
Sbjct: 499 SSGKIFTWGDGDK------------GRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFT 546

Query: 424 GAL 426
            AL
Sbjct: 547 VAL 549



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 33/211 (15%)

Query: 231 LIKELE---GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           L K LE    + V+  + G  H+  + + G VY +G+ +  ++         +P L+  L
Sbjct: 301 LPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEAL 360

Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI----DVLH-SPERVQGPFSE 340
            +   E V CG YHTC +T  G+LYTWG   NG    G +    +V H  P+R+ GP   
Sbjct: 361 AHMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFGLLGHGNEVSHWMPKRLNGPLEG 417

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             V  I       SCG  HTA + S G++ T+G G            S G LGHG+    
Sbjct: 418 IHVSSI-------SCGPWHTAVVTSAGQLFTFGDG------------SFGVLGHGDRQSL 458

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
             P  V   + ++ ++ +CG  HT A++E +
Sbjct: 459 SVPREVESLKGLRTVRAACGVWHTAAVVEVM 489


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 154/339 (45%), Gaps = 40/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++     N   RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 329 GQL--GNPNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGD 386

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           ++    P  V+             ++  ++CG   TAAI
Sbjct: 387 VEDRKVPTTVEALRDR--------AVRHIACGANFTAAI 417



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 163/371 (43%), Gaps = 59/371 (15%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAASNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGNVKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCG 356
             T  LT+ G+++T G++  G LG  + D    P  V+        D+I +  VL ++CG
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLGNPNSD--GRPCLVE--------DKIASEHVLQIACG 358

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   PT V    +     
Sbjct: 359 SYHVAVLTSRSEVFTWGKGAN------------GRLGHGDVEDRKVPTTVEALRDRAVRH 406

Query: 416 VSCGFNHTGAL 426
           ++CG N T A+
Sbjct: 407 IACGANFTAAI 417



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L  S  + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
            R+ GP            I  VSCG  HTA I S G++ T+G G            S G 
Sbjct: 175 RRISGPLEG-------LQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 180/377 (47%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G ++  G    G+LG  +  ++   L+P  +  L    ++ +S
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDV---LQPKLVDALGNTNIELVS 366

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  IP   K+   L GI     A G 
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP--KKINGPLEGIHVSSIACGP 424

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 425 WHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVT---------MPREVESLKGLRTVRAACG 475

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 476 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKETKLVPTCVAALVDPNF 533

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
             V CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V++I    
Sbjct: 534 CRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPVRVEGKLSKSFVEEI---- 588

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   +
Sbjct: 589 ---ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALK 633

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   ++CG N T A+
Sbjct: 634 DKQVKSIACGTNFTAAI 650



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 157/347 (45%), Gaps = 54/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ ++CG  HT  +T +G +Y    G  +F
Sbjct: 332 WGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNF 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P +I+G  +   V  I+ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 392 GLLGHGNEVSHWI-PKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 451 DRGS--VTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 508

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        + G   +  +  +G VY  G   
Sbjct: 509 GRLGHGDKETKL---------VPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGS-- 557

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 558 --PVYGQLGN----PHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 611

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG G  D  +SP  V     E+  D+   SI   +CG   TAAI
Sbjct: 612 NGRLGHGDTDDRNSPTLV-----EALKDKQVKSI---ACGTNFTAAI 650



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 122/278 (43%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G   +  VT  G++ +WG    GRLGHG +S +L        
Sbjct: 298 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVL-------- 349

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+L+  L    +++ + G  H+  +  +G +Y +GD   +  L   GN      P  I
Sbjct: 350 -QPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKI 408

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  V+      
Sbjct: 409 NGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVES----- 463

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GK+ TWG G              
Sbjct: 464 -LKGLRT--VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------ 508

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V    +    +VSCG + T AL
Sbjct: 509 GRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVAL 546



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +   +P L+  L 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+++ GP     V
Sbjct: 359 NTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWIPKKINGPLEGIHV 417

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       +CG  HTA + S G++ T+G     GTF        G LGHG+      P
Sbjct: 418 SSI-------ACGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRGSVTMP 458

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 459 REVESLKGLRTVRAACGVWHTAAVVEVM 486


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 162/346 (46%), Gaps = 50/346 (14%)

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           TG V+      FG+   ++N      P +    + +V+ IS G  H+S +  DG ++ +G
Sbjct: 1   TGAVFT-----FGKSKFADNA-----PSKFWIREDKVLHISCGDEHTSLLAGDGRVFTFG 50

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N+ GQLGLG    K +  PT+++ L      Q A G   ++  T  GK+ S+G     +
Sbjct: 51  DNAWGQLGLGH--TKPVTKPTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQ 108

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG G        L      +P +IK LE   VK+ +AG  HS  + + G VY++G     
Sbjct: 109 LGLG--------LDDEKVCSPTVIKGLESHAVKMLSAGMYHSCVLTDKGSVYLWGGGEEG 160

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           ++ F  G    +     +L   +EVVC   G YHT ++T+GG+L T+G  + G LG GS 
Sbjct: 161 QLGF--GEDVTKHETPERLDVDDEVVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSD 218

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 385
              +   +V        VD I   +V V+CG  HT AI+   + T+G G S         
Sbjct: 219 TGDNCLPKV--------VDGIEGHVVSVACGGAHTVAITGWLVYTFGNGSS--------- 261

Query: 386 SSGGQLGHGN---DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              GQLGHGN     D  H  +  + +  K    SCG NHT  + +
Sbjct: 262 ---GQLGHGNMLLQADTPHKIV--WQKPTKVRSASCGENHTALVTD 302



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 179/392 (45%), Gaps = 47/392 (11%)

Query: 7   TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
            A +K+++++D  L    G     + +   R F   +G+  +G+LGLG  +   +P    
Sbjct: 15  NAPSKFWIREDKVLHISCGDEHTSLLAGDGRVFT--FGDNAWGQLGLGHTKPVTKPTRIK 72

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
           + +   +  +ACG +HTL  TE+G +Y+ G N+  QLG+  +      P  I GL+   V
Sbjct: 73  SLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAV 132

Query: 127 Q-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-----VIPIPTKVECLSGIFTK 180
           + +S G +HS  +T  G +Y+WG    GQLG G+   K      + +  +V C+      
Sbjct: 133 KMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEVVCI------ 186

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             A G+  +  VT GGK+L++G    G+LG G ++             P+++  +EG  V
Sbjct: 187 --ACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTG--------DNCLPKVVDGIEGHVV 236

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDK-----MLFQEGNHARRPSLI--SKLPYSEEV 293
            +A  G  H+  I     VY FG+ +  +     ML Q    A  P  I   K       
Sbjct: 237 SVACGG-AHTVAI-TGWLVYTFGNGSSGQLGHGNMLLQ----ADTPHKIVWQKPTKVRSA 290

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESPVDQICTSIVL 352
            CG  HT ++T  G+L+T G   +G L +G  +  +  +      FS+  V+Q       
Sbjct: 291 SCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQ------- 343

Query: 353 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
           VSCG  HT A   GK        +H +  E+G
Sbjct: 344 VSCGGCHTLAT--GKPSLQNGNAAHDSSDEEG 373


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 177/389 (45%), Gaps = 52/389 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+L +R  PV         +  +A G  H+L L   G V+A G ND GQ
Sbjct: 118 WGRNDDGQLGDGTLSTRGDPVQVQGLS--GVTTVALGATHSLALCYDGSVWAWGANDHGQ 175

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +I     P  ++GL+ EVV ++ G +HS A+  DG ++ WG+N +GQLG G    
Sbjct: 176 LGDGTSIARR-TPQMVAGLQ-EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVT 233

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+P  ++ LSGI     A G   S+A+   G V +WG+  SG+LG G          
Sbjct: 234 RRVPVP--IQGLSGIVA--VASGTSHSLALRYDGNVWAWGSNYSGQLGDGS--------- 280

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           S S  +P  + EL G+ V +   G  +S  +  +G V+ +G     ++   +G    R  
Sbjct: 281 SLSRSSPVQVTELSGI-VSV-EGGPDYSMAVRYDGTVWTWGINTYGQL--GDGTTIARSV 336

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P   S L     V  G  H   + +   ++ WG N NG  G  S  V  SP         
Sbjct: 337 PVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPR-------- 388

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                I   +V ++    H+ A+ S+G +  W WG ++           GQLG G   + 
Sbjct: 389 ----TILNEVVTMAATNDHSLAVRSDGGL--WAWGANN----------EGQLGDGTTKNR 432

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
             P  V  G  V    V+ G  H+ A+ +
Sbjct: 433 WAPAEV-LGNVVS---VAAGRRHSLAVRD 457



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 161/366 (43%), Gaps = 46/366 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG GS  SR  PV  +  E   + ++  G  +++ +   G V+  G+N +GQ
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVT--ELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQ 325

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S+ P++ SGL   VV ++ G  H+ A+  +  ++ WG N NGQ G   ++ 
Sbjct: 326 LGDGTTIARSV-PVQTSGLSG-VVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSV 383

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P     E ++   T       + S+AV   G + +WGA   G+LG G          
Sbjct: 384 YFSPRTILNEVVTMAATN------DHSLAVRSDGGLWAWGANNEGQLGDGT--------- 428

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + + + P    E+ G  V + AAG  HS  + ++G ++ +G   V ++    G+    P 
Sbjct: 429 TKNRWAP---AEVLGNVVSV-AAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM 484

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +     V  G  ++  L     L+ WG N  G LG G+    H P RVQG      
Sbjct: 485 QVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQG------ 538

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                + IV ++ G  H  A+ S G +  W            G +S GQLG G  ++   
Sbjct: 539 ----LSGIVAIATGNGHMLAVRSNGTVWAW------------GDNSSGQLGDGTTINRAT 582

Query: 402 PTIVNF 407
           P  V  
Sbjct: 583 PVQVQV 588



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 38/353 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G+ ++RW P    A    ++ ++A G  H+L + + G ++A G N  GQ
Sbjct: 416 WGANNEGQLGDGTTKNRWAP----AEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQ 471

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+++ G+   +  ++ G  +S A+  D  L+ WG+NS GQLG G    
Sbjct: 472 LGDGTGSSRTI-PMQVPGISG-IASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVN 529

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   +PT+V+ LSGI     A G    +AV   G V +WG   SG+LG G          
Sbjct: 530 R--HVPTRVQGLSGIVA--IATGNGHMLAVRSNGTVWAWGDNSSGQLGDGT--------- 576

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +  TP  ++ L    +   AAG  HS  +  +G ++ +G     ++    G     P+
Sbjct: 577 TINRATPVQVQVLS--GIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPT 634

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +  +  V    +H+  + + G L+ WG+N  G LG    +   +P +V    + + 
Sbjct: 635 QVQGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTPSKVT---TLTG 691

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           V +   +    S G+ H+ A+ S+G ++ W            GH++ GQLG G
Sbjct: 692 VTEAVGTFGY-SIGFGHSLALRSDGYLVGW------------GHNTYGQLGTG 731



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 144/311 (46%), Gaps = 38/311 (12%)

Query: 68  FEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK 123
           F   S +A   +A    ++L +   G V+  G        +S N  Y  + P ++ GL  
Sbjct: 41  FTLQSAQARDRIAASSMNSLAIRSDGTVWTVGTRY-----VSANGWYRQDWPGQLPGLSG 95

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            +V I +G   S A+  DG ++ WG+N +GQLG G  + +  P+  +V+ LSG+ T   A
Sbjct: 96  -MVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPV--QVQGLSGVTT--VA 150

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           LG   S+A+   G V +WGA   G+LG G          S +  TP+++  L+  +V   
Sbjct: 151 LGATHSLALCYDGSVWAWGANDHGQLGDGT---------SIARRTPQMVAGLQ--EVVAV 199

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCV 302
           AAG  HS  +  +G V+ +G+   D  L       RR P  I  L     V  G  H+  
Sbjct: 200 AAGANHSLAVLSDGTVWAWGEN-YDGQLGDGTTVTRRVPVPIQGLSGIVAVASGTSHSLA 258

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           L   G ++ WGSN +G LG GS     SP +V             + IV V  G  ++ A
Sbjct: 259 LRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQV----------TELSGIVSVEGGPDYSMA 308

Query: 363 IS-EGKILTWG 372
           +  +G + TWG
Sbjct: 309 VRYDGTVWTWG 319



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 10/179 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV           A     AH+L +   G ++A G+N+  Q
Sbjct: 564 WGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGA--AHSLAVRYDGTLWAWGINNTSQ 621

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   L P ++ G+   V  +S   HHS A+  DG L+ WG N+ GQLG  +   
Sbjct: 622 LGDGTGI-PRLVPTQVQGIGSAVA-VSAAKHHSLAVLADGTLWDWGANNYGQLG--RNQD 677

Query: 163 KVIPIPTKVECLSGIF----TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              P P+KV  L+G+     T   ++GF  S+A+   G ++ WG    G+LG G   +I
Sbjct: 678 NTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPENI 736



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +  +LG G+   R  P         S  A++    H+L +   G ++  G N++GQ
Sbjct: 614 WGINNTSQLGDGTGIPRLVPTQVQGI--GSAVAVSAAKHHSLAVLADGTLWDWGANNYGQ 671

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIST-----GYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG +++   +  P +++ L      + T     G+ HS A+  DG L  WG N+ GQLG 
Sbjct: 672 LGRNQD-NTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGT 730

Query: 158 GKKAAKVIPIP 168
           G    + IP+P
Sbjct: 731 G--VPENIPVP 739


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 160/345 (46%), Gaps = 35/345 (10%)

Query: 89  TGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           +G +Y+ G N +G+LG  ++I  + L  + + G   ++ Q+ +G    + +T +G +   
Sbjct: 327 SGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWD-DIRQVVSGNETLAVLTNEGVVLTC 385

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
           G N +GQ G G    +V+ +   V+ L     K   A+ G E  +A+T  G   SWG   
Sbjct: 386 GLNKSGQCGQGHFDERVMML-RPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH           +T  + P+LI+ L+  K+  A+  + HSA I + G +Y FG  
Sbjct: 445 RGQLGHEN--------LATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMN 496

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++      H   P L+  L  +E   V CG YHT + T+ GEL+T G N+ G LG+ 
Sbjct: 497 DCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLA 556

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
               +  P  V  P            +  V+CG+ H+  +S         GG   +F   
Sbjct: 557 HNRQIKLPTLVALPNE---------MVSFVACGYYHSVVVST--------GGRAFSF--- 596

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G +  GQLG G+ V    P +V    N + ++ +CG  HT  L E
Sbjct: 597 GRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSE 641



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 172/397 (43%), Gaps = 46/397 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G    R +    S      ++ +  G      LT  G V   GLN  GQ 
Sbjct: 334 GQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQC 393

Query: 104 G---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G     E +   L P++ +   + + +  S G  H  A+T  G  Y WG N  GQLG   
Sbjct: 394 GQGHFDERV-MMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHEN 452

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
            A K I +P  +E L       A++ +  S  +T  G++ ++G    G+LG  H Q  S 
Sbjct: 453 LATK-IHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQS- 510

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                     TP+L+K LE  +V + A G  H+      G ++  G     ++       
Sbjct: 511 ----------TPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQ 560

Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            + P+L++ LP      V CG YH+ V+++GG  +++G N+ G LGIGS    + P  V 
Sbjct: 561 IKLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVA 619

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
              S +      T +V  +CG  HT  +SE G++  +            G ++ GQLG+ 
Sbjct: 620 --LSSN------TRMVRATCGCYHTVLLSEQGQVYVF------------GRNNKGQLGNR 659

Query: 395 NDVDYIHPTIVNF---GENVKALQVSCGFNHTGALLE 428
              D + P  +       + + + V+ GF  T  ++E
Sbjct: 660 GSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVE 696



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 144/327 (44%), Gaps = 27/327 (8%)

Query: 49  GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G+ G G  + R    RPV     ++    A + G  H + LT+TG  Y+ G ND GQLG 
Sbjct: 391 GQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLG- 449

Query: 106 SENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
            EN+   +  P  I  LK K++   S  YHHS+ IT  GELY +G N  GQLGL     +
Sbjct: 450 HENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQ 509

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P  V+ L        A G   ++  T  G++ + G    G+LG      I      
Sbjct: 510 --STPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQI------ 561

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
                P L+  L    V   A G+ HS  +   GR + FG     ++      H   P++
Sbjct: 562 ---KLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNV 617

Query: 284 ISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE 340
           ++    +  V   CG YHT +L+  G++Y +G N  G LG  GS D L     +  P   
Sbjct: 618 VALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADAL-----LPVPLKV 672

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGK 367
            P ++     V V+ G+  T+ I E K
Sbjct: 673 RP-EKNSRRCVDVAAGFYTTSLIVERK 698



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 1   MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
           M+ R + A+      Q +K  +    C+  I+ T     A  WG  D G+LG  +L ++ 
Sbjct: 403 MMLRPVQALRS----QRVKFIAASNGCEHMIALT-DTGLAYSWGYNDRGQLGHENLATKI 457

Query: 61  R-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
             P +  + +   L   +    H+  +T+ G +Y  G+ND GQLG+      S   L  S
Sbjct: 458 HVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKS 517

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
               EV  ++ G +H+   T  GEL+  GKN  GQLGL     + I +PT V  L     
Sbjct: 518 LEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN--RQIKLPTLV-ALPNEMV 574

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
              A G+  SV V+ GG+  S+G    G+LG G +           +  P ++      +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK---------VHQNVPNVVALSSNTR 625

Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
           +  A  G  H+  + E G+VY+FG
Sbjct: 626 MVRATCGCYHTVLLSEQGQVYVFG 649



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           + ST  R F+  +G  DYG+LG+GS   +  P V +      +    CG  HT+ L+E G
Sbjct: 586 VVSTGGRAFS--FGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQG 643

Query: 91  CVYATGLNDFGQLGISENIGYSLE-PLRISGLK--KEVVQISTGYHHSSAITV------D 141
            VY  G N+ GQLG   +    L  PL++   K  +  V ++ G++ +S I        D
Sbjct: 644 QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDD 703

Query: 142 GELYMWGKN 150
           G++ M  ++
Sbjct: 704 GDVIMLDQS 712


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 181/378 (47%), Gaps = 55/378 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 354 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 412

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 413 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 470

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 471 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 521

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 522 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 579

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V++I   
Sbjct: 580 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEI--- 635

Query: 350 IVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
               SCG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   
Sbjct: 636 ----SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVESL 679

Query: 409 ENVKALQVSCGFNHTGAL 426
           ++ +   V CG N T A+
Sbjct: 680 KDKQVRTVVCGINFTAAI 697



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 155/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 379 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 438

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 439 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 497

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 498 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 555

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 556 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 606

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 607 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 666

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D   SP  V     ES  D+   ++V   CG   TAAI
Sbjct: 667 TDDRSSPTLV-----ESLKDKQVRTVV---CGINFTAAI 697



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           IP  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 345 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 395

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +G+   +  L   GN      P  +
Sbjct: 396 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 455

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 456 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVES----- 510

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 511 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 555

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         Q++CG   T AL
Sbjct: 556 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVAL 593



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP      
Sbjct: 406 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEG--- 461

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 +  +SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 462 ----IHVSAISCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVP 505

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 506 REVESLKGLRTVRAACGVWHTAAVVEVM 533


>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
 gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
          Length = 837

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 166/404 (41%), Gaps = 48/404 (11%)

Query: 28  KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
            R   + LQ R A  WG    G+LG G+ E R  PV  S     +  +LA G  HT  L 
Sbjct: 435 DRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGLSGAT--SLAAGDGHTCALM 492

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
                   G N  GQLG        L P+ +SGL      ++ G  H+ A+     +  W
Sbjct: 493 NVRTAQCWGRNSSGQLG-DGTTERRLTPVTVSGLSAATA-LAAGDSHTCALLDTRRVRCW 550

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+NS+GQLG G +  +V P+   V  LSG      A G   +  +   G V  WG   SG
Sbjct: 551 GRNSSGQLGDGTRTDRVTPV--AVSGLSGA--TALAAGNSHTCTLLDTGTVQCWGWNSSG 606

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G           T   TP  +  L GV     AAG  H+  + ++G V  +G  + 
Sbjct: 607 QLGDGTR---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSS 655

Query: 268 DKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++   +G    R  P+ +S L     +  G  HTC L   G +  WG N +G LG G+ 
Sbjct: 656 GQL--GDGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTT 713

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 384
               +P  V G           + +  +  G  HT A+   G +  WG            
Sbjct: 714 TDRVTPAAVSG----------LSGVTALVAGANHTCALMPTGTVQCWG------------ 751

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +  GQLG G   D + P  V+    + AL  + G  HT A+L 
Sbjct: 752 KNEFGQLGDGTTTDRLTPVAVSGLSGITAL--AAGSEHTCAVLN 793



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 167/398 (41%), Gaps = 50/398 (12%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           LQ      WG  ++G+LG G+ E R  PVV S     +  AL  G  HT  + +T     
Sbjct: 392 LQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLSGAT--ALTAGDRHTCAVLQTRTAQC 449

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG        L P+ +SGL      ++ G  H+ A+        WG+NS+GQ
Sbjct: 450 WGENSPGQLG-DGTTERRLTPVTVSGLSG-ATSLAAGDGHTCALMNVRTAQCWGRNSSGQ 507

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           LG G    ++ P+      +SG+    A A G   + A+    +V  WG   SG+LG G 
Sbjct: 508 LGDGTTERRLTPVT-----VSGLSAATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGT 562

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                     T   TP  +  L G      AAG  H+  + + G V  +G  +  ++   
Sbjct: 563 R---------TDRVTPVAVSGLSGATAL--AAGNSHTCTLLDTGTVQCWGWNSSGQL--G 609

Query: 274 EGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           +G    R  P+ +S L     +  G  HTC L   G +  WG N +G LG G+     +P
Sbjct: 610 DGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTP 669

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             V G           + +  ++ G  HT A+ + G +  WG             +S GQ
Sbjct: 670 AAVSG----------LSGVTALAAGANHTCALMDSGTVQCWG------------RNSSGQ 707

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           LG G   D + P  V+    V AL    G NHT AL+ 
Sbjct: 708 LGDGTTTDRVTPAAVSGLSGVTALVA--GANHTCALMP 743



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 146/339 (43%), Gaps = 30/339 (8%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           +  R A  WG    G+LG G+ E R  PV  S     +  ALA G +HT  L +T  V  
Sbjct: 492 MNVRTAQCWGRNSSGQLGDGTTERRLTPVTVSGLSAAT--ALAAGDSHTCALLDTRRVRC 549

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG        + P+ +SGL      ++ G  H+  +   G +  WG NS+GQ
Sbjct: 550 WGRNSSGQLGDGTRTDR-VTPVAVSGLSGATA-LAAGNSHTCTLLDTGTVQCWGWNSSGQ 607

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +  +V P    V  LSG+     A G   + A+   G V  WG   SG+LG G  
Sbjct: 608 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTR 663

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                    T   TP  +  L GV     AAG  H+  + ++G V  +G  +  ++    
Sbjct: 664 ---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSSGQLGDGT 712

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                 P+ +S L     +V G  HTC L   G +  WG NE G LG G+     +P  V
Sbjct: 713 TTDRVTPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAV 772

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
            G           + I  ++ G +HT A+ + G    WG
Sbjct: 773 SG----------LSGITALAAGSEHTCAVLNTGAARCWG 801



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 165/388 (42%), Gaps = 46/388 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  S      + ALA G  HT  L  TG V   GLN  GQ
Sbjct: 100 WGWNGSGQLGDGTTTDRAMPVAVSGLS--GVTALAAGRYHTCALLNTGTVQCWGLNSSGQ 157

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   + P+ +SGL   V+ ++ G  H+ A+     +  WG+N +GQLG G    
Sbjct: 158 LG-DWTITNRVTPVAVSGLSG-VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTND 215

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  LSG+     A G   + A    G V  WG  G+G+LG G          
Sbjct: 216 RWTPV--AVSGLSGV--TALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTR-------- 263

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            TS  TP  +  L G      AAGF H+  + + G V  +G  +  ++   +G   RR  
Sbjct: 264 -TSRLTPMAVSGLSGATAL--AAGFEHTCALLDTGTVRCWGLNSSGQL--GDGTTERRLT 318

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     +  G +HTC +     +  WG N +G LG G+ +   +P  V G    
Sbjct: 319 PVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSG---- 374

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                +  S  L + G    A +  G +  W            G +  GQLG G     +
Sbjct: 375 -----LSGSTALAAGGVHTCALLQTGTVQCW------------GRNEFGQLGDGTTERRL 417

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLE 428
            P +V+      AL  + G  HT A+L+
Sbjct: 418 TPVVVSGLSGATAL--TAGDRHTCAVLQ 443



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 170/403 (42%), Gaps = 46/403 (11%)

Query: 28  KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
            R   + L  R    WG  ++G+LG G+   RW PV  S      + ALA GG HT    
Sbjct: 185 DRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS--GVTALAAGGRHTCAAL 242

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
            TG V   G N  GQLG        L P+ +SGL      ++ G+ H+ A+   G +  W
Sbjct: 243 NTGTVQCWGGNGAGQLGDGTRTSR-LTPMAVSGLSGATA-LAAGFEHTCALLDTGTVRCW 300

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G NS+GQLG G    ++ P+   V  LSG+ T  AA  F  + AV     V  WG   SG
Sbjct: 301 GLNSSGQLGDGTTERRLTPV--AVSGLSGV-TALAAGDF-HTCAVLQTETVQCWGLNSSG 356

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G     L         TP  +  L G      AAG +H+  + + G V  +G    
Sbjct: 357 QLGDGTTERRL---------TPVSVSGLSGSTAL--AAGGVHTCALLQTGTVQCWGRNEF 405

Query: 268 DKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++   +G   RR  P ++S L  +  +  G  HTC +        WG N  G LG G+ 
Sbjct: 406 GQL--GDGTTERRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTT 463

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 385
           +   +P  V G    +           ++ G  HT A+   +           T    G 
Sbjct: 464 ERRLTPVTVSGLSGATS----------LAAGDGHTCALMNVR-----------TAQCWGR 502

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           +S GQLG G     + P  V+      AL  + G +HT ALL+
Sbjct: 503 NSSGQLGDGTTERRLTPVTVSGLSAATAL--AAGDSHTCALLD 543



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 128/300 (42%), Gaps = 19/300 (6%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           L  R    WG    G+LG G+   R  PV  S     +  ALA G +HT  L +TG V  
Sbjct: 542 LDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSGAT--ALAAGNSHTCTLLDTGTVQC 599

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG        + P  +SGL   V  ++ G +H+ A+   G +  WG+NS+GQ
Sbjct: 600 WGWNSSGQLGDGTRTDR-VTPAAVSGLSG-VTALAAGANHTCALMDSGTVQCWGRNSSGQ 657

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +  +V P    V  LSG+     A G   + A+   G V  WG   SG+LG G  
Sbjct: 658 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGT- 712

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   +T   TP  +  L GV   +A A   H+  +   G V  +G     ++    
Sbjct: 713 --------TTDRVTPAAVSGLSGVTALVAGAN--HTCALMPTGTVQCWGKNEFGQLGDGT 762

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                 P  +S L     +  G  HTC + + G    WG N  G LGI  +D    P  V
Sbjct: 763 TTDRLTPVAVSGLSGITALAAGSEHTCAVLNTGAARCWGRNLFGRLGISPLDYSPLPRTV 822



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 166/389 (42%), Gaps = 46/389 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  ++ +R  PV  S      + ALA G  HT  L +T  V   G N+ GQ
Sbjct: 150 WGLNSSGQLGDWTITNRVTPVAVSGLS--GVIALAAGDRHTCALLDTRTVRCWGENEHGQ 207

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P+ +SGL   V  ++ G  H+ A    G +  WG N  GQLG G + +
Sbjct: 208 LG-DGTTNDRWTPVAVSGLSG-VTALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTRTS 265

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+   V  LSG      A GFE + A+   G V  WG   SG+LG G     L    
Sbjct: 266 RLTPM--AVSGLSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRL---- 317

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
                TP  +  L GV     AAG  H+  + +   V  +G  +  ++   +G   RR  
Sbjct: 318 -----TPVAVSGLSGVTAL--AAGDFHTCAVLQTETVQCWGLNSSGQL--GDGTTERRLT 368

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L  S  +  GG HTC L   G +  WG NE G LG G+ +   +P  V G    
Sbjct: 369 PVSVSGLSGSTALAAGGVHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSG---- 424

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                  +    ++ G +HT A+ + +           T    G +S GQLG G     +
Sbjct: 425 ------LSGATALTAGDRHTCAVLQTR-----------TAQCWGENSPGQLGDGTTERRL 467

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLEY 429
            P  V+      +L  + G  HT AL+  
Sbjct: 468 TPVTVSGLSGATSL--AAGDGHTCALMNV 494



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 173/419 (41%), Gaps = 64/419 (15%)

Query: 15  KQDIKLGSKL--GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           K+ +KL   L  G+   WI ST           G  GRL     ++   P+  S      
Sbjct: 34  KRPVKLDRYLYPGVAHTWIDST-----------GSEGRLMTNPGKAPASPLPLS-----R 77

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + ALA G  HT  L  TG V+  G N  GQLG       ++ P+ +SGL   V  ++ G 
Sbjct: 78  VIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAM-PVAVSGLSG-VTALAAGR 135

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +H+ A+   G +  WG NS+GQLG      +V P+   V  LSG+    A  G   + A+
Sbjct: 136 YHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPV--AVSGLSGVIALAA--GDRHTCAL 191

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
                V  WG    G+LG G          +   +TP  +  L GV     AAG  H+  
Sbjct: 192 LDTRTVRCWGENEHGQLGDGT---------TNDRWTPVAVSGLSGVTAL--AAGGRHTCA 240

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
               G V  +G     ++   +G    R  P  +S L  +  +  G  HTC L   G + 
Sbjct: 241 ALNTGTVQCWGGNGAGQL--GDGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVR 298

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-IL 369
            WG N +G LG G+ +   +P  V G           + +  ++ G  HT A+ + + + 
Sbjct: 299 CWGLNSSGQLGDGTTERRLTPVAVSG----------LSGVTALAAGDFHTCAVLQTETVQ 348

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            WG             +S GQLG G     + P  V+      AL  + G  HT ALL+
Sbjct: 349 CWGL------------NSSGQLGDGTTERRLTPVSVSGLSGSTAL--AAGGVHTCALLQ 393


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 158/315 (50%), Gaps = 33/315 (10%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           L+  A G  H+L L   G +++ G N  GQLG  + +     P RI  L    V  +S G
Sbjct: 25  LRQAASGERHSLLLLSNGELHSCGDNSQGQLG-RKGVQRDEHPKRIRTLDNLRVDLVSCG 83

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+   ++  IPTK++ L+GI   Q + G   S+A
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLGVGE-FKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++ GG+V SWG+   G+LG G+E          S+ +P+ ++ L+G+ +   AAG  HS 
Sbjct: 143 LSEGGQVFSWGSNSHGQLGLGKECP--------SQASPQRVRSLDGIPLTQVAAGGAHSF 194

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVL 303
            +  +G  + +G     ++  ++ N    + +P  I  L      Y   + CG  HT VL
Sbjct: 195 ALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIY---ISCGYEHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA- 362
           T  G+++T+G N  G LG         P+ V+G      +D + + I    CG  HT A 
Sbjct: 252 TQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEG------IDGLVSQI---DCGSYHTLAY 302

Query: 363 -ISEGKILTWGWGGS 376
             + GK++++G G S
Sbjct: 303 VYTTGKVVSFGRGPS 317



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 149/309 (48%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  +GEL+  G NS GQ  LG+K  +    P ++  L  +     +
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSCGDNSQGQ--LGRKGVQRDEHPKRIRTLDNLRVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I           P  IK L G+K+   
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEI--------NLIPTKIKTLTGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + E G+V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLT-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   ++ +SCG++H
Sbjct: 193 SFALSLSGASFGWGSNNAGQLALRQNNV---PVQSHKPRSIGALKNL--GVIYISCGYEH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G G S+           GQLGH    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQTGKVFTFG-GNSY-----------GQLGHSPTAEKEGPQLV---EGIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG   ++    P      +   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+ E    +L P +I  L   +++Q+S G++HS A++  G+++ WG NS+GQLGLGK+  
Sbjct: 108 GVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L   Q +       
Sbjct: 168 SQAS-PQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNV------ 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + PR I  L+ + V   + G+ H+A + + G+V+ FG  +  ++          P 
Sbjct: 221 PVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
           L+  +     ++ CG YHT   V T+G
Sbjct: 281 LVEGIDGLVSQIDCGSYHTLAYVYTTG 307



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E    P          +  ++CG  H+L L+E G V++ 
Sbjct: 95  RVFA--WGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L    + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 153 GSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L +     +P+    P  +  L  +     + G+E +  +T  GKV ++G    G+LG
Sbjct: 213 LALRQNN---VPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           H   +   G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 HSPTAEKEG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  +G+LGLG    S+  P    + +   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 152 WGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAG 211

Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL + +N     S +P  I  LK   V+ IS GY H++ +T  G+++ +G NS GQLG  
Sbjct: 212 QLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
             A K    P  VE + G+ ++     +     V   GKV+S+G G S
Sbjct: 272 PTAEK--EGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFGRGPS 317



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 39/258 (15%)

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +QAA G   S+ +   G++ S G    G+LG        G  R      P+ I+ L+ ++
Sbjct: 26  RQAASGERHSLLLLSNGELHSCGDNSQGQLGRK------GVQRDEH---PKRIRTLDNLR 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
           V + + G  HS  +   GRV+ +G  +  ++    F+E N    P+ I  L   +  +V 
Sbjct: 77  VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLI--PTKIKTLTGIKIIQVS 134

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG YH+  L+ GG++++WGSN +G LG+G       SP+RV+       +D I   +  V
Sbjct: 135 CGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRS------LDGI--PLTQV 186

Query: 354 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG---HGNDVDYIHPTIVNFGEN 410
           + G  H+ A+S     ++GWG ++           GQL    +   V    P  +   +N
Sbjct: 187 AAGGAHSFALSLSGA-SFGWGSNN----------AGQLALRQNNVPVQSHKPRSIGALKN 235

Query: 411 VKALQVSCGFNHTGALLE 428
           +  + +SCG+ HT  L +
Sbjct: 236 LGVIYISCGYEHTAVLTQ 253


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 162/357 (45%), Gaps = 36/357 (10%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG    G+LG+G      + P  C+ F    LK + CGG H++FL   G VY  G N  G
Sbjct: 4   WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG ++     + P  +  L  +++  +S G  HS A+   G+++ WG    GQLGLG  
Sbjct: 64  QLGHNKP---GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTT 120

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              V  IP  ++ L      Q   G +  +A++  G++ +WG   SG+LG G+       
Sbjct: 121 ETAV-RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEP---- 175

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S+  P+ +K L G+ +    AG  HS  +  +G V+ +G     ++   +      
Sbjct: 176 ----SKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV 231

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I K   S++VV   CG  HT  LT  G L+T+G    G LG GS      P RV   
Sbjct: 232 PCHI-KFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRV--- 287

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                ++ + T +  ++CG  HT A          +  S G     G +S GQLG G
Sbjct: 288 -----LELMGTEVSQITCGRHHTLA----------FAPSSGGVYAFGCNSHGQLGTG 329



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 149/332 (44%), Gaps = 39/332 (11%)

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLGI        EP   +    + + +I  G  HS  +  DG +Y  G NS GQLG  K
Sbjct: 10  GQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNK 69

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V  L        + G   S+AV   G+V +WGAG  G+LG G       
Sbjct: 70  PGIT----PEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE---- 121

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T+   PRLIK L   ++     G  H   + ++G+++ +G     ++   +G  ++
Sbjct: 122 ----TAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSK 177

Query: 280 R-PSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P  +  L   P ++ +  GG H+  L+  G ++ WG N+ G LG+  I     P  ++
Sbjct: 178 LFPQPLKSLAGIPLAK-ITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIK 236

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
              S+         +V +SCG +HTAA++ +G + T+G G            S GQLGHG
Sbjct: 237 FLRSQK--------VVHISCGEEHTAALTKDGGLFTFGDG------------SWGQLGHG 276

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +  + + P  V      +  Q++CG +HT A 
Sbjct: 277 STANELLPRRVLELMGTEVSQITCGRHHTLAF 308



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 35/284 (12%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WGK  +GQLG+G +   +   P      +G   K+   G + SV +   G V + G+   
Sbjct: 4   WGKAKDGQLGIGVERNPMFE-PRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSC 62

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +              TP  +  L+  K+ + + G  HS  ++E G+V+ +G   
Sbjct: 63  GQLGHNKPG-----------ITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGE 111

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P LI +L      +V+CG  H   L+  G+L+TWG N +G LG+G
Sbjct: 112 EGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLG 171

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 382
             +    P ++   F +         +  ++ G  H+ A+S  G +  WG          
Sbjct: 172 KGE----PSKL---FPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWG---------- 214

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              +  GQLG  +  D   P  + F  + K + +SCG  HT AL
Sbjct: 215 --KNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAAL 256



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 3/136 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL  ++ R  P          +  ++CG  HT  LT+ G ++  G   +GQ
Sbjct: 213 WGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQ 272

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
           LG   +    L P R+  L   EV QI+ G HH+ A     G +Y +G NS+GQLG G  
Sbjct: 273 LG-HGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVL 331

Query: 161 AAKVIPIPTKVECLSG 176
           +A   P P K   LSG
Sbjct: 332 SADKSPYPLKTSFLSG 347


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 173/375 (46%), Gaps = 41/375 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E      P      +   +  + CG +HTLFLT+ G +YA G ND 
Sbjct: 6   WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65

Query: 101 GQLGISENIGYSLEPL-----RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQ 154
           GQLG   +   +  P      R++ L+  ++  IS G  HS A+T  G+++ WG N+ GQ
Sbjct: 66  GQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 125

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG   +  +  P P  ++ +      Q A G    +A+T  G++ +WG+   G+LG G  
Sbjct: 126 LGHDAENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 184

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S  +          P LI+ L GV +   A G  HS  + ++G ++ +G     ++   +
Sbjct: 185 SEKVPM--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND 236

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            N    P+ +  L       + CG   +  LT+ G ++T G+   G LG GS      P 
Sbjct: 237 LNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPR 296

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           +V         + + + I  ++CG +HT A   S GKI  +G GG             GQ
Sbjct: 297 KV--------FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGV------------GQ 336

Query: 391 LGHGNDVDYIHPTIV 405
           LG G   ++  P IV
Sbjct: 337 LGIGMVGNHSTPQIV 351



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 44  GNGDYGRLG--LGSLESRWRPVV-----CSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           GN D+G+LG  L +L ++ RP +      ++ E + +  ++CG AH+L LT  G V++ G
Sbjct: 61  GNNDHGQLGHDLDTLPNK-RPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 119

Query: 97  LNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            N  GQLG     G    P  I  +  K VVQI++G +H  A+T +GELY WG NS GQL
Sbjct: 120 SNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQL 179

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G+G  + KV P+PT ++ L+G+     A G   S AV+  G +  WG    G+LG    +
Sbjct: 180 GIGTTSEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                    S   P  ++ L  + V+  + G   S  +   G V+  G     ++     
Sbjct: 239 ---------SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 289

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPE 332
           ++   P  + +L  S+  ++ CG  HT     S G++Y +G    G LGIG +    +P+
Sbjct: 290 SNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQ 349

Query: 333 RVQGPFSES 341
            V+GP+ ++
Sbjct: 350 IVRGPWFKT 358



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 143/314 (45%), Gaps = 40/314 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPTKVECLSGIF 178
           EVV++  G  H+  +T +G++Y  G N +GQLG     L  K  ++     ++  L    
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRF-KRLTSLENYI 95

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               + G   S+A+T  G+V SWG+   G+LGH  E+          + TPR+IK +   
Sbjct: 96  ITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENG--------RQPTPRMIKAIGAK 147

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVV 294
            V   A+G  H   +  NG +Y +G  +  ++ +         P+LI  L   P +  + 
Sbjct: 148 HVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAF-IA 206

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CGG H+  ++  G ++ WG N  G LG+  ++    P +++   S          +  +S
Sbjct: 207 CGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRS--------LGVRYIS 258

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG   +  ++ EG + T G     GTF        GQLGHG+  + I P  V      K 
Sbjct: 259 CGDDFSVFLTNEGGVFTCG----AGTF--------GQLGHGSCSNEIVPRKVFELMGSKI 306

Query: 414 LQVSCGFNHTGALL 427
            Q++CG  HT A +
Sbjct: 307 TQIACGRRHTLAFV 320



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 40/287 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG  ++G+LGLG    + + +P K++        +   G   ++ +T  GK+ + G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRL-----IKELEGVKVKIAAAGFLHSACIDENGR 258
              G+LGH         L +     PR+     +  LE   +   + G  HS  +   G+
Sbjct: 63  NDHGQLGHD--------LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114

Query: 259 VYIFGDRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGS 314
           V+ +G  AV + L  +  + R+P+  +I  +   +  ++  G YH   LT+ GELY WGS
Sbjct: 115 VFSWGSNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGS 173

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWG 372
           N  G LGIG+     + E+V  P   + +  +    I  ++CG  H+ A+S+ G I  WG
Sbjct: 174 NSYGQLGIGT-----TSEKVPMP---TLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWG 225

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                 TF        GQLG  +     +PT +    ++    +SCG
Sbjct: 226 ----KNTF--------GQLGLNDLNSRCYPTQLRTLRSLGVRYISCG 260


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4219 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4276

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T DGE+Y WG+  +G+LG 
Sbjct: 4277 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4335

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4336 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4389

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4390 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4439

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS++
Sbjct: 4440 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVE 4497

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4498 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDAGEVFTW----------- 4535

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 4536 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4578



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3232 LGHGDN-ATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3290

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3291 SEGSS--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3346

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3347 -------RKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3397

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L       V CG  H+
Sbjct: 3398 NKKPALVIGLDAVIVNRVACGSSHS 3422



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 134/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4305 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4362

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4363 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4420

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4421 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4471

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++      H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4472 VALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4531

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            ++TWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 4532 VFTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 4580

Query: 366  GKI 368
             ++
Sbjct: 4581 SQL 4583



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 168/356 (47%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3101 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3159

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G ++   +  P  VE L     +  A G   S A++ 
Sbjct: 3160 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3217

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  +         ++  P+L+  L G +V   A G     +  
Sbjct: 3218 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALSGRRVIQVACGSRDAQTLA 3268

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3269 LTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3328

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 3329 TWGKGDYYRLGHGGDQHVRKPQPIAGLRGH--------RVIHVAVGALHCLAVTDAGQVY 3380

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3381 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMA 3424



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4325 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4384

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4385 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4442

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4443 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHV-- 4499

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G V+ +GD    ++        +
Sbjct: 4500 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQ 4552

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4553 RPRLVAALQGKHIVKVTCGSAHTLALST 4580



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 135/319 (42%), Gaps = 53/319 (16%)

Query: 70  KHSLKALACGGAHTLFLTETGCVY----ATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
           K  L+ +AC     L L++ G +Y    A    +  QL  +E    +             
Sbjct: 599 KFQLQQVACSEDVVLLLSKEGKLYNWHIAKPEAEPQQLDFAEIANETF------------ 646

Query: 126 VQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
             IS   H    H  A+  +   Y WG   + +LG G   A+   +PTK+E L  +  K 
Sbjct: 647 --ISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVRL-VKS 701

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G   S A+T GG + +WG G  GRLGHG          S  +  P ++  L+  +V 
Sbjct: 702 VYCGCSYSAAITLGGNLYTWGRGTYGRLGHGT---------SDDQCLPAMVMALKDHQVV 752

Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
             A  +G  H+ C+   G V+ +GD    K+     N +  P LI  LP  + V  G   
Sbjct: 753 DVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVFAGAQF 812

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-----SIVLVS 354
           +  L+  G+LY+WG  +  CLG   ++       VQG      V ++ T      IV V+
Sbjct: 813 SLALSCEGQLYSWG--KASCLGHQLVE-----RNVQG----CSVPRLITGLQHKRIVDVA 861

Query: 355 CGWKHTAAI-SEGKILTWG 372
            G  H  A+ S G+I  WG
Sbjct: 862 VGVAHCLALSSSGEIFGWG 880



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           C G H L +      Y+ G+ D  +LG  +     L P +I  L + V  +  G  +S+A
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRLVKSVYCGCSYSAA 711

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT+ G LY WG+ + G+LG G    +   +P  V  L        ALG     ++ +T  
Sbjct: 712 ITLGGNLYTWGRGTYGRLGHGTSDDQC--LPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG G  G+LG+G  +S L          P+LI  L  V+   A A F  S  +  
Sbjct: 770 GLVFAWGDGDYGKLGNGSCNSSL---------LPQLIDCLPRVQRVFAGAQF--SLALSC 818

Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            G++Y +G  +    +++ +       P LI+ L +    +V  G  H   L+S GE++ 
Sbjct: 819 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFG 878

Query: 312 WGSNENGCLGIGSI---DVLHSPERVQGP 337
           WG N+N  +   S+    +L  P +V  P
Sbjct: 879 WGRNDNQQICPASVCSEPLLRQPIQVTLP 907



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + +  P +  A + H +   AL  G AHTL LT  G V+A G  D+
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + +   SL P  I  L + V ++  G   S A++ +G+LY WGK S     L ++
Sbjct: 781 GKLG-NGSCNSSLLPQLIDCLPR-VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVER 838

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +   +P  +  L        A+G    +A++  G++  WG   + ++
Sbjct: 839 NVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 38/290 (13%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT    +S +     A G +    V+  GKV + G 
Sbjct: 3063 VMVWGLNDKEQLG-GLKGSKV-KVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3120

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3121 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3171

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+     +   +P L+  L   +  ++ CG  H+  ++S GELYTWG  E G 
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISE-GKILTWGWGGS 376
            LG G       P+ V               ++ V+CG +   T A++E G + +WG    
Sbjct: 3232 LGHGDNATQLKPKLVAALSGR--------RVIQVACGSRDAQTLALTEDGAVFSWG---- 3279

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G F        G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3280 DGDF--------GKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLAL 3321



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 16/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG G   +R  P    +  +  +K++ CG +++  +T  G +Y  G   +G+
Sbjct: 670 WGVGDSRRLGHGDCHARELPTKIESLVR-LVKSVYCGCSYSAAITLGGNLYTWGRGTYGR 728

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    L  + ++    +VV ++  +G  H+  +T +G ++ WG    G+LG G  
Sbjct: 729 LGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSC 788

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
            + ++P    ++CL  +  ++   G + S+A++  G++ SWG      LGH   E ++ G
Sbjct: 789 NSSLLP--QLIDCLPRV--QRVFAGAQFSLALSCEGQLYSWGKASC--LGHQLVERNVQG 842

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    PRLI  L+  ++   A G  H   +  +G ++ +G
Sbjct: 843 C------SVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWG 880



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 22/126 (17%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   + S    Y+WG  ++  LG G       P +++          +   +  V 
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIES---------LVRLVKSVY 703

Query: 355 CGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  ++AAI+  G + TWG     GT+        G+LGHG   D   P +V   ++ + 
Sbjct: 704 CGCSYSAAITLGGNLYTWG----RGTY--------GRLGHGTSDDQCLPAMVMALKDHQV 751

Query: 414 LQVSCG 419
           + V+ G
Sbjct: 752 VDVALG 757


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 156/341 (45%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKM--LFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++  L  +G    RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G I+    P  V+             ++  ++CG   TAAI
Sbjct: 385 GDIEDRKVPTTVEALRDR--------AVRHIACGANFTAAI 417



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 59/371 (15%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGDLKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCG 356
             T  LT+ G+++T G++  G LG  +++    P  V+        D+I +  VL ++CG
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLG--NLNSDGRPCLVE--------DKIASEHVLQIACG 358

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   PT V    +     
Sbjct: 359 SYHVAVLTSRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAVRH 406

Query: 416 VSCGFNHTGAL 426
           ++CG N T A+
Sbjct: 407 IACGANFTAAI 417



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 29/219 (13%)

Query: 221 LRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++       
Sbjct: 57  IRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED 116

Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPE 332
           +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P 
Sbjct: 117 SVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIPR 175

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
           R+ GP            I  VSCG  HTA I S G++ T+G G            S G L
Sbjct: 176 RISGPLEG-------LQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVL 216

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           GHG+      P  V     +K + V+CG  HT A++E +
Sbjct: 217 GHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 193/397 (48%), Gaps = 50/397 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-GGAHTLFL-TETGCVYATGLND 99
            +WG  D  +LG G   S+ +  V + F   SLK + C GG+ +LF+ T  G VYA G   
Sbjct: 2210 VWGLNDKDQLG-GPRGSKIKTPVLNEF-LSSLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267

Query: 100  FGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQ 154
             G+LG+  S+N+     P +++GL + VV+   + +G  H+ A+TVDG+++ WG+  +G+
Sbjct: 2268 NGRLGLGSSQNVDI---PKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2324

Query: 155  LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
            LG L +   +    P  +E L     +  A G   S AVT  G++ +WG G  GRLGHG 
Sbjct: 2325 LGHLSRMNCEK---PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381

Query: 214  ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKML 271
                     ST++  P+L+K L G +V   A G     +  + + G VY +GD    K+ 
Sbjct: 2382 ---------STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG 2432

Query: 272  FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                     P  + +L      ++ CG   +  LT  G+++TWG  +   LG G+   + 
Sbjct: 2433 RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVR 2492

Query: 330  SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
             P+  +G   +         I+ V+ G  H  A+++ G++  WG         ++ H   
Sbjct: 2493 KPQVAEGLKGK--------KIIHVAVGALHCLAVTDTGQVFAWG---------DNDH--- 2532

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            GQ G G+      P +V   E V+  +V+CG +H+ A
Sbjct: 2533 GQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTA 2569



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 180/397 (45%), Gaps = 52/397 (13%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG   +E     V  +     SL+ +   GG  TLF +T  G +YATG    
Sbjct: 3186 WGHNHRGQLG--GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGAS 3243

Query: 101  GQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI    S +    LE ++   +KK  V +++G  H+ A++V+GE+Y WG+  +G+LG
Sbjct: 3244 GRLGIGGTDSVSTPTLLESIQHVHIKK--VAVNSGGKHALALSVEGEVYSWGEGEDGKLG 3301

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G +       P  +E L G      A G   S  VT  G++ +WG G  GRLGHG    
Sbjct: 3302 HGNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGD--- 3356

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P++   L+G +V   A  +G   + CI ++  V+ +GD    K+    
Sbjct: 3357 ------SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG 3410

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  +  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3411 SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPR 3470

Query: 333  RV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
            +V   QG             I+ ++ G  H  A S+ G++ TW            G +  
Sbjct: 3471 KVAALQG-----------KKIISIATGSLHCVACSDQGEVYTW------------GDNDE 3507

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            GQLG G       P IV   ++ K   V+CG  HT A
Sbjct: 3508 GQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVA 3544



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 150/336 (44%), Gaps = 27/336 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  + G
Sbjct: 3239 GYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N      P  I  L+ KEV+ I+ G  HS+ +T  GELY WGK   G+LG G  
Sbjct: 3299 KLG-HGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDS 3357

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P     + L G      A G    Q++ ++    V SWG G  G+LG G      
Sbjct: 3358 EDQLRP--KMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG----- 3410

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P+ +  L  + V     G   S  + ++G VY +G     ++     +H 
Sbjct: 3411 ----SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV 3466

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RRP  ++ L   +   +  G  H    +  GE+YTWG N+ G LG G+ + +  P R+  
Sbjct: 3467 RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRP-RIVT 3525

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
               +         I  V+CG  HT A S  K L  G
Sbjct: 3526 ALQDK-------KITNVACGSAHTVAWSTSKPLHAG 3554



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 17/273 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+     RP V  +     +  +ACGGAH+  +T +G +Y  G   +G+
Sbjct: 3292 WGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGR 3351

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
            LG  ++    L P     LK   V+ ++ G   S  + +  D  ++ WG    G+LG G 
Sbjct: 3352 LGHGDSED-QLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG- 3409

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P KV+ LS I   +   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3410 -GSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV-- 3466

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR +  L+G K+   A G LH     + G VY +GD    ++     N  +
Sbjct: 3467 -------RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQ 3519

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            RP +++ L   +   V CG  HT   ++   L+
Sbjct: 3520 RPRIVTALQDKKITNVACGSAHTVAWSTSKPLH 3552



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 161/349 (46%), Gaps = 48/349 (13%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLR--ISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            V+  GLND  QLG           L   +S LK  VV  + G      +T +G++Y  G+
Sbjct: 2208 VFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLK--VVCCAGGSKSLFVVTAEGKVYACGE 2265

Query: 150  NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
             +NG+LGLG  +++ + IP +V  LS    K+ A+  G   ++A+T  GKV SWG G  G
Sbjct: 2266 GTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 2323

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LGH         L   +   PRL++ L+  +++  A G  HSA +  +G +Y +G    
Sbjct: 2324 KLGH---------LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEY 2374

Query: 268  DKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
             ++   +     RP L+  L      +V CG     T  LT  G +Y+WG  + G LG G
Sbjct: 2375 GRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG 2434

Query: 324  SID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
              +   V H+ ER+ G             ++ + CG + + A+++ G++ TWG G     
Sbjct: 2435 GSEGCSVPHNVERLNG-----------QGVIQIECGAQFSLALTKAGQVWTWGKGDYF-- 2481

Query: 380  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                      +LGHG D     P +    +  K + V+ G  H  A+ +
Sbjct: 2482 ----------RLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTD 2520



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 129/289 (44%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +PT +E L+ +   Q   G +   AVT  GK+ + 
Sbjct: 3181 GTIYGWGHNHRGQLG-GIEGAKV-KVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYAT 3238

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G SGRLG G   S+          TP L++ ++ V +K  A  +G  H+  +   G V
Sbjct: 3239 GYGASGRLGIGGTDSV---------STPTLLESIQHVHIKKVAVNSGGKHALALSVEGEV 3289

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP +I  L   E  ++ CGG H+  +TS GELYTWG    
Sbjct: 3290 YSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRY 3349

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P+          +D  C S      G   T  IS+   + W WG   
Sbjct: 3350 GRLGHGDSEDQLRPKMADALKGYRVIDVACGS------GDSQTLCISDDDNV-WSWG--- 3399

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  V+   ++   +V CG   + AL
Sbjct: 3400 -----DGDY--GKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIAL 3441



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 131/307 (42%), Gaps = 39/307 (12%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            Q S G H  S   +  ++++WG N   QLG G + +K I  P   E LS +     A G 
Sbjct: 2192 QRSAGDHGGSR-EIQTKVFVWGLNDKDQLG-GPRGSK-IKTPVLNEFLSSLKVVCCAGGS 2248

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
            +    VT  GKV + G G +GRLG G   ++           P+ +  L    VK  A  
Sbjct: 2249 KSLFVVTAEGKVYACGEGTNGRLGLGSSQNV---------DIPKQVNGLSQYVVKKVAVH 2299

Query: 245  AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
            +G  H+  +  +G+V+ +G+    K+      +  +P L+  L      ++ CG  H+  
Sbjct: 2300 SGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAA 2359

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
            +TS GELYTWG  E G LG G       P+ V+          +   ++ V+CG +    
Sbjct: 2360 VTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKA--------LVGKRVIQVACGSRDAQT 2411

Query: 363  IS---EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            ++   EG + +WG     G F        G+LG G       P  V        +Q+ CG
Sbjct: 2412 LTLTDEGMVYSWG----DGDF--------GKLGRGGSEGCSVPHNVERLNGQGVIQIECG 2459

Query: 420  FNHTGAL 426
               + AL
Sbjct: 2460 AQFSLAL 2466



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 32/230 (13%)

Query: 194  GGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            G G +  WG    G+LG   G +  +   + S +   P  I   E     + A G L++ 
Sbjct: 3179 GSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYAT 3238

Query: 252  CIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
                +GR+ I G D      L +   H      I K+     V  GG H   L+  GE+Y
Sbjct: 3239 GYGASGRLGIGGTDSVSTPTLLESIQHVH----IKKV----AVNSGGKHALALSVEGEVY 3290

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
            +WG  E+G LG G+      P  ++    +  +D        ++CG  H+A + S G++ 
Sbjct: 3291 SWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVID--------IACGGAHSACVTSSGELY 3342

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            TWG G              G+LGHG+  D + P + +  +  + + V+CG
Sbjct: 3343 TWGKG------------RYGRLGHGDSEDQLRPKMADALKGYRVIDVACG 3380


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 163/322 (50%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++LK DI L    G     + +   + F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 29  SKFWLKNDIPLRIACGDEHTALITENGKLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 86

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
              ++ +ACG  HTL  T  G VYA+G N  GQLG+ +     S + L     +  +  +
Sbjct: 87  SEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKML 146

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G + S+A+TV G+L+MWG N+ GQ+GLGK++     + +  E   G      + G+  
Sbjct: 147 AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQ----VSSPQEVSVGQPISWVSCGYYH 202

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G + ++G   SG+LG       LG  +      P+L+K ++   V+  A G  
Sbjct: 203 SALVTVDGALYTFGERDSGKLG-------LGTHQLPGHRVPQLVKSIKE-PVRQVACGGG 254

Query: 249 HSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E G VY FG     ++     +F+    +R P L+         +VVCG  HT 
Sbjct: 255 HTVALAE-GNVYTFGLGQFGQLGHGTFIFE----SRVPRLVEHFKKGRACQVVCGENHTA 309

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           V+T  G LYT+G   +G LG+G
Sbjct: 310 VITEDGLLYTFGDGRHGKLGLG 331



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 165/347 (47%), Gaps = 46/347 (13%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + E+G V+      FG+   ++NI           LK ++ ++I+ G  H++ IT +G+L
Sbjct: 9   IPESGAVFT-----FGKSKFADNIPSKF------WLKNDIPLRIACGDEHTALITENGKL 57

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +M+G N+ GQLGLG K    +  PT V+ L     +  A G   ++  T  GKV + G  
Sbjct: 58  FMFGSNNWGQLGLGSKV--TVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGN 115

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F R           + +G  +K+ AAG   SA +  +G+++++GD
Sbjct: 116 SEGQLGLGDCEERTSFKRLD-------FFDSQG-PIKMLAAGSNTSAALTVSGKLFMWGD 167

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
               ++   + +    P  +S       V CG YH+ ++T  G LYT+G  ++G LG+G+
Sbjct: 168 NTEGQIGLGKESQVSSPQEVSVGQPISWVSCGYYHSALVTVDGALYTFGERDSGKLGLGT 227

Query: 325 IDVLHSPERVQGPFSESP--VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
               H     Q P    P  V  I   +  V+CG  HT A++EG + T+G G        
Sbjct: 228 ----H-----QLPGHRVPQLVKSIKEPVRQVACGGGHTVALAEGNVYTFGLG-------- 270

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLGHG  + +   P +V   +  +A QV CG NHT  + E
Sbjct: 271 ----QFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITE 313



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 153/340 (45%), Gaps = 48/340 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           +ACG  HT  +TE G ++  G N++GQLG+   +  + +P  +  LK E VQ ++ G +H
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVN-KPTCVKALKSEKVQLVACGRNH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
           +   T  G++Y  G NS GQLGLG    +     T  + L   F  Q      A G   S
Sbjct: 100 TLICTAKGKVYASGGNSEGQLGLGDCEER-----TSFKRLD-FFDSQGPIKMLAAGSNTS 153

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G++G G+ES +          +P+ +    G  +   + G+ H
Sbjct: 154 AALTVSGKLFMWGDNTEGQIGLGKESQV---------SSPQEVSV--GQPISWVSCGYYH 202

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYS-EEVVCGGYHTCVLT 304
           SA +  +G +Y FG+R   K+    G H     R P L+  +     +V CGG HT  L 
Sbjct: 203 SALVTVDGALYTFGERDSGKLGL--GTHQLPGHRVPQLVKSIKEPVRQVACGGGHTVALA 260

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            G  +YT+G  + G LG G+        R+   F +    Q+        CG  HTA I+
Sbjct: 261 EGN-VYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVV-------CGENHTAVIT 312

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
           E  +L     G HG            LG  N  +   PT+
Sbjct: 313 EDGLLYTFGDGRHGKLG---------LGEENFTNQFKPTL 343



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 5/121 (4%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G  D G+LGLG+  L     P +  +  K  ++ +ACGG HT+ L E G VY  GL  F
Sbjct: 215 FGERDSGKLGLGTHQLPGHRVPQLVKSI-KEPVRQVACGGGHTVALAE-GNVYTFGLGQF 272

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG    I  S  P  +   KK    Q+  G +H++ IT DG LY +G   +G+LGLG+
Sbjct: 273 GQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGLGE 332

Query: 160 K 160
           +
Sbjct: 333 E 333



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  ++++P +C  F K++++   CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVL 365


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 1802 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 1859

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 1860 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 1918

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 1919 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 1972

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 1973 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 2022

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 2023 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 2080

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 2081 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDSGEVYTW----------- 2118

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 2119 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 2161



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 843  WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + VVQ++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 903  LGHGDN-ATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 961

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 962  SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 1017

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 1018 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 1068

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 1069 NKKPALVIGLDAVFVNRVACGSSHS 1093



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 135/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 1888 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 1945

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 1946 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 2003

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 2004 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 2054

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 2055 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 2114

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 2115 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 2163

Query: 366  GKI 368
             ++
Sbjct: 2164 SQL 2166



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 772  GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 830

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 831  ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 888

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  ++ L          P+L+  L G +V   A G     +  
Sbjct: 889  QGELYTWGLGEYGRLGHGDNATQL---------KPKLVTALAGRRVVQVACGSRDAQTLA 939

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 940  LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 999

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 1000 TWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVTDAGQVY 1051

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 1052 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 1095



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 15/267 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 1908 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967

Query: 103  LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  ++       L  + L    + I+  +G   +  IT D  ++ WG    G+LG G  
Sbjct: 1968 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-- 2025

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +   
Sbjct: 2026 GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV--- 2082

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                    P+ +  L+G K+   A G LH     ++G VY +GD    ++        +R
Sbjct: 2083 ------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQR 2136

Query: 281  PSLISKL--PYSEEVVCGGYHTCVLTS 305
            P L++ L   +  +V CG  HT  L++
Sbjct: 2137 PRLVAALQGKHIVKVTCGSAHTLALST 2163



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 38/290 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           + +WG N   QLG G K +KV  +PT  + +S +     A G +    V+  GKV + G 
Sbjct: 734 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 791

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
           G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 792 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 842

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +G+    K+         +P L+  L   +  +V CG  H+  ++S GELYTWG  E G 
Sbjct: 843 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISE-GKILTWGWGGS 376
           LG G       P+ V               +V V+CG +   T A++E G + +WG    
Sbjct: 903 LGHGDNATQLKPKLVTALAGR--------RVVQVACGSRDAQTLALTEDGAVFSWG---- 950

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G F        G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 951 DGDF--------GKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL 992


>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
 gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
          Length = 390

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 175/394 (44%), Gaps = 45/394 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG G  G+LG G LE  + P +          S+  LACGGAH + LT  G V+  G   
Sbjct: 19  WGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTWGRGT 78

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG  E +  SL P  +S L+  V+  +S G+ HS  ++  G L+  G  S GQLG G
Sbjct: 79  TGQLGHGEMLN-SLHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSFGQLGQG 137

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++  P+  KV+  +  F  Q A G   S+ +  G +V  +G+G  G+LG  ++    
Sbjct: 138 NYRSQSTPV--KVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGKRGQLGISRD---- 191

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
              ++ S   P++   LE V++   +A   HSA I  +G +Y +G        F   + A
Sbjct: 192 ---KTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRG------FAGASDA 242

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL-GIGSID-VLHSPERVQG 336
             P L        +   G  H  +LT   E+   G N +G L  +  +  V H PE   G
Sbjct: 243 NFPQLSLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRPEDSPG 302

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                 +      +V ++ G +H+A       LTWGWG              GQLG GN 
Sbjct: 303 TALNEVIGLDGVKVVKIAAGAEHSA-------LTWGWG------------EHGQLGLGNT 343

Query: 397 VDYIHPTIVNFGENVK----ALQVSCGFNHTGAL 426
            D   P  V+   +++    +L V CG   T A+
Sbjct: 344 NDQTIPQTVSLIPDIQNKEASLNVYCGSGFTFAI 377



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 119/239 (49%), Gaps = 25/239 (10%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSW 201
           +++ WG  + GQLG GK   + +P    +  LS   +    A G    +A+T GG+V +W
Sbjct: 15  QIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTW 74

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G +G+LGHG+   +L  L       P+ +  L+   +   +AG+ HS  + + G ++ 
Sbjct: 75  GRGTTGQLGHGE---MLNSLH------PKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFT 125

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
            GD +  ++   +GN+ R  S   K+ Y       ++ CG  H+ VL +G ++Y +GS +
Sbjct: 126 CGDGSFGQL--GQGNY-RSQSTPVKVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGK 182

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
            G LGI         + +  P     ++ +   IV +S    H+AAIS +G + TWG G
Sbjct: 183 RGQLGISR----DKTKSINLPQVTCGLEDV--QIVSISANGDHSAAISADGHLYTWGRG 235



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 25/139 (17%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTSIV 351
           + CGG H   LTSGG ++TWG    G LG G  ++ LH            PV  + + ++
Sbjct: 55  LACGGAHVIALTSGGRVFTWGRGTTGQLGHGEMLNSLH----------PKPVSSLQSCVI 104

Query: 352 L-VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
             VS GW H+  +S+ G + T G     G+F        GQLG GN      P  V++  
Sbjct: 105 THVSAGWSHSGFVSDIGLLFTCG----DGSF--------GQLGQGNYRSQSTPVKVDYFA 152

Query: 410 NVKALQVSCGFNHTGALLE 428
           N    Q++CG  H+  LL 
Sbjct: 153 NNFVNQIACGMRHSLVLLN 171


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 163/333 (48%), Gaps = 45/333 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  + +RP+   A +   +K  ACG  HTL  TE G VYATG N+ G
Sbjct: 54  MFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L     S  + ++ Q+S G + S+A+T DGEL+MWG NS GQ+GL 
Sbjct: 114 QLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAALTEDGELFMWGDNSEGQIGLN 171

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +   +P    V    G      + G+  S  VT  GK+ ++G    G+LG   E  I 
Sbjct: 172 SISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLI- 226

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQ 273
                 +   P+L+  +    +++A  G  H+  + E   VY FG     ++     +FQ
Sbjct: 227 ------NHRKPQLVSGISEKVIQVACGGG-HTVVLTEKA-VYTFGQGRFGQLGLGSFIFQ 278

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
               A  P+++  +   +   + CG  HT ++T  G +YT+G   +G LG+G  +     
Sbjct: 279 ----APEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLGLEN----- 329

Query: 332 ERVQGPFSESPVDQICTS-----IVLVSCGWKH 359
                 F+   V  +C+      I LV+CG  H
Sbjct: 330 ------FTNQFVPTLCSHFSKFIIHLVACGGCH 356



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 156/319 (48%), Gaps = 45/319 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
           L+CG  HT  +T    +Y  G N++GQLG+ S++  Y   P+ +  LK E V+++  G +
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVY--RPICVKALKSEKVKLAACGRN 93

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
           H+   T  G +Y  G N+ GQLGLG    +          L   FT     KQ + G   
Sbjct: 94  HTLVSTEGGNVYATGGNNEGQLGLGDTEER------NSFHLISFFTSRHKIKQLSAGANI 147

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S A+T  G++  WG    G++G    S++         Y PR +    G  +   + G+ 
Sbjct: 148 SAALTEDGELFMWGDNSEGQIGLNSISNV---------YVPRQV--TVGKPISWISCGYY 196

Query: 249 HSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLPYSEEVV---CGGYHTCV 302
           HSA +   G++Y FG+    K+     Q  NH R+P L+S +  SE+V+   CGG HT V
Sbjct: 197 HSAFVTMEGKLYTFGEPECGKLGLPSEQLINH-RKPQLVSGI--SEKVIQVACGGGHTVV 253

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           LT    +YT+G    G LG+GS  +  +PE       E   DQ    I  +SCG  HTA 
Sbjct: 254 LTEKA-VYTFGQGRFGQLGLGSF-IFQAPEPA---ILEHVKDQ---KIRHISCGENHTAL 305

Query: 363 ISE-GKILTWGWGGSHGTF 380
           I++ G + T+G  G HG  
Sbjct: 306 ITDVGHMYTFG-DGRHGKL 323



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 163/344 (47%), Gaps = 44/344 (12%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           ++G V+      FG+  ++ENI     P +        + +S G  H++ IT + +LYM+
Sbjct: 6   DSGAVFT-----FGKTRLAENI-----PSKFWFKNDVPIYLSCGDEHTALITGNNKLYMF 55

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N+ GQLGLG K+A   PI   V+ L     K AA G   ++  T GG V + G    G
Sbjct: 56  GSNNWGQLGLGSKSAVYRPIC--VKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G       F    S +T R        K+K  +AG   SA + E+G ++++GD + 
Sbjct: 114 QLGLGDTEERNSF-HLISFFTSRH-------KIKQLSAGANISAALTEDGELFMWGDNSE 165

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++     ++   P  ++       + CG YH+  +T  G+LYT+G  E G LG+ S  +
Sbjct: 166 GQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQL 225

Query: 328 LH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 385
           ++   P+ V G         I   ++ V+CG  HT  ++E  + T+G     G F     
Sbjct: 226 INHRKPQLVSG---------ISEKVIQVACGGGHTVVLTEKAVYTFG----QGRF----- 267

Query: 386 SSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              GQLG G+ +     P I+   ++ K   +SCG NHT  + +
Sbjct: 268 ---GQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITD 308



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F K  +  +ACGG H L  
Sbjct: 315 FGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIF 360


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 175/376 (46%), Gaps = 39/376 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G+ +S+  PV        ++ A+ CGG H++ L   G V+A G N  G+
Sbjct: 179 WGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGE 238

Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           L  G +EN      P+ +  L  +++ IS G  +S A++ DG +  WG NS+GQLG G  
Sbjct: 239 LGGGTTENNSNVPVPVPVPNL-TDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNT 297

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 +PTK+  L     K  + G   S+AVT  G V +WG    G++G+G++S+    
Sbjct: 298 DQNS--VPTKISSLP--LMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPV 353

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           L       P  ++ L  +    A A F  +  ID  GRV+ +G     ++      ++  
Sbjct: 354 LN------PVQVQGLTDIDAVCAGATFSLALGID--GRVWAWGLNDEGQLGDGTNTNSTT 405

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  ++ L     V CG  H+  + + G++ +WG N+ G LG GS     +P  V G    
Sbjct: 406 PVEVTNLAKISAVACGSDHSLAIRN-GKVKSWGLNDEGQLGDGSTRSSSAPLDVTG---- 460

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                  + IV V+ G  H+ AI S+G I  WG  G             GQLG G +   
Sbjct: 461 ------LSDIVYVAAGESHSLAITSKGNIYVWGLNGD------------GQLGDGTNRSS 502

Query: 400 IHPTIVNFGENVKALQ 415
             P  ++    V A++
Sbjct: 503 RTPKTIDLNLGVTAVE 518



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 47/335 (14%)

Query: 104 GISENIGYSLEPLRISGLKKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G     G+S  P R +G + +          QIS G+ HS A+  +G+L+ WG N +GQL
Sbjct: 129 GTQPQPGFSPRP-RPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQL 187

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   ++  P+  ++  L+ I       G + S+A+   G+V +WG  G G LG G   
Sbjct: 188 GDGTNDSQTTPVAVQINALTTITA--VDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTE 245

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           +               I       + I+A G  +S  +  +G V  +G  +  ++     
Sbjct: 246 NNSNVPVPVPVPNLTDI-------IAISAGGE-YSIALSSDGSVLTWGANSDGQLGNGNT 297

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG---SIDVLHSPE 332
           +    P+ IS LP  + +  G  H+  +T  G +Y WG N+ G +G G   + + + +P 
Sbjct: 298 DQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPV 357

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 391
           +VQG           T I  V  G   + A+  +G++  W W          G +  GQL
Sbjct: 358 QVQG----------LTDIDAVCAGATFSLALGIDGRV--WAW----------GLNDEGQL 395

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G G + +   P  V     + A  V+CG +H+ A+
Sbjct: 396 GDGTNTNSTTPVEVTNLAKISA--VACGSDHSLAI 428



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 137/309 (44%), Gaps = 43/309 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
           ++ G +H+L L   G ++A GLN+ GQLG   N   +    ++I+ L   +  +  G  H
Sbjct: 160 ISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTT-ITAVDCGGDH 218

Query: 135 SSAITVDGELYMWGKNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           S A+   G ++ WG N +G+LG G  +    +P+P  V  L+ I    A  G E S+A++
Sbjct: 219 SMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISA--GGEYSIALS 276

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G VL+WGA   G+LG+G          +     P  I  L    +K  +AG  HS  +
Sbjct: 277 SDGSVLTWGANSDGQLGNG---------NTDQNSVPTKISSLP--LMKGISAGEAHSLAV 325

Query: 254 DENGRVYIFGDRAVDKMLFQEG----------NHARRPSLISKLPYSEEVVCGGYHTCVL 303
            E+G VY +G       L  EG          N    P  +  L   + V  G   +  L
Sbjct: 326 TEDGFVYAWG-------LNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCAGATFSLAL 378

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
              G ++ WG N+ G LG G+     +P  V               I  V+CG  H+ AI
Sbjct: 379 GIDGRVWAWGLNDEGQLGDGTNTNSTTPVEVTN----------LAKISAVACGSDHSLAI 428

Query: 364 SEGKILTWG 372
             GK+ +WG
Sbjct: 429 RNGKVKSWG 437


>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
 gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
          Length = 394

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 176/402 (43%), Gaps = 32/402 (7%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVY 93
           QR FA  WG   YG+LGLG+ +    P + + F  H   +K+++ GG H+  +T+ G VY
Sbjct: 9   QRLFA--WGANSYGQLGLGTTQDSLLPQLVTGFPNHETVIKSISAGGGHSAAVTDAGHVY 66

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
             G N  GQLG++     +   L    L   V +++ G+  +  +T  GEL   G N+  
Sbjct: 67  VCGQNSEGQLGLNHTTDVTHFSLCPGTLTLRVSKVACGWDFTLILTDSGELLSCGANTYS 126

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   +    IP P  ++    +     A G    +A+T  G++  WG+G +       
Sbjct: 127 QLGRAGEERSCIPRPLDIQKRKVL---DVAAGLRHVLALTDNGQIFQWGSGLASHARRFS 183

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +   +  + S++E  P  +  + G+  K+ AAG  H   + + G VY++G     ++L  
Sbjct: 184 QQKPIPAVYSSTE--PCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSNKHGQLLHS 241

Query: 274 EGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV--- 327
           +        + + L   E    VV G  H    T  G+++TWG      LG         
Sbjct: 242 DPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTDTGKVFTWGRANYSQLGRPPNSEGTG 301

Query: 328 LHSPERVQGPFSESPVDQICTSIV---LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
           LH  E V    S + +     S+     V+CG +H  A+  G + +WGW           
Sbjct: 302 LH--ETVLQGISANQLPAWIPSLTGSSQVACGSEHNLAVCGGLLYSWGW----------- 348

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            +  G  G+G++ +   PT+V      +   + CG  H+ AL
Sbjct: 349 -NEHGMCGNGSETNVPVPTLVGIPPTARVDLIGCGAGHSMAL 389


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 145/317 (45%), Gaps = 39/317 (12%)

Query: 122  KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
            +K    +S G+ H++ ITVDGEL+ WG N++GQLG G  A K    P +VE L       
Sbjct: 1193 EKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMM 1252

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             +LG E +V +     + SWG G  G+LGHG          ST    P+ I+E  G K+ 
Sbjct: 1253 MSLGGEHTVVIDRSFHIYSWGNGKYGQLGHG---------VSTPHNLPKRIEEFAGQKIS 1303

Query: 242  IAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEE-------- 292
              A G+ H+  +   G ++ FG     ++ L    +H   P+ ++               
Sbjct: 1304 SIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTG 1363

Query: 293  VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
            + CG  H+ + TS G++Y++G+N  G LG GS +    P+ +QG   +        +I  
Sbjct: 1364 IFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGK--------NIKR 1415

Query: 353  VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            ++CG  HT   ++   +  WG G                LG G++ + + P +V    N 
Sbjct: 1416 ITCGPYHTVVTTDLDSVYCWGQGEHMC------------LGTGSNKNELVPKLVELFVNK 1463

Query: 412  KALQVSCGFNHTGALLE 428
            +  +V CG  HT  L +
Sbjct: 1464 RVERVVCGLYHTATLTQ 1480



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 183/406 (45%), Gaps = 87/406 (21%)

Query: 43   WGNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WGN   G+LG  L + + +  P+   + ++  +  ++ GG HT+ +  +  +Y+ G   +
Sbjct: 1218 WGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKY 1277

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG   +  ++L P RI     +++  I+TGY H+  +   G+L+ +G N +GQLGL  
Sbjct: 1278 GQLGHGVSTPHNL-PKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLND 1336

Query: 160  KAAKVIPIPTKVEC-----------LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                 +PIPT+V             ++GIF      G   SV  T  G V S+GA   G+
Sbjct: 1337 LKHH-LPIPTRVNTADIHHAGQPTRVTGIFC-----GHSHSVLRTSHGDVYSFGANAKGQ 1390

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG   S            P+LI+ L+G  +K    G  H+    +   VY +G     
Sbjct: 1391 LGHGSTESC---------RYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWG----- 1436

Query: 269  KMLFQEGNH------ARRPSLISKL------PYSEEVVCGGYHTCVLT-------SGGEL 309
                 +G H      + +  L+ KL         E VVCG YHT  LT       +GG +
Sbjct: 1437 -----QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNV 1491

Query: 310  YTWGSNENGCLGIG------SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            Y  GS+E+G LGIG      S+D  + P  +    S + VD        ++ G +  A I
Sbjct: 1492 YICGSSEHGKLGIGGDPRSPSLDKAY-PAIIPSINSANVVD--------LASGAEFNALI 1542

Query: 364  -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
             S G +  WG  G+H           GQ+G+G + D   PT V+  
Sbjct: 1543 TSNGALYMWG-AGTH-----------GQIGNGKNQDTWIPTRVSLS 1576



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 150/353 (42%), Gaps = 25/353 (7%)

Query: 62   PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISG 120
            P+    F +   K+++CG  H   +T  G ++  G N  GQLG     G +   P+R+  
Sbjct: 1185 PMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES 1244

Query: 121  LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
            LK+  ++ +S G  H+  I     +Y WG    GQLG G        +P ++E  +G   
Sbjct: 1245 LKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPH--NLPKRIEEFAGQKI 1302

Query: 180  KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
               A G+  ++ +  GG + ++G+   G+LG       L     T   T  +    +  +
Sbjct: 1303 SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPI--PTRVNTADIHHAGQPTR 1360

Query: 240  VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG 297
            V     G  HS     +G VY FG  A  ++        R P LI  L     + + CG 
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420

Query: 298  YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            YHT V T    +Y WG  E+ CLG GS      P+ V+  F    V+++        CG 
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVEL-FVNKRVERVV-------CGL 1472

Query: 358  KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-----VDYIHPTIV 405
             HTA +++      G   + G     G S  G+LG G D     +D  +P I+
Sbjct: 1473 YHTATLTQ----PMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAII 1521



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 23/149 (15%)

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPF 338
            P+L     +++ V CG  H  V+T  GEL+TWG+N +G LG G     H  +P RV+   
Sbjct: 1187 PALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES-L 1245

Query: 339  SESPVDQICTSIVLVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
             ++P       I+++S G +HT  I     I +WG G              GQLGHG   
Sbjct: 1246 KQTP-------IMMMSLGGEHTVVIDRSFHIYSWGNGKY------------GQLGHGVST 1286

Query: 398  DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             +  P  +      K   ++ G+ HT  L
Sbjct: 1287 PHNLPKRIEEFAGQKISSIATGYWHTLVL 1315


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 23/285 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG+LG     SR   +  S+ E  ++  ++CG  H++ + + G +Y+ G    GQL
Sbjct: 59  GQNPYGQLGRKGNNSRIEQI--SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQL 116

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G  +    +  P RI+GL  ++++QIS G  HS A+  DG ++ WG+N  GQLGLG +  
Sbjct: 117 GTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P  V+ L GI   Q   G  Q+ A++  G V +WG   +G+LG   ++       
Sbjct: 177 NQ-ATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDA------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P  +  L  + V   + G  H+A ++++G VY FGD    ++  Q GN    P 
Sbjct: 229 KKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQ 288

Query: 283 LISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            I +  YS    +V CG YHT        LY +  N     G GS
Sbjct: 289 KIEE--YSRQVSQVACGRYHTL-------LYVFTCNRIVSFGKGS 324



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 42/376 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+L +   E        + +  +K S++ ++ G  H+L+L + G + + G N +
Sbjct: 4   WGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N    +E  +IS L+ + +V +S G +HS A+  +G +Y WG  S GQLG GK
Sbjct: 64  GQLGRKGN-NSRIE--QISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGK 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            ++K    P ++  L      Q + G   SVA+   G+V SWG    G+LG G  S I+ 
Sbjct: 121 FSSKNF-TPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLG--SQII- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                ++ TP+L+K L+G+ +    AG   +  +  +G V+ +G     ++ F+  N A+
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFK--NDAK 229

Query: 280 RPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           + +     PY+ +         + CG  HT VL   G +YT+G +  G LG  S +    
Sbjct: 230 KGTF---KPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSV 286

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTA--AISEGKILTWGWGG--SHGTFSEDGHS 386
           P++++         +    +  V+CG  HT     +  +I+++G G     G       +
Sbjct: 287 PQKIE---------EYSRQVSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQGNDESSDQA 337

Query: 387 SGGQLGHGNDVDYIHP 402
              QL    D+  + P
Sbjct: 338 EASQLPSAFDISSLVP 353



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 42/292 (14%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG N  GQL + ++  +V+              ++ ++G + S+ +   G +LS G 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 204 GGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
              G+LG  G  S I              I  LE   +   + G  HS  + + G +Y +
Sbjct: 61  NPYGQLGRKGNNSRI------------EQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSW 108

Query: 263 GDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           GD +  ++    F   N    P  I+ L   +  ++ CG +H+  L   G +++WG N+ 
Sbjct: 109 GDGSEGQLGTGKFSSKNFT--PKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKC 166

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G LG+GS  +  +  ++       P       +V V+ G   T A+S  G +  W     
Sbjct: 167 GQLGLGSQIINQATPQLVKSLKGIP-------LVQVTAGGSQTFALSMSGTVFAW----- 214

Query: 377 HGTFSEDGHSSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  G ++ GQLG  ND       P  V+   ++    +SCG  HT  L
Sbjct: 215 -------GRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVL 259



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 66/162 (40%), Gaps = 32/162 (19%)

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           +E  H +      K    ++V  G  H+  L   G L + G N  G LG           
Sbjct: 19  KEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKG-------- 70

Query: 333 RVQGPFSESPVDQICT----SIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSS 387
                 + S ++QI +    +IV VSCG  H+ A+  EG I +WG G            S
Sbjct: 71  ------NNSRIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDG------------S 112

Query: 388 GGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GQLG G        P  +    N K +Q+SCG  H+ AL E
Sbjct: 113 EGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAE 154


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 160/345 (46%), Gaps = 37/345 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LG G+  +R  PV         ++A+A    H+L + + G V+A G+N  GQ
Sbjct: 164 WGPNDYGQLGDGTTTNRPVPVQVGGLS--GIRAVAASSDHSLAVRDDGTVWAWGINSSGQ 221

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P++++GL   + +++ G  +S A+  DG ++ WG NS+GQLG G    
Sbjct: 222 LG-DGTTNDRLTPVQVAGL-SSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTD 279

Query: 163 KVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           ++   P +V+ LS +    AA    LG    +AV G G V +WG  GSG+LG G      
Sbjct: 280 RL--TPGRVKGLSEVVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGT----- 332

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFL-------HSACIDENGRVYIFGDRAVDKML 271
               +T   TP  + EL+GVK       F        +S  +  +G V+ +G  +  ++ 
Sbjct: 333 ----TTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLG 388

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   RP+ ++ L     V     H   +   G +++WG N NG LG  +      P
Sbjct: 389 DGTTISRSRPAQVNALSGITAVSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIP 448

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGG 375
            +V G           + +  V+ G  H+ ++ E GK   WG+ G
Sbjct: 449 VQVHG----------LSGVRSVAAGESHSVSVREDGKAWAWGYRG 483



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 169/370 (45%), Gaps = 53/370 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---------GAHTLFLTETGCVY 93
           WGN   G+LG G+   R  PV  S  E   +KA+A G         G+++L +   G V+
Sbjct: 320 WGNNGSGQLGDGTTTDRLTPVQVS--ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVW 377

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           A G N  GQLG    I  S  P +++ L   +  +S    H+ A+  DG ++ WGKN+NG
Sbjct: 378 AWGSNSTGQLGDGTTISRS-RPAQVNALSG-ITAVSASSDHALAMRDDGTVWSWGKNTNG 435

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG    A ++IP+  +V  LSG+  +  A G   SV+V   GK  +WG  G G LG G 
Sbjct: 436 KLGDETTAHRLIPV--QVHGLSGV--RSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGA 491

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                 FL     + P     L     +IA+ G   S  + E+  ++++G  ++  +   
Sbjct: 492 M-----FL----SFVPVQTMGLT-ATAQIASHGN-RSLAVKEDNTLWVWGSSSLGDL--G 538

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           +G+    P   S L   + V  G  ++  + + G L+ WGSN  G LG GS     +P  
Sbjct: 539 DGSTGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVP 598

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G            ++V  +  +  + A+ S+G +  W            G +S GQLG
Sbjct: 599 VNG----------LENVVGAAASFSVSLALRSDGTVWAW------------GLNSVGQLG 636

Query: 393 HGNDVDYIHP 402
            G+ ++   P
Sbjct: 637 DGSTINRSTP 646



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 143/314 (45%), Gaps = 41/314 (13%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            A+A G  HTL L   G V+A G ND+GQLG        + P+++ GL   +  ++    
Sbjct: 143 PAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV-PVQVGGLSG-IRAVAASSD 200

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           HS A+  DG ++ WG NS+GQLG G    ++ P+  +V  LS I  K+ A G   S+AV 
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPV--QVAGLSSI--KRVAAGDGYSLAVH 256

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA-----GFL 248
           G G V +WG   SG+LG G          +T   TP  +K L  V V+++AA     G  
Sbjct: 257 GDGTVWAWGINSSGQLGDGT---------TTDRLTPGRVKGLSEV-VEVSAAKYSLLGSA 306

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG---------GYH 299
           H   +  +G V+ +G+    ++          P  +S+L   + +  G         G +
Sbjct: 307 HVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSY 366

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  +   G ++ WGSN  G LG G+      P +V             + I  VS    H
Sbjct: 367 SLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVNA----------LSGITAVSASSDH 416

Query: 360 TAAI-SEGKILTWG 372
             A+  +G + +WG
Sbjct: 417 ALAMRDDGTVWSWG 430



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 158/395 (40%), Gaps = 78/395 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G LG G++   + PV        +   +A  G  +L + E   ++  G +  G 
Sbjct: 479 WGYRGMGLLGDGAMFLSFVPVQTMGLT--ATAQIASHGNRSLAVKEDNTLWVWGSSSLGD 536

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + +     S +  +V  ++ G  +S A+  +G L+ WG NS GQLG G    
Sbjct: 537 LGDGSTGAHPVP----SSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTN 592

Query: 163 KVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH---------- 211
           ++ P+P   +E + G     AA  F  S+A+   G V +WG    G+LG           
Sbjct: 593 RLTPVPVNGLENVVG-----AAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTINRSTPG 647

Query: 212 -------------------------------GQESSILGFLRSTSEYTPRLIKELEGVKV 240
                                          G     LG   +T++  P  +  L GVK 
Sbjct: 648 PVGGLVHIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKA 707

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
             AA   + SA + +NG V+ +GD    ++          P L+S L   + +  G +H 
Sbjct: 708 VAAAI--VSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLSGVKALASGNHHF 765

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L + G ++ WG N    LG G+     +P +V+G           + + L++ G  H+
Sbjct: 766 LALRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQVRG----------LSDVKLIAAGENHS 815

Query: 361 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            A+  +G + TW            G ++ GQLG+G
Sbjct: 816 MAVRKDGTVWTW------------GLNTSGQLGNG 838



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV+ S      +KALA G  H L L   G V+A G N + Q
Sbjct: 727 WGDNYSGQLGDGTTTDRLTPVLVSGLS--GVKALASGNHHFLALRNDGTVWAWGDNYYSQ 784

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+++ GL  +V  I+ G +HS A+  DG ++ WG N++GQLG G    
Sbjct: 785 LGDGTRTQRS-TPVQVRGLS-DVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842

Query: 163 KVIPIP 168
             +P+P
Sbjct: 843 SALPVP 848



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 30/267 (11%)

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           Q  LG  A+    + +   C++       A+G + ++ +   G V +WG    G+LG G 
Sbjct: 121 QNALGLSASASFVLSSSPTCIA----PAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGT 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    +T+   P  +  L G++    AA   HS  + ++G V+ +G  +  ++   
Sbjct: 177 ---------TTNRPVPVQVGGLSGIRA--VAASSDHSLAVRDDGTVWAWGINSSGQLGDG 225

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             N    P  ++ L   + V  G  ++  +   G ++ WG N +G LG G+     +P R
Sbjct: 226 TTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGR 285

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
           V+G      V     S++    G  H  A+  G    W W          G++  GQLG 
Sbjct: 286 VKGLSEVVEVSAAKYSLL----GSAHVLAV-RGDGTVWAW----------GNNGSGQLGD 330

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGF 420
           G   D + P  V+  + VKA+ V   F
Sbjct: 331 GTTTDRLTPVQVSELDGVKAIAVGNSF 357


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 20  GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 79

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WGKNS+GQLGLGK+  
Sbjct: 80  GIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFP 139

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 140 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 192

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 193 PVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQ 252

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 253 LVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 148/308 (48%), Gaps = 35/308 (11%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA 137
           G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S G  HS A
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +   G ++ WG  S GQLG+G+       IP K++ L+ I   Q A G   S+A++  G+
Sbjct: 62  VCHKGRVFAWGAASEGQLGIGELKETTF-IPKKIKTLADIKIIQVACGHYHSLALSEDGQ 120

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  +G
Sbjct: 121 VFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 172

Query: 258 RVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
             + +G     ++    GN+A     +P L+  L     V   CG  HT VLT  G+++T
Sbjct: 173 TSFGWGSNNAGQLALS-GNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFT 231

Query: 312 WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEG 366
           +G N  G LG  S      P   ER++G  S+            + CG  HT A   + G
Sbjct: 232 FGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQ------------IDCGSYHTLAYVYTTG 279

Query: 367 KILTWGWG 374
           +++++G G
Sbjct: 280 QVVSFGRG 287



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 147/303 (48%), Gaps = 38/303 (12%)

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           +G HHS  +  DG +   G NS GQ  LG+K       P ++  L  +     + G E S
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +AV   G+V +WGA   G+LG G+       L+ T+ + P+ IK L  +K+   A G  H
Sbjct: 60  LAVCHKGRVFAWGAASEGQLGIGE-------LKETT-FIPKKIKTLADIKIIQVACGHYH 111

Query: 250 SACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           S  + E+G+V+ +G  +  ++     F      +R   +  +P + +V  GG H+  L+ 
Sbjct: 112 SLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAHSFALSL 170

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G  + WGSN  G L +   +   +P +   P     +  +  S+V +SCG++HTA ++ 
Sbjct: 171 SGTSFGWGSNNAGQLALSGNN---APVQRYKPVLVGALKTL--SVVFISCGYEHTAVLTQ 225

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFNH 422
           +GK+ T+            G +S GQLGH +  +   P +V   E ++ L  Q+ CG  H
Sbjct: 226 DGKVFTF------------GDNSYGQLGHDSTAEKRGPQLV---ERIEGLVSQIDCGSYH 270

Query: 423 TGA 425
           T A
Sbjct: 271 TLA 273



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 14/230 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG    G+LG+G L E+ + P          +  +ACG  H+L L+E G V++ 
Sbjct: 67  RVFA--WGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSW 124

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 125 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 184

Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L    A V    P  V  L  +     + G+E +  +T  GKV ++G    G+LGH  
Sbjct: 185 LALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +   G         P+L++ +EG+  +I    +   A +   G+V  FG
Sbjct: 245 TAEKRG---------PQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 124 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 183

Query: 102 QLGISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ +  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 184 QLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHD 243

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             A K    P  VE + G+ ++     +     V   G+V+S+G G
Sbjct: 244 STAEK--RGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 287


>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 567

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 168/400 (42%), Gaps = 39/400 (9%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           ST    F   WG  D G+LG GS      P+  S     ++ A+A G  H+L LT  G V
Sbjct: 50  STAVSEFLLAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGTV 109

Query: 93  YATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            A G N FGQLG    I  S  P+ +S      V  ++ G  HS A+T  G +  WG N 
Sbjct: 110 LAWGTNHFGQLGDGTLIDRS-APVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNG 168

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG G    +  P+  +    SG+     A     S+AVT  G  L+WG  G+G+LG 
Sbjct: 169 VGQLGDGSTTRRTTPV--EAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGD 226

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G          + +  TP  +    G +V   AAG LHS  +   G    +G     ++ 
Sbjct: 227 GS---------TINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQL- 276

Query: 272 FQEGNHARRPSLIS-KLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
             +G    R + +S  LP   E   VV G  H+  LT+ G    WG N  G LG G    
Sbjct: 277 -GDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGS- 334

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 386
            +S E V     E  +    T   + S    HT AI+ +G  L WG       F      
Sbjct: 335 -NSSEAV-----EVSLPTGTTLAAIASRDSDHTIAIAGDGTALAWG----SNIF------ 378

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             GQLG G   +   P  V     +  L  + G +HT AL
Sbjct: 379 --GQLGDGTTTNPSTPVPVALPTGITLLTTAAGSDHTLAL 416



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 116/299 (38%), Gaps = 38/299 (12%)

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           H   +  V   L  WGKN NGQLG G      +PI   V    G      A G   S+A+
Sbjct: 46  HKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPI--AVSLPLGTTVTAVAAGRFHSLAL 103

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G VL+WG    G+LG G                P  +    G  V   AAG +HS  
Sbjct: 104 TSAGTVLAWGTNHFGQLGDGTL---------IDRSAPVEVSLPPGTTVTAVAAGGVHSMA 154

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGE 308
           +   G V  +G   V ++   +G+  RR + +  +  S      V     H+  +TS G 
Sbjct: 155 LTSVGTVLAWGGNGVGQL--GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGA 212

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGK 367
              WG N  G LG GS     +P  V  P          T +  ++ G  H+ A+ S G 
Sbjct: 213 ALAWGLNGTGQLGDGSTINRSTPVSVALPLG--------TEVTAIAAGRLHSLAVTSVGA 264

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            L WG+ G+            GQLG G  ++   P  V      +   V  G  H+ AL
Sbjct: 265 ALAWGYNGT------------GQLGDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAAL 311


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4204 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLA-GGEQSLFAVTPDGKLFATGYGSG 4261

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T DGE+Y WG+  +G+LG 
Sbjct: 4262 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4320

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4321 GNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4374

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4375 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4424

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4425 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4483 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDAGEVYTW----------- 4520

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 4521 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4563



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3216 LGHGDN-ATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3274

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3275 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3330

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3331 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3381

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3382 NKKPALVIGLDAVFVNRVACGSSHS 3406



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 135/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4290 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMS--VADIACGS 4347

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4348 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4405

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4406 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4456

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4457 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4516

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 4517 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 4565

Query: 366  GKI 368
             ++
Sbjct: 4566 SQL 4568



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 168/356 (47%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3085 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3143

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G ++   +  P  VE L     +  A G   S A++ 
Sbjct: 3144 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3201

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  +         ++  P+L+  L G +V   A G     +  
Sbjct: 3202 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVTALHGRRVIQVACGSRDAQTLA 3252

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3253 LTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3312

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 3313 TWGKGDYYRLGHGGDQHVRKPQPIAGLRGR--------RVIHVAVGALHCLAVTDAGQVY 3364

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3365 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3408



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4310 WGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4370 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4427

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4428 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4484

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G VY +GD    ++        +
Sbjct: 4485 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4537

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4538 RPRLVAALQGKHIVKVTCGSAHTLALST 4565



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + +  P +  A + H +   AL  G AHTL LT  G VYA G  D+
Sbjct: 692 WGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY 751

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + +   SL+PL I  L + V ++  G   S A+T +G+LY WGK S     L ++
Sbjct: 752 GKLG-NGSCNSSLQPLLIECLPR-VQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVER 809

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +   +P  +  L        A+G    +A++  G++  WG   + ++
Sbjct: 810 NVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           C G H L +      Y+ G+ D  +LG  +     L P +I  L + V  +  G  +S+A
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRRVQSVYCGCSYSAA 682

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT+ G LY WG+ + G+LG G    +   +P  V  L        ALG     ++ +T G
Sbjct: 683 ITLRGNLYTWGRGTYGRLGHGNSDDQC--MPAMVMALKDHQVLDVALGSGDAHTLCLTRG 740

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG G  G+LG+G  +S L          P LI+ L  V+   A + F  S  +  
Sbjct: 741 GLVYAWGDGDYGKLGNGSCNSSL---------QPLLIECLPRVQRVFAGSQF--SLALTC 789

Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            G++Y +G  +    +++ +       P LI+ L +     V  G  H   L+S GE++ 
Sbjct: 790 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFG 849

Query: 312 WGSNENGCLGIGSI---DVLHSPERVQGP 337
           WG N+N  +   S+    +L  P +V  P
Sbjct: 850 WGRNDNQQICPASVCSEPLLRQPIQVTLP 878



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 31/248 (12%)

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H  A+  +   Y WG   + +LG G   A+   +PTK+E L     +    G   S A+
Sbjct: 627 RHFLAVDSNHNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVR-RVQSVYCGCSYSAAI 683

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
           T  G + +WG G  GRLGHG          S  +  P ++  L+  +V   A  +G  H+
Sbjct: 684 TLRGNLYTWGRGTYGRLGHGN---------SDDQCMPAMVMALKDHQVLDVALGSGDAHT 734

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            C+   G VY +GD    K+     N + +P LI  LP  + V  G   +  LT  G+LY
Sbjct: 735 LCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQLY 794

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSCGWKHTAAI-S 364
           +WG  +  CLG   ++       VQG      V ++ TS     IV V+ G  H  A+ S
Sbjct: 795 SWG--KASCLGHQLVE-----RNVQG----CSVPRLITSLQHKRIVHVAVGVAHCLALSS 843

Query: 365 EGKILTWG 372
            G+I  WG
Sbjct: 844 NGEIFGWG 851



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 126/290 (43%), Gaps = 38/290 (13%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT  + +S +     A G +    V+  GKV + G 
Sbjct: 3047 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3104

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3105 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3155

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+     +   +P L+  L   +  ++ CG  H+  ++S GELYTWG  E G 
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISE-GKILTWGWGGS 376
            LG G       P+ V               ++ V+CG +   T A++E G + +WG    
Sbjct: 3216 LGHGDNATQLKPKLVTALHGR--------RVIQVACGSRDAQTLALTEDGAVFSWG---- 3263

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G F        G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3264 DGDF--------GKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLAL 3305



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 16/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG G   +R  P    +  +  ++++ CG +++  +T  G +Y  G   +G+
Sbjct: 641 WGVGDSRRLGHGDCHARELPTKIESLVRR-VQSVYCGCSYSAAITLRGNLYTWGRGTYGR 699

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    +  + ++    +V+ ++  +G  H+  +T  G +Y WG    G+LG G  
Sbjct: 700 LGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSC 759

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
            + + P+   +ECL  +  ++   G + S+A+T  G++ SWG      LGH   E ++ G
Sbjct: 760 NSSLQPL--LIECLPRV--QRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQG 813

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    PRLI  L+  ++   A G  H   +  NG ++ +G
Sbjct: 814 C------SVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 22/126 (17%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   + S    Y+WG  ++  LG G       P +++          +   +  V 
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIES---------LVRRVQSVY 674

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  ++AAI+  G + TWG     GT+        G+LGHGN  D   P +V   ++ + 
Sbjct: 675 CGCSYSAAITLRGNLYTWG----RGTY--------GRLGHGNSDDQCMPAMVMALKDHQV 722

Query: 414 LQVSCG 419
           L V+ G
Sbjct: 723 LDVALG 728


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 156/341 (45%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKM--LFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++  L  +G    RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G I+    P  V+             ++  ++CG   TAAI
Sbjct: 385 GDIEDRKVPTTVEALRDR--------AVRHIACGANFTAAI 417



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 59/371 (15%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGDLKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCG 356
             T  LT+ G+++T G++  G LG  +++    P  V+        D+I +  VL ++CG
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLG--NLNSDGRPCLVE--------DKIASEHVLQIACG 358

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   PT V    +     
Sbjct: 359 SYHVAVLTSRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAVRH 406

Query: 416 VSCGFNHTGAL 426
           ++CG N T A+
Sbjct: 407 IACGANFTAAI 417



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
            R+ GP            I  VSCG  HTA I S G++ T+G G            S G 
Sbjct: 175 RRISGPLEG-------LQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHG+      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 158/341 (46%), Gaps = 37/341 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  + ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 102 WGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNA 161

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG      V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 162 GLLGHGSNVSHWI-PKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 220

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
            +A+     P +VE L G+ T   + G   + AV            GK+ +WG G   RL
Sbjct: 221 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 278

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  I  L       AA G   +  +  +G ++  G  +V  
Sbjct: 279 GHGDRSSKL---------KPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-SVYG 328

Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EV CG YH  VLT+ GE+YTWG   NG LG G I 
Sbjct: 329 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIA 388

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
               P  V     E+  D+   S+  V+CG   TAAI + K
Sbjct: 389 DRKVPTLV-----EALRDR---SVKRVACGSSFTAAICQHK 421



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 173/375 (46%), Gaps = 58/375 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T    V+  G    G+LG     N+    +P  +  L    V+ I+ G 
Sbjct: 83  VACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNV---FQPRLVESLSICNVELIACGE 139

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   +
Sbjct: 140 FHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLDGLPVSTVSCGTWHT 197

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG         R++  Y P+ ++ L+G++    + G  H
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGN--------RASCSY-PKEVESLKGLRTISVSCGVWH 248

Query: 250 SACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
           +A + E         +G+++ +GD   DK     G+ + +  P+ I  L  Y+  +  CG
Sbjct: 249 TAAVVEVIISQSNASSGKLFTWGDG--DKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACG 306

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVLVSC 355
              T  LT+ G ++T GS+  G LG  + D         G +     +Q+    +V V+C
Sbjct: 307 HTLTIGLTTSGHIFTVGSSVYGQLGNPNND---------GRYPRLVEEQLGGGGVVEVAC 357

Query: 356 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H A ++  G++ TWG G +            G+LGHG+  D   PT+V    +    
Sbjct: 358 GSYHVAVLTNAGEVYTWGKGAN------------GRLGHGDIADRKVPTLVEALRDRSVK 405

Query: 415 QVSCGFNHTGALLEY 429
           +V+CG + T A+ ++
Sbjct: 406 RVACGSSFTAAICQH 420



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 26/214 (12%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P+ ++    + V   A G  H+A +     V+ +G+    ++    G +  +P 
Sbjct: 63  TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPR 122

Query: 283 LISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGP 337
           L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +V H  P+RV GP
Sbjct: 123 LVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS-NVSHWIPKRVSGP 181

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
               PV         VSCG  HTA I S G++ T+G     GTF        G LGHGN 
Sbjct: 182 LDGLPVS-------TVSCGTWHTALITSSGQLYTFG----DGTF--------GVLGHGNR 222

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
               +P  V   + ++ + VSCG  HT A++E +
Sbjct: 223 ASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVI 256



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 54/306 (17%)

Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  + G  + A        + +P  +E    +     A G + +  VT
Sbjct: 35  GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG  +++         + PRL++ L    V++ A G  H+  +
Sbjct: 95  RQSEVFTWGEECSGRLGHGTGTNV---------FQPRLVESLSICNVELIACGEFHTCAV 145

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S     LP S  V CG +HT ++TS G
Sbjct: 146 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-TVSCGTWHTALITSSG 204

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-- 365
           +LYT+G    G LG G+      P+ V+               + VSCG  HTAA+ E  
Sbjct: 205 QLYTFGDGTFGVLGHGNRASCSYPKEVESLKG--------LRTISVSCGVWHTAAVVEVI 256

Query: 366 --------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
                   GK+ TWG G  +            +LGHG+    + PT +    +    + +
Sbjct: 257 ISQSNASSGKLFTWGDGDKY------------RLGHGDRSSKLKPTCIPSLIDYNFHKAA 304

Query: 418 CGFNHT 423
           CG   T
Sbjct: 305 CGHTLT 310


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 156/341 (45%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKM--LFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++  L  +G    RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G I+    P  V+             ++  ++CG   TAAI
Sbjct: 385 GDIEDRKVPTTVEALRDR--------AVRHIACGANFTAAI 417



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 59/371 (15%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGDLKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCG 356
             T  LT+ G+++T G++  G LG  +++    P  V+        D+I +  VL ++CG
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLG--NLNSDGRPCLVE--------DKIASEHVLQIACG 358

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   PT V    +     
Sbjct: 359 SYHVAVLTSRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAVRH 406

Query: 416 VSCGFNHTGAL 426
           ++CG N T A+
Sbjct: 407 IACGANFTAAI 417



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
            R+ GP            I  VSCG  HTA I S G++ T+G G            S G 
Sbjct: 175 RRISGPLEG-------LQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHG+      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4274

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4275 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4332

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4333 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDSGEVYTW----------- 4370

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 4371 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + VVQ++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3157 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3215

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3216 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3271

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3272 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3322

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3323 NKKPALVIGLDAVFVNRVACGSSHS 3347



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 170/357 (47%), Gaps = 43/357 (12%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYH 133
            GG+ +LF+ ++ G VYA G    G+LG  ++ N+   + L  LR   +KK  V + +G  
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGK 3083

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H+ A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSA 251
              G++ +WG G  GRLGHG          +T++  P+L+  L G +V   A G     + 
Sbjct: 3142 SQGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
             + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE+
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
            +TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++
Sbjct: 3253 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVTDAGQV 3304

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
              WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3305 YAWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 135/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4197

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4255

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4306

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4307 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4366

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 4415

Query: 366  GKI 368
             ++
Sbjct: 4416 SQL 4418



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4334

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4335 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4388 RPRLVAALQGKHIVKVTCGSAHTLALST 4415



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 136/320 (42%), Gaps = 46/320 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           +  +K +AC     L L++ G +Y   L                EPL +  +  +V  IS
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHDVF-IS 618

Query: 130 TGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              H    H  AI  +   Y WG   + +LG G   A+ +P  TK+  L     +    G
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAALEQHCVQSVYCG 676

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIA- 243
              S A+T GG +L+WG G   RLGHG          S     P L+  L + + V +A 
Sbjct: 677 CSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLVVALSDHMVVDVAL 727

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            +G  HS  +   G V+ +GD    K+     N + +P L+  LP  + V  G   +  L
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVAL 787

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSCGWK 358
           +S G+LYTWG  +  CLG   ++       VQG      V ++ +S     IV V+    
Sbjct: 788 SSEGQLYTWG--KATCLGHQLVE-----RSVQG----CSVPRLVSSLQHKRIVDVAVSVA 836

Query: 359 HTAAI-SEGKILTWGWGGSH 377
           H  A+ S G++  WG   S 
Sbjct: 837 HCLALSSSGEVFGWGRNDSQ 856



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + R  P +  A   H +   AL  G AH+L LT  G V+A G  D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N   SL+P+ +  L + V ++  G   S A++ +G+LY WGK +     L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           + +   +P  V  L        A+     +A++  G+V  WG   S ++     SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
           C G H L +      Y+ G  +  +LG  +    ++ P +I+ L++  VQ +  G  +S+
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 681

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
           AIT  G L  WG+ +  +LG G    + +P  T V  LS       ALG     S+A+T 
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 739

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG G  G+LG+G  +  L          P L++ L  V+   A + F  S  + 
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SVALS 788

Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
             G++Y +G       +++ +       P L+S L +    +V     H   L+S GE++
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 848

Query: 311 TWGSNENGCL---GIGSIDVLHSPERVQGP 337
            WG N++  +    + S  +L +P  V  P
Sbjct: 849 GWGRNDSQQICPASVSSEPLLRTPILVSLP 878



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 41/309 (13%)

Query: 128  ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            +ST +  ++A     +   + +WG N   QLG G K +KV  +PT  + +S +     A 
Sbjct: 2969 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 3026

Query: 185  GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
            G +    V+  GKV + G G +GRLG G   ++           P  +  L    VK  A
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLRQYVVKKVA 3077

Query: 245  --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
              +G  H+  +  +G+V+ +G+    K+         +P L+  L   +  +V CG  H+
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137

Query: 301  CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK-- 358
              ++S GELYTWG  E G LG G       P+ V               +V V+CG +  
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR--------RVVQVACGSRDA 3189

Query: 359  HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
             T A++E G + +WG     G F        G+LG G       P  +     +  +Q+ 
Sbjct: 3190 QTLALTEDGAVFSWG----DGDF--------GKLGRGGSEGSDTPHEIERLSGIGVVQIE 3237

Query: 418  CGFNHTGAL 426
            CG   + AL
Sbjct: 3238 CGAQFSLAL 3246



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 21/112 (18%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   + S    Y+WG+ E+  LG G       P ++        ++Q C   V   
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAA------LEQHCVQSVY-- 674

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           CG  ++AAI+  G +LTWG     GT++        +LGHGN  D   PT+V
Sbjct: 675 CGCSYSAAITCGGNLLTWG----RGTYA--------RLGHGNSDDRSLPTLV 714



 Score = 44.7 bits (104), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 89/225 (39%), Gaps = 31/225 (13%)

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVYIFGDRAVDK 269
           QE  +  +  +  E  P  ++E+    V I+ AG     H   ID N   Y +G    D 
Sbjct: 589 QEGKLYTWRLAKPEAEPLPMEEV-AHDVFISIAGHCEGRHFLAIDSNHNAYSWGT-GEDH 646

Query: 270 MLFQEGNHARR-PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L     HAR  P+ I+ L     + V CG  ++  +T GG L TWG      LG G+ D
Sbjct: 647 RLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSD 706

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
               P  V        VD      V +  G  H+ A+ SEG +  WG G           
Sbjct: 707 DRSLPTLVVALSDHMVVD------VALGSGDAHSLALTSEGLVFAWGDGDY--------- 751

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKAL----QVSCGFNHTGAL 426
              G+LG+GN    + P +V     V+ +    Q S   +  G L
Sbjct: 752 ---GKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQL 793


>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           impatiens]
          Length = 539

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 28/289 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
           GN  YG LG G  +S   P    A    S+K  A G G H L LTE G VY+ G ND+ +
Sbjct: 52  GNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111

Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG +++    L P  +  +   K VV I+ G HHS A+T  GE+Y WG N +GQ+G G  
Sbjct: 112 LG-NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTI 170

Query: 161 AAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + V PIP  +   L+G      + G   SVAVT  G+V SWG  G G+LG G       
Sbjct: 171 LSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLG------- 223

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               TS+  P+ +     + ++    G++H+  + + G +Y++G  +  ++     ++  
Sbjct: 224 --NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVW 281

Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
            P   +KL   E     ++V   YH  +  ++ G  ++ WG     CLG
Sbjct: 282 IP---TKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ----CLG 323



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 139/298 (46%), Gaps = 25/298 (8%)

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
           TL +T+   VY  G N +G LG  +    ++ P +I  L  K V   + G   H  A+T 
Sbjct: 39  TLLVTKDDMVYGIGNNTYGCLGTGDTQS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVL 199
           +G++Y WG N   +LG   K+      PT V   L   F    A G   S+A+T  G++ 
Sbjct: 98  EGKVYSWGYNDYCELG--NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIY 155

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGR 258
           +WG   SG++G        G + ST +  P+L+   L G KV   + G   S  + ++G 
Sbjct: 156 AWGHNVSGQVG-------CGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGE 208

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           VY +G   V ++          P  ++       E+VVCG  HT  L+  G LY WG+N 
Sbjct: 209 VYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANS 268

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA-AISEG-KILTWG 372
            G LG+ +   +  P +++ P     +D       +V+  + H + A+SEG +I  WG
Sbjct: 269 YGQLGLNTDSNVWIPTKLEVPEMGRILD-------IVTSHYHHISLAMSEGNRIFMWG 319



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G++G G++ S  +P+   +        +  ++CG + ++ +T++G VY+ G N 
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNG 216

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG+  N    +EP +++   K V++ +  GY H+ A++ +G LY+WG NS GQLGL 
Sbjct: 217 VGQLGLG-NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLN 275

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
             +   IP   +V  +  I     +     S+A++ G ++  WG
Sbjct: 276 TDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 141/332 (42%), Gaps = 60/332 (18%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           LEP  IS ++  +V      + +  +T D  +Y  G N+ G LG G   + + P   K+E
Sbjct: 18  LEPKFISNVRMAIVY-GKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYP--KKIE 74

Query: 173 CLSGIFTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPR 230
            L G   K  A G     +A+T  GKV SWG      LG+          +ST+E  TP 
Sbjct: 75  ALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGN----------KSTNEGLTPT 124

Query: 231 LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------------LFQE 274
           L+  +   K  V IA  G  HS  +   G +Y +G     ++              L   
Sbjct: 125 LVPSVLDDKFVVDIACGGH-HSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNV 183

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           G + ++   IS         CG   +  +T  GE+Y+WG N  G LG+G+      P++V
Sbjct: 184 GLNGKKVVHIS---------CGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKV 234

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
              F++  +++       V CG+ HT A+S+  +L + WG           +S GQLG  
Sbjct: 235 -ATFAKIVIEK-------VVCGYMHTLALSDEGVL-YVWGA----------NSYGQLGLN 275

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            D +   PT +   E  + L +     H  +L
Sbjct: 276 TDSNVWIPTKLEVPEMGRILDIVTSHYHHISL 307



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LGLG+  S+  P   + F K  ++ + CG  HTL L++ G +Y  G N +GQ
Sbjct: 212 WGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQ 271

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
           LG++ +    +   L +  + + +  +++ YHH S A++    ++MWG+       LG+ 
Sbjct: 272 LGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ------CLGQS 325

Query: 161 AAKVIPIPTKVECL 174
               +P  T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 144/330 (43%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3990 GYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4050 KLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4109

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4110 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4161

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I  L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4162 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4218

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4219 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHAL 4278

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4279 QGK--------KITRVACGSAHTLAWSTAK 4300



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 178/396 (44%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C +        LA GG  TLF +T  G VY+TG    G
Sbjct: 3937 WGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 3995

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3996 RLGIGGTDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L GI     A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4054 GNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4107

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P++++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4108 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4162

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4163 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4222

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A S+ G++ TWG             +  G
Sbjct: 4223 VAALQG-----------KKIISIATGSLHCVACSDKGEVFTWG------------DNDEG 4259

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4260 QLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4295



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 203/425 (47%), Gaps = 48/425 (11%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
            +L  D ++  +    +R   +  Q+    +WG  D  +LG G   S+ + PV      K 
Sbjct: 2926 FLASDWEVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSK- 2983

Query: 72   SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ- 127
             LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++  Y++ EP  I  L + V++ 
Sbjct: 2984 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD--YNMCEPKLIPFLSQYVIKK 3040

Query: 128  --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              + +G  H+ A+T DG+++ WG+  +G+LG G      +  P  +E L     +  A G
Sbjct: 3041 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN--CTTLDKPRLIESLKSKRIRDIACG 3098

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
               S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A 
Sbjct: 3099 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TATQMKPKLVQALSGQRVVQVAC 3149

Query: 246  GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
            G     +  +  +G VY +GD    K+     +    P L+ +L      +V CG   + 
Sbjct: 3150 GSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSL 3209

Query: 302  VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
             LT  GE++TWG  +   LG G+   +  P  V+G   +         IV V+ G  H  
Sbjct: 3210 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGK--------KIVHVAVGALHCL 3261

Query: 362  AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
            A+++ G++  WG         ++ H   GQ G+G  +    P++V+  ++ +  +VSCG 
Sbjct: 3262 AVTDTGQVYAWG---------DNDH---GQQGNGTTIVNRKPSLVHELDDTRMNRVSCGS 3309

Query: 421  NHTGA 425
            +H+ A
Sbjct: 3310 SHSIA 3314



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 165/365 (45%), Gaps = 72/365 (19%)

Query: 88   ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            +   VY  GLND  QLG          +   +   L+P+ I+G  K +  +S        
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQ------- 3001

Query: 138  ITVDGELYMWGKNSNGQLGLGKK----AAKVIPIPTKVECLSGIFTKQAAL--GFEQSVA 191
               +G+LY  G+ +NG+LGLG        K+IP       LS    K+ A+  G + ++A
Sbjct: 3002 ---EGKLYACGEGTNGRLGLGDDYNMCEPKLIPF------LSQYVIKKVAVHSGGKHALA 3052

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T  GKV SWG G  G+LGHG           T+   PRLI+ L+  +++  A G  HSA
Sbjct: 3053 LTQDGKVFSWGEGEDGKLGHGN---------CTTLDKPRLIESLKSKRIRDIACGSGHSA 3103

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGG 307
             I  NG +Y +G     ++   +     +P L+  L      +V CG     T  LT+ G
Sbjct: 3104 AIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADG 3163

Query: 308  ELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             +YTWG  + G LG G  D  ++P   +R+ G             +V V CG + + A++
Sbjct: 3164 CVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNG-----------LGVVQVECGAQFSLALT 3212

Query: 365  E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
            + G++ TWG G               +LGHGND     PT+V      K + V+ G  H 
Sbjct: 3213 KYGEVWTWGKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHC 3260

Query: 424  GALLE 428
             A+ +
Sbjct: 3261 LAVTD 3265



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 117/243 (48%), Gaps = 15/243 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G H L LT+ GCVY+ G  D G+LG  +NI +    L  + L+K ++ I+ G  +S+A++
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS 577

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
             GELY WG+ + G+LG G      + +PT V  L G      A G    Q++ VT  G 
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGI 635

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LG G          S    TP+++ +L  + V     G   SA +   G
Sbjct: 636 VFSWGDGDYGKLGRGG---------SDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      H R P LI  L     +++  GG H   LT    +Y WG N
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRN 746

Query: 316 ENG 318
           + G
Sbjct: 747 DYG 749



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 160/347 (46%), Gaps = 44/347 (12%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
            +G +Y  G N  GQLG  E     L  P   +S L+   +Q++ G     A+T DG++Y 
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3988

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
             G  + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G
Sbjct: 3989 TGYGAAGRLGIG--GTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG 4046

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
              G+LGHG     L + R      P+L+++L G+++   A G  HSA I   G +Y +G 
Sbjct: 4047 DDGKLGHGNR---LSYDR------PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGK 4097

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
                ++   + +   RP ++  L   +  +V CG     T  +T    +++WG  + G L
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4157

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHG 378
            G G  D    P +         +D +    ++ V CG + + A++  G + TWG G  H 
Sbjct: 4158 GRGGSDGCKVPLK---------IDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH- 4207

Query: 379  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                       +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4208 -----------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4243



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 139/314 (44%), Gaps = 39/314 (12%)

Query: 124  EVVQIS-TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            EV+Q   T    + A      +Y+WG N   QLG G K +K I IP + E LS +     
Sbjct: 2932 EVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSK-IKIPVRSEVLSKLKPIHI 2989

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G + ++           P+LI  L    +K 
Sbjct: 2990 AGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMC---------EPKLIPFLSQYVIKK 3040

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY 298
             A  +G  H+  + ++G+V+ +G+    K+         +P LI  L      ++ CG  
Sbjct: 3041 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSG 3100

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            H+  + S GELYTWG  E G LG G       P+ VQ    +         +V V+CG +
Sbjct: 3101 HSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQ--------RVVQVACGSR 3152

Query: 359  HTAAIS---EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
                +S   +G + TWG     G F        G+LG G       P +V+    +  +Q
Sbjct: 3153 DAQTMSLTADGCVYTWG----DGDF--------GKLGRGGSDGCYTPLLVDRLNGLGVVQ 3200

Query: 416  VSCGFNHTGALLEY 429
            V CG   + AL +Y
Sbjct: 3201 VECGAQFSLALTKY 3214



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 129/289 (44%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AK I +P   E LS +   Q A G +   AVT  GKV S 
Sbjct: 3932 GAIYGWGHNHRGQLG-GLEGAK-IKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 3989

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G +GRLG G   S++          P L++ ++ V +K  A  +G  H   +   G V
Sbjct: 3990 GYGAAGRLGIGGTDSVM---------VPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP L+  L   E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 4041 YSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRY 4100

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  D    P+ V+       +D  C S      G   T  +++   + W WG   
Sbjct: 4101 GRLGHGDSDDQLRPKVVEALQDYKVIDVACGS------GDAQTLCVTDDDNV-WSWG--- 4150

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 4151 -----DGDY--GKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4192



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 15/248 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G   S   P +     + ++  +ACG  ++  L+ +G +Y  G  ++G+
Sbjct: 533 WGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGR 592

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
           LG   N   ++ P  ++ LK   VV ++ G   S    +T  G ++ WG    G+LG G 
Sbjct: 593 LGHGSNDDVTV-PTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG 651

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V+ L  I   +   G + S A+T  G+V +WG G + RLGHG E  +  
Sbjct: 652 SDGS--KTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHV-- 707

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+LI+ L   K+K  + G  H   + E+  VY +G     ++    G    
Sbjct: 708 -------RYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVS 760

Query: 280 RPSLISKL 287
            PSL   L
Sbjct: 761 EPSLCPTL 768



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 137/320 (42%), Gaps = 38/320 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P  C A  +  +K L C     L L+ +G VY        Q            P R+   
Sbjct: 456 PFYCDAIAELGIKHLCCTERALLILSLSGNVYIMYYGSETQY-----------PQRMHSF 504

Query: 122 KKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             + V +   +    H  A+T DG +Y WG    G+LG G   +     P  +E L    
Sbjct: 505 SDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISH--DEPKLIETLLEKN 562

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               A G   S A++  G++ +WG G  GRLGHG    +           P L+  L+G 
Sbjct: 563 IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDV---------TVPTLVTTLKGH 613

Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
            V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL       V 
Sbjct: 614 MVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVF 673

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CGG  +  LT+ GE+YTWG  +   LG G+ + +  P+ +     ES  D+    I  +S
Sbjct: 674 CGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLI-----ESLRDK---KIKDLS 725

Query: 355 CGWKHTAAISEGKILTWGWG 374
            G  H  A++E + + +GWG
Sbjct: 726 VGGTHILALTEDQFV-YGWG 744



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 522 LALTQDGCVYSWGNGDGGRLGHGD---------NISHDEPKLIETLLEKNIIFIACGSTY 572

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  +G +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 573 SAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTA 632

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G +++WG  + G LG G  D   +P+ V              ++V V CG + +AA++ 
Sbjct: 633 SGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLD--------INVVRVFCGGQFSAALTA 684

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G ++            +LGHGN+    +P ++    + K   +S G  H  
Sbjct: 685 RGEVYTWGKGDAY------------RLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHIL 732

Query: 425 ALLE 428
           AL E
Sbjct: 733 ALTE 736



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG G+     +P +        +  +A G  H L +T+TG VYA G ND GQ
Sbjct: 3220 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA-ITVD 141
             G    I  + +P  +  L    + ++S G  HS A I VD
Sbjct: 3280 QGNGTTI-VNRKPSLVHELDDTRMNRVSCGSSHSIAWILVD 3319


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 174/381 (45%), Gaps = 59/381 (15%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LGLG +E           W+P         ++  +ACG  HTLFLT +G VY
Sbjct: 6   WGNASHGQLGLGGIEDEQILTPSKMPWQP-------DSAVNQIACGHRHTLFLTASGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND+ QLG   +   S  PL+I  L   V+ QI+ G  HS A+T  G++  WG N  
Sbjct: 59  ACGSNDYAQLGHELS---SKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG       V+ +P  V  L      Q A G   S+A+T  G++ +WG+   G+LG  
Sbjct: 116 GQLGHASD-QDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLG-- 172

Query: 213 QESSILGFLRSTSEY----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
                   +++ SE      P L+  L G+ V+  A G  HS  I ++  V+ +G     
Sbjct: 173 --------VKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224

Query: 269 KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++   +  +   P+ +  L       V CG   +  LT+ G ++T G+   G LG G   
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCG 284

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 384
               P  V        ++ + ++I  V+CG +HT A+  + G+I  +G G          
Sbjct: 285 NEMLPRMV--------MELMGSTISQVACGNRHTLAMVPARGRIYGFGLG---------- 326

Query: 385 HSSGGQLGHGNDVDYIHPTIV 405
             S GQLG  N      P +V
Sbjct: 327 --SSGQLGTRNTKSLNLPQMV 345



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 138/300 (46%), Gaps = 18/300 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L S+ RP+         +  +ACG  H++ LTE G V + G N+ GQL
Sbjct: 61  GSNDYAQLG-HELSSK-RPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+ K  +
Sbjct: 119 GHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGV-KTPS 177

Query: 163 KV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           ++     P  +  L GI  +  A G   S  ++    V  WG    G+LG   E      
Sbjct: 178 ELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------ 231

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++      +   
Sbjct: 232 ---TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML 288

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P ++ +L  S   +V CG  HT  +    G +Y +G   +G LG  +   L+ P+ V GP
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIGP 348



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 125/284 (44%), Gaps = 38/284 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+K+         Q A G   ++ +T  GKV + G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH             S   P  I EL    +   A G  HS  + E G+V  +
Sbjct: 62  SNDYAQLGH-----------ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSW 110

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A D+ + Q     R  +L+SK     ++ CG  H+  LT  GELY WGSN
Sbjct: 111 GDNECGQLGHASDQDVVQLPKTVR--ALVSKTVV--QIACGNNHSLALTCCGELYAWGSN 166

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
             G LG+ +   L    +   P   + +  +   +  ++CG  H+  IS+   + +GW  
Sbjct: 167 IYGQLGVKTPSELG---QCNAPMLLTTL--LGIPVRAIACGGNHSFLISKSSAV-FGW-- 218

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                   G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 219 --------GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 33/151 (21%)

Query: 285 SKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGP 337
           SK+P+       ++ CG  HT  LT+ G++Y  GSN+   LG  + S   L  PE V   
Sbjct: 28  SKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVD-- 85

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                    C  I  ++CG +H+ A++E G++L+WG             +  GQLGH +D
Sbjct: 86  ---------CV-ITQIACGSRHSMALTEWGQVLSWG------------DNECGQLGHASD 123

Query: 397 VDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
            D +  P  V    +   +Q++CG NH+ AL
Sbjct: 124 QDVVQLPKTVRALVSKTVVQIACGNNHSLAL 154


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4050 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4107

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4108 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4166

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4167 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4220

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4221 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4270

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4271 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4328

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4329 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDSGEVYTW----------- 4366

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 4367 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4409



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 19/264 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N+      L ++   + VVQ++ G   +   A+T DG ++ WG    G+LG G  
Sbjct: 3154 LGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3213

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                   P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +   
Sbjct: 3214 EGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV--- 3268

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--A 278
                    P+ I  L G +V   A G LH   + + G+VY +GD   D      GN    
Sbjct: 3269 ------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFVN 3320

Query: 279  RRPSLISKLP--YSEEVVCGGYHT 300
            ++P+L+  L   +   V CG  H+
Sbjct: 3321 KKPALVIGLDAVFVNRVACGSSHS 3344



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 135/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4136 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4193

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4194 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4251

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4252 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4302

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4303 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4362

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 4363 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 4411

Query: 366  GKI 368
             ++
Sbjct: 4412 SQL 4414



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 167/356 (46%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3023 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3081

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 3082 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 3139

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          + ++  P+L+  L G +V   A G     +  
Sbjct: 3140 QGELYTWGLGEYGRLGHGD---------NVTQLKPKLVVALAGRRVVQVACGSRDAQTLA 3190

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3191 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3250

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 3251 TWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVTDAGQVY 3302

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3303 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4156 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4216 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4273

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4274 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4330

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4331 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4383

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4384 RPRLVAALQGKHIVKVTCGSAHTLALST 4411



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 154/366 (42%), Gaps = 57/366 (15%)

Query: 32  SSTLQRRFAAL-WGNGDYGRLGLG-------SLESRWRPVVCSAFEKHSLKALACGGAHT 83
           S+T Q+R  AL W +    + G         S ES   P +   F+   +K +AC     
Sbjct: 525 STTPQQRIYALGWPSLSKDQQGFSAEPTLSWSGESTAVPTLSCRFQ---IKQVACCETQM 581

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH----HSSAIT 139
           L L++ G +Y   L                EPL +  +  EV  IS   H    H  AI 
Sbjct: 582 LILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHEVF-ISIAGHCEGRHFLAID 629

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            +   Y WG   + +LG G   A+ +P  TK+  L     +    G   S A+T GG +L
Sbjct: 630 SNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAALEQHCVQSVYCGCSYSAAITCGGNLL 687

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIA-AAGFLHSACIDENG 257
           +WG G   RLGHG          S     P L+  L + + V +A  +G  HS  +   G
Sbjct: 688 TWGRGTYARLGHGN---------SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 738

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            V+ +GD    K+     N + +P L+  LP  + V  G   +  L+S G+LY+WG  + 
Sbjct: 739 LVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSLALSSEGQLYSWG--KA 796

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSCGWKHTAAI-SEGKILTW 371
            CLG   ++       VQG      V ++ +S     IV V+    H  A+ S G++  W
Sbjct: 797 TCLGHQLVE-----RSVQG----CSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGW 847

Query: 372 GWGGSH 377
           G   S 
Sbjct: 848 GRNDSQ 853



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + R  P +  A   H +   AL  G AH+L LT  G V+A G  D+
Sbjct: 689 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 748

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N   SL+P+ +  L + V ++  G   S A++ +G+LY WGK +     L ++
Sbjct: 749 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVER 806

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           + +   +P  V  L        A+     +A++  G+V  WG   S ++     SS
Sbjct: 807 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 862



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
           C G H L +      Y+ G  +  +LG  +    ++ P +I+ L++  VQ +  G  +S+
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 678

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
           AIT  G L  WG+ +  +LG G    + +P  T V  LS       ALG     S+A+T 
Sbjct: 679 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 736

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG G  G+LG+G  +  L          P L++ L  V+   A + F  S  + 
Sbjct: 737 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SLALS 785

Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
             G++Y +G       +++ +       P L+S L +    +V     H   L+S GE++
Sbjct: 786 SEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 845

Query: 311 TWGSNENGCL---GIGSIDVLHSPERVQGP 337
            WG N++  +    + S  +L +P  V  P
Sbjct: 846 GWGRNDSQQICPASVSSEPLLRTPILVSLP 875



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 38/290 (13%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT  + +S +     A G +    V+  GKV + G 
Sbjct: 2985 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 3042

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3043 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3093

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P L+  L   +  +V CG  H+  ++S GELYTWG  E G 
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISE-GKILTWGWGGS 376
            LG G       P+ V        V      +V V+CG +   T A++E G + +WG    
Sbjct: 3154 LGHGDNVTQLKPKLV--------VALAGRRVVQVACGSRDAQTLALTEDGAVFSWG---- 3201

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G F        G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3202 DGDF--------GKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL 3243



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 21/112 (18%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   + S    Y+WG+ E+  LG G       P ++        ++Q C   V   
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAA------LEQHCVQSVY-- 671

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           CG  ++AAI+  G +LTWG     GT++        +LGHGN  D   PT+V
Sbjct: 672 CGCSYSAAITCGGNLLTWG----RGTYA--------RLGHGNSDDRSLPTLV 711



 Score = 45.1 bits (105), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 105/270 (38%), Gaps = 51/270 (18%)

Query: 169 TKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           T V  LS  F  KQ A    Q + ++  GK+ +W      RL             +  E 
Sbjct: 560 TAVPTLSCRFQIKQVACCETQMLILSQEGKLYTW------RL-------------AKPEA 600

Query: 228 TPRLIKELEGVKVKIAAAGFL---HSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSL 283
            P  ++E+   +V I+ AG     H   ID N   Y +G    D  L     HAR  P+ 
Sbjct: 601 EPLPMEEV-AHEVFISIAGHCEGRHFLAIDSNHNAYSWGT-GEDHRLGHGDTHARAVPTK 658

Query: 284 ISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           I+ L     + V CG  ++  +T GG L TWG      LG G+ D    P  V       
Sbjct: 659 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHM 718

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
            VD      V +  G  H+ A+ SEG +  WG G              G+LG+GN    +
Sbjct: 719 VVD------VALGSGDAHSLALTSEGLVFAWGDGDY------------GKLGNGNCNGSL 760

Query: 401 HPTIVNFGENVKAL----QVSCGFNHTGAL 426
            P +V     V+ +    Q S   +  G L
Sbjct: 761 QPILVESLPRVQRVFAGSQFSLALSSEGQL 790


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 138/295 (46%), Gaps = 33/295 (11%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
           GG H L L+  G VY+ G  D G+LG   N      P  I  L+ KEVV ++ G  HS+ 
Sbjct: 676 GGKHCLALSAEGEVYSWGEGDDGKLGHG-NKSSCERPRVIESLRGKEVVDVACGGAHSAC 734

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT  GELY WGK   G+LG G    ++ P   KVE LSG   +  A G    Q++ VT  
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQLRP--KKVEALSGWRVRCVACGSGDAQTLCVTDD 792

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
             V SWG G  G+LG G          S     P  +  L+G+ V     G   S  +  
Sbjct: 793 DCVWSWGDGDYGKLGRGG---------SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTA 843

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW 312
           +G VY +G     ++     +H RRP  ++ L   ++V+C   G  H    T  GE+YTW
Sbjct: 844 SGSVYTWGKGDYHRLGHGTDDHVRRPKRVAAL-QGKKVICIAVGSLHCVACTDTGEVYTW 902

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           G N+ G LG G+++ +H P  V   QG             I  VSCG  HT A S
Sbjct: 903 GDNDEGQLGDGTVNAIHKPRLVAALQG-----------KKINRVSCGSAHTVAWS 946



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 185/398 (46%), Gaps = 54/398 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL-ACGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P+ C A    +L+ +   GG  TLF +T  G VYATG    
Sbjct: 586 WGHNHRGQLGGVEGAKVKLPMPCEALS--ALRPIQVVGGEQTLFAVTADGKVYATGYGAG 643

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE L+   +KK VV  ++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 644 GRLGIGGTDSVSCPTLLESLQHVFIKKVVV--NSGGKHCLALSAEGEVYSWGEGDDGKLG 701

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G K++     P  +E L G      A G   S  +T  G++ +WG G  GRLGHG    
Sbjct: 702 HGNKSS--CERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGD--- 756

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+ ++ L G +V+  A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 757 ------SDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG 810

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  +  L       V CG   +  LT+ G +YTWG  +   LG G+ D +  P+
Sbjct: 811 SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPK 870

Query: 333 RV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
           RV   QG             ++ ++ G  H  A ++ G++ TWG             +  
Sbjct: 871 RVAALQG-----------KKVICIAVGSLHCVACTDTGEVYTWG------------DNDE 907

Query: 389 GQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGA 425
           GQLG G  V+ IH P +V   +  K  +VSCG  HT A
Sbjct: 908 GQLGDGT-VNAIHKPRLVAALQGKKINRVSCGSAHTVA 944



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 149/345 (43%), Gaps = 46/345 (13%)

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
           +G +   G N  GQLG  E     L P+    L     +Q+  G     A+T DG++Y  
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKL-PMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
           G  + G+  LG      +  PT +E L  +F K+  +  G +  +A++  G+V SWG G 
Sbjct: 639 GYGAGGR--LGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGHG +SS            PR+I+ L G +V   A G  HSACI  +G +Y +G  
Sbjct: 697 DGKLGHGNKSSC---------ERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKG 747

Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
              ++   + +   RP  +  L       V CG     T  +T    +++WG  + G LG
Sbjct: 748 RYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLG 807

Query: 322 IGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
            G  D    P RV   QG             ++ V CG + + A++  G + TWG G  H
Sbjct: 808 RGGSDGCKVPLRVDLLQG-----------MGVIRVECGSQFSVALTASGSVYTWGKGDYH 856

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                       +LGHG D     P  V   +  K + ++ G  H
Sbjct: 857 ------------RLGHGTDDHVRRPKRVAALQGKKVICIAVGSLH 889



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 126/289 (43%), Gaps = 32/289 (11%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G +  WG N  GQLG G + AKV  +P   E LS +   Q   G +   AVT  GKV + 
Sbjct: 581 GTILGWGHNHRGQLG-GVEGAKV-KLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRV 259
           G G  GRLG G   S+           P L++ L+ V +K  +  +G  H   +   G V
Sbjct: 639 GYGAGGRLGIGGTDSV---------SCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEV 689

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           Y +G+    K+     +   RP +I  L   E  +V CGG H+  +T+ GELYTWG    
Sbjct: 690 YSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRY 749

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           G LG G  D    P++V+       +       V    G   T  +++   + W WG   
Sbjct: 750 GRLGHGDSDDQLRPKKVEA------LSGWRVRCVACGSGDAQTLCVTDDDCV-WSWG--- 799

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                DG    G+LG G       P  V+  + +  ++V CG   + AL
Sbjct: 800 -----DGDY--GKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVAL 841


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 162/334 (48%), Gaps = 39/334 (11%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +   R    SA +   +K LA       H + LTE G V++ G  D+
Sbjct: 805  GEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY 864

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ++ G+ HS+ +T+DG+L+ +G    G+LG G 
Sbjct: 865  GKLG-HGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS 923

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
               K   IP +V  L      Q A G   +V V+     V + G G  G+LG G  S+  
Sbjct: 924  TTNK--KIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSA-- 979

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   + +P  I+ L  V +K  + G   +A +  +G++++FG    D+M    GN  
Sbjct: 980  -------KTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQ---DRMC---GNCE 1026

Query: 279  RR------PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
             R      P +++ L      ++  G  HT  LTS G +YTWGSN +G LG+G  + +  
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086

Query: 331  PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            P  V+   S   + QI       S G  H+AA S
Sbjct: 1087 PTLVES-LSGKNIRQI-------SAGRTHSAAWS 1112



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 181/398 (45%), Gaps = 55/398 (13%)

Query: 42   LWGNGDYGRL---GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            L+G G +G+L   G G L     P +  +F  H  + + CG   T  +   G V + G  
Sbjct: 754  LFGAGRHGQLAEVGSGVL----VPQLTKSF--HEARKVVCGQNCTFIINNNGVVLSCGEG 807

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYH-HSSAITVDGELYMWGKNSNGQ 154
             +G+LG   N   S     IS L+  +V+    STG   H+ A+T +GE++ WG    G+
Sbjct: 808  SYGRLG-QGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGK 866

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G    +    P ++E L G    Q A GF+ S  VT  GK+ ++G G  GRLGHG  
Sbjct: 867  LGHGNSDRQ--RRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS- 923

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-DENGRVYIFGDRAVDKMLFQ 273
                    +T++  P  +  LE   +   A G  H+  +  +N  V+  GD    K+   
Sbjct: 924  --------TTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIG 975

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +    P+ I  L     +++ CG   T  LT  G+L+ +G +       G+ +   SP
Sbjct: 976  GTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDR----MCGNCETRTSP 1031

Query: 332  ERVQGPFSESPVDQICTS-IVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 389
                  F+   V  + +  I+ +S G +HT A+ S+G + TWG             ++ G
Sbjct: 1032 S-----FNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWG------------SNTDG 1074

Query: 390  QLGHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
            QLG G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 1075 QLGLGHTNHVQEPTLVESLSGKNIR--QISAGRTHSAA 1110



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 141/359 (39%), Gaps = 65/359 (18%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLR----ISGLKKEVVQISTGYHHSSAITVDGEL 144
            T C ++    D     I  +   S +PL     + G+ +++V       +        ++
Sbjct: 693  TRCKFSQEFIDLFHEEIQLDSSISKDPLDNTQWVQGMDEQLVSWYEQCPNDWQCGTHCDV 752

Query: 145  YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG--------- 195
            Y++G   +GQL                E  SG+   Q    F ++  V  G         
Sbjct: 753  YLFGAGRHGQLA---------------EVGSGVLVPQLTKSFHEARKVVCGQNCTFIINN 797

Query: 196  -GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFL---H 249
             G VLS G G  GRLG G            S+ + RL  I  L+G  VK  A       H
Sbjct: 798  NGVVLSCGEGSYGRLGQGN-----------SDDSNRLTHISALQGFIVKQLATSTGSDGH 846

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
            +  + ENG V+ +GD    K+     +  RRP  I  L   E  +V CG  H+ V+T  G
Sbjct: 847  AIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDG 906

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
            +L+T+G  + G LG GS      PERV        + Q       V+CG  HT  +S+  
Sbjct: 907  KLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQ-------VACGLNHTVIVSQDN 958

Query: 368  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            +  W  G        DG    G+LG G       PT +     V   ++SCG   T AL
Sbjct: 959  LTVWACG--------DGDY--GKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAAL 1007


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4151 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4208

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4209 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4267

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4268 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGD---- 4321

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4322 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4371

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4372 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4429

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4430 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDAGEVYTW----------- 4467

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 4468 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4510



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3138 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P +++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3198 LGHGDN-ATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3256

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3257 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3312

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3313 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3363

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3364 NKKPALVIGLDAVFVNRVACGSSHS 3388



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 135/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4237 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4294

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4295 AHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4352

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4353 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4403

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4404 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4463

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 4464 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 4512

Query: 366  GKI 368
             ++
Sbjct: 4513 SQL 4515



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 179/404 (44%), Gaps = 64/404 (15%)

Query: 42   LWGNGDYGRLG-----------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TET 89
            +WG  D  +LG                SR RP+  S            GG+ +LF+ ++ 
Sbjct: 3031 VWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIS------------GGSKSLFIVSQD 3078

Query: 90   GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
            G V+A G    G+LG+       L P ++  L + VV+   + +G  H+ A+T+DG+++ 
Sbjct: 3079 GKVFACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3137

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            WG+  +G+LG G +    +  P  VE L     +  A G   S A++  G++ +WG G  
Sbjct: 3138 WGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEY 3195

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
            GRLGHG  +         ++  P+ +  L G +V   A G     +  + E+G V+ +GD
Sbjct: 3196 GRLGHGDNA---------TQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3246

Query: 265  RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
                K+       +  P  I +L      ++ CG   +  LT  GE++TWG  +   LG 
Sbjct: 3247 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3306

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            G    +  P+ + G             ++ V+ G  H  A+++ G++  WG         
Sbjct: 3307 GGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVTDAGQVYAWG--------- 3349

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3350 DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4257 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR 4316

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4317 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4374

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4375 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4431

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G VY +GD    ++        +
Sbjct: 4432 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4484

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4485 RPRLVAALQGKHIVKVTCGSAHTLALST 4512



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 141/323 (43%), Gaps = 53/323 (16%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           +  +K +AC  +  L L++ G +Y        +LG  E     LEP  I  L +E +   
Sbjct: 570 RFQVKQIACSESLLLLLSQDGKLYNC------RLGKPE-----LEPQPIEELAQETILSI 618

Query: 130 TGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQA 182
            G+    H  AI  +   Y WG   + +LG G   A+ +P  TK+     C+  +F    
Sbjct: 619 AGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP--TKISALDRCVKAVFC--- 673

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
             G   S A+T  G + +WG G  GRLGHG          S  +  P ++  L   ++  
Sbjct: 674 --GCSYSAAITWSGNLYTWGRGTYGRLGHGN---------SDDQCVPAIVMALAEYEIID 722

Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            A  +G  HS C+   G VY +GD    K+     N + +P L+  LP  + +  G   +
Sbjct: 723 VALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQRIFAGAQSS 782

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSC 355
             LT+ G LY+WG  +  CLG   ++       VQG      V ++ +S     +V V+ 
Sbjct: 783 MALTTEGHLYSWG--KASCLGHQQVE-----RSVQG----CSVPRLVSSLQHKRLVDVAV 831

Query: 356 GWKHTAAISE-GKILTWGWGGSH 377
           G  H  A++  G++  WG   S 
Sbjct: 832 GVAHCLALTSCGEVFGWGRNDSQ 854



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + +  P +  A  ++ +   AL  G AH+L LT  G VYA G  D+
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N   SL+P+ +  L + V +I  G   S A+T +G LY WGK S       ++
Sbjct: 750 GKLG-NGNCNSSLQPILVETLPR-VQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVER 807

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           + +   +P  V  L        A+G    +A+T  G+V  WG   S ++
Sbjct: 808 SVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 38  RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           R A  WG G+  RLG G   +R  P   SA ++  +KA+ CG +++  +T +G +Y  G 
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDR-CVKAVFCGCSYSAAITWSGNLYTWGR 692

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
             +G+LG   +    +  + ++  + E++ ++  +G  HS  +T +G +Y WG    G+L
Sbjct: 693 GTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKL 752

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
           G G   + + PI   VE L  +  ++   G + S+A+T  G + SWG      LGH Q E
Sbjct: 753 GNGNCNSSLQPI--LVETLPRV--QRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVE 806

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            S+ G         PRL+  L+  ++   A G  H   +   G V+ +G
Sbjct: 807 RSVQGC------SVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 22/274 (8%)

Query: 50  RLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           RLG   LE    P       + ++ ++A  C G H L +      Y+ G  +  +LG  +
Sbjct: 596 RLGKPELE----PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651

Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
               ++ P +IS L + V  +  G  +S+AIT  G LY WG+ + G+LG G    + +P 
Sbjct: 652 THARAV-PTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPA 710

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
                    I       G   S+ +T  G V +WG G  G+LG+G  +S L  +    E 
Sbjct: 711 IVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPI--LVET 768

Query: 228 TPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            PR+ +   G +  +A    G L+S      G+    G + V++ +         P L+S
Sbjct: 769 LPRVQRIFAGAQSSMALTTEGHLYSW-----GKASCLGHQQVERSV----QGCSVPRLVS 819

Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            L +    +V  G  H   LTS GE++ WG N++
Sbjct: 820 SLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDS 853



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 126/290 (43%), Gaps = 38/290 (13%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT  + +S +     + G +    V+  GKV + G 
Sbjct: 3029 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGE 3086

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3087 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3137

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P L+  L   +  +V CG  H+  ++S GELYTWG  E G 
Sbjct: 3138 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISE-GKILTWGWGGS 376
            LG G       P++V               ++ V+CG +   T A++E G + +WG    
Sbjct: 3198 LGHGDNATQLKPKQVTALAGR--------RVIQVACGSRDAQTLALTEDGAVFSWG---- 3245

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G F        G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3246 DGDF--------GKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLAL 3287



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 22/126 (17%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   + S    Y+WG+ E+  LG G       P ++      S +D+ C   V   
Sbjct: 622 CEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKI------SALDR-CVKAVF-- 672

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  ++AAI+  G + TWG     GT+        G+LGHGN  D   P IV      + 
Sbjct: 673 CGCSYSAAITWSGNLYTWG----RGTY--------GRLGHGNSDDQCVPAIVMALAEYEI 720

Query: 414 LQVSCG 419
           + V+ G
Sbjct: 721 IDVALG 726


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 185/416 (44%), Gaps = 66/416 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +    V  A E +S++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P R+  L   ++ Q + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             +G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  ++E+GR+  +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG+G  D      
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMV 292

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V     E         I+ VSCG  H+ A++ +G+I ++G  G H           G
Sbjct: 293 PQKVNLLAEE--------DIIQVSCGGTHSVALTRDGRIFSFG-RGDH-----------G 332

Query: 390 QLGHGNDVD---------YIHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 429
           +LG+G  V           I P   +F    +       A  ++CG  HT A++E+
Sbjct: 333 RLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEW 388



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 109/285 (38%), Gaps = 80/285 (28%)

Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
           +++WG+G  G+LG G                                            +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 215 SSILGFLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
              LG    T +E  P  +K L  VK+  AA G  H   +D+ GR Y +G         +
Sbjct: 67  RGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  + G   RR  +I K    +    +V  GG H+ VLT  G ++TWG         G 
Sbjct: 127 PLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 182

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 383
           I  +  P RVQG            ++ L++ G  H  A+ E G++L W            
Sbjct: 183 IKQISVPVRVQG----------LENVRLIAVGAFHNLALEEDGRLLAW------------ 220

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G++  GQLG G+     HP  V   +++  + ++ G  H+ AL +
Sbjct: 221 GNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTD 265


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score =  124 bits (310), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 84/276 (30%), Positives = 128/276 (46%), Gaps = 44/276 (15%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLN---------------------DFGQLGISEN 108
           K  +K ++CG  HTL +T+ G ++  G+                        GQLG +EN
Sbjct: 267 KDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLG-NEN 325

Query: 109 IGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
                EP  +    K++ +Q++ G  HS A+T +G+++ WGKN+ GQLG G +  ++ P 
Sbjct: 326 FVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPT 385

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
              +E    +       G + S  ++   ++ +WG G   RLGHG          +T E 
Sbjct: 386 MIIIE----VMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGV---------TTDEL 432

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            P+ +  LE V V   + G  H+  I   G VY +GD    K+  QE N +        L
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKS--------L 484

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                V  GG H+  LT  G LY+WGS++ G LGIG
Sbjct: 485 HLPTRVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 27/217 (12%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG  +  + + P     + K     +ACG +H++ LT+ G ++  G N  GQLG    
Sbjct: 319 GQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLG---- 374

Query: 109 IGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            G+  + L+ + +  EV+   I +G  HS+ I+ + ELY WG     +LG G    ++  
Sbjct: 375 QGHRNDQLKPTMIIIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDEL-- 432

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
            P KV  L  ++    + G   ++A+T  G V +WG G SG+LG  QE+       + S 
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN-------NKSL 484

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           + P  +           +AG LHS  + + G +Y +G
Sbjct: 485 HLPTRV-----------SAGGLHSMALTDQGILYSWG 510



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNG Y RLG G       P      E   +  ++CG  HTL +T  G VYA G    G+
Sbjct: 415 WGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGK 474

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--KK 160
           LG+ EN      P R+S           G  HS A+T  G LY WG +  G LG+G  + 
Sbjct: 475 LGVQENNKSLHLPTRVSA----------GGLHSMALTDQGILYSWGSSKGGVLGIGFQRD 524

Query: 161 AAKVIPIPTKVECLSGIFTK 180
                 +P K+  ++ I +K
Sbjct: 525 NKDCYSLPQKIRTVAKIQSK 544



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 74/291 (25%), Positives = 108/291 (37%), Gaps = 83/291 (28%)

Query: 195 GGKVLSWGAGGSGRLGHGQES-----------------------------------SILG 219
           G K++ WG   SGRLG  +E+                                   +   
Sbjct: 192 GQKLIVWGISDSGRLGLRKETLEIKQKNKVRRRGQKQQENTSESEQEDDDQFQKNENAQS 251

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF------- 272
           F+RS    T   I E     +K  + G  H+  I + G ++ FG     K+         
Sbjct: 252 FVRSYVNKTE--INEEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLL 309

Query: 273 ----------QEGN----HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
                     Q GN    +   P+ +   P  +  +V CG  H+  LT  G+++TWG N 
Sbjct: 310 LQNKSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNT 369

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGG 375
            G LG G  +    P  +     E     IC+       G +H+A IS E ++ TWG G 
Sbjct: 370 RGQLGQGHRNDQLKPTMI---IIEVMATSICS-------GDQHSAFISDEKELYTWGNGQ 419

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                         +LGHG   D ++P  V   E+V    VSCG  HT A+
Sbjct: 420 YF------------RLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAI 458



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 25/202 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G    + +P +     +    ++  G  H+ F+++   +Y  G   + +
Sbjct: 365 WGKNTRGQLGQGHRNDQLKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFR 422

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG        L P ++  L+   V  +S G  H+ AIT +G +Y WG   +G+LG+ ++ 
Sbjct: 423 LGHGVTTD-ELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN 480

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K + +PT+V           + G   S+A+T  G + SWG+   G LG       +GF 
Sbjct: 481 NKSLHLPTRV-----------SAGGLHSMALTDQGILYSWGSSKGGVLG-------IGFQ 522

Query: 222 RSTSE-YT-PRLIKELEGVKVK 241
           R   + Y+ P+ I+ +  ++ K
Sbjct: 523 RDNKDCYSLPQKIRTVAKIQSK 544



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 89/377 (23%), Positives = 153/377 (40%), Gaps = 77/377 (20%)

Query: 70   KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQI 128
            K+ +  ++C   H + ++  G  Y+ G N + QLG+     Y+  P +I G L+ + + +
Sbjct: 788  KNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIM 847

Query: 129  STGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
            ST     SA+  D GE++ +G + +G LG  +K   V+  P  +  +  +     A G +
Sbjct: 848  STCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIF--LASGPQ 905

Query: 188  QSVAVTGGGK-VLSWGAGGSGRLG---------HGQESSILGFLRSTSE----------- 226
              +A+T   + + +WG    G+LG           Q    +    S  E           
Sbjct: 906  GMMAITEQKRQIYAWGNNLYGQLGIQITNNNMNMNQFGPDIDIDDSQDEIKQKEKKIDLD 965

Query: 227  ------------YTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFGDRAVDKM-- 270
                        Y P+ +K     K++I     G  HS  ID+ G +Y  G R    +  
Sbjct: 966  EQNKKITKNQIIYKPQKVKIENDRKIQIRQIGMGMFHSVAIDDLGHLYSCGLRKFSGLAE 1025

Query: 271  -LFQEGNHARRPSLI-----SKLPYS-EEVVCGGYHTCVLTSG--GE----LYTWG--SN 315
             L +EG      + I       L +  ++V    YHT  LT    GE    ++ WG  + 
Sbjct: 1026 SLSKEGLSGFDDTFIYLKKDHMLNHQFQQVSVSEYHTLALTQDQTGEFNNVVFGWGLCNL 1085

Query: 316  ENGCLG---------------IGSIDVLHSP--ERVQGPFSESPVDQI--CTSIVLVSCG 356
             N CL                +   D L+ P  E    P + + +++   C +IV +S G
Sbjct: 1086 GNLCLKDQKEIQQAMKDMKYQMKDFD-LNEPLKEMFTLPINLTQINKFKDCDNIVYISAG 1144

Query: 357  WKHTAAISE-GKILTWG 372
              H  A+++ GK+ +WG
Sbjct: 1145 LMHNLAMNKNGKVFSWG 1161



 Score = 48.9 bits (115), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 14/166 (8%)

Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
           P  I   K +++ +S  Y H+ AI+  G  Y WG N   QLGLG    K   IP K++  
Sbjct: 781 PFLIPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLG-YMCKYNHIPQKIQ-- 837

Query: 175 SGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             + TK+  +       S  +T  G++ ++G   SG LGH +++  +      SE  P++
Sbjct: 838 GALETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYV-----VSE--PKM 890

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           I ++  + + +A+      A  ++  ++Y +G+    ++  Q  N+
Sbjct: 891 INDIPPM-IFLASGPQGMMAITEQKRQIYAWGNNLYGQLGIQITNN 935



 Score = 45.4 bits (106), Expect = 0.052,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 7/120 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+  Y +LGLG +  ++  +   +  A E   +    C    +  LT+ G ++  G +D
Sbjct: 813 WGSNKYYQLGLGYM-CKYNHIPQKIQGALETKRIIMSTCSDRFSALLTDKGEIWTFGTSD 871

Query: 100 FGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
            G LG  E   Y + EP  I+ +   ++ +++G     AIT    ++Y WG N  GQLG+
Sbjct: 872 SGVLGHDEKNYYVVSEPKMINDIPP-MIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGI 930



 Score = 40.4 bits (93), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 27/128 (21%)

Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSES 341
           +PY +  +    C   H   ++  G  Y+WGSN+   LG+G +    H P+++QG     
Sbjct: 784 IPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETK 843

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                   I++ +C  + +A +++ G+I T+            G S  G LGH     Y+
Sbjct: 844 -------RIIMSTCSDRFSALLTDKGEIWTF------------GTSDSGVLGHDEKNYYV 884

Query: 401 --HPTIVN 406
              P ++N
Sbjct: 885 VSEPKMIN 892



 Score = 39.7 bits (91), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 344 DQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTF---------SEDGHSSGGQLGH 393
           ++I   I  VSCG  HT  I+ +G I  +G G     F                 GQLG+
Sbjct: 264 EEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGN 323

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            N V+   PT +      K +QV+CG +H+ AL +
Sbjct: 324 ENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTD 358


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 155/347 (44%), Gaps = 54/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 328 WGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNF 387

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 388 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 446

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 447 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 504

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 505 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS-- 553

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 554 --PVYGQLGN----PQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 607

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG G  D  + P  V     E+  D+   SI   +CG   TAAI
Sbjct: 608 NGRLGHGDTDDRNFPSLV-----EALKDKQVKSI---ACGTNFTAAI 646



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNINIELVA 362

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 363 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 420

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 421 WHTAVVTSSGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACG 471

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 472 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNF 529

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V++I    
Sbjct: 530 CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGRLSKSFVEEI---- 584

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S+ ++ TWG G +            G+LGHG+  D   P++V   +
Sbjct: 585 ---ACGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRNFPSLVEALK 629

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   ++CG N T A+
Sbjct: 630 DKQVKSIACGTNFTAAI 646



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 141/324 (43%), Gaps = 62/324 (19%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQL----------GLGKKAAKVIPIPTKVECLSGIFTK 180
           G+  S A+   G++++WG+ +   +          G G K   ++P    +E    +  +
Sbjct: 253 GHDDSDAL---GDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLP--KALESTVVLDVQ 307

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             A G   +  VT  G+V SWG    GRLGHG +S +L          P+LI  L  + +
Sbjct: 308 NIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDSLSNINI 358

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVC 295
           ++ A G  H+  +  +G +Y +GD   +  L   GN      P  ++   +  +   + C
Sbjct: 359 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 418

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           G +HT V+TS G+L+T+G    G LG G    +  P  V+       +  + T  V  +C
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVES------LKGLRT--VRAAC 470

Query: 356 GWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           G  HTAA+ E             GK+ TWG G              G+LGHG+    + P
Sbjct: 471 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGDKEAKLVP 518

Query: 403 TIVNFGENVKALQVSCGFNHTGAL 426
           T V         QV+CG + T AL
Sbjct: 519 TCVAALVEPNFCQVACGHSLTVAL 542



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++     +    P LI  L 
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 355 NINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 413

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G     GTF        G LGHG+      P
Sbjct: 414 SSI-------SCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDRKSVSIP 454

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 455 REVESLKGLRTVRAACGVWHTAAVVEVM 482


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 172/384 (44%), Gaps = 41/384 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +YG+LG GS  +R  P+    +   S+ A+  G  H+L L   G V++ G N  GQ
Sbjct: 71  WGGNNYGQLGTGS--TRQNPMPARVWRLFSITAIGAGELHSLALKSDGTVWSWGANTNGQ 128

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S+ P  + GL   VV I+ G+ HS  +  DG ++ WG N+ GQLG G    
Sbjct: 129 LGDGTLISRSV-PAPVPGLTN-VVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTR 186

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+G+  K  A G   S+A+T  G++ +WG    G+LG G    ++G  R
Sbjct: 187 RLTPV--QVLGLTGV--KDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGD---LVG--R 237

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST+   P +        V   + G  HS  +  +G V+ +G     ++          P+
Sbjct: 238 STAAALPGM------TGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPT 291

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  GG H+  L   G ++ WGSN    LG G+     SP +V G      
Sbjct: 292 QVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTG------ 345

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                T +  V+ G    +   +G    W W          G +S GQ+G G  +  + P
Sbjct: 346 ----LTQVKGVAAGGGLHSVAVKGNGEVWAW----------GSNSEGQVGDGTYLMKLVP 391

Query: 403 TIVNFGENVKALQVSCGFNHTGAL 426
           T       V+   VS G  HT AL
Sbjct: 392 TTARV--LVERADVSAGGGHTLAL 413



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L L   G V++ G N++GQLG        + P R+  L   +  I  G  HS A+  D
Sbjct: 58  HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPM-PARVWRLF-SITAIGAGELHSLALKSD 115

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G ++ WG N+NGQLG G   ++ +P P  V  L+ +    A  GF  S+ +   G V +W
Sbjct: 116 GTVWSWGANTNGQLGDGTLISRSVPAP--VPGLTNVVAIAA--GFSHSMVLKADGTVWAW 171

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   +G+LG G           T   TP  +  L G  VK  AAG +HS  +  +GR++ 
Sbjct: 172 GLNAAGQLGDGTP---------TRRLTPVQVLGLTG--VKDIAAGNVHSLALTADGRLWT 220

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENG 318
           +G   VD  L   G+   R S  + LP    VV    GG H+ +L   G +++WG N+ G
Sbjct: 221 WGGN-VDGQL-GTGDLVGR-STAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAG 277

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
            LG+GS+    +P +V G           T +V V+ G +H+ A+  +G +  W      
Sbjct: 278 QLGLGSVVSTPTPTQVPG----------LTEMVAVTGGGQHSVALRVDGTVWAW------ 321

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
                 G ++  QLG G     + P  V     VK +    G +
Sbjct: 322 ------GSNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLH 359



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 28/331 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LGLGS+ S   P       +  + A+  GG H++ L   G V+A G N   Q
Sbjct: 271 WGKNDAGQLGLGSVVSTPTPTQVPGLTE--MVAVTGGGQHSVALRVDGTVWAWGSNARAQ 328

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P +++GL +     + G  HS A+  +GE++ WG NS GQ+G G    
Sbjct: 329 LGDGTQT-QRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLM 387

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K++P   +V     +     + G   ++A+   G    WG     +LG G          
Sbjct: 388 KLVPTTARVL----VERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDG---------- 433

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+   P  ++ L   +V   +AG  HS  + E+G V+ +G      +      +  +P 
Sbjct: 434 -TTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPV 492

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S    +  V  G +H+  L+  G ++ WG N  G LG G++    +P R   PF    
Sbjct: 493 KVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTV----TPTR-NAPFRVPN 547

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
           ++     +V ++ G +H+ A+ ++G +  WG
Sbjct: 548 LE----GVVSLAAGGEHSLALKADGTVWVWG 574



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 159/374 (42%), Gaps = 39/374 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G++G G+   +  P       + +   ++ GG HTL L   G  +  GLN   Q
Sbjct: 372 WGSNSEGQVGDGTYLMKLVPTTARVLVERA--DVSAGGGHTLALKPDGTAWGWGLNAQSQ 429

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++  L + V  +S G +HS A+  DG ++ WG N  G +G G    
Sbjct: 430 LGDGTTTARPL-PVQVLNLTR-VAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALN 487

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P    V+    +     A G   S+A++  G V +WG    G+LG G  +       
Sbjct: 488 RSQP----VKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTP------ 537

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             +   P  +  LEGV V +AA G  HS  +  +G V+++G +         G   R P 
Sbjct: 538 --TRNAPFRVPNLEGV-VSLAAGGE-HSLALKADGTVWVWGRQDTCADPENVGRVLRVPE 593

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L  +  V  G  H+ VL + G L+ WG N  G L  G+     +P RV G      
Sbjct: 594 QVQGLTDAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPARVDG------ 647

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                T ++  S G + T A+ +     W W          G ++ GQLG G  V    P
Sbjct: 648 ----LTGVISFSVGSEQTLAL-KADGTAWAW----------GPNAQGQLGGGLSVPRTRP 692

Query: 403 TIVNFGENVKALQV 416
           T V    +V+ + +
Sbjct: 693 TQVPTLTDVRTVAM 706



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 161/360 (44%), Gaps = 45/360 (12%)

Query: 49   GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
            G+LG G+L  R  PV      +   +A+A G  H L L   G V + G N  G+LG    
Sbjct: 778  GQLGDGTLFPRAEPVPVIGLSE--CRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTT 835

Query: 109  IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            +        + G    V+ I+ G  HS A+  DG +  WG N  GQLG G   ++V+P+ 
Sbjct: 836  VARRAPA--VVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPV- 892

Query: 169  TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             +V+ L+G+    A  GF  S+A+   G V +WG    G+LG          LRS     
Sbjct: 893  -RVQGLTGVAAIAAGDGF--SLALKHDGTVWAWGGNTLGQLGDNTT------LRS---LV 940

Query: 229  PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
            P   + L GV     AAG  HS  +  +G ++ +G     ++   +G  AR+  P  ++ 
Sbjct: 941  PVRTQALTGVTA--VAAGRNHSLALKGDGTLWAWGSNTYGEL--GDGTQARKLAPVQVTS 996

Query: 287  LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            L     +  G +H+  +TSGG+++ WG N+ G +G G        P +V G         
Sbjct: 997  LTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQVPG--------- 1047

Query: 346  ICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
              TS V V+ G +H+ A+   + + W W          GH   GQLG G     + P  V
Sbjct: 1048 -LTSAVAVAGGGEHSLALLSDRSV-WAW----------GHGDMGQLGTGMSNLRLSPVQV 1095



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G LG G+  +R  P V        + ++A G  H+L L   G V A G N  GQ
Sbjct: 822  WGANAEGELGDGTTVARRAPAVVGPLA--GVLSIAVGARHSLALLGDGSVQAWGSNIQGQ 879

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG    +   L P+R+ GL   V  I+ G   S A+  DG ++ WG N+ GQLG      
Sbjct: 880  LGDGTTVSRVL-PVRVQGLTG-VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLR 937

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             ++P+  + + L+G+     A G   S+A+ G G + +WG+   G LG G ++  L    
Sbjct: 938  SLVPV--RTQALTGV--TAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKL---- 989

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRP 281
                  P  +  L GV      AG  HS  +   G+V+ +G     ++    + N    P
Sbjct: 990  -----APVQVTSLTGVSAL--DAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLP 1042

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            + +  L  +  V  GG H+  L S   ++ WG  + G LG G  ++  SP +V
Sbjct: 1043 AQVPGLTSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNLRLSPVQV 1095



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 22/293 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G +G G+  +R +PV  S     +L A+  A G  H+L L+  G V+A G N  
Sbjct: 472 WGANYWGAIGDGTALNRSQPVKVSG----TLVAMTVASGNFHSLALSVDGSVWAWGDNSL 527

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG          P R+  L+  VV ++ G  HS A+  DG +++WG+         + 
Sbjct: 528 GQLGDGTVTPTRNAPFRVPNLEG-VVSLAAGGEHSLALKADGTVWVWGRQDT--CADPEN 584

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +V+ +P +V+ L+     +A  G   SV +   G + +WG    G+L  G        
Sbjct: 585 VGRVLRVPEQVQGLTDAVAVRA--GRCHSVVLRADGTLWAWGRNAEGQLADGT------- 635

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T   TP  +  L GV     + G   +  +  +G  + +G  A  ++         R
Sbjct: 636 --FTDRMTPARVDGLTGVISF--SVGSEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTR 691

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           P+ +  L     V  G  H  VL     L+ WGSN  G +G G++D   +P R
Sbjct: 692 PTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDWQAAPVR 744



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 157/386 (40%), Gaps = 47/386 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+L  G+   R  P          + + + G   TL L   G  +A G N  GQ
Sbjct: 623 WGRNAEGQLADGTFTDRMTPARVDGLT--GVISFSVGSEQTLALKADGTAWAWGPNAQGQ 680

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   ++  +  P ++  L  +V  ++ G  H+  +  D  L+ WG N+ GQ+G G    
Sbjct: 681 LGGGLSVPRT-RPTQVPTLT-DVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDW 738

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+ + +    G+     A   + S+ +   G V S GA  SG+LG G        L 
Sbjct: 739 QAAPVRSGLAASRGL-----AAATQYSLGIALDGSVQSTGANASGQLGDGT-------LF 786

Query: 223 STSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             +E  P + + E   +     A G  H   +  +GRV  +G  A  ++        R P
Sbjct: 787 PRAEPVPVIGLSECRAI-----AGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRAP 841

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +++  L     +  G  H+  L   G +  WGSN  G LG G+      P RVQG     
Sbjct: 842 AVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQG----- 896

Query: 342 PVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                 T +  ++ G   + A+  +G +  W WGG          ++ GQLG    +  +
Sbjct: 897 -----LTGVAAIAAGDGFSLALKHDGTV--WAWGG----------NTLGQLGDNTTLRSL 939

Query: 401 HPTIVNFGENVKALQVSCGFNHTGAL 426
            P        V A  V+ G NH+ AL
Sbjct: 940 VPVRTQALTGVTA--VAAGRNHSLAL 963


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4241 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4298

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+     +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4299 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4357

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4358 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4411

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI+++  V+ +GD    K+     
Sbjct: 4412 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKL----- 4461

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4462 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4519

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 4520 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDSGEVYTW----------- 4557

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 4558 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4600



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +        ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3206 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3265

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3266 LGHGDN-STQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3324

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3325 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3380

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3381 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3431

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3432 NKKPALVIGLDAVFVNRVACGSSHS 3456



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 134/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4327 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 4384

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4385 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 4442

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +     V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4443 CINDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4493

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4494 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4553

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 4554 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 4602

Query: 366  GKI 368
             ++
Sbjct: 4603 SQL 4605



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 166/356 (46%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+  + G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3135 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3193

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 3194 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  S         ++  P+L+  L G +V   A G     +  
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNS---------TQLKPKLVAALAGRRVIQVACGSRDAQTLA 3302

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3303 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3362

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 3363 TWGKGDYYRLGHGGDQHVRKPQPIAGLRGR--------RVIHVAVGALHCLAVTDAGQVY 3414

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3415 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       ++  +ACG AH+  +T +G V   G   +G+
Sbjct: 4347 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  I  D  ++ WG    G+LG G 
Sbjct: 4407 LGHGDSED-QLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG- 4464

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4465 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4521

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4522 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4574

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4575 RPRLVAALQGKHIVKVTCGSAHTLALST 4602



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + +  P V  A  +H +   AL  G AH+L LT  G VYA G  D+
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 754

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N+  S+ P+ +  L K V ++  G   S A+T DG+LY WGK S     L ++
Sbjct: 755 GKLG-NGNLNGSMSPVLVESLPK-VQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVER 812

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           +A+   +P  +  L        A+G    +A++  G+V  WG   S ++
Sbjct: 813 SAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQI 861



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 133/319 (41%), Gaps = 45/319 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           K  ++ + C  +  L L+E G +Y   +                EP  +  +  E + +S
Sbjct: 575 KFQVQQIVCSESIVLILSEDGKLYNWRM-----------FKPETEPQLLEEIAHETI-VS 622

Query: 130 TGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQ 181
              H    H  AI ++   Y WG   + +LG G   A+ +P  TK+     C+  +F   
Sbjct: 623 IASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVP--TKITLLDRCVKAVFC-- 678

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G   S A+T  G + +WG G   RLGHG          S  +  P ++  L   ++ 
Sbjct: 679 ---GCSYSAAITCSGNLYTWGRGTYARLGHGN---------SDDQPLPTVVMALTEHEII 726

Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
             A  +G  HS C+   G VY +GD    K+     N +  P L+  LP  + V  G   
Sbjct: 727 DVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQRVFAGAQF 786

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT+ G+LY+WG  +  CLG   ++   S +    P   S +      IV V+ G  H
Sbjct: 787 SMALTTDGQLYSWG--KASCLGHQLVE--RSAQWCSVPRLISGLQH--KRIVDVAVGVAH 840

Query: 360 TAAISE-GKILTWGWGGSH 377
             A+S  G++  WG   S 
Sbjct: 841 CLALSSCGEVFGWGRNDSQ 859



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 18/230 (7%)

Query: 38  RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           R A  WGNG+  RLG G   +R  P   +  ++  +KA+ CG +++  +T +G +Y  G 
Sbjct: 639 RNAYSWGNGEDHRLGHGDTHARAVPTKITLLDR-CVKAVFCGCSYSAAITCSGNLYTWGR 697

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
             + +LG   +    L  + ++  + E++ ++  +G  HS  +T +G +Y WG    G+L
Sbjct: 698 GTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKL 757

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G     + P+   VE L  +  ++   G + S+A+T  G++ SWG      LGH    
Sbjct: 758 GNGNLNGSMSPV--LVESLPKV--QRVFAGAQFSMALTTDGQLYSWGKASC--LGH---- 807

Query: 216 SILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                +  ++++   PRLI  L+  ++   A G  H   +   G V+ +G
Sbjct: 808 ---QLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWG 854



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 129/304 (42%), Gaps = 42/304 (13%)

Query: 134  HSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            H  A  +D +L     +WG N   QLG G K +KV  +PT  + +S +     A G +  
Sbjct: 3083 HGMAGALDQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSL 3140

Query: 190  VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
              V   GKV + G G +GRLG G   ++           P  +  L    VK  A  +G 
Sbjct: 3141 FIVGQNGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGG 3191

Query: 248  LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
             H+  +  +G+V+ +G+    K+         +P L+  L   +  +V CG  H+  ++S
Sbjct: 3192 KHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251

Query: 306  GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAI 363
             GELYTWG  E G LG G       P+ V               ++ V+CG +   T A+
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGR--------RVIQVACGSRDAQTLAL 3303

Query: 364  SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
            +E G + +WG     G F        G+LG G       P  +     +  +Q+ CG   
Sbjct: 3304 TEDGAVFSWG----DGDF--------GKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQF 3351

Query: 423  TGAL 426
            + AL
Sbjct: 3352 SLAL 3355



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 34/157 (21%)

Query: 253 IDENGRVY---IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           + E+G++Y   +F     +  L +E  H    S+ S         C G H   +      
Sbjct: 591 LSEDGKLYNWRMFKPE-TEPQLLEEIAHETIVSIASH--------CEGRHFMAIDINRNA 641

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           Y+WG+ E+  LG G       P ++      + +D+ C   V   CG  ++AAI+  G +
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKI------TLLDR-CVKAVF--CGCSYSAAITCSGNL 692

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            TWG     GT++        +LGHGN  D   PT+V
Sbjct: 693 YTWG----RGTYA--------RLGHGNSDDQPLPTVV 717


>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
            [Oxytricha trifallax]
          Length = 2049

 Score =  124 bits (310), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 120/459 (26%), Positives = 196/459 (42%), Gaps = 76/459 (16%)

Query: 15   KQDIKLGSKLGICKRWISSTLQRRFAAL---WGNGDYGRLGLGSLESRWR---------- 61
            K+++ LGS   I  + +    ++    +    G  + G+LGL  L    +          
Sbjct: 1562 KRNLHLGSYSQILGKEVGGINKQEMCGILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKV 1621

Query: 62   --PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
              P +  + +   ++ + CG +HT+ +  +G V+  G N  GQLG+ +N    L      
Sbjct: 1622 LYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNSPQIL------ 1675

Query: 120  GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
                     S GY HS AIT   ELY+WG  S G  G+G    +  P+       S I T
Sbjct: 1676 ---------SAGYEHSIAITKSNELYIWG--SGGLCGIGTLKQQNAPVKIDFFNKSKILT 1724

Query: 180  KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE----YTPRLIKEL 235
              A  G   +VAVT   +  SWG    G+LG  Q S+I+   +   +     TP+ I +L
Sbjct: 1725 --AVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQ-STIVKLCQGQGDEPQVLTPQRIPKL 1781

Query: 236  EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------LFQEGNHARRPSL 283
            EG+++   A G  HS  + ++G +Y +G     ++            L  E +    P  
Sbjct: 1782 EGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQE 1841

Query: 284  ISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG---------IGSIDVLHSPE 332
            I+ L + +  +++CG   T   T  G+LY  G N+ G LG         I S++ +   +
Sbjct: 1842 INGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGK 1901

Query: 333  RVQGPFSESPVDQIC---TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 388
              Q      P   IC    +I  ++CG  H+ A+S +G  + W W          G    
Sbjct: 1902 HNQTSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAW----------GMFKN 1951

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            GQLG G     ++P  V    + +  +++CG  H+ AL+
Sbjct: 1952 GQLGLGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVALI 1990


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 21/231 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G  ++   P    A EK      A GG H+L LTE   VYA G N FGQ
Sbjct: 76  WGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQ 135

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+   + YS  P  +S L++  V  I+ GY HS A+    +LY WG+N  GQLGLG   
Sbjct: 136 LGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYR 195

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV----TGGG-----KVLSWGAGGSGRLGHG 212
           +   P+P  +        +Q + G++ ++A      G G     KV +WG G  G+LGH 
Sbjct: 196 SS--PVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHD 253

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +           S   P++++ L    ++  AAG   SA IDE  ++Y +G
Sbjct: 254 E---------LYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 129/295 (43%), Gaps = 44/295 (14%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAAL 184
           V  + G  H+ A+T +G +Y WG  +NG LG G   ++++P       +  + +    A 
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPSITTIAC 59

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++AV   G + +WG    G+LGHG            +   PR ++ LE      AA
Sbjct: 60  GEFHTLAVGQDGTLWTWGRNQYGQLGHGD---------CKTHKLPRRVEALEKKICIKAA 110

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           AG  HS  + E  +VY FG     ++ L  +  ++  P ++S+L  S    + CG  H+ 
Sbjct: 111 AGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSM 170

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L    +LY+WG N+ G LG+G       PE +   F +S V QI       SCG+ H  
Sbjct: 171 ALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLT-MFKKSQVQQI-------SCGYDHNI 222

Query: 362 A-ISE---------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
           A +SE          K+ TWG G              GQLGH        P +V 
Sbjct: 223 AFVSEYAGPGVPPLEKVYTWGRG------------EEGQLGHDELYSRCVPKVVQ 265



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 52/339 (15%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGY 132
           ACG  HT+ LTE G VY+ G  + G LG     S+ +  +L+   I  +   +  I+ G 
Sbjct: 4   ACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMP-SITTIACGE 61

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+ A+  DG L+ WG+N  GQLG G    K   +P +VE L      +AA G + S+ +
Sbjct: 62  FHTLAVGQDGTLWTWGRNQYGQLGHGD--CKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHS 250
           T   KV ++G+   G+LG          L S  +Y+  P ++  L    V     G+ HS
Sbjct: 120 TEANKVYAFGSNVFGQLG----------LESKVKYSAAPDIVSRLRRSGVCHITCGYSHS 169

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSG-- 306
             + ++ ++Y +G     ++       +  P  ++    S  +++ CG  H     S   
Sbjct: 170 MALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYA 229

Query: 307 -------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
                   ++YTWG  E G LG   +     P+ VQ   +          I  V+ G   
Sbjct: 230 GPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLAR--------GIRAVAAGGFS 281

Query: 360 TAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
           +AAI E K L TWG             S  GQLGHG+D+
Sbjct: 282 SAAIDEAKQLYTWGC------------SREGQLGHGDDI 308



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 42/259 (16%)

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE---LEGV 238
           AA G   +VA+T  G+V SWG   +G LGHG          S S+  P+ +         
Sbjct: 3   AACGKLHTVALTEEGRVYSWGCA-NGALGHGN---------SKSQLLPKALDRPLIYSMP 52

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--- 295
            +   A G  H+  + ++G ++ +G     ++   +    + P  +  L   E+ +C   
Sbjct: 53  SITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEAL---EKKICIKA 109

Query: 296 --GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVL 352
             GG H+ VLT   ++Y +GSN  G LG+ S        +V+   +   V ++  S +  
Sbjct: 110 AAGGQHSLVLTEANKVYAFGSNVFGQLGLES--------KVKYSAAPDIVSRLRRSGVCH 161

Query: 353 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           ++CG+ H+ A+ + + L + WG           +  GQLG G+      P  +   +  +
Sbjct: 162 ITCGYSHSMALLKSEQL-YSWG----------RNDCGQLGLGHYRSSPVPEHLTMFKKSQ 210

Query: 413 ALQVSCGFNHTGALL-EYV 430
             Q+SCG++H  A + EY 
Sbjct: 211 VQQISCGYDHNIAFVSEYA 229



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG   L SR  P V        ++A+A GG  +  + E   +Y  G +  GQ
Sbjct: 242 WGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQ 301

Query: 103 LGISENI 109
           LG  ++I
Sbjct: 302 LGHGDDI 308


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 145/330 (43%), Gaps = 25/330 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3954 GYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V ++ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4014 KLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4073

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4074 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4125

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4126 ---SDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVR 4182

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4183 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHAL 4242

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAISEGK 367
              +         I  V+CG  HT A S  K
Sbjct: 4243 QGK--------KITRVACGSAHTLAWSTMK 4264



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 179/396 (45%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV+C +        L  GG  TLF +T  G VYATG    G
Sbjct: 3901 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3959

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3960 RLGIGGTDSVMMPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4017

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L G      A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4018 GNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4071

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  + TP+L++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4072 -----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4126

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4127 DGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRK 4186

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A S+ G++ TWG             +  G
Sbjct: 4187 VAALQG-----------KKIISIATGSLHCVACSDKGEVFTWG------------DNDEG 4223

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V+  +  K  +V+CG  HT A
Sbjct: 4224 QLGDGTTCALQRPRLVHALQGKKITRVACGSAHTLA 4259



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 163/347 (46%), Gaps = 44/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            VY  GLND  QLG  +     L     S  K + V I+ G      ++ +G+LY  G+ +
Sbjct: 2911 VYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2970

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG       P P  +  LS    K+ A+  G + ++A+T  G+V SWG G  G+L
Sbjct: 2971 NGRLGLGDDGNACEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKL 3028

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GHG  SS+           PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3029 GHGNCSSL---------DKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   + N   +P L+  L      +V CG     T  LT+ G +Y+WG  + G LG G  
Sbjct: 3080 LGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3139

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            D  ++P   +R+ G             +V + CG + + A+++ G++ TWG G       
Sbjct: 3140 DGCYTPLLVDRLNG-----------LGVVQIECGAQFSLALTKYGEVWTWGKGDYF---- 3184

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3185 --------RLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3223



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 152/326 (46%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2967 GEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDG 3026

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N     +P  I  LK K +  ++ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3027 KLG-HGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3085

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P    V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3086 NTQLKP--KLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3138

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP L+  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3139 ----SDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3194

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3195 RKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3254

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 3255 -LDDARVNR-------VSCGSSHSIA 3272



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 196/402 (48%), Gaps = 44/402 (10%)

Query: 34   TLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGC 91
            T Q     +WG  D  +LG G   S+ + PV   +  K     +A GG+ TLF+ ++ G 
Sbjct: 2905 TPQHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSESLSKLKPVHIA-GGSKTLFVVSQEGK 2962

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWG 148
            +YA G    G+LG+ ++ G + EP  I  L + V++   + +G  H+ A+T DG ++ WG
Sbjct: 2963 LYACGEGTNGRLGLGDD-GNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWG 3021

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            +  +G+LG G  ++  +  P  +E L     +  A G   S A+T  G++ +WG G  GR
Sbjct: 3022 EGEDGKLGHGNCSS--LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRA 266
            LGHG          + ++  P+L++ L G +V   A G     +  +  +G VY +GD  
Sbjct: 3080 LGHGD---------TNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGD 3130

Query: 267  VDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              K+     +    P L+ +L      ++ CG   +  LT  GE++TWG  +   LG G+
Sbjct: 3131 FGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3190

Query: 325  IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 383
               +  P  V+G   +         ++ V+ G  H  A+++ G++  WG         ++
Sbjct: 3191 DHHVRKPTLVEGLRGKK--------VIHVAVGALHCLAVTDTGQVYAWG---------DN 3233

Query: 384  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             H   GQ G+G+ +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3234 DH---GQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3272



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 153/344 (44%), Gaps = 38/344 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3954

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 3955 YGAVGRLGIG--GTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4012

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4013 GKLGHGNR---LSYDR------PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P L+  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4064 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4123

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            G  D    P +++              ++ V CG + + A++  G I TWG G  H    
Sbjct: 4124 GGSDGCKVPMKIESLAG--------LGVIKVECGSQFSVALTRSGSIYTWGKGDYH---- 4171

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                    +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4172 --------RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4207



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 149/350 (42%), Gaps = 47/350 (13%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           S TLQ   A  WG+  +G  G GS      P  C A  +  +K L C     + L+ +G 
Sbjct: 432 SQTLQEVLA--WGSVKFG--GTGS-----SPFYCDAIAELGIKQLCCTERALMILSTSGN 482

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY---HHSSAITVDGELYMWG 148
           VY        Q            P R+ G   + V +   +    H  A+T D  +Y WG
Sbjct: 483 VYMMYYGSETQY-----------PQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWG 531

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
               G+LG G +       P  +E L        A G   S A++  G++ +WG G  GR
Sbjct: 532 NGDGGRLGHGDRTW--YEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRA 266
           LGHG    ++          P L+  L G  +   A  +G   + C+  +G V+ +GD  
Sbjct: 590 LGHGNSDDVM---------VPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             K+     N ++ P ++ KL      +V CGG  +  LT+ GE+YTWG  E   LG G+
Sbjct: 641 YGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGN 700

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
            + +  P+ ++       V ++C        G  H  A++E + L +GWG
Sbjct: 701 EEHVRYPKAIEA-LKTKKVKELCV-------GSLHVLALTEDQ-LVYGWG 741



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 15/243 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G H L LTE   VY+ G  D G+LG  +   Y    L  S + K +  I+ G  +S+A++
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALS 574

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
            +GELY WG+ + G+LG G   +  + +PT V  L+G      A G    Q++ VT  G 
Sbjct: 575 SNGELYTWGRGNYGRLGHGN--SDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGI 632

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LG G               TP+++ +L  + V     G   SA +   G
Sbjct: 633 VFSWGDGDYGKLGRGG---------CNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 683

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      H R P  I  L     +E+  G  H   LT    +Y WG N
Sbjct: 684 EVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRN 743

Query: 316 ENG 318
           + G
Sbjct: 744 DYG 746



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 38/313 (12%)

Query: 124  EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            E+VQ                +Y+WG N   QLG G K +K I +P   E LS +     A
Sbjct: 2891 EIVQEQASSQRGVETPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSESLSKLKPVHIA 2948

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
             G +    V+  GK+ + G G +GRLG G + +            P+ I  L    +K  
Sbjct: 2949 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNAC---------EPKPIPFLSQYVIKKV 2999

Query: 244  A--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
            A  +G  H+  + ++GRV+ +G+    K+     +   +P LI  L      +V CG  H
Sbjct: 3000 AVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGH 3059

Query: 300  TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
            +  +TS GELYTWG  E G LG G  +    P+ VQ    +         ++ V+CG + 
Sbjct: 3060 SAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQ--------RVIQVACGSRD 3111

Query: 360  T---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
                A  ++G + +WG     G F        G+LG G       P +V+    +  +Q+
Sbjct: 3112 AQTMALTADGSVYSWG----DGDF--------GKLGRGGSDGCYTPLLVDRLNGLGVVQI 3159

Query: 417  SCGFNHTGALLEY 429
             CG   + AL +Y
Sbjct: 3160 ECGAQFSLALTKY 3172



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 109/248 (43%), Gaps = 15/248 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G       P +  +    ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 530 WGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589

Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N    + P  +S L   +   V   +G   +  +T  G ++ WG    G+LG G 
Sbjct: 590 LG-HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG- 647

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V+ L  I   +   G + S A+T  G+V +WG G + RLGHG E  +  
Sbjct: 648 -GCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV-- 704

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+ I+ L+  KVK    G LH   + E+  VY +G     ++    G    
Sbjct: 705 -------RYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVS 757

Query: 280 RPSLISKL 287
            P+L   L
Sbjct: 758 EPTLCPTL 765



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG           T    P+LI+ L    +   A G  +
Sbjct: 519 LALTEDSSVYSWGNGDGGRLGHGDR---------TWYEEPKLIESLVDKNITFIACGSTY 569

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     +    P+L+S L       V CG     T  +T+
Sbjct: 570 SAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTA 629

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G +++WG  + G LG G  +   +P+ V              ++  V CG + +AA++ 
Sbjct: 630 SGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLD--------INVAKVYCGGQFSAALTA 681

Query: 366 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G ++            +LGHGN+    +P  +   +  K  ++  G  H  
Sbjct: 682 YGEVYTWGKGEAY------------RLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVL 729

Query: 425 ALLE 428
           AL E
Sbjct: 730 ALTE 733



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 21/176 (11%)

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYT 311
            D +G +Y +G     ++   EG   + P L   L     V + GG  T   +T+ G++Y 
Sbjct: 3893 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3952

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILT 370
             G    G LGIG  D +  P  ++       +  +    V V+ G KH  A+S EG + +
Sbjct: 3953 TGYGAVGRLGIGGTDSVMMPTLLES------IQHVFVKKVAVNSGGKHCLALSSEGHVYS 4006

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            WG G              G+LGHGN + Y  P ++      + + V+CG +H+ A+
Sbjct: 4007 WGEGDD------------GKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAI 4050


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 173/371 (46%), Gaps = 39/371 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +   ++ +ACG  +T+ +T+ G +Y+ G ND+
Sbjct: 31  WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  + + G +H+ AI   G+L+ WG N+ GQLGL  
Sbjct: 91  GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K   +   P  V+ L      Q A G + + A+T  G++ SWG+   G+LG G ++    
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKY-- 204

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+ I    G+ +   A G  HS  I ++G V+ +G     ++   +     
Sbjct: 205 ------EIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG GS      P +V   
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQV--- 315

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + +++  +SCG +HT A+  S G++  WG GG+            GQLG+ +
Sbjct: 316 -----MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNHS 358

Query: 396 DVDYIHPTIVN 406
                 P +V+
Sbjct: 359 TRSVTTPQVVH 369



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 18/299 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K  ACG  HTL + E G +++ G N  GQL
Sbjct: 86  GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    VVQI+ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTK 203

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P  +    GI     A G   S+A++  G V  WG    G+LG          L 
Sbjct: 204 YEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLG----------LN 252

Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            T +   P  ++ L+  K+  AA G   S  +  +G V+  G     ++     ++   P
Sbjct: 253 DTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILP 312

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S   + +P+ V GP
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 172/375 (45%), Gaps = 58/375 (15%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            PV+   +  H  K + C G+     T  G +   G+ D       ENI   L P  +  
Sbjct: 13  EPVIAVEYPLHKKKDMFCWGS-----TIHGELGLGGIED-------ENI---LIPRELDF 57

Query: 121 LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGI 177
            K  E+ QI+ G +++  IT  GE+Y  G N  GQLG   G+K  ++IP       L   
Sbjct: 58  KKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP------GLDAF 111

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             K+AA G   ++A+   G++ SWG+   G+LG   ++ +        E +PR++K L  
Sbjct: 112 VFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFM--------ESSPRMVKTLGT 163

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK---LPYSEEV 293
             V   A G  H+  +  NG +Y +G  +  ++ L  +  +  +P  IS    +P +  +
Sbjct: 164 SVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAF-I 222

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CGGYH+  ++  G ++ WG N  G LG+      + P ++Q   +     +IC +    
Sbjct: 223 ACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNA----KICYA---- 274

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG + +  ++ +G + T G G              GQLGHG++ + I P  V       
Sbjct: 275 ACGEEFSVFLTVDGGVFTCGAGMY------------GQLGHGSNSNEILPRQVMELMGST 322

Query: 413 ALQVSCGFNHTGALL 427
             Q+SCG  HT AL+
Sbjct: 323 VTQISCGKRHTLALV 337


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 176/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V++I       
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI------- 591

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  ++P  V     E+  D+   S+V   CG   TAAI
Sbjct: 623 TDDKNTPTLV-----EALKDKQVRSVV---CGINFTAAI 653



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVES----- 466

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 467 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 511

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+      PT V         QV+CG   T AL
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 421 SSI-------SCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVP 461

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 462 REVESLKGLRTVRAACGVWHTAAVVEVM 489


>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 447

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 151/319 (47%), Gaps = 21/319 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG LG G+ E+   PV  +      +KA++ G   +L L   G V+A G N +GQ
Sbjct: 94  WGSNSYGELGDGTNENSIEPVQVAGLT--GVKAISAGKGFSLALKGDGSVWAWGSNTYGQ 151

Query: 103 LGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG +  +   SL P+++ GL+  VV IS G  H  A+  +G L+ WG+NS+G LG G   
Sbjct: 152 LGKNPLSFMGSLTPIQVEGLEG-VVSISCGGSHCFALQENGVLWAWGENSHGILGDGTNE 210

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG----QESSI 217
           ++  P+  K++ +      +       ++AV   G V +WG    G+LG G     +   
Sbjct: 211 SQFKPVKPKIKDVKAFDAGE----LSHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGR 266

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
           +   R    Y P +++ +     K  AAG  HS  +  +G V+ +G  +  ++      G
Sbjct: 267 ISLGREADNYNPDIVRGVS--DAKAVAAGGSHSVALASDGSVWAWGSNSDGQLGLGHAGG 324

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
           +    P+ +  +     +  G YHT  L   G ++ WGSN +G LG  S     SP  + 
Sbjct: 325 SDVTSPTRVQGIEGVTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASSPVPIL 384

Query: 335 ---QGPFSESPVDQICTSI 350
              Q P + SP   I T+I
Sbjct: 385 IGPQIPTAASPT-SITTTI 402



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 129/312 (41%), Gaps = 43/312 (13%)

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           L  + V I+     S A+  DG ++ WG+  +G              P +V+ +SG+  +
Sbjct: 26  LSPQAVAIAASNCTSVALLEDGSVWQWGRVCDG---------VEWSAPQRVD-ISGV--R 73

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVK 239
           Q A G    +A+ G G V +WG+   G LG G  E+SI           P  +  L GVK
Sbjct: 74  QIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSI----------EPVQVAGLTGVK 123

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGG 297
              A  GF  S  +  +G V+ +G     ++     +   +  P  +  L     + CGG
Sbjct: 124 AISAGKGF--SLALKGDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGG 181

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            H   L   G L+ WG N +G LG G+ +    P +           +I       +   
Sbjct: 182 SHCFALQENGVLWAWGENSHGILGDGTNESQFKPVK----------PKIKDVKAFDAGEL 231

Query: 358 KHTAAISE-GKILTWGWG--GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            H  A+ E G +  WG+   G  GT      S  G++  G + D  +P IV    + KA 
Sbjct: 232 SHALAVKEDGSVWAWGFNYKGQLGTGGVS-LSDQGRISLGREADNYNPDIVRGVSDAKA- 289

Query: 415 QVSCGFNHTGAL 426
            V+ G +H+ AL
Sbjct: 290 -VAAGGSHSVAL 300


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 163/348 (46%), Gaps = 39/348 (11%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LG+G +E           W+P          L+ +ACG  HTLFLT  G VY
Sbjct: 6   WGNASHGQLGMGGIEDEQILIPSQIPWKP-------DAPLRQIACGHRHTLFLTANGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND  QLG   N+  +  PL I  L+   VV I+ G  HS A+T  G++  WG N  
Sbjct: 59  ACGNNDQAQLG--HNLP-TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG     + +I +P  +  L      Q A G   S+A+T  G++ SWG+   G+LG  
Sbjct: 116 GQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVK 174

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
               +     S   Y  RL   L G+ +   A G  HS  I ++  V+ FG     ++  
Sbjct: 175 PPQEL-----SHCNYPLRLTT-LLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            + ++   P+ +  L       V CG   +  LT+ G ++T G+   G LG GS      
Sbjct: 229 NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML 288

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGS 376
           P  V        ++ + ++I  V+CG +HT A+  S G++  +G G S
Sbjct: 289 PRMV--------MELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 143/306 (46%), Gaps = 17/306 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D  +LG  +L ++ RP++    + + + A+ACG  H++ LTE G V + G ND GQL
Sbjct: 61  GNNDQAQLG-HNLPTK-RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
           G S +      P  I  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   + 
Sbjct: 119 GQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQE 178

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++    V  +G    G+LG   ES      
Sbjct: 179 LSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDES------ 232

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +   P  +K L  + V+  A G   S  +   G V+  G     ++      +   P
Sbjct: 233 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLP 289

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  S + +  P+ V GP+
Sbjct: 290 RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVLGPW 349

Query: 339 SESPVD 344
             SP D
Sbjct: 350 V-SPSD 354



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 137/310 (44%), Gaps = 44/310 (14%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           QI+ G+ H+  +T +G++Y  G N   QLG      + + IP     L        A G 
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPLLIPE----LQNYVVVAIACGS 95

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+T  G+VLSWG    G+LG   + SI+          P++I+ L    V   A G
Sbjct: 96  RHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIEL--------PKIIRSLVSKHVVQIACG 147

Query: 247 FLHSACIDENGRVY-----IFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCGGY 298
             HS  +   G +Y     I+G   V     QE +H   P  ++ L   P +  + CGG 
Sbjct: 148 NNHSLALTSCGELYSWGSNIYGQLGVKPP--QELSHCNYPLRLTTLLGIPLAT-IACGGN 204

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+ +++    ++ +G N  G LG+        P +++   +          +  V+CG +
Sbjct: 205 HSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRT--------LGVRFVACGDE 256

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            +  ++ EG + T G G            + GQLGHG++ + + P +V         QV+
Sbjct: 257 FSVFLTNEGGVFTCGAG------------TYGQLGHGSNTNEMLPRMVMELMGSTITQVA 304

Query: 418 CGFNHTGALL 427
           CG  HT AL+
Sbjct: 305 CGNRHTLALV 314



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 44/287 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           +L+ WG  S+GQLG+G    + I IP+++        +Q A G   ++ +T  GKV + G
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
                +LGH   +             P LI EL+   V   A G  HS  + E G+V  +
Sbjct: 62  NNDQAQLGHNLPTK-----------RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSW 110

Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD       ++ D+ + +     R  SL+SK  +  ++ CG  H+  LTS GELY+WGSN
Sbjct: 111 GDNDCGQLGQSTDQSIIELPKIIR--SLVSK--HVVQIACGNNHSLALTSCGELYSWGSN 166

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             G LG+     L   + P R+           +   +  ++CG  H+  IS+   + +G
Sbjct: 167 IYGQLGVKPPQELSHCNYPLRL--------TTLLGIPLATIACGGNHSFLISKSSAV-FG 217

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           +          G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 218 F----------GRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACG 254



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  + G+LGL    +R  P          ++ +ACG   ++FLT  G V+  G   +GQ
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
           LG   N    L  + +  +   + Q++ G  H+ A+    G +Y +G  S+GQ  LG ++
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGNRS 335

Query: 162 AKVIPIPTKV 171
              + +P +V
Sbjct: 336 TNSVTLPQEV 345


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 170/377 (45%), Gaps = 51/377 (13%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LGLG +E           W+P         ++  +ACG  HTLFLT +G VY
Sbjct: 6   WGNASHGQLGLGGIEEEQILTPSRIPWKP-------DSAVNQIACGHRHTLFLTASGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND+ QLG       +  PL+I  L+  V+ QI+ G  HS A++  G+++ WG N  
Sbjct: 59  ACGSNDYSQLGHELP---TKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG       ++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG  
Sbjct: 116 GQLGHASD-QDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVS 174

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
             + +          TP  +  L G+ V   A G  HS  I ++  V+ +G     ++  
Sbjct: 175 SPNDL------QQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  +   P+ +  L       V CG   +  LT  G ++T G+   G LG G       
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEML 288

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSG 388
           P  V        ++ + ++I  V+CG +HT A+  S G+I  +G G            S 
Sbjct: 289 PRMV--------MELMGSTISQVACGNRHTLALVPSRGRIYGFGLG------------SS 328

Query: 389 GQLGHGNDVDYIHPTIV 405
           GQLG  N      P +V
Sbjct: 329 GQLGTRNTKSLNLPQLV 345



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 140/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L ++ RP+     + + +  +ACG  H++ L+E G V++ G N+ GQL
Sbjct: 61  GSNDYSQLG-HELPTK-RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKA 161
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+     
Sbjct: 119 GHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPND 178

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P ++  L GI     A G   S  ++    V  WG    G+LG   E       
Sbjct: 179 LQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------- 231

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLP 289

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  +   L+ P+ V GP
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQLVIGP 348



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 30/280 (10%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++         Q A G   ++ +T  GKV + G
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P  I EL+   +   A G  HS  + E G+V+ +
Sbjct: 62  SNDYSQLGHELPTK-----------RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSW 110

Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           GD    ++    + +  + P ++  L      ++ CG  H+  LT  GELY+WGSN  G 
Sbjct: 111 GDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQ 170

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
           LG+ S + L   ++   P   + +  I  S   ++CG  H+  IS+   + +GW      
Sbjct: 171 LGVSSPNDL---QQSNTPMRLTTLLGIPVSA--IACGGNHSFLISKSSAV-FGW------ 218

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 219 ----GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 26/150 (17%)

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           PS I   P S   ++ CG  HT  LT+ G++Y  GSN+   LG      L +   +Q P 
Sbjct: 27  PSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLG----HELPTKRPLQIPE 82

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +  V      I  ++CG +H+ A+SE G++ +WG             +  GQLGH +D 
Sbjct: 83  LQDYV------ITQIACGSRHSMALSEWGQVFSWG------------DNECGQLGHASDQ 124

Query: 398 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           D +  P IV    +   +Q++CG NH+ AL
Sbjct: 125 DIVKLPKIVRNLVSKTVVQIACGSNHSLAL 154


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  123 bits (309), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 102/337 (30%), Positives = 158/337 (46%), Gaps = 36/337 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YGRLG GS  +R  PV  S   + S  A++    H++ L   G ++  G N+ GQ
Sbjct: 292 WGYNYYGRLGDGSTINRIVPVQVSGLTEVS--AISAAFGHSMALKSDGTLWTWGYNNRGQ 349

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + +I  SL P+++      V  IS GY +S A+  DG ++ WG+N  GQ G      
Sbjct: 350 LG-NNSITQSLVPVQV---LTGVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTID 405

Query: 163 KVIPIPTKVECLSGI--FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            ++PI  +V  L+G+   +  ++  +  S+A+   G V  WG   +G+LG+         
Sbjct: 406 SLVPI--QVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNS------- 456

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P     L GV V I +AG  HS  +  +G  +I+G  +  ++       +  
Sbjct: 457 --ATQSLVPVQALGLTGV-VSI-SAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLV 512

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     +  G YH+  L S G ++ WG N +G LG  S  V           S 
Sbjct: 513 PVQVPGLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTV-----------SL 561

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
            P+ Q+ T    VS G  H+ A+ S+G +  WGWG +
Sbjct: 562 VPI-QVLTGTTSVSAGTYHSMALKSDGAV--WGWGNN 595



 Score =  105 bits (263), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 99/354 (27%), Positives = 152/354 (42%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +  G  H L L   G V+A G N +G+LG    I   + P+++SGL  EV  IS  + HS
Sbjct: 273 VVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTIN-RIVPVQVSGL-TEVSAISAAFGHS 330

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG L+ WG N+ GQLG       ++P    V+ L+G+ +  A  G++ S+AV   
Sbjct: 331 MALKSDGTLWTWGYNNRGQLGNNSITQSLVP----VQVLTGVASISA--GYDYSLAVKSD 384

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACI 253
           G V +WG    G+ G+           +     P  +  L GV    A +   + HS  +
Sbjct: 385 GTVWAWGRNYYGQFGNNS---------TIDSLVPIQVSGLTGVTSISATSSNNYSHSLAL 435

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             +G V+ +G  +  ++       +  P     L     +  G  H+  L S G  + WG
Sbjct: 436 KSDGTVWGWGYNSTGQLGNNSATQSLVPVQALGLTGVVSISAGSNHSMALKSDGTAWIWG 495

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
            N +G LG  S      P +V G           + +  +S G  H+ A+ S+G +  W 
Sbjct: 496 GNSDGQLGNNSTAQSLVPVQVPG----------LSGVSAISAGNYHSMALKSDGTV--WA 543

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           W          G +S GQLG+ +    + P  V  G       VS G  H+ AL
Sbjct: 544 W----------GRNSSGQLGNNSTTVSLVPIQVLTGTT----SVSAGTYHSMAL 583



 Score =  105 bits (261), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 110/440 (25%), Positives = 178/440 (40%), Gaps = 86/440 (19%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A +WG    G+LG  S      PV         + A++ G  H++ L   G V+A G N 
Sbjct: 491 AWIWGGNSDGQLGNNSTAQSLVPVQVPGLS--GVSAISAGNYHSMALKSDGTVWAWGRNS 548

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG + +   SL P+++         +S G +HS A+  DG ++ WG N   ++    
Sbjct: 549 SGQLG-NNSTTVSLVPIQVL---TGTTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNT 604

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQ--SVAVTGGGK------------VLSWGAGG 205
              +++P+ T +      F        ++  S+A + GG             V +WG GG
Sbjct: 605 NLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGG 664

Query: 206 SGRLGHGQESSIL--------------------------------------GFLRSTSEY 227
           SG LG+G    +L                                      G L + S  
Sbjct: 665 SGVLGNGTGEQMLVGYPVRDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTV 724

Query: 228 TPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
           T  +  ++ G+  V    AG LHS  +  +G V+ +G     ++   +G+  +R  P  +
Sbjct: 725 TSSIPVQVSGLTGVSSVKAGRLHSMALKSDGTVWAWGYNTEGQL--GDGSTTQRLVPVQV 782

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           S L     +  G YH+ V+ S G ++ WG N NG LG  S      P +V G        
Sbjct: 783 SGLEDVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVPVQVPG-------- 834

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
              T + L+S G   +AA+ S+G  L W            G ++ GQL  G+++  + P 
Sbjct: 835 --LTGVALISAGTNTSAAVKSDGTALAW------------GSNTYGQLCDGSNIQRLIPV 880

Query: 404 IVNFGENVKALQVSCGFNHT 423
            V+    V AL +    +H+
Sbjct: 881 QVSEPVGVGALSMVVANSHS 900



 Score =  104 bits (259), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 86/289 (29%), Positives = 127/289 (43%), Gaps = 17/289 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG LG  S  +   PV  S      + ++  G  H++ L   G V+A G N  GQ
Sbjct: 710 WGDNAYGMLGNNSTVTSSIPVQVSGLT--GVSSVKAGRLHSMALKSDGTVWAWGYNTEGQ 767

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +    L P+++SGL+ +V+ IS G +HS  I  DG ++ WG+NSNGQLG      
Sbjct: 768 LG-DGSTTQRLVPVQVSGLE-DVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTG 825

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++P+  +V  L+G+    A  G   S AV   G  L+WG+   G+L  G          
Sbjct: 826 SLVPV--QVPGLTGVALISA--GTNTSAAVKSDGTALAWGSNTYGQLCDGS--------- 872

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P  + E  GV          HS  +  +G V+  G      +       ++ P 
Sbjct: 873 NIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPV 932

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
               L     +  G YH+  L S G ++ WG N  G LG  S     +P
Sbjct: 933 QTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 101/389 (25%), Positives = 166/389 (42%), Gaps = 42/389 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  S      PV   A     + +++ G  H++ L   G  +  G N  GQ
Sbjct: 444 WGYNSTGQLGNNSATQSLVPV--QALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQ 501

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + +   SL P+++ GL   V  IS G +HS A+  DG ++ WG+NS+GQLG      
Sbjct: 502 LG-NNSTAQSLVPVQVPGLSG-VSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTV 559

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++PI    + L+G  T   + G   S+A+   G V  WG     ++        L  ++
Sbjct: 560 SLVPI----QVLTG--TTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVK 613

Query: 223 ST-----SEYTPRLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           +      S++    +   + +K    ++G  + +S  +  +  V+ +G      +    G
Sbjct: 614 TAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTG 673

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
                   +  L   E++  G  H+  L S G  + WG N  G LG  S      P +V 
Sbjct: 674 EQMLVGYPVRDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVS 733

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           G           T +  V  G  H+ A+ S+G +  W W          G+++ GQLG G
Sbjct: 734 G----------LTGVSSVKAGRLHSMALKSDGTV--WAW----------GYNTEGQLGDG 771

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           +    + P  V+  E+V A  +S G  H+
Sbjct: 772 STTQRLVPVQVSGLEDVIA--ISAGDYHS 798



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 103/353 (29%), Positives = 157/353 (44%), Gaps = 52/353 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGG-AHTLFLTETGCVYATGLNDF 100
           WG   YG+ G  S      P+  S      S+ A +    +H+L L   G V+  G N  
Sbjct: 390 WGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNST 449

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG + +   SL P++  GL   VV IS G +HS A+  DG  ++WG NS+GQLG    
Sbjct: 450 GQLG-NNSATQSLVPVQALGLTG-VVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNST 507

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  ++P+  +V  LSG+    A  G   S+A+   G V +WG   SG+LG+         
Sbjct: 508 AQSLVPV--QVPGLSGVSAISA--GNYHSMALKSDGTVWAWGRNSSGQLGNNS------- 556

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P  I+ L G      +AG  HS  +  +G V+ +G+    K++         
Sbjct: 557 --TTVSLVP--IQVLTGTTS--VSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLV 610

Query: 281 P------SLISK-----LPYSEEVVC------GGY-HTCVLTSGGELYTWGSNENGCLGI 322
           P      + IS      +P S+E+        G Y ++  L S   ++ WG   +G LG 
Sbjct: 611 PVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGN 670

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
           G+ + +             PV  + T +  +S G  H+ A+ S+G    W WG
Sbjct: 671 GTGEQM---------LVGYPVRDL-TGVEQISAGEGHSLALRSDGT--AWAWG 711



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 151/341 (44%), Gaps = 55/341 (16%)

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           +G N  G +  +  I  + +  +I  ++++  Q+  GY+H+ A+  DG ++ WG N  G+
Sbjct: 241 SGFNLAGNVKANTMINGTADNAKIE-IQEKYAQVVAGYYHNLALKSDGTVWAWGYNYYGR 299

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +++P+  +V  L+ +    AA G   S+A+   G + +WG    G+LG+   
Sbjct: 300 LGDGSTINRIVPV--QVSGLTEVSAISAAFG--HSMALKSDGTLWTWGYNNRGQLGN--- 352

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           +SI      T    P  ++ L GV     +AG+ +S  +  +G V+ +G         Q 
Sbjct: 353 NSI------TQSLVP--VQVLTGVAS--ISAGYDYSLAVKSDGTVWAWGRNYYG----QF 398

Query: 275 GNHARRPSLI-------SKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSID 326
           GN++   SL+       + +          Y H+  L S G ++ WG N  G LG  S  
Sbjct: 399 GNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNSAT 458

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
               P +  G           T +V +S G  H+ A+ S+G    W WGG          
Sbjct: 459 QSLVPVQALG----------LTGVVSISAGSNHSMALKSDGT--AWIWGG---------- 496

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +S GQLG+ +    + P  V     V A  +S G  H+ AL
Sbjct: 497 NSDGQLGNNSTAQSLVPVQVPGLSGVSA--ISAGNYHSMAL 535



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 101/260 (38%), Gaps = 55/260 (21%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG GS   R  PV  S  E   + A++ G  H++ +   G V+A G N  GQ
Sbjct: 760  WGYNTEGQLGDGSTTQRLVPVQVSGLE--DVIAISAGDYHSMVIKSDGTVWAWGRNSNGQ 817

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG +   G SL P+++ GL   V  IS G + S+A+  DG    WG N+ GQL  G    
Sbjct: 818  LGNNSTTG-SLVPVQVPGLTG-VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQ 875

Query: 163  KVIPI----PTKVECLSGIFTKQAAL---------------------------------- 184
            ++IP+    P  V  LS +     +L                                  
Sbjct: 876  RLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTL 935

Query: 185  ----------GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                      G   S+A+   G +  WG  G G+LG    +S L  + S   + P     
Sbjct: 936  GLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAPVASKRWFFPDDYLN 995

Query: 235  LEGVKVKIAAAGFLHSACID 254
            L G      A G   S  ID
Sbjct: 996  LGG---GYEAPGTFESGTID 1012



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WG+  YG+L  GS   R  PV  S        ++    +H+L L   G V+  G ND
Sbjct: 857 ALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRND 916

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +G +G + +I  S  P++  GL   VV IS G +HS A+  DG ++ WG N  GQLG   
Sbjct: 917 YGPIG-NNSITDSKVPVQTLGLAG-VVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNS 974

Query: 160 KAAKVIPIPTK 170
             +++ P+ +K
Sbjct: 975 TTSRLAPVASK 985


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 176/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V++I       
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI------- 591

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  ++P  V     E+  D+   S+V   CG   TAAI
Sbjct: 623 TDDKNTPTLV-----EALKDKQVRSVV---CGINFTAAI 653



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVES----- 466

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 467 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 511

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+      PT V         QV+CG   T AL
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 421 SSI-------SCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVP 461

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 462 REVESLKGLRTVRAACGVWHTAAVVEVM 489


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  123 bits (309), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 157/324 (48%), Gaps = 27/324 (8%)

Query: 8   AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
           A +K++LK D+ L    G     + +   + F  ++G+ ++G+LGLG+  +  +P    A
Sbjct: 27  APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
                +K  ACG  HTL  T  G +YA G N+ GQLG+ + N   S   +     +  + 
Sbjct: 85  LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            ++ G + S+A+T DG LYM G NS GQ+GLGK++  + P    V    G      + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G + ++G   SG+LG   E       +  +   P+ + ++    V++A  G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253

Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
             H+  + EN  VY FG     ++     +F+    +R P ++        +   CG  H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
           T ++T  G LYT+G   +G LG+G
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLG 331



 Score =  115 bits (288), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 44/346 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + E+G V+  G + F     S+    +  PLRIS           G  H++ +T +G+L+
Sbjct: 9   IPESGAVFTFGKSKFADNAPSKFWLKNDVPLRIS----------CGDEHTALVTENGKLF 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGLG K    +  PT V+ L     K  A G   ++  T  G + + G   
Sbjct: 59  MFGSNNWGQLGLGTKTT--VNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116

Query: 206 SGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G+LG G   + +    +   ++  P          +K+ AAG   SA + ++GR+Y+ G
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGP----------IKMLAAGSNTSAALTQDGRLYMRG 166

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +  ++   + ++A  P  +S       V CG YH+  +T  G LYT+G  ++G LG+ 
Sbjct: 167 DNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL- 225

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
                 S E++        V  I   +V V+CG  HT A++E ++ ++G G         
Sbjct: 226 ------STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTENEVYSFGLG--------- 270

Query: 384 GHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                GQLGHG  + +   P +V      +    +CG NHT  + +
Sbjct: 271 ---QFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD 313



 Score =  113 bits (282), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 91/265 (34%), Positives = 134/265 (50%), Gaps = 17/265 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  + G+LGLG    R    +   F K   +K LA G   +  LT+ G +Y  G N  GQ
Sbjct: 113 GGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQ 172

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G+ +    +L P  +S + K V  +S GY+HS+ +TVDG LY +G+  +G+LGL  +  
Sbjct: 173 IGLGKE-SNALTPQEVS-VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKL 230

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V  +      Q A G   +VA+T   +V S+G G  G+LGHG       F+ 
Sbjct: 231 ANHKVPQQVTDIPDRVV-QVACGGGHTVALTEN-EVYSFGLGQFGQLGHGT------FIF 282

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--R 280
            +    PR+++     +VK AA G  H+A I +NG +Y FGD    K+   E N     +
Sbjct: 283 ESR--LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFK 340

Query: 281 PSLISK-LPYS-EEVVCGGYHTCVL 303
           P+L  + L Y    V CGG H  VL
Sbjct: 341 PTLCPRFLDYHVHSVTCGGCHMLVL 365



 Score =  112 bits (280), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 104/357 (29%), Positives = 159/357 (44%), Gaps = 46/357 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G ++  G N++GQLG+      + +P  +  L+ E V+++  G  H
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALRSERVKLTACGRTH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
           +   T  G LY  G N+ GQLGLG    +     T    L   F KQ      A G   S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDR-----TSFH-LVEFFNKQGPIKMLAAGSNTS 153

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++   G    G++G G+ES+ L         TP+ +    G +V   + G+ H
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202

Query: 250 SACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +  +G +Y FG++   K+        NH + P  ++ +P    +V CGG HT  LT 
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
             E+Y++G  + G LG G+        RV   F +  V          +CG  HTA I++
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKH-------AACGENHTALITD 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
             +L     G HG            LG  N  +   PT+     +     V+CG  H
Sbjct: 314 NGLLYTFGDGRHGKLG---------LGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361



 Score = 45.8 bits (107), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G G +G+LG G+   ESR  P V   F K  +K  ACG  HT  +T+ G +Y  G    
Sbjct: 267 FGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325

Query: 101 GQLGISE 107
           G+LG+ E
Sbjct: 326 GKLGLGE 332



 Score = 40.0 bits (92), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
           +G+G +G+LGLG  +  ++++P +C  F  + + ++ CGG H L L +
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 157/340 (46%), Gaps = 40/340 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  ++
Sbjct: 329 WGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 388

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 389 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 447

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P ++E L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 448 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 505

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S L          P  +  L+       A G   +  +   G VY  G   
Sbjct: 506 GRLGHGDKESKL---------VPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGS-C 555

Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           V   L       + P+ +  KL  S  EE+ CG YH  VLTS  E++TWG   NGCLG G
Sbjct: 556 VYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHG 615

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             +  ++P  V     E+  D+   SI   +CG   TAAI
Sbjct: 616 DTNDRNTPTLV-----EALKDKQVKSI---ACGTNFTAAI 647



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++ +   P  I  L    ++ ++
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPH---PKLIESLSNTNIELVA 363

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 364 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSSISCGP 421

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR I+ L+G++   AA G
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRKSV---------SLPREIESLKGLRTVQAACG 472

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ +  L  P  
Sbjct: 473 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKESKLVPTRVVTLDEPNF 530

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   T  L+  G +YT GS   G LG    D    P  V+G  S+S V++I    
Sbjct: 531 CQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADG-KLPTPVEGKLSKSFVEEI---- 585

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S  ++ TWG G +            G LGHG+  D   PT+V   +
Sbjct: 586 ---ACGAYHVAVLTSRTEVFTWGKGAN------------GCLGHGDTNDRNTPTLVEALK 630

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   ++CG N T A+
Sbjct: 631 DKQVKSIACGTNFTAAI 647



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 31/270 (11%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G E +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 295 LPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP-------- 346

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI+ L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 347 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 405

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  ++      
Sbjct: 406 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLR 465

Query: 342 PVDQIC-----TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            V   C      ++V V  G   ++  S GK+ TWG G              G+LGHG+ 
Sbjct: 466 TVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGDK 513

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              + PT V   +     QV+CG + T AL
Sbjct: 514 ESKLVPTRVVTLDEPNFCQVACGHSMTVAL 543



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 24/207 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G  +  ++     +    P LI  L 
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+      P+RV GP     V 
Sbjct: 356 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 415

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
            I       SCG  HTA + S G++ T+G     GTF        G LGHG+      P 
Sbjct: 416 SI-------SCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDRKSVSLPR 456

Query: 404 IVNFGENVKALQVSCGFNHTGALLEYV 430
            +   + ++ +Q +CG  HT A++E +
Sbjct: 457 EIESLKGLRTVQAACGVWHTAAVVEVM 483


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG   L+   +P    A E   ++ ++CG  H+L +   G V+A G    GQL
Sbjct: 59  GDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQL 118

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +L P +I  L   +++Q+S G +HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 119 GIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELP 178

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      +  G   
Sbjct: 179 SQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------AFFGSNV 231

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y PR +  L+ + V   + G  H+A + +NG+V+ FGD +  ++          P 
Sbjct: 232 PVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQ 291

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +     ++ CG YHT   + + G++ ++G
Sbjct: 292 LMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 27/312 (8%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           L+  A G  H+L L   G V++ G N  GQLG    +    +P  I  L+   V+ +S G
Sbjct: 36  LRQAASGERHSLLLLSDGAVHSCGDNSRGQLG-RRGLQREEQPKPIQALETLRVELVSCG 94

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+   ++  IP K++ L+GI   Q + G   S+A
Sbjct: 95  KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FKEINLIPQKIKTLTGIKIIQVSCGNYHSLA 153

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G+E          S+ +P+ ++ L+G+ +   AAG  HS 
Sbjct: 154 LSEDGQVFSWGSNSHGQLGLGKELP--------SQASPQRVRSLDGIPLAQVAAGGAHSF 205

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
            +  +G  + +G     ++ F   N    + +P  +S L       + CG  HT VLT  
Sbjct: 206 ALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQN 265

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--IS 364
           G+++T+G N  G LG         P+ ++G   E  V QI        CG  HT A   +
Sbjct: 266 GKVFTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQI-------DCGSYHTLAYVYT 316

Query: 365 EGKILTWGWGGS 376
            G+++++G G S
Sbjct: 317 TGQVVSFGRGPS 328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 40/310 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  DG ++  G NS GQ  LG++  +    P  ++ L  +  +  +
Sbjct: 35  ELRQAASGERHSLLLLSDGAVHSCGDNSRGQ--LGRRGLQREEQPKPIQALETLRVELVS 92

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I           P+ IK L G+K+   
Sbjct: 93  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEI--------NLIPQKIKTLTGIKIIQV 144

Query: 244 AAGFLHSACIDENGRVYIFGDRA-----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
           + G  HS  + E+G+V+ +G  +     + K L  + +  R  SL   +P + +V  GG 
Sbjct: 145 SCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL-DGIPLA-QVAAGGA 202

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  L+  G  + WGSN  G L     +V   P +   P S S +  +   +V +SCG +
Sbjct: 203 HSFALSLSGTSFGWGSNNAGQLAFFGSNV---PVQSYKPRSVSALKTL--GVVYISCGHE 257

Query: 359 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--Q 415
           HTA +++ GK+ T+            G +S GQLGH    +   P ++   E ++ L  Q
Sbjct: 258 HTAVLTQNGKVFTF------------GDNSCGQLGHSPTAEKTGPQLM---EGIEGLVSQ 302

Query: 416 VSCGFNHTGA 425
           + CG  HT A
Sbjct: 303 IDCGSYHTLA 312



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 16/231 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E    P          +  ++CG  H+L L+E G V++ 
Sbjct: 106 RVFA--WGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSW 163

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ + +     P R+  L    + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 164 GSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 223

Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L   G         P  V  L  +     + G E +  +T  GKV ++G    G+LGH  
Sbjct: 224 LAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS- 282

Query: 214 ESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     T+E T P+L++ +EG+  +I    +   A +   G+V  FG
Sbjct: 283 ---------PTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 39/258 (15%)

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +QAA G   S+ +   G V S G    G+LG        G  R   E  P+ I+ LE ++
Sbjct: 37  RQAASGERHSLLLLSDGAVHSCGDNSRGQLGRR------GLQR---EEQPKPIQALETLR 87

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
           V++ + G  HS  +   GRV+ +G  +  ++    F+E N    P  I  L   +  +V 
Sbjct: 88  VELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLI--PQKIKTLTGIKIIQVS 145

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG YH+  L+  G++++WGSN +G LG+G  +    SP+RV+       +D I   +  V
Sbjct: 146 CGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRS------LDGI--PLAQV 197

Query: 354 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGEN 410
           + G  H+ A+S     ++GWG ++           GQL   G    V    P  V+  + 
Sbjct: 198 AAGGAHSFALSLSGT-SFGWGSNN----------AGQLAFFGSNVPVQSYKPRSVSALKT 246

Query: 411 VKALQVSCGFNHTGALLE 428
           +  + +SCG  HT  L +
Sbjct: 247 LGVVYISCGHEHTAVLTQ 264



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  +G+LGLG  L S+  P    + +   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 163 WGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 222

Query: 102 QLGI--SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL    S     S +P  +S LK   VV IS G+ H++ +T +G+++ +G NS GQLG  
Sbjct: 223 QLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS 282

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             A K    P  +E + G+ ++     +     V   G+V+S+G G S +
Sbjct: 283 PTAEKT--GPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPSCK 330



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G +++ AA+G  HS  +  +G V+  GD +  ++  +      +P  I  L     E V 
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG    ++  P++++              I+ V
Sbjct: 93  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKT--------LTGIKIIQV 144

Query: 354 SCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+SE G++ +W            G +S GQLG G ++     P  V   + +
Sbjct: 145 SCGNYHSLALSEDGQVFSW------------GSNSHGQLGLGKELPSQASPQRVRSLDGI 192

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 193 PLAQVAAGGAHSFAL 207


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 153/336 (45%), Gaps = 27/336 (8%)

Query: 43  WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LG G+  + R  P+     +   + A A G AH+L +T  G V A G N  G
Sbjct: 67  WGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVG 126

Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG    I  S  P+ +       V  ++ G++HS A+T  G ++ WG NS GQLG G +
Sbjct: 127 QLGDGTTINRS-TPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P+   V   SG      A G   S+A+T  G V +WG   +G+LG G        
Sbjct: 186 TNRSTPV--AVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTR------ 237

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T+  TP ++    G  V   A G  HS  +   G    +G+  V + L    N  R 
Sbjct: 238 ---TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQ-LGDGSNINRD 293

Query: 281 PSLISKLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            S+  +LP    V  V GG  H+  LTS G + +WGSN  G LG G+    ++P  V  P
Sbjct: 294 ASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVSLP 353

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
                      +I  V+ G     A+ S G +L WG
Sbjct: 354 PG--------VTITAVAAGDLFGLALTSAGTVLAWG 381



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 156/363 (42%), Gaps = 44/363 (12%)

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
           V SA  +H+  A       T+    +  V A G N +GQLG      Y   P+ + GL K
Sbjct: 39  VSSAIAQHTSVAQHRPSPTTV---ASDAVLAWGDNYYGQLGDGTTNNYRTVPIPV-GLPK 94

Query: 124 --EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
             EV   + G  HS A+T  G +  WG+N+ GQLG G    +  P+   V    G     
Sbjct: 95  GTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPV--DVRLPPGTTVTA 152

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A GF  S+A+T  G V +WG   +G+LG G           T+  TP  +    G  + 
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR---------TNRSTPVAVSFPSGTVIT 203

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-LISKLPYSEEVVC---GG 297
             AAG +HS  +   G V+ +GD +  ++   +G    R + ++  LP    V     GG
Sbjct: 204 AVAAGGMHSLALTSAGTVFAWGDNSTGQL--GDGTRTNRSTPVVVGLPVGTIVTAIAGGG 261

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            H+  +TS G    WG+N  G LG GS     +   V+ P          T++  V+ G 
Sbjct: 262 SHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPG--------TTVTAVAGGL 313

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H+ A+ S G +L+W            G ++ GQLG G   D   P  V+    V    V
Sbjct: 314 THSLALTSVGTVLSW------------GSNNWGQLGDGTARDRNTPGSVSLPPGVTITAV 361

Query: 417 SCG 419
           + G
Sbjct: 362 AAG 364



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 122/292 (41%), Gaps = 15/292 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV        ++ A+A G  H+L LT  G V+A G N  GQ
Sbjct: 120 WGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       S  P+ +S     V+  ++ G  HS A+T  G ++ WG NS GQLG G + 
Sbjct: 180 LGDGTRTNRS-TPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRT 238

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V    G      A G   S+AVT  G   +WG    G+LG G         
Sbjct: 239 NRSTPV--VVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSN-----IN 291

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S +    ++   G  V   A G  HS  +   G V  +G     ++          P
Sbjct: 292 RDASVH----VRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTP 347

Query: 282 SLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
             +S  P      V  G      LTS G +  WG N  G LG G+  V  +P
Sbjct: 348 GSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 103/246 (41%), Gaps = 12/246 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV  S      + A+A GG H+L LT  G V+A G N  GQ
Sbjct: 172 WGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQ 231

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S   +    +   V  I+ G  HS A+T  G    WG N  GQLG G    
Sbjct: 232 LGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNIN 291

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   +   V    G      A G   S+A+T  G VLSWG+   G+LG G          
Sbjct: 292 RDASV--HVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTAR------- 342

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                TP  +    GV +   AAG L    +   G V  +G   V + L       RR  
Sbjct: 343 --DRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQ-LGDGTTTVRRTP 399

Query: 283 LISKLP 288
           + + LP
Sbjct: 400 VAASLP 405



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 12/134 (8%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WGN   G+LG GS  +R   V        ++ A+A G  H+L LT  G V + G N+
Sbjct: 273 ARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNN 332

Query: 100 FGQLGI----SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           +GQLG       N     SL P         +  ++ G     A+T  G +  WG N  G
Sbjct: 333 WGQLGDGTARDRNTPGSVSLPP------GVTITAVAAGDLFGLALTSAGTVLAWGGNIVG 386

Query: 154 QLGLGKKAAKVIPI 167
           QLG G    +  P+
Sbjct: 387 QLGDGTTTVRRTPV 400


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 189/433 (43%), Gaps = 78/433 (18%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WG+   G+LG G++ +R  PV+ S+     + AL+ GG H+L L   G   A G N 
Sbjct: 316 ARAWGSNVSGQLGDGTVSNRTSPVLVSSLT--GVTALSAGGNHSLALLADGTARAWGANV 373

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG       +L P+ + GL   V  ++ G +HS A+  +G +  WG N+ GQLG G 
Sbjct: 374 SGQLGDGTTTQRTL-PVGLPGLTG-VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGS 431

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG------- 212
            A +  P+   V  L+G+ +  A  G++ S+A+   G V +WG   SG+LG G       
Sbjct: 432 TAQRTAPV--VVPALTGVVSLTA--GYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGT 487

Query: 213 --QESSI---------------------------------LGFLRSTSEYTPRLIKELEG 237
             Q S +                                 LG   +++ +TP  +  L  
Sbjct: 488 PVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTN 547

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           V V IAA G  +S  +  NG V  +G      +      ++  P  +  +     +  G 
Sbjct: 548 V-VAIAAGGD-YSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVTNVVAIAAGA 605

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            H   L + G +Y WG N+ G LG G+    ++P +V G           T++V ++ GW
Sbjct: 606 NHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPG----------LTNVVAIATGW 655

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQ 415
            H+ A+ ++G +  WG+  +             QLG G+  +Y   P  V    NV A  
Sbjct: 656 DHSLALRADGTVYAWGYNYAR------------QLGDGSTANYRQTPAPVPGLTNVVA-- 701

Query: 416 VSCGFNHTGALLE 428
           V+ G N + ALL 
Sbjct: 702 VTAGGNQSLALLS 714



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 174/425 (40%), Gaps = 70/425 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P            A++ GG ++L L   G V A G N +GQ
Sbjct: 69  WGDNASGQLGDGTTTQRSSPTAVPGLA--GAVAVSAGGEYSLALLGDGTVRAWGNNTYGQ 126

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +   P  + GL   VV I+ G +H+ A+  DG +  WG N+ GQLG G    
Sbjct: 127 LG-DGTTPHRASPGAVPGLSG-VVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQ 184

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L+G+    A  G   S+AV   G V +WG    GRLG G          
Sbjct: 185 RRTPV--AVLGLTGVVAIAA--GENHSLAVLADGTVRAWGNNTYGRLGDGT--------- 231

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   +P L+  L GV     AAG  HS  +  +G V  +G  A  ++          P 
Sbjct: 232 TTQRTSPVLVSSLTGVTAI--AAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPV 289

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L    E+  GG H+  L + G    WGSN +G LG G++    SP  V        
Sbjct: 290 AVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSS------ 343

Query: 343 VDQICTSIVLVSCGWKHT-AAISEGKILTWG----------------------------- 372
                T +  +S G  H+ A +++G    WG                             
Sbjct: 344 ----LTGVTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAA 399

Query: 373 --WGGSH-------GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
              GG H       GT    GH++ GQLG G+      P +V     V +L  + G++H+
Sbjct: 400 LAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGVVSL--TAGYDHS 457

Query: 424 GALLE 428
            ALL 
Sbjct: 458 LALLS 462



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 164/370 (44%), Gaps = 52/370 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GS   R  PVV  A     + +L  G  H+L L   G V A G N  GQ
Sbjct: 419 WGHNTYGQLGDGSTAQRTAPVVVPALT--GVVSLTAGYDHSLALLSDGTVRAWGNNASGQ 476

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG-YHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG          P+++SGL   VV +S G  +H+ A+  DG +  WG N NGQLG G  +
Sbjct: 477 LG-DGTTNQRGTPVQVSGLT-NVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTS 534

Query: 162 AKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            +  P+      +SG+    A A G + S+A+   G V SWG G  G LG          
Sbjct: 535 NRWTPV-----AVSGLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLG---------- 579

Query: 221 LRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            R    Y+P   K + GV   +A AAG  H   +  +G VY +G    D     +G   +
Sbjct: 580 -RDYDTYSP-TPKAVPGVTNVVAIAAGANHVLALRADGTVYAWGRN--DFGQLGDGTTVQ 635

Query: 280 R--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQG 336
           R  P  +  L     +  G  H+  L + G +Y WG N    LG GS  +   +P  V G
Sbjct: 636 RNTPVQVPGLTNVVAIATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPG 695

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                      T++V V+ G   + A+ S G +  WG         ++ H   G+LG+G+
Sbjct: 696 ----------LTNVVAVTAGGNQSLALLSSGAVHAWG---------DNSH---GELGNGS 733

Query: 396 DVDYIHPTIV 405
            +    P  V
Sbjct: 734 TLTPPAPVAV 743



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 151/353 (42%), Gaps = 42/353 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           LA G AH+L  T  G V A G N  GQLG       S  P  + GL   V  +S G  +S
Sbjct: 50  LASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRS-SPTAVPGLAGAVA-VSAGGEYS 107

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG +  WG N+ GQLG G    +    P  V  LSG+    A  G   ++A+   
Sbjct: 108 LALLGDGTVRAWGNNTYGQLGDGTTPHRA--SPGAVPGLSGVVAIAA--GNNHALALLSD 163

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G          +T   TP  +  L GV V I AAG  HS  +  
Sbjct: 164 GTVRAWGYNAYGQLGDGT---------TTQRRTPVAVLGLTGV-VAI-AAGENHSLAVLA 212

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V  +G+    ++          P L+S L     +  G  H+  + + G +  WG N
Sbjct: 213 DGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYN 272

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWG 374
            +G LG G+     +P  V G           T +  +S G  H+ A +++G    W   
Sbjct: 273 ASGRLGDGTTTQRATPVAVPG----------LTGVTEISAGGGHSLALLADGTARAW--- 319

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                    G +  GQLG G   +   P +V+    V AL  S G NH+ ALL
Sbjct: 320 ---------GSNVSGQLGDGTVSNRTSPVLVSSLTGVTAL--SAGGNHSLALL 361


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 177/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   S +P  I  L    ++ ++ G
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVACG 409

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +   G LG G   +  +P       L GI     + G   +
Sbjct: 410 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGP-LEGIHVSSISCGPWHT 468

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 469 AVVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVWH 519

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P   +V
Sbjct: 520 TAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKGPKLVPTCVAALVEPNFCQV 577

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V++I       
Sbjct: 578 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGM-LPVRVEGKLHKNFVEEI------- 629

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S+ ++ TWG G +            G+LGHG+  D   PT+V   ++ +
Sbjct: 630 SCGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDKNTPTLVEALKDKQ 677

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 678 VRIVVCGINFTAAI 691



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 154/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 373 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 432

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P  ++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 433 GLLGHGNDISHWV-PKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 491

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 492 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 549

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG +   L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 550 GRLGHGDKGPKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 600

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 601 YGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGD 660

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  ++P  V     E+  D+    + +V CG   TAAI
Sbjct: 661 TDDKNTPTLV-----EALKDK---QVRIVVCGINFTAAI 691



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 119/278 (42%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 339 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 389

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 390 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHV 449

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G  + +  P  V+      
Sbjct: 450 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVES----- 504

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 505 -LKGLRT--VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK------------ 549

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         QV+CG   T AL
Sbjct: 550 GRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVAL 587



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 399

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ D+ H  P+ V GP     V
Sbjct: 400 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPKHVNGPLEGIHV 458

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 459 SSI-------SCGPWHTAVVTSAGQLFTFGDG------------SFGVLGHGDRESISVP 499

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 500 REVESLKGLRTVRAACGVWHTAAVVEVM 527


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 185/377 (49%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++A+ACG  H   +T+ G V++ G    G+LG  +  ++ +   P  + GLK   V+ ++
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 329

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G + S A+T+ G+LY+WG N+   G LG G +A + +P   K+   L GI     + G 
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP--RKLSGPLEGIHVSSVSCGP 387

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG  SS+          TPR ++ L+G++    A G
Sbjct: 388 WHTAVVTSAGQLFTFGDGTFGVLGHGDRSSV---------STPREVESLKGLRTMRVACG 438

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P  
Sbjct: 439 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKEARLVPTYVATLVEPSF 496

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   T  LT+ G++YT GS   G LG    D    P RV+G   ++ V+++    
Sbjct: 497 CQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADG-KVPTRVEGKLMKNFVEEL---- 551

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S  ++ TWG G +            G+LGHG+  D   P+IV   +
Sbjct: 552 ---ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNFPSIVEALK 596

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   + CG + T A+
Sbjct: 597 DKQVKGIICGTSFTAAI 613



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 153/348 (43%), Gaps = 56/348 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
           WG    GRLG G       P      +  +++ +ACG   +  +T +G +Y  G N  +F
Sbjct: 295 WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNF 354

Query: 101 GQLGI-SENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G LG  SE   +   P ++SG  +   V  +S G  H++ +T  G+L+ +G  + G LG 
Sbjct: 355 GLLGCGSEATQWV--PRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 412

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
           G +++  +  P +VE L G+ T + A G   + AV               GK+ +WG G 
Sbjct: 413 GDRSS--VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 470

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            GRLGHG + + L          P  +  L        A G   +  +  +G+VY  G  
Sbjct: 471 KGRLGHGDKEARL---------VPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGS- 520

Query: 266 AVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
               +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG  
Sbjct: 521 ---PVYGQLGN----PQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKG 573

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            NG LG G  D  + P  V     E+  D+    I+   CG   TAAI
Sbjct: 574 ANGRLGHGDTDDRNFPSIV-----EALKDKQVKGII---CGTSFTAAI 613



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 261 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 311

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+ +  L+   V++ A G   S  +  +G +YI+G  A +  L   G+ A +  P  +
Sbjct: 312 SHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKL 371

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           S   +  +   V CG +HT V+TS G+L+T+G    G LG G    + +P  V+      
Sbjct: 372 SGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVES----- 426

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  + V+CG  HTAA+ E             GK+ TWG G              
Sbjct: 427 -LKGLRT--MRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------ 471

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         QV+CG + T AL
Sbjct: 472 GRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVAL 509



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           + P+ ++    + V+  A G  H+A + + G V+ +G+    ++     +    P  +  
Sbjct: 260 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 319

Query: 287 LPY--SEEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESP 342
           L     E V CG Y +C +T  G+LY WG N    G LG GS      P ++ GP     
Sbjct: 320 LKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLE--- 376

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                  +  VSCG  HTA + S G++ T+G     GTF        G LGHG+      
Sbjct: 377 ----GIHVSSVSCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRSSVST 420

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLEYV 430
           P  V   + ++ ++V+CG  HT A++E +
Sbjct: 421 PREVESLKGLRTMRVACGVWHTAAVVEVM 449


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 152/326 (46%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P   +A  +H ++ +A   GG H L LT  G V++ G  D G
Sbjct: 2756 GEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDG 2815

Query: 102  QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG  +       P  I  L    V  ++ G +HS+A+T  GELY WG    G+LG G  
Sbjct: 2816 KLGHGDVTSLD-TPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDN 2874

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P   +VE L G    Q + G    Q++A+  GG V SWG G  G+LG G      
Sbjct: 2875 LTQLTP--KRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGG----- 2927

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S    +P L+ +L G+ V     G   S  +  NG VY +G     ++      H 
Sbjct: 2928 ----SEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV 2983

Query: 279  RRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R P+L+  L   +   V  G  H   +T  G+++ WG N++G  G GSI V   P  VQG
Sbjct: 2984 RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQG 3043

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
                  +D I   I  V+CG  H+ A
Sbjct: 3044 ------IDGI--KITRVACGSSHSVA 3061



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 45/358 (12%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGY 132
            GG+ +LFL T++G  YA G    G+LG+  S N+     P +I+ L + VV+   + +G 
Sbjct: 2738 GGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVN---SPHQITALSQHVVRKVAVHSGG 2794

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             H+ A+T DG ++ WG+  +G+LG G   +  +  P  +E L+G   +  A G   S AV
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHGDVTS--LDTPRCIEALNGFRVRDVAAGSNHSAAV 2852

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
            T  G++ +WG G  GRLGHG          + ++ TP+ ++ L G +V   + G     +
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGD---------NLTQLTPKRVESLVGQRVVQVSCGSRDAQT 2903

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGE 308
              + E G VY +GD    K+          P L+ KL       V CG   +  LT  G 
Sbjct: 2904 LALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGH 2963

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
            +YTWG  +   LG GS   +  P  V+G   +         ++ VS G  H  A+++ G+
Sbjct: 2964 VYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKK--------VIGVSVGALHCLAVTDAGQ 3015

Query: 368  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            +  WG         ++ H   GQ G+G+      PT+V   + +K  +V+CG +H+ A
Sbjct: 3016 VFAWG---------DNDH---GQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVA 3061



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 135/300 (45%), Gaps = 27/300 (9%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  + G+LG    +     P  I  L+ K+VV ++ G  
Sbjct: 3705 AVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCD-RPRIIESLRGKDVVDVACGGA 3763

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
            HS+AIT  GELY WGK   G+LG G    ++ P    VE L G      A G    Q+ A
Sbjct: 3764 HSAAITALGELYTWGKGRYGRLGHGDSDDQLKP--KLVEALLGYRVMDVACGSGDAQTCA 3821

Query: 192  VTG--GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            +T   GG V SWG G  G+LG G          S     P  I+ L G+ +     G   
Sbjct: 3822 ITDEEGGTVWSWGDGDYGKLGRGG---------SDGCKIPTKIESLSGLGIIKVECGSQF 3872

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
            S  +  NG VY +G     ++      H RRP  +  L   +   +  G  H  V T  G
Sbjct: 3873 SVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQG 3932

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
            E+YTWG N+ G LG G+   +  P R+        +++       VSCG  HT A S  K
Sbjct: 3933 EVYTWGDNDEGQLGDGTTTGIQKP-RLVAALQNKKINR-------VSCGSAHTVAWSTCK 3984



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 181/400 (45%), Gaps = 56/400 (14%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P VC A        LA GG  TLF +T  G VYATG    G
Sbjct: 3619 WGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLA-GGEQTLFAITSDGRVYATGYGAGG 3677

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE L+   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 3678 RLGIGGAESVTVPSLLESLQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGH 3735

Query: 158  GKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G K    +P   P  +E L G      A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3736 GNK----LPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGD-- 3789

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI--DENGRVYIFGDRAVDKML 271
                   S  +  P+L++ L G +V   A  +G   +  I  +E G V+ +GD    K+ 
Sbjct: 3790 -------SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLG 3842

Query: 272  FQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                +  + P+ I  L      +V CG   +  L++ G +YTWG  +   LG G  + + 
Sbjct: 3843 RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVR 3902

Query: 330  SPERV---QGPFSESPVDQICTSIVLVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGH 385
             P++V   QG             ++ +S G  H      +G++ TWG             
Sbjct: 3903 RPKKVMTLQG-----------KKVISISTGALHCVVCTDQGEVYTWG------------D 3939

Query: 386  SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            +  GQLG G       P +V   +N K  +VSCG  HT A
Sbjct: 3940 NDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVA 3979



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 60/355 (16%)

Query: 92   VYATGLNDFGQLG--------ISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG        + + + +  SL+P+ ++G  K +            +T  
Sbjct: 2700 VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLF----------LVTQS 2749

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+ Y  G+ SNG+LGLG   ++ +  P ++  LS    ++ A+  G   ++A+T  G+V 
Sbjct: 2750 GKAYACGEGSNGRLGLGH--SRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVF 2807

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG  +S+          TPR I+ L G +V+  AAG  HSA +  +G +
Sbjct: 2808 SWGEGDDGKLGHGDVTSL---------DTPRCIEALNGFRVRDVAAGSNHSAAVTSSGEL 2858

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +      P  +  L      +V CG     T  L  GG +Y+WG  
Sbjct: 2859 YTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDG 2918

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGW 373
            + G LG G  +   SP           VD++    +  V CG + + A++  G + TWG 
Sbjct: 2919 DFGKLGRGGSEGCSSP---------CLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGK 2969

Query: 374  GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G               +LGHG+D     PT+V      K + VS G  H  A+ +
Sbjct: 2970 GDYF------------RLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTD 3012



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG G + S   P    A     ++ +A G  H+  +T +G +Y  GL ++G+
Sbjct: 2809 WGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N+   L P R+  L  + VVQ+S G   +   A+   G +Y WG    G+LG G 
Sbjct: 2869 LGHGDNL-TQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG- 2926

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++    P  V+ LSG+       G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 2927 -GSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV-- 2983

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P L++ L G KV   + G LH   + + G+V+ +GD        Q+GN + 
Sbjct: 2984 -------RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHG----QQGNGSI 3032

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
               RRP+L+  +       V CG  H+   T+
Sbjct: 3033 TVNRRPTLVQGIDGIKITRVACGSSHSVAWTA 3064



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 167/378 (44%), Gaps = 52/378 (13%)

Query: 62   PVVCSAFEKHSLKALACGGAHTLFLTET------GCVYATGLNDFGQLGISENIGYSLEP 115
            PVV S   +H  + L    +H    T++      G +Y  G N  GQLG  E     +  
Sbjct: 3582 PVVFS--HEHDQQLLQWMNSHPEDWTQSWTAVGGGQIYGWGHNHRGQLGGVEGAKVKVPT 3639

Query: 116  L--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            +   +S L+   +Q++ G     AIT DG +Y  G  + G+  LG   A+ + +P+ +E 
Sbjct: 3640 VCEALSALRP--IQLAGGEQTLFAITSDGRVYATGYGAGGR--LGIGGAESVTVPSLLES 3695

Query: 174  LSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L  +F K+ A+  G +  +A++  G+V SWG G  G+LGHG +              PR+
Sbjct: 3696 LQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPC---------DRPRI 3746

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
            I+ L G  V   A G  HSA I   G +Y +G     ++   + +   +P L+  L    
Sbjct: 3747 IESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYR 3806

Query: 290  SEEVVCGG--YHTCVLTS--GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +V CG     TC +T   GG +++WG  + G LG G  D    P +++          
Sbjct: 3807 VMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSG------ 3860

Query: 346  ICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
                I+ V CG + + A+S  G + TWG G  H            +LGHG D     P  
Sbjct: 3861 --LGIIKVECGSQFSVALSNNGSVYTWGKGDYH------------RLGHGVDEHVRRPKK 3906

Query: 405  VNFGENVKALQVSCGFNH 422
            V   +  K + +S G  H
Sbjct: 3907 VMTLQGKKVISISTGALH 3924



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 131/290 (45%), Gaps = 32/290 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G++Y WG N  GQLG G + AKV  +PT  E LS +   Q A G +   A+T  G+V + 
Sbjct: 3614 GQIYGWGHNHRGQLG-GVEGAKV-KVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYAT 3671

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+           P L++ L+ V VK  A  +G  H   +   G V
Sbjct: 3672 GYGAGGRLGIGGAESV---------TVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEV 3722

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP +I  L   +  +V CGG H+  +T+ GELYTWG    
Sbjct: 3723 YSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRY 3782

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT-WGWGGS 376
            G LG G  D    P+ V+       +D  C S      G   T AI++ +  T W WG  
Sbjct: 3783 GRLGHGDSDDQLKPKLVEALLGYRVMDVACGS------GDAQTCAITDEEGGTVWSWG-- 3834

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  DG    G+LG G       PT +     +  ++V CG   + AL
Sbjct: 3835 ------DGDY--GKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVAL 3876



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 132/297 (44%), Gaps = 36/297 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S+++    +Y+WG N   QLG G K +K I +P  V+    +     A G +    VT  
Sbjct: 2692 SSVSGAKRVYVWGLNDKEQLG-GPKGSK-IKVPQAVDWTVSLQPISVAGGSKSLFLVTQS 2749

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAA-AGFLHSACI 253
            GK  + G G +GRLG G   ++          +P  I  L + V  K+A  +G  H+  +
Sbjct: 2750 GKAYACGEGSNGRLGLGHSRNV---------NSPHQITALSQHVVRKVAVHSGGRHALAL 2800

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYT 311
              +GRV+ +G+    K+   +      P  I  L      +V  G  H+  +TS GELYT
Sbjct: 2801 TADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYT 2860

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISEGKIL 369
            WG  E G LG G      +P+RV     ES V Q    +V VSCG +   T A+ EG  L
Sbjct: 2861 WGLGEYGRLGHGDNLTQLTPKRV-----ESLVGQ---RVVQVSCGSRDAQTLALVEGG-L 2911

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             + WG   G F        G+LG G       P +V+    +    V CG   + AL
Sbjct: 2912 VYSWGD--GDF--------GKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVAL 2958



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 42/296 (14%)

Query: 144  LYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            + + G+N    L L   AA  +++P   + E     F K      +   +V+G  +V  W
Sbjct: 2644 IQLVGRNVGNSLPLDDSAALARLLPPDFEFEQGDSAFNKSQQSVIQPISSVSGAKRVYVW 2703

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G     +LG  + S I           P+ +     ++    A G      + ++G+ Y 
Sbjct: 2704 GLNDKEQLGGPKGSKI---------KVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYA 2754

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYTWGSN 315
             G+ +  ++      +   P  I+ L  S+ VV       GG H   LT+ G +++WG  
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITAL--SQHVVRKVAVHSGGRHALALTADGRVFSWGEG 2812

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
            ++G LG G +  L +P  ++        D        V+ G  H+AA+ S G++ TWG G
Sbjct: 2813 DDGKLGHGDVTSLDTPRCIEALNGFRVRD--------VAAGSNHSAAVTSSGELYTWGLG 2864

Query: 375  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN--HTGALLE 428
                          G+LGHG+++  + P  V      + +QVSCG     T AL+E
Sbjct: 2865 ------------EYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVE 2908


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 176/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V++I       
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI------- 591

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  ++P  V     E+  D+   S+V   CG   TAAI
Sbjct: 623 TDDKNTPTLV-----EALKDKQVRSVV---CGINFTAAI 653



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVES----- 466

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 467 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 511

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+      PT V         QV+CG   T AL
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 421 SSI-------SCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVP 461

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 462 REVESLKGLRTVRAACGVWHTAAVVEVM 489


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 176/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V++I       
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI------- 591

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  ++P  V     E+  D+   S+V   CG   TAAI
Sbjct: 623 TDDKNTPTLV-----EALKDKQVRSVV---CGINFTAAI 653



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVES----- 466

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 467 -LKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------ 511

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+      PT V         QV+CG   T AL
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 421 SSI-------SCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVP 461

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 462 REVESLKGLRTVRAACGVWHTAAVVEVM 489


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 60/344 (17%)

Query: 43  WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG     RLG  G+ +   +P +   FE  +++ +ACGG HTL L E GC+++ G N +G
Sbjct: 15  WGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYG 74

Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG    +   L+  R IS L  +++ ++ G +HS+A+ V+G ++ WG   NG+LG   +
Sbjct: 75  QLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDE 134

Query: 161 AAKVIP-----IPT--KVEC---------LSGIFT------------------------- 179
             + IP     +P   K+ C           G++T                         
Sbjct: 135 QTRTIPCRITHLPRAHKIFCGYHITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIF 194

Query: 180 -------KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
                   Q A G    +  T  G V +WG+   G+LG G+ + I          +P L+
Sbjct: 195 DDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYS--------SPVLL 246

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYS 290
             L G+ V   AAG  HSA +   G ++ +G  A  +    + N    P L+  L   + 
Sbjct: 247 TSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFI 306

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            +V CG   T  L+   ++Y +G+N  G LG GS     +P ++
Sbjct: 307 LKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKL 350



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 140/312 (44%), Gaps = 48/312 (15%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           + Q++ G  H+  +  DG L+ +G N  GQLG G K    +     +  LS       A 
Sbjct: 46  IQQVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIA-VAC 104

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   S A+   G V +WG G +GRLGH  E +     R T  + PR  K   G  +  A 
Sbjct: 105 GRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRIT--HLPRAHKIFCGYHITAAI 162

Query: 245 AGF-LHSACIDENGRV---YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
               L++    E+G++    +       K++F + N A     IS+L       CG  H 
Sbjct: 163 TDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLA-----ISQL------ACGDRHC 211

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSC 355
            V T  G++YTWGSNE G LGIG  + ++S          SPV  + TS     +  V+ 
Sbjct: 212 LVRTESGDVYTWGSNEFGQLGIGRYNEIYS----------SPV--LLTSLAGMMVTFVAA 259

Query: 356 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G +H+AA++  G + TWG G              GQ GHG+  D   P +V     V  L
Sbjct: 260 GDRHSAAVTNTGSLFTWGCGAE------------GQCGHGDYNDCDMPFLVESLVGVFIL 307

Query: 415 QVSCGFNHTGAL 426
           +V CG N T AL
Sbjct: 308 KVFCGHNFTVAL 319


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 184/400 (46%), Gaps = 48/400 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG G  GRLG G       P   ++F  ++ +  +ACG  H+L  +  G VYA G  D G
Sbjct: 1184 WGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRG 1243

Query: 102  QLGISEN-----IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            QLG  EN     I Y+  P  +  LK+  ++ I+ G  H+  +T + ++  WG    GQL
Sbjct: 1244 QLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQL 1303

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            GL    +K    P  V+ L G    +   G   S A+   GK+L WG    G+LGHG   
Sbjct: 1304 GLDHNLSK--GTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTK 1361

Query: 216  SILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
            S            PR+ +   LEG KV+ A  G  H+  +    +V+  G     ++   
Sbjct: 1362 SC---------SAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLD 1411

Query: 274  EGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
            + +   +  P  I +L      +V  G  H+  L+  GE+++WG +  G LG  +I    
Sbjct: 1412 DPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKL 1471

Query: 330  SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 388
            +P     P  E    +I   +  ++CG+  +AA+S +G++ TWG G S            
Sbjct: 1472 APT----PLLER--HKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGES------------ 1513

Query: 389  GQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHTGALL 427
            G+LGH   V    P+++ +F E V   Q++CGF H   ++
Sbjct: 1514 GELGHAPKVLTYAPSLIKDFSEVV---QIACGFKHMAGIV 1550



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 30/330 (9%)

Query: 4   RSLTAMTKYY--LKQDIKLGSKLGICKRWISST--LQRRFAALWGNGDYGRLGLGSLESR 59
           R    +T Y   L ++   G    + KR+I     LQ     +WG+G+ G+LG  S E +
Sbjct: 52  REAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGKLGNQSEEIQ 111

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEP 115
             P +  AF    +K  A G  HTLFL+  G V + G N +GQLG+ +++        EP
Sbjct: 112 HVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEP 171

Query: 116 LRISGLKK---------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            +   L K          +V I+ GY+HS A+   G+++ WG  S G+LG+G  A     
Sbjct: 172 SKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANA--E 229

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
            P  V  L        A G   + A+T  G V +WG G  G+LGH              E
Sbjct: 230 SPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKS---------VKEE 280

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           ++PRL   L     +    G  H+  I  +G++Y  G     ++   +      P+L++ 
Sbjct: 281 FSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTG 340

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
               +  ++   G  +  LT+ G+++ +G+
Sbjct: 341 FANEKVIDIDAKGCRSIALTNTGKVFAFGN 370



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 23/279 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
            G  ++GRLGLG +     PV   +     +  +ACG  H L LTE   VYA G   +G  
Sbjct: 1668 GGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 104  GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            G+S N    LEP  +S L    ++ +  G  HS+A++  G+L+MWGKNSNGQLGLG  +A
Sbjct: 1728 GVS-NTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA 1786

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 PTK+  L G+     +LG   S  +       + + G   +G+LG       LG 
Sbjct: 1787 -AEDSPTKISNLDGVVM-DVSLGANHSAVLMQVTSPNLFTCGLNANGQLG-------LGD 1837

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG----- 275
                S  T   +  L+  ++  A+ G  H+A + + G +  +G+    ++  + G     
Sbjct: 1838 FVDRSTLTA--VDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDI 1895

Query: 276  -NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             N  + P++ +  P   +VVCG   T V++  GELY  G
Sbjct: 1896 ENPVQLPAICND-PMV-KVVCGQEVTIVVSEKGELYMAG 1932



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 15/278 (5%)

Query: 27   CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
            C RW + TL      L WG G++G+LGL    S+  P +  A +  +   + CGG H+  
Sbjct: 1278 CGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAA 1337

Query: 86   LTETGCVYATGLNDFGQLGISENIGYSL----EPLRISGLKKEVVQISTGYHHSSAITVD 141
            + E+G +   G N +GQLG  +    S     + LR+ G   +V     G +H+  + V 
Sbjct: 1338 ILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEG---KVRTAGLGANHTLVVMVA 1394

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
             +++  G N +GQLGL   +     +P  +E L+G    Q A G + S+A++  G+V SW
Sbjct: 1395 NKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSW 1454

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G    G+LGH   +  L         TP L +      VK  A G+  SA +   G V+ 
Sbjct: 1455 GGSPFGQLGHETITDKLA-------PTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFT 1507

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
            +G+    ++          PSLI       ++ CG  H
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKH 1545



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 41/302 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++MWG   NG+LG   ++ ++  +P  V     +  K  ALG + ++ ++  G VLS G+
Sbjct: 92  VFMWGDGENGKLG--NQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--------AAGFLHSACIDE 255
              G+LG G         RST    P   K L+ ++  I         AAG+ HS  +++
Sbjct: 150 NVYGQLGMGDHM----LSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            G+++ +G  +  K+      +A  P  ++ L  S+   + CG +HT  +T+ G+++TWG
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWG 265

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
               G LG  S+    SP R+     +    +I        CG  HT  I          
Sbjct: 266 KGLRGQLGHKSVKEEFSP-RLNASLRKCGAQKI-------RCGDDHTLVILRS------- 310

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV------SCGFNHTGALL 427
               G     G ++ GQLG G+  D I PT+V    N K + +      S    +TG + 
Sbjct: 311 ----GQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVF 366

Query: 428 EY 429
            +
Sbjct: 367 AF 368



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 15/294 (5%)

Query: 43  WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +G G +GRLG G     S ES   P       K S+  +ACG   T  LT+TG VY  G 
Sbjct: 520 YGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGK 579

Query: 98  NDFGQLGISENIGYSL-EPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
           +  G+LG+      ++  P  +  L   VV QIS G +H++  T   + ++WG N+ GQL
Sbjct: 580 SAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQL 639

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G+    +  +P P ++  L     +  A G   ++  T  G V+S G G  G+LGHG   
Sbjct: 640 GI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYE 698

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           S+   L  T  Y  ++++      +   +AG   SA I   GR++ +G +  +  L  E 
Sbjct: 699 SLTA-LSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWG-KGDEYQLGHES 756

Query: 276 N----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +    + R     +K+    +V  G  H   L   G  Y+WG+   G LG G +
Sbjct: 757 SKNEAYPREVEFFAKIRVV-DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEM 809



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 28/294 (9%)

Query: 141 DGELYMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           DG +Y +GK   G+LG G    ++ + +  P ++E L+ +     A G + + A+T  GK
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V +WG    G+LG       LG  +  +   P+L+++L    V   + G  H+AC  +  
Sbjct: 574 VYTWGKSAQGKLG-------LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH 626

Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           + +++G     ++ +    ++   P  I+ L  +    + CGG+HT + T+ G + + G 
Sbjct: 627 KFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAIS-EGKILTWG 372
             +G LG G  + L +  +   P+ +  V+    S IV VS G + +AAI+ +G++ TWG
Sbjct: 687 GWHGQLGHGDYESLTALSKTL-PYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWG 745

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G  +            QLGH +  +  +P  V F   ++ + VS G +H  AL
Sbjct: 746 KGDEY------------QLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLAL 787



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 167/401 (41%), Gaps = 51/401 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT---LFLTETGCVYATGLND 99
            WGNG+ G LG       + P +   F +  +  +ACG  H    +F      +  TG ++
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSE--VVQIACGFKHMAGIVFKPRMKTIELTGSSN 1565

Query: 100  FGQLGISENIGYSLEPLRISG----LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
             G    S     S+    +SG             T    +S     G +++WG+++ GQL
Sbjct: 1566 IGD--NSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQL 1623

Query: 156  GL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            G+ G +AA+    P+ ++ L        +   + S  VT  G +   G    GRLG G  
Sbjct: 1624 GIRGLQAARS---PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHM 1680

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            +            TP  I+ L  VK+   A G  H   + E  RVY +GD          
Sbjct: 1681 APAP---------TPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN 1731

Query: 275  GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SP 331
             N    P  +S L       V  GG+H+  L+  G+L+ WG N NG LG+G+      SP
Sbjct: 1732 TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSP 1791

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAA---ISEGKILTWGWGGSHGTFSEDGHSSG 388
             ++      S +D +   ++ VS G  H+A    ++   + T G             ++ 
Sbjct: 1792 TKI------SNLDGV---VMDVSLGANHSAVLMQVTSPNLFTCGL------------NAN 1830

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
            GQLG G+ VD    T V+  ++ + +  SCG  HT A+ +Y
Sbjct: 1831 GQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQY 1871



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 157/351 (44%), Gaps = 48/351 (13%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGK 149
            +Y  G    G+LG   + GYS  P  I+      ++V+++ G  HS A + DG +Y WG 
Sbjct: 1181 IYTWGCGVNGRLGHGFHTGYST-PQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGA 1239

Query: 150  NSNGQLGLGKKAAKVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
               GQLG   +    + I     P  V  L   F    A G   ++ +T   +VLSWGAG
Sbjct: 1240 GDRGQLG-SLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAG 1298

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFG 263
              G+         LG   + S+ TP+++K L+G    KI   G+ HSA I E+G++ ++G
Sbjct: 1299 EFGQ---------LGLDHNLSKGTPQMVKALDGRAPCKILCGGW-HSAAILESGKILLWG 1348

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY---HTCVLTSGGELYTWGSNENGCL 320
                 ++   +      P +   L    +V   G    HT V+    +++  GSN +G L
Sbjct: 1349 KNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQL 1408

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
            G      L  P R       S  +    +I  V+ G +H+ A+S  G++  W WGG    
Sbjct: 1409 G------LDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEV--WSWGG---- 1456

Query: 380  FSEDGHSSGGQLGHGNDVDYIHPTIV----NFGENVKALQVSCGFNHTGAL 426
                  S  GQLGH    D + PT +        +VK+  ++CG+  + A+
Sbjct: 1457 ------SPFGQLGHETITDKLAPTPLLERHKIPPDVKS--IACGYTFSAAM 1499



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 162/347 (46%), Gaps = 35/347 (10%)

Query: 31   ISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
             S++ Q+R   +  WG    G+LG+  L++   P +  +    S+  ++     + F+T+
Sbjct: 1601 FSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTD 1660

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G +Y +G ++ G+LG+  ++  +  P+ I  L   ++++++ G +H  A+T +  +Y W
Sbjct: 1661 SGSLYVSGGSEHGRLGLG-HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
            G    G  G+       +  P ++  L+         G   S A++  G +  WG   +G
Sbjct: 1720 GDGKWGNAGVSN--TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNG 1777

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDR 265
            +LG G  S+        +E +P  I  L+GV + + + G  HSA + +  +  ++  G  
Sbjct: 1778 QLGLGTTSA--------AEDSPTKISNLDGVVMDV-SLGANHSAVLMQVTSPNLFTCGLN 1828

Query: 266  AVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
            A  ++    G+   R +L +     +  +    CG  HT  ++  G+L TWG+  NG LG
Sbjct: 1829 ANGQLGL--GDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLG 1886

Query: 322  I--GSIDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAISE 365
            +  G    + +P  VQ P        IC   +V V CG + T  +SE
Sbjct: 1887 LKAGLSKDIENP--VQLP-------AICNDPMVKVVCGQEVTIVVSE 1924



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 29/283 (10%)

Query: 92  VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGK 149
           V+  G  + G+LG  SE I +   P  +   +  +V++ + G  H+  ++ DG +   G 
Sbjct: 92  VFMWGDGENGKLGNQSEEIQHV--PYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149

Query: 150 NSNGQLGLGKKA-AKVIPI--PTKVECLSGIFTKQAAL--------GFEQSVAVTGGGKV 198
           N  GQLG+G    ++  P+  P+K + L  +     +L        G+  S+A+   GK+
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            SWG+G  G+LG G +++           +PR +  L+  KV   A G  H+A I   G 
Sbjct: 210 FSWGSGSWGKLGIGSDAN---------AESPRFVASLQNSKVVHIACGAHHTAAITTVGD 260

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ +G     ++  +       P L + L    ++++ CG  HT V+   G+LY+ G+N 
Sbjct: 261 VWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANT 320

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVD---QICTSIVLVSCG 356
           +G LG+G       P  V G  +E  +D   + C SI L + G
Sbjct: 321 HGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTG 363



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 17/205 (8%)

Query: 18  IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKAL 76
           I LG     C    S+ + + F  +WG+  +G+LG+  + S    P   ++  + +++++
Sbjct: 612 ISLGRNHAAC----STDMHKFF--VWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSI 665

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--------VQI 128
           ACGG HTL  T TG V + G    GQLG  +    +     +   KK V        V++
Sbjct: 666 ACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKV 725

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G   S+AIT  G L+ WGK    QLG   +++K    P +VE  + I     ++G   
Sbjct: 726 SAGKESSAAITNKGRLFTWGKGDEYQLG--HESSKNEAYPREVEFFAKIRVVDVSIGDSH 783

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQ 213
            +A+   G   SWG G +G+LGHG+
Sbjct: 784 MLALDYSGLPYSWGNGSAGQLGHGE 808



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 34/285 (11%)

Query: 44  GNGDYGRLGLGS-LESRWRPVVCSAFEK------------HSLKALACGGAHTLFLTETG 90
           G+  YG+LG+G  + SR  PV   + +K            +++  +A G  H+L L +TG
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTG 207

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            +++ G   +G+LGI  +          S    +VV I+ G HH++AIT  G+++ WGK 
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQ  LG K+ K    P     L     ++   G + ++ +   G++ S GA   G+LG
Sbjct: 268 LRGQ--LGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLG 325

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G          +T    P L+      KV    A    S  +   G+V+ FG+      
Sbjct: 326 LGD---------ATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNET---- 372

Query: 271 LFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW 312
              E +  R P  ++ LP S+ ++      +    ++  G+L+ W
Sbjct: 373 ---EPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW 414



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 132/322 (40%), Gaps = 46/322 (14%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLE----PLRISGLKK-EVVQISTGYHHSSAITVDGEL 144
           G +Y  G   FG+LG       S E    P RI  L K  VV I+ G   ++A+T  G++
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y WGK++ G+LGLG      I +P  V+ LS     Q +LG   +   T   K   WG+ 
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSN 634

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG    SS +          P  I  L    ++  A G  H+      G V   G 
Sbjct: 635 TFGQLGIPHISSYMP--------DPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV------------CGGYHTCVLTSGGELYTW 312
               ++    G++    +L   LPY +++V             G   +  +T+ G L+TW
Sbjct: 687 GWHGQL--GHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTW 744

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G  +   LG  S      P  V+  F++         +V VS G  H  A+     L + 
Sbjct: 745 GKGDEYQLGHESSKNEAYPREVEF-FAK-------IRVVDVSIGDSHMLALDYSG-LPYS 795

Query: 373 WGGSHGTFSEDGHSSGGQLGHG 394
           W          G+ S GQLGHG
Sbjct: 796 W----------GNGSAGQLGHG 807



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 162/399 (40%), Gaps = 59/399 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG  S++  + P + ++  K   + + CG  HTL +  +G +Y+ G N  GQ
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +     + P  ++G   E V+ I      S A+T  G+++ +G  +   L    + 
Sbjct: 324 LGLGDATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRF 382

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +P   K + +  +  + A   F    A++  G++  W                    
Sbjct: 383 VAGLP---KSDLIIAV-ARTAHFDF----AISDTGQLFRWRP------------------ 416

Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSA--CIDENGRVYIFGDRAVDKMLFQEGNHA 278
            S+ E + R+++    +K V     G  H A  C  E G       R        + + A
Sbjct: 417 FSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRA 476

Query: 279 R---------RPSLISKLPYSEEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIGSIDVL 328
                      P+L +   Y +E             G G +YT+G    G LG G ++  
Sbjct: 477 SLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHG-VEYT 535

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 387
            S E V+ P     + ++  S+V ++CG   TAA+++ GK+ TW            G S+
Sbjct: 536 RSEESVKHPKRIETLAKM--SVVFIACGKDSTAALTDTGKVYTW------------GKSA 581

Query: 388 GGQ--LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G+  LG G  +  + P +V    +    Q+S G NH  
Sbjct: 582 QGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAA 620



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 45/250 (18%)

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           G  V  WG G +G+LG+  E           ++ P ++     V VK+ A G  H+  + 
Sbjct: 89  GSHVFMWGDGENGKLGNQSEEI---------QHVPYIVPAFRNVLVKVCALGKQHTLFLS 139

Query: 255 ENGRVY-----IFGDRAVDKMLFQEGNHARRPS----------LISKLPYSEEVVCGGYH 299
            +G V      ++G   +   +         PS          +I  L     +  G YH
Sbjct: 140 ADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYH 199

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L   G++++WGS   G LGIGS     SP  V    +        + +V ++CG  H
Sbjct: 200 SLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQN--------SKVVHIACGAHH 251

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           TAAI+  G + TWG G              GQLGH +  +   P +        A ++ C
Sbjct: 252 TAAITTVGDVWTWGKGLR------------GQLGHKSVKEEFSPRLNASLRKCGAQKIRC 299

Query: 419 GFNHTGALLE 428
           G +HT  +L 
Sbjct: 300 GDDHTLVILR 309



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 99/244 (40%), Gaps = 38/244 (15%)

Query: 190  VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFL 248
            V + G   + +WG G +GRLGHG           T   TP+ I       K+   A G  
Sbjct: 1173 VDLEGEYHIYTWGCGVNGRLGHGFH---------TGYSTPQEITSFPSNTKIVEVACGCE 1223

Query: 249  HSACIDENGRVYIF--GDR----AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHT 300
            HS     +G VY +  GDR    +++     + N+A  P  +  L   +   + CG +H 
Sbjct: 1224 HSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHN 1283

Query: 301  CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
              LTS  ++ +WG+ E G LG+       +P+ V+     +P   +C        GW   
Sbjct: 1284 MTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCG-------GWHSA 1336

Query: 361  AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE-NVKALQVSCG 419
            A +  GKIL W            G +  GQLGHG+      P +  +     K      G
Sbjct: 1337 AILESGKILLW------------GKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLG 1384

Query: 420  FNHT 423
             NHT
Sbjct: 1385 ANHT 1388



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)

Query: 281  PSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLG-IGSIDVLHSPERVQG 336
            P  I+  P +    EV CG  H+   +  G +Y WG+ + G LG + + D +    ++  
Sbjct: 1203 PQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCV----KINY 1258

Query: 337  PFSESPVDQICTSIVL-VSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
             F+  PV  +    +L ++CG W +    SE ++L+WG G              GQLG  
Sbjct: 1259 AFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAG------------EFGQLGLD 1306

Query: 395  NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +++    P +V   +     ++ CG  H+ A+LE
Sbjct: 1307 HNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE 1340


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 23/331 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DYG+LG    +   RP V +A +  S++ ++CG  H L + +   V++ G +D GQL
Sbjct: 59  GSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQL 116

Query: 104 GISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G +   G   S  P  +  L   ++VQ++ G  HS A++ DG ++ WG NS+GQLG+G  
Sbjct: 117 GHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIG-- 174

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + K  P P ++  L+GI   Q   G   S  ++  G V  +G    G+LG G        
Sbjct: 175 STKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD------- 227

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +     P  +K L  +KV   + G  H+A +  +G V  FG  +  ++     NH   
Sbjct: 228 --TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL 285

Query: 281 PSLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  + +L   E  ++ CG  HT   + S G +Y++G   NG LG       ++P  V GP
Sbjct: 286 PRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGP 345

Query: 338 FS----ESPVDQICTSIVLVSCGWKHTAAIS 364
           F     ++ +++ C  +  ++ G     A++
Sbjct: 346 FVPFAGDNSLEEQCYVVQAITAGGDQAFALA 376



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 34/345 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK-----HSLKALACGGAHTLFLTETGCVYATGL 97
           WG    G LGLG +E     V+ +  E+      +++ ++CG  HT+F+   G VY  G 
Sbjct: 4   WGAARNGELGLGGIEED---VILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           ND+GQLG  ++ G+   P  I+ L  + + Q+S G +H+  +    +++ WG +  GQLG
Sbjct: 61  NDYGQLG--QDKGHK-RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117

Query: 157 LGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
              +A       P  V+ LS +   Q A G + S+A++  G++ SWG    G+LG G   
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-- 175

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  + ++  P+ +  L G+      AG  HS  + ++G V+ FG     ++   + 
Sbjct: 176 -------TKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDT 228

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
              + P+ +  L   +   + CG  HT VLT  G + T+G+   G LG  S +    P +
Sbjct: 229 GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRK 288

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWGWGGS 376
           V         + +   +  ++CG  HT A  E  G+I ++G GG+
Sbjct: 289 V--------FELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGN 325



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 146/313 (46%), Gaps = 35/313 (11%)

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           G  K + ++S G  H+  +  +G +Y  G N  GQLG  K   +    PT +  L     
Sbjct: 31  GATKAMREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKR----PTVITALDTQSI 86

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +Q + G   ++ V    +V SWG    G+LGH  E+         +   PR++KEL  ++
Sbjct: 87  QQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAG------GNNSRRPRMVKELSSLQ 140

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCG 296
           +   A G  HS  +  +GR++ +G+ +  ++      +  +P  ++ L   P+ + +V G
Sbjct: 141 IVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQ-IVAG 199

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G H+ VL+  G ++ +G N  G LG+G       P  V+   S          +  +SCG
Sbjct: 200 GSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRS--------LKVTHISCG 251

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
            +HTA ++ +G +LT+G G            S GQLGH ++     P  V     ++  Q
Sbjct: 252 EEHTAVLTLDGGVLTFGAG------------SYGQLGHNSNNHEALPRKVFELMGLEVTQ 299

Query: 416 VSCGFNHTGALLE 428
           ++CG  HT A +E
Sbjct: 300 LACGRMHTMAYVE 312



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 35/288 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG   NG+LGLG     VI  P +    +    ++ + G + +V V   G V + G+
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG  +     G  R      P +I  L+   ++  + G  H+  +++  +V+ +G
Sbjct: 61  NDYGQLGQDK-----GHKR------PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109

Query: 264 DRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
                ++   L   GN++RRP ++ +L   +  +V CGG H+  L++ G +++WG+N +G
Sbjct: 110 YDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHG 169

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
            LGIGS      P+ +    +  P  QI         G  H+  +S+   + +G+G    
Sbjct: 170 QLGIGSTKNQPKPQELTS-LTGIPFCQIVA-------GGSHSFVLSKSGAV-FGFG--RN 218

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           TF        GQLG G+  D  +PT V    ++K   +SCG  HT  L
Sbjct: 219 TF--------GQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 5/170 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  +G+LG+GS +++ +P   ++        +  GG+H+  L+++G V+  G N FGQ
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQ 222

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +  G    P  +  L+  +V  IS G  H++ +T+DG +  +G  S GQLG     
Sbjct: 223 LGLGDT-GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG 210
            +   +P KV  L G+   Q A G   ++A V   G++ S+G GG+G+LG
Sbjct: 282 HEA--LPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 180/386 (46%), Gaps = 48/386 (12%)

Query: 50  RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
           R G G L    RP  V  + F K +    A  G       + +TG V+      FG+   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP  I       +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T+ GELYT+G  ENG LG+ +  +++  SP+RV G       
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG------- 278

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP 402
             I   ++ V+CG  HT  ++E  +  +G G              GQLG G  + +   P
Sbjct: 279 --IPDKVIQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEP 324

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
            I++  ++ K   +SCG NHT  + +
Sbjct: 325 KIIDRIKDQKISHISCGENHTALMTD 350



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K D+ +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +         IG+   P  I   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G     
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G+  S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285

Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
           +A  G  H+  + E   VY      FG   +   LF+       P +I ++   +   + 
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 158/356 (44%), Gaps = 50/356 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N+ GQLGLG    +            G FT     KQ + G   S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQLSAGANTS 190

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEVTV--GKPISWISCGYYH 239

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGGGHTVVLTE 298

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAIS 364
              +Y +G  + G LG+G+     S  ++        +D+I    I  +SCG  HTA ++
Sbjct: 299 K-VVYAFGLGQFGQLGLGTFLFETSEPKI--------IDRIKDQKISHISCGENHTALMT 349

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           + G + T+G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 350 DIGLMYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 109/259 (42%), Gaps = 52/259 (20%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G     PS I K     ++ 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT--PSDIIK-----QLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V           +   I  +S
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT----------VGKPISWIS 234

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENV 411
           CG+ H+A ++ +G++ T+G                G+LG  N   +++  P  V  G   
Sbjct: 235 CGYYHSAFVTTDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPD 281

Query: 412 KALQVSCGFNHTGALLEYV 430
           K +QV+CG  HT  L E V
Sbjct: 282 KVIQVACGGGHTVVLTEKV 300



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F K +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVF 402


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 176/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   S +P  I  L    ++ ++ G
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVACG 170

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +   G LG G   +  +P       L GI     + G   +
Sbjct: 171 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCGPWHT 229

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 230 ALVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVWH 280

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P   +V
Sbjct: 281 TAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNFCQV 338

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V++I       
Sbjct: 339 ACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADGM-LPVRVEGKLHKNFVEEI------- 390

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           SCG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +
Sbjct: 391 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDKNTPTLVEALKDKQ 438

Query: 413 ALQVSCGFNHTGAL 426
              V CG N T A+
Sbjct: 439 VRSVVCGINFTAAI 452



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 155/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 134 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 193

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P  ++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 194 GLLGHGNDVSHWV-PKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 252

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 253 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 310

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 311 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 361

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 362 YGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 421

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  ++P  V     E+  D+   S+V   CG   TAAI
Sbjct: 422 TDDKNTPTLV-----EALKDKQVRSVV---CGINFTAAI 452



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 100 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 150

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 151 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHV 210

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G  + +  P  V+      
Sbjct: 211 NGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVES----- 265

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 266 -LKGLRT--VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK------------ 310

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         QV+CG   T AL
Sbjct: 311 GRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVAL 348



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 160

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+ V GP     V
Sbjct: 161 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKHVNGPLEGIHV 219

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G G            S G LGHG+      P
Sbjct: 220 SSI-------SCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRESISVP 260

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 261 REVESLKGLRTVRAACGVWHTAAVVEVM 288


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 173/375 (46%), Gaps = 56/375 (14%)

Query: 43   WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            WG+  YG LG+G   ++     PV    + +  +  +ACG  H++ LT  G VY+ G N 
Sbjct: 818  WGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNH 876

Query: 100  FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            +GQLG     G +  P+ +  L  E +V +S G +HS AI+  G+L+ WG    GQLG G
Sbjct: 877  YGQLGTGRR-GQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHG 935

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              A      P  ++ L       A  G+  S+ +T  GKV ++G+G  G+LG+G  + I 
Sbjct: 936  --AIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKI- 992

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------------R 265
                 TS      + E     +K     + H+  + + GR+Y +G              R
Sbjct: 993  -----TSPVPVYGLPE----PIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKR 1043

Query: 266  AVDKMLFQEGNHAR----------------RPSLISKLPYSEEVV---CGGYHTCVLTSG 306
            A ++++  EG+ A                  P+L+     S ++    CG +H+ V+++ 
Sbjct: 1044 ARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTT 1103

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQICTS---IVLVSCGWKHTAA 362
            G+LYTWG N +G LG+  I     P   + GP S   VD   TS   I  V CG   T A
Sbjct: 1104 GQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPS-VIVDSSSTSGSLIKEVRCGADFTLA 1162

Query: 363  ISEGKILTWGWGGSH 377
            +     L WGWG +H
Sbjct: 1163 LDAANKL-WGWGSNH 1176



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 155/347 (44%), Gaps = 48/347 (13%)

Query: 107  ENIGYSLEPL-RISGLKKEVVQIST---GYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            E++ YS +P+  +S  + E+   S+   G+ H++ I  + +LY WG +S G LG+G    
Sbjct: 775  ESVSYSHQPISNVSDSENEIEHKSSLGAGWAHAAHIR-NHKLYTWGHSSYGCLGVGPHMT 833

Query: 163  KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K   P P        +   Q A G   S+A+T  G V SWG+   G+LG G+        
Sbjct: 834  KTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNHYGQLGTGR-------- 884

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            R  + Y P L+  L    +   +AG  HS  I  +G+++ +G     ++     +   +P
Sbjct: 885  RGQAPY-PMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKP 943

Query: 282  SLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             L+  L  +E ++   GGY H+ +LTS G+++T+GS   G LG GS   + SP  V G  
Sbjct: 944  KLLKSLE-NENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITSPVPVYG-- 1000

Query: 339  SESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ---LGHG 394
               P+  I T        + H  A+S+ G++ TWG       F             L  G
Sbjct: 1001 LPEPIKCIYT-------AYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEG 1053

Query: 395  NDVD--------------YIHPTIVNFGE-NVKALQVSCGFNHTGAL 426
            +  D              ++ PT+V+    +    Q+ CG +H+  +
Sbjct: 1054 DQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVI 1100



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 40/214 (18%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
            +G+G +G+LG GS      PV      +  +K +     H L L++ G +Y  G      
Sbjct: 976  FGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQVL 1034

Query: 97   ---------------LNDFGQLGISENIGYS-------LEPLRI--SGLKKEVVQISTGY 132
                           LN+  Q   +E    +       L P  +  S +  ++ Q+  G 
Sbjct: 1035 RFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGC 1094

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---------ECLSGIFTKQAA 183
            HHS+ I+  G+LY WG N +GQLG+     +++P  T V            SG   K+  
Sbjct: 1095 HHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVR 1154

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             G + ++A+    K+  WG+   G+LG   E  +
Sbjct: 1155 CGADFTLALDAANKLWGWGSNHEGQLGKIPEEDL 1188


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 43/367 (11%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+L  G  + +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPNQLLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV-----LVSCGW 357
           +T  G +YT+G   +G LG+G  +           F+   +  +C++ +     LV+CG 
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLEN-----------FTNHFIPTLCSNFLRFIVKLVACGG 358

Query: 358 KHTAAIS 364
            H    +
Sbjct: 359 CHMVVFA 365



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 154/316 (48%), Gaps = 43/316 (13%)

Query: 121 LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
            K +V V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKV 89

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKE 234
           K AA G   ++  T GG V + G    G+LG G         ++ F   TSE+       
Sbjct: 90  KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH------- 140

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
               K+K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + 
Sbjct: 141 ----KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLV 353
           CG YH+  +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQV 248

Query: 354 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVK 412
           +CG +HT  ++E  + T+G G              GQLG G  + +   P ++    +  
Sbjct: 249 ACGGEHTVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQT 296

Query: 413 ALQVSCGFNHTGALLE 428
              +SCG NHT  + +
Sbjct: 297 ISYISCGENHTALITD 312



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVT--IGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 558

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 168/392 (42%), Gaps = 40/392 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS  +R  PV  S     ++ A+A G +H+L LT  G V A G N+FGQ
Sbjct: 62  WGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAWGENNFGQ 121

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N+  S+ P+ ++      VV I+  + HS A+T  G +  WG N+ GQLG G   
Sbjct: 122 LGTGNNLNSSV-PITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGANNVGQLGNGNTF 180

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V    G      A G   S+A+T  G  L+WG            +  LG  
Sbjct: 181 NSNTPV--TVNLPPGTTVATIAAGTNHSLAITSTGAALAWGG---------NGNGQLGNN 229

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
            + +   P  +       +   AAG  +S  I   G    +G  +  ++    GN+A   
Sbjct: 230 STATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQL--GTGNNADSL 287

Query: 281 -PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  ++  P +    +  G  H+  +TS G    WG N  G LGIG+     +P  V  P
Sbjct: 288 IPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVIVNLP 347

Query: 338 FSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                     T+I     G+ H+  ++S G  L WG       FS       GQLG GN+
Sbjct: 348 PD--------TTITTNDGGFFHSLGSMSTGAALAWG-----NNFS-------GQLGTGNN 387

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            + + P  V      K   ++ G  H+ AL+ 
Sbjct: 388 TNSLDPIAVALPSGTKITTIAAGGGHSLALVA 419



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 98/273 (35%), Gaps = 60/273 (21%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            +L+WGA   G+LG G          + +   P  +       V   A G  HS  +   
Sbjct: 58  TILAWGANNVGQLGDGS---------TIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSA 108

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY--HTCVLTSGGELYTWGS 314
           G V  +G+    ++      ++  P  ++  P +  V       H+  LTS G +  WG+
Sbjct: 109 GAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGA 168

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW-- 371
           N  G LG G+    ++P  V  P          T++  ++ G  H+ AI S G  L W  
Sbjct: 169 NNVGQLGNGNTFNSNTPVTVNLPPG--------TTVATIAAGTNHSLAITSTGAALAWGG 220

Query: 372 -------------------------------GWGGSH-------GTFSEDGHSSGGQLGH 393
                                            G S+       GT    G +S GQLG 
Sbjct: 221 NGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLGT 280

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GN+ D + P  V          ++ GF H+ A+
Sbjct: 281 GNNADSLIPIAVALPPGTTITSIAAGFTHSLAV 313


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 180/386 (46%), Gaps = 48/386 (12%)

Query: 50  RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
           R G G L    RP  V  + F K +    A  G       + +TG V+      FG+   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP  I       +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T+ GELYT+G  ENG LG+ +  +++  SP+RV G       
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG------- 278

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP 402
             I   ++ V+CG  HT  ++E  +  +G G              GQLG G  + +   P
Sbjct: 279 --IPDKVIQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEP 324

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
            I++  ++ K   +SCG NHT  + +
Sbjct: 325 KIIDRIKDQKISHISCGENHTALMTD 350



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K D+ +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +         IG+   P  I   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G     
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G+  S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285

Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
           +A  G  H+  + E   VY      FG   +   LF+       P +I ++   +   + 
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 161/367 (43%), Gaps = 50/367 (13%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+      L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+
Sbjct: 70  FKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVK 128

Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
           ++  G +H+   T  G +Y  G N+ GQLGLG    +            G FT     KQ
Sbjct: 129 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQ 182

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S A+T  GK+  WG    G++G   +S++           P  +    G  + 
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEVTV--GKPIS 231

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGG 297
             + G+ HSA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG
Sbjct: 232 WISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGG 290

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVLVSCG 356
            HT VLT    +Y +G  + G LG+G+     S  ++        +D+I    I  +SCG
Sbjct: 291 GHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKI--------IDRIKDQKISHISCG 341

Query: 357 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             HTA +++ G + T+G  G HG            LG  N  +   PT+ +         
Sbjct: 342 ENHTALMTDIGLMYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLKFTVQL 391

Query: 416 VSCGFNH 422
           ++CG  H
Sbjct: 392 IACGGCH 398



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 109/259 (42%), Gaps = 52/259 (20%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G     PS I K     ++ 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT--PSDIIK-----QLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V           +   I  +S
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT----------VGKPISWIS 234

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENV 411
           CG+ H+A ++ +G++ T+G                G+LG  N   +++  P  V  G   
Sbjct: 235 CGYYHSAFVTTDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPD 281

Query: 412 KALQVSCGFNHTGALLEYV 430
           K +QV+CG  HT  L E V
Sbjct: 282 KVIQVACGGGHTVVLTEKV 300



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F K +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVF 402


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 169/385 (43%), Gaps = 51/385 (13%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG G+  +   PV   A        LA G  H L ++  G V++ G N  GQ
Sbjct: 726  WGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ 783

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG  E       P  ++G  + +  ++ G   S A++ DG ++ WG N +GQLG G   A
Sbjct: 784  LGY-EGSATQTSPRWLTG-PECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P   +V  L+ +    A  G + ++AV   G V +WGA GSG+LG G          
Sbjct: 842  RTAP--ARVPGLAHVVAIAA--GSDHALAVRADGTVWAWGANGSGQLGDGT--------- 888

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +TS   P  +KEL  V V   A G  HS  +  +G V+ +G     ++          P 
Sbjct: 889  TTSRAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPV 946

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +S L   + +  G  H+  L  GG ++ WG+N +G LG G+      P +V G      
Sbjct: 947  FVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSG------ 1000

Query: 343  VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN----DVD 398
                 + +  +  G   + A++ GK+ +W            G++S GQLG G        
Sbjct: 1001 ----LSGVQGLVAGASFSLALTPGKVWSW------------GNNSAGQLGDGTLNSRSQP 1044

Query: 399  YIHPTIVNFGENVKALQVSCGFNHT 423
               PT+ +F      + +S G  HT
Sbjct: 1045 GAGPTLSSF------VALSAGAQHT 1063



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 171/377 (45%), Gaps = 67/377 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET---GCVYATGLND 99
           WG    G+LG G+L+SR  PV  S      + ALA GG+H++  + T   G V+A G N 
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLT--GIVALAGGGSHSVAASSTTLGGKVWAWGDNT 277

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +GQLG   ++  SL PL + GL  +VV +++G  HS A+  D  ++ WG N+  Q     
Sbjct: 278 YGQLGNGGDV-SSLLPLEVPGLT-QVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTG 335

Query: 160 KAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--S 216
            + + +P+      +SG+   QA A G   S+   G    L WGA GSG+LG+G  S  +
Sbjct: 336 TSVQRVPV-----RVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRA 390

Query: 217 ILG------------------FLRST---------------------SEYTP-RLIKELE 236
           + G                  FLR                       S   P RL   L 
Sbjct: 391 LPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLT 450

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
            V+   A++   HS  +  +G V+ +GD A  ++    G     P+ +  +  + E+  G
Sbjct: 451 SVRALSASS--YHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPGVAGATEIAAG 508

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
            YH+  L S G ++TWG N  G LG G+          +GP + + V  +   I  V+ G
Sbjct: 509 TYHSLALRSDGTVWTWGDNSYGQLGAGATP--------RGPRAPAVVPGLAV-ITHVAAG 559

Query: 357 WKHTAAI-SEGKILTWG 372
             H+ A+ S G++  WG
Sbjct: 560 LFHSLALDSSGQVWAWG 576



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 174/387 (44%), Gaps = 44/387 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV        +L AL+  G+HT+ L  TG ++A G N  GQ
Sbjct: 626 WGENSNGQLGDGTTTAR--PVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRNVSGQ 683

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S  P R+    + V   ++G   + A+  DG ++ WG NS GQLG G  +A
Sbjct: 684 LGNGTLVSES-TPRRVPSFAR-VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSA 741

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P    V+ +    T   A G +  +AV+  G V S+G+   G+         LG+  
Sbjct: 742 SPVP----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ---------LGYEG 788

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S ++ +PR +   E   ++  AAG L S  +  +G V+ +GD    ++          P+
Sbjct: 789 SATQTSPRWLTGPE--CIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPA 846

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L +   +  G  H   + + G ++ WG+N +G LG G+      P +V        
Sbjct: 847 RVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQV-------- 898

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
             +    +V V+ G  H+ A+ ++G +  WG  GS            GQLG G       
Sbjct: 899 --KELVDVVAVAGGSGHSLAVRADGTVWAWGANGS------------GQLGDGTTTSRTL 944

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLE 428
           P  V+    V+A  ++ G  H+ AL E
Sbjct: 945 PVFVSTLSGVQA--IASGAQHSLALAE 969



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 180/422 (42%), Gaps = 72/422 (17%)

Query: 43  WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LG G+     R P V        +  +A G  H+L L  +G V+A G N +G
Sbjct: 524 WGDNSYGQLGAGATPRGPRAPAVVPGLAV--ITHVAAGLFHSLALDSSGQVWAWGDNVYG 581

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       ++ P R+SGL   +  I  G  +S A+  DG ++ WG+NSNGQLG G   
Sbjct: 582 QLGDGSTTSRNV-PGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTT 640

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG---QESS-- 216
           A+  P+P +V  L       +  G   +VA+   G + +WG   SG+LG+G    ES+  
Sbjct: 641 AR--PVPARV-SLPATLVALSTRG-SHTVALDTTGMLWAWGRNVSGQLGNGTLVSESTPR 696

Query: 217 -------ILGF---LRST------------------------SEYTPRLIKELEGVKVKI 242
                  + GF   LR+T                        +  +P  ++ +   +   
Sbjct: 697 RVPSFARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYPRTVP 756

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            A+G  H   +  +G V+ FG  +  ++ ++       P  ++     E V  G   +  
Sbjct: 757 LASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLA 816

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           L+  G ++ WG N +G LG G++    +P RV G             +V ++ G  H  A
Sbjct: 817 LSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPG----------LAHVVAIAAGSDHALA 866

Query: 363 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
           + ++G +  WG  GS            GQLG G       P  V   E V  + V+ G  
Sbjct: 867 VRADGTVWAWGANGS------------GQLGDGTTTSRAVPMQVK--ELVDVVAVAGGSG 912

Query: 422 HT 423
           H+
Sbjct: 913 HS 914



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 20/272 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG G++ +R  P          + A+A G  H L +   G V+A G N  GQ
Sbjct: 826  WGDNGSGQLGDGAVTARTAPARVPGLAH--VVAIAAGSDHALAVRADGTVWAWGANGSGQ 883

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       ++ P+++  L  +VV ++ G  HS A+  DG ++ WG N +GQLG G   +
Sbjct: 884  LGDGTTTSRAV-PMQVKELV-DVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTS 941

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + +P+   V  LSG+  +  A G + S+A+  GG V +WGA GSG+LG G          
Sbjct: 942  RTLPV--FVSTLSGV--QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGT--------- 988

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +TS   P  +  L GV+  +A A F   +     G+V+ +G+ +  ++     N   +P 
Sbjct: 989  TTSRTRPVQVSGLSGVQGLVAGASF---SLALTPGKVWSWGNNSAGQLGDGTLNSRSQPG 1045

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
                L     +  G  HT VL S     +WG+
Sbjct: 1046 AGPTLSSFVALSAGAQHTVVLRSDDSFLSWGT 1077



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 141/297 (47%), Gaps = 28/297 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G  +   R V         + A+A G  H+L L   G V+A G N  GQ
Sbjct: 122 WGTNTDGQLGDGVSQ---RSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAWGNNTTGQ 177

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +   S  P +++GL  EVV I+ G  HS A+  DG ++ WG N +GQLG G   +
Sbjct: 178 LGDGSSTSRS-TPAKVAGLT-EVVAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS 235

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILG 219
           +  P+  +V  L+GI     A G   SVA +    GGKV +WG    G+LG+G + S L 
Sbjct: 236 RSTPV--RVSGLTGIVAL--AGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGDVSSL- 290

Query: 220 FLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                      L  E+ G+   +A A+G  HS  +  +  V+ +GD A      Q G   
Sbjct: 291 -----------LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNA-QAQTAQTGTSV 338

Query: 279 RR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           +R P  +S +  ++ + CG   + V         WG+N +G LG GS  V   P RV
Sbjct: 339 QRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRV 395



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 138/302 (45%), Gaps = 33/302 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           LA G  H+L++T  G V+A G N  GQLG    + +S  P ++ GL   V  ++ G  HS
Sbjct: 53  LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHS-TPTQVVGLTG-VTAVAAGNTHS 110

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  +G ++ WG N++GQLG G     V   P +V  L+G+     A G   S+A+   
Sbjct: 111 MALREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGV--TAIAAGNLHSLALI-N 164

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG   +G+LG G          STS  TP  +  L   +V   AAG  HS  +  
Sbjct: 165 GAVWAWGNNTTGQLGDGS---------STSRSTPAKVAGL--TEVVAIAAGDFHSLALKR 213

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS---GGELYTW 312
           +G V+ +G     ++     +    P  +S L     +  GG H+   +S   GG+++ W
Sbjct: 214 DGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAW 273

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G N  G LG G       P  V G           T +V ++ G  H+ A+  G    W 
Sbjct: 274 GDNTYGQLGNGGDVSSLLPLEVPG----------LTQVVALASGTSHSLAL-RGDDSVWA 322

Query: 373 WG 374
           WG
Sbjct: 323 WG 324



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 135/304 (44%), Gaps = 45/304 (14%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +++ G +HS  +T  G ++ WG N+ GQLG G         PT+V  L+G+     A G 
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQH--STPTQVVGLTGV--TAVAAGN 107

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G V +WG    G+LG G           +    P  +  L GV     AAG
Sbjct: 108 THSMALREEGTVWTWGTNTDGQLGDGV----------SQRSVPAQVAGLTGVTA--IAAG 155

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            LHS  +  NG V+ +G+    ++          P+ ++ L     +  G +H+  L   
Sbjct: 156 NLHSLAL-INGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRD 214

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           G ++ WG N +G LG G++D   +P RV G           T IV ++ G  H+ A S  
Sbjct: 215 GTVWAWGGNYSGQLGDGTLDSRSTPVRVSG----------LTGIVALAGGGSHSVAASST 264

Query: 366 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              GK+  WG      T+        GQLG+G DV  + P  V     V AL  + G +H
Sbjct: 265 TLGGKVWAWG----DNTY--------GQLGNGGDVSSLLPLEVPGLTQVVAL--ASGTSH 310

Query: 423 TGAL 426
           + AL
Sbjct: 311 SLAL 314



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 11/95 (11%)

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           RR   IS       +  G  H+  +T  G ++ WG+N  G LG GS     +P +V G  
Sbjct: 39  RRAPAISVQGRPYRLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVG-- 96

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
                    T +  V+ G  H+ A+  EG + TWG
Sbjct: 97  --------LTGVTAVAAGNTHSMALREEGTVWTWG 123


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 153/330 (46%), Gaps = 35/330 (10%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      + V IS G  H++ +T +G+LYM+G N  GQLGLG 
Sbjct: 34  FGKSNFAENI-----PSKFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 88

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    +  PT V+ L    TK A  G   ++  T  G + + G  G G+LG G       
Sbjct: 89  K--NTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTT 146

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F    S +T +        K+K  AAG   SA + E+G+++++GD +  ++   +  +  
Sbjct: 147 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVS 198

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +        + CG YH+  +T  GELYT+G  ENG LG+        PE+++    
Sbjct: 199 VPCQVDVGKPISSISCGYYHSAFITGDGELYTFGEPENGKLGL-------LPEQLKNSRV 251

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             PV  I   +  V+CG +HT  ++E  + T+G G              GQLGHG  +  
Sbjct: 252 PQPVLGIMEKVNKVACGGEHTVVLTETGVYTFGLG------------QYGQLGHGTLLFK 299

Query: 400 IH-PTIVNFGENVKALQVSCGFNHTGALLE 428
              P  V      K   ++CG +HT  + E
Sbjct: 300 TSVPKSVKHLRKCKIRNITCGESHTAVIAE 329



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 45/333 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLGS  +  +P    A +    K   CG  HTL  TE G +YA G N  G
Sbjct: 75  MFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEG 134

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL 
Sbjct: 135 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 192

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K    + +P +V+    I +   + G+  S  +TG G++ ++G   +G+LG   E    
Sbjct: 193 DKT--YVSVPCQVDVGKPISS--ISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 245

Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIF-----GDRAVDKMLF 272
             L+++    P L I E    KV   A G  H+  + E G VY F     G      +LF
Sbjct: 246 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 298

Query: 273 QEG-----NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +        H R+  + +       + CG  HT V+   G ++T+G   +G LG+G    
Sbjct: 299 KTSVPKSVKHLRKCKIRN-------ITCGESHTAVIAENGLMFTFGDGRHGKLGLGE--- 348

Query: 328 LHSPERVQGPFSESPVDQICT-SIVLVSCGWKH 359
               E     F  +      + +++LV+CG  H
Sbjct: 349 ----ENFANQFDPALCSNFLSFTVLLVACGGCH 377



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 167/356 (46%), Gaps = 50/356 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
           ++CG  HT  +T  G +Y  G ND+GQLG+ S+N  +  +P  +  LK E  +++  G +
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVH--KPTCVKALKPEKTKLAVCGRN 114

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
           H+   T +G +Y  G N  GQLGLG    +     T    +S  FT     KQ A G   
Sbjct: 115 HTLVYTENGNMYAAGGNGEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 168

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S AVT  G++  WG    G++G   ++           Y     +   G  +   + G+ 
Sbjct: 169 SAAVTEDGQLFVWGDNSEGQIGLADKT-----------YVSVPCQVDVGKPISSISCGYY 217

Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
           HSA I  +G +Y FG+    K  +L ++  ++R P  ++  +    +V CGG HT VLT 
Sbjct: 218 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 277

Query: 306 GGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            G +YT+G  + G LG G++    S P+ V+         + C  I  ++CG  HTA I+
Sbjct: 278 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHL-------RKC-KIRNITCGESHTAVIA 328

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           E G + T+G  G HG            LG  N  +   P + +   +   L V+CG
Sbjct: 329 ENGLMFTFG-DGRHGKLG---------LGEENFANQFDPALCSNFLSFTVLLVACG 374


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 161/344 (46%), Gaps = 40/344 (11%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + E+G V+      FG+   +EN+     P +      + + IS G  H+S +T +G+LY
Sbjct: 8   VPESGAVFT-----FGKCKFAENV-----PSKFWFKNDKPLHISCGDEHTSVVTENGKLY 57

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLG G K A  +  PT V+ L     K AA G   ++  T  G V + G   
Sbjct: 58  MFGSNNWGQLGFGSKNA--VNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNS 115

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G         RST        K+    K+K  AAG   SA + E+G++ ++GD 
Sbjct: 116 EGQLGLGDTEE-----RSTFHLISFFTKQH---KIKQLAAGSYTSAVLTEDGQLVMWGDN 167

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +  ++   +  +   P  +        + CG YH+ ++T  GELYT+G  ENG LG+   
Sbjct: 168 SEGQIGLGDKAYVSVPHQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGL--- 224

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 385
               SP++++       V  I   +  V+CG  HT  ++EG + T+G G           
Sbjct: 225 ----SPKQLKNHKLPQLVSGISGKVSKVACGGGHTVVLAEGDVYTFGLG----------- 269

Query: 386 SSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              GQLGHG  V +   P  V+     K   ++CG NHT  + E
Sbjct: 270 -QYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITE 312



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 144/298 (48%), Gaps = 41/298 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LG GS  +  +P    A +   +K  ACG  HTL  TE G VYA G N  G
Sbjct: 58  MFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEG 117

Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+ +    S   L IS   K+  + Q++ G + S+ +T DG+L MWG NS GQ+GLG 
Sbjct: 118 QLGLGDTEERSTFHL-ISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGD 176

Query: 160 KAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           KA   +P    I   V C+S         G+  S  +T  G++ ++G   +G+LG     
Sbjct: 177 KAYVSVPHQVDIGKPVSCIS--------CGYYHSALITQDGELYTFGEPENGKLG----- 223

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
             L   +  +   P+L+  + G KV   A G  H+  + E G VY FG       L Q G
Sbjct: 224 --LSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLAE-GDVYTFG-------LGQYG 272

Query: 276 N--------HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                        P  +  L   +   + CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 273 QLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLG 330



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 142/290 (48%), Gaps = 20/290 (6%)

Query: 23  KLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACG 79
           KL  C R   +  T Q    A  GN + G+LGLG  E R    + S F K H +K LA G
Sbjct: 90  KLAACGRNHTLICTEQGNVYAAGGNSE-GQLGLGDTEERSTFHLISFFTKQHKIKQLAAG 148

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
              +  LTE G +   G N  GQ+G+ +    S+ P ++  + K V  IS GY+HS+ IT
Sbjct: 149 SYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSV-PHQVD-IGKPVSCISCGYYHSALIT 206

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DGELY +G+  NG+LGL  K  K   +P  V  +SG  +K A  G      V   G V 
Sbjct: 207 QDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGKVSKVACGGGH--TVVLAEGDVY 264

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           ++G G  G+LGHG       F+  TSE  P+ +  L   K+   A G  H+A I ENG +
Sbjct: 265 TFGLGQYGQLGHGT------FVFETSE--PKTVDHLGKHKICHIACGENHTALITENGLM 316

Query: 260 YIFGDRAVDKMLFQEGNHARR--PSLISKLPY--SEEVVCGGYHTCVLTS 305
           Y FGD    K+   E N+  +  P+L S         V CGG H  V  S
Sbjct: 317 YTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVFAS 366



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 149/315 (47%), Gaps = 37/315 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G +Y  G N++GQLG       + +P  +  LK E V+++  G +H
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVN-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G NS GQLGLG    +    +I   TK   +     KQ A G   S 
Sbjct: 99  TLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKI-----KQLAAGSYTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G+++ WG    G++G G ++ +           P  +    G  V   + G+ HS
Sbjct: 154 VLTEDGQLVMWGDNSEGQIGLGDKAYV---------SVPHQVDI--GKPVSCISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSG 306
           A I ++G +Y FG+    K+     Q  NH + P L+S +     +V CGG HT VL  G
Sbjct: 203 ALITQDGELYTFGEPENGKLGLSPKQLKNH-KLPQLVSGISGKVSKVACGGGHTVVLAEG 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-SIVLVSCGWKHTAAISE 365
            ++YT+G  + G LG G+  V  + E          VD +    I  ++CG  HTA I+E
Sbjct: 262 -DVYTFGLGQYGQLGHGTF-VFETSE-------PKTVDHLGKHKICHIACGENHTALITE 312

Query: 366 GKILTWGWGGSHGTF 380
             ++     G HG  
Sbjct: 313 NGLMYTFGDGRHGKL 327


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 157/358 (43%), Gaps = 34/358 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G LGLG +     P+      +    A + G   T  +   G ++  G N  GQ
Sbjct: 447 WGRNDFGELGLGVMVYITSPL--QTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQ 504

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P+++ G   +   +S G  H+ A+  DG L+ WG+N NGQLGLG    
Sbjct: 505 LGLGDTDDRHA-PVQVGG-DSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDD 562

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P +V   S   T  A  G+  ++AV   G + +WG     R  HGQ    LG   
Sbjct: 563 R--KTPERVGSDSDWATVSAGTGY--TLAVKDDGTLWAWG-----RNSHGQ----LGLGD 609

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++          +AG  H+  +  +G ++ +G  +  ++   + ++   P 
Sbjct: 610 TNNRDAP--VQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPE 667

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +        V  G  HT  + + G L+ WG N +G LG+G  D  H+PE+V G      
Sbjct: 668 QVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGGD----- 722

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQLGHGND 396
                +    V+ GW+HT AI     L WGWG    G  G    DG  +  Q+G  +D
Sbjct: 723 -----SDWAAVTAGWQHTLAIKNDGTL-WGWGLNLYGQLGLGDTDGRHAPMQVGSDSD 774



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 150/335 (44%), Gaps = 38/335 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGLG  E R  P    +       A++ GGA+TL + + G ++A G N FGQ
Sbjct: 147 WGQNNVGQLGLGDTEKRDTPAQVGS--DTDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQ 204

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P ++ G   + V +S G HH+ A+  DG L+ WG+N  GQLGLG    
Sbjct: 205 LGLGDTDDRHA-PEQV-GSDSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQLGLGGTTN 262

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P         G  +  A +  G   S+AV   G + SWG    G+LG G        
Sbjct: 263 RNAPEQV------GSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNVGQLGLG-------- 308

Query: 221 LRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                +   R   E  G     A  +AG LH+  +  +G ++ +G     ++   + ++ 
Sbjct: 309 -----DTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNR 363

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +        +  G  ++  + + G L++WG N+ G LG+G  D  H+PE+V G  
Sbjct: 364 DAPVQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDRHAPEQVGGGM 423

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
                         V+ G  HT  + ++G +  WG
Sbjct: 424 ----------EWAAVTAGMYHTLGVKADGTLRAWG 448



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 175/424 (41%), Gaps = 72/424 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGLG  ++R  PV   +   +   AL  G  ++L +   G +++ G NDFG+
Sbjct: 347 WGGNGFGQLGLGDTDNRDAPVQVGS--DNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGE 404

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P ++ G   E   ++ G +H+  +  DG L  WG+N  G+LGLG    
Sbjct: 405 LGLGDTDDRHA-PEQVGG-GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVY 462

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ--------- 213
              P+ T  E         A+ G  Q+ AV   G +  WG   SG+LG G          
Sbjct: 463 ITSPLQTVTEA----DWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQ 518

Query: 214 ----------------------ESSILGFLRSTS------EYTPRLIKELEGVKVKIA-- 243
                                 + ++ G+ ++ +      +   R   E  G     A  
Sbjct: 519 VGGDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATV 578

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           +AG  ++  + ++G ++ +G  +  ++   + N+   P  ++       V  G  HT  +
Sbjct: 579 SAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAVSAGSRHTLAV 638

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + G L+ WG N +G LG+G  D    PE+V             T    VS G  HT A+
Sbjct: 639 KNDGTLWAWGRNSDGQLGLGDTDNRDVPEQVGSD----------TDWAAVSTGSGHTLAV 688

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 422
                L W W          G +S GQLG G D D  H P  V  G +     V+ G+ H
Sbjct: 689 KTDGTL-WAW----------GRNSDGQLGLG-DTDERHAPEQV--GGDSDWAAVTAGWQH 734

Query: 423 TGAL 426
           T A+
Sbjct: 735 TLAI 738



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 155/365 (42%), Gaps = 53/365 (14%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
           V C+AF       LA GG HTL +   G ++A G N+ GQLG+ +       P ++ G  
Sbjct: 120 VECTAF-----PVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDT-PAQV-GSD 172

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            +   +S G  ++ A+  DG L+ WG+N  GQLGLG    +    P +V   S      A
Sbjct: 173 TDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDR--HAPEQVGSDSDWVAVSA 230

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI---KELEGVK 239
             G   ++A+   G + +WG    G+LG G          +T+   P  +    +  GV 
Sbjct: 231 --GRHHTLALKADGTLWAWGRNYFGQLGLGG---------TTNRNAPEQVGSHSDWAGV- 278

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
                 G  HS  + E+G ++ +G   V ++   +    RRP  +        V  G  H
Sbjct: 279 ----IGGDRHSLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLH 334

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           T  + + G L+ WG N  G LG+G  D   +P +V                  ++ G ++
Sbjct: 335 TLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAPVQVGSD----------NDWAALNAGQRY 384

Query: 360 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           + A+ ++G + +WGW            +  G+LG G+  D   P  V  G    A  V+ 
Sbjct: 385 SLAVKNDGSLWSWGW------------NDFGELGLGDTDDRHAPEQVGGGMEWAA--VTA 430

Query: 419 GFNHT 423
           G  HT
Sbjct: 431 GMYHT 435



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 28/298 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG  + R  P    +        ++ G  +TL + + G ++A G N  GQ
Sbjct: 547 WGQNYNGQLGLGDTDDRKTPERVGS--DSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQ 604

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P++++    +   +S G  H+ A+  DG L+ WG+NS+GQLGLG    
Sbjct: 605 LGLGDTNNRDA-PVQVAS-DNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDN 662

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +P         G  T  AA+  G   ++AV   G + +WG    G+LG          
Sbjct: 663 RDVPEQV------GSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLG---------- 706

Query: 221 LRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           L  T E   R   E  G     AA  AG+ H+  I  +G ++ +G     ++   + +  
Sbjct: 707 LGDTDE---RHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGR 763

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +        V  G YHT  +   G L  WG N  G LG  +      P+ V G
Sbjct: 764 HAPMQVGSDSDWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLGQRTY-RFDQPQEVPG 820



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
           ++E     + AAG +H+  +  +G ++ +G   V ++   +      P+ +        V
Sbjct: 119 DVECTAFPVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAAV 178

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
             GG +T  +   G L+ WG N  G LG+G  D  H+PE+V G  S+          V V
Sbjct: 179 SAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQV-GSDSD---------WVAV 228

Query: 354 SCGWKHTAAI-SEGKILTWG 372
           S G  HT A+ ++G +  WG
Sbjct: 229 SAGRHHTLALKADGTLWAWG 248


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 150/337 (44%), Gaps = 37/337 (10%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
           E  S   +A G  H+LFLT TG V+A G N  GQLG ++     L P R+  L +++V +
Sbjct: 64  EPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVL-EDIVSV 122

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            +G  HS A+  DG ++ WG NS+GQLG G    +    P +VE  + +     A G   
Sbjct: 123 VSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRA--EPQRVEGFTDVVA--VAAGDFH 178

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+ +   G V +WG    G+LG G   + L          P+ +  LEGV     AAGF 
Sbjct: 179 SLVLKSDGTVWAWGTNFHGQLGQGHTQTGL---------WPKPVPGLEGVVAL--AAGFD 227

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
            +  +  +G V  +G  +  ++          P  I  L     V  G YH   L   G 
Sbjct: 228 FTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGITSVAAGTYHAVALGKDGT 287

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
           ++TWGSN +G LG G+ +    P         +P+  +  +  + S      A +  G +
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVP---------APLPGVGGARAVASLDAGSLALLEGGDV 338

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           L W            G ++ GQLG G+  D   P++V
Sbjct: 339 LAW------------GANNSGQLGDGDTADRSTPSLV 363



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 177/388 (45%), Gaps = 45/388 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  +R  P      E   + A+A GG  +L L   G V+A G N  GQ
Sbjct: 841  WGENQRGQLGDGTTSARVAPGRVEGLE--GIVAVAGGGDTSLALRSDGTVWAWGANASGQ 898

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            +G    +   L P RI  L  +V+ I+ G  H+ A+  DG ++ WG N++GQLG G +  
Sbjct: 899  VG-DGTVEDRLTPRRIEALS-DVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP 956

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  +P +V+ L G+ +  A   F  S+AV   G   +WGA  SG+LG G          
Sbjct: 957  SL--LPARVKGLEGVGSVAAGRAF--SLAVRDDGTAWAWGANESGQLGDGSNQ------- 1005

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA---R 279
              S   P  +  ++G++    +AG  H+  + E+G V+ +GD  + ++   +G  A    
Sbjct: 1006 --SRRVPHRVASVKGLRA--VSAGAHHAMALGEDGAVWAWGDNTLGQL--GDGTSAFTVM 1059

Query: 280  RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P  +++L   E V  G   +  +   G  ++WGSNE G LG G      SP  V+   S
Sbjct: 1060 WPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGS 1119

Query: 340  ESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
            +        ++V V    +H  A+ ++G +  W            G ++ GQLG G    
Sbjct: 1120 K------ARTVVTVGAWGQHAVALMADGTLQAW------------GDNATGQLGDGTTTR 1161

Query: 399  YIHPTIVNFGENVKALQVSCGFNHTGAL 426
               P  +     V A  VS G  H+ AL
Sbjct: 1162 RSSPGEIRGVTRVTA--VSTGAWHSLAL 1187



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 166/398 (41%), Gaps = 52/398 (13%)

Query: 43   WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WG+ +YG+LG G    R  P  V     +  ++  +   G H + L   G + A G N  
Sbjct: 1092 WGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNAT 1151

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            GQLG       S  P  I G+ + V  +STG  HS A+ +DG ++ WG N  GQLG G  
Sbjct: 1152 GQLGDGTTTRRS-SPGEIRGVTR-VTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTT 1209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             A+ +P+P  V+ L  +    A  G   SVAV   G V +WG    G+LG G        
Sbjct: 1210 TARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTWGYNTFGQLGDGT------- 1258

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              S S   P  + +LEGV+      G  HS  +  +G V  +G  A  ++   +G+   R
Sbjct: 1259 --SESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQL--GDGSRTDR 1312

Query: 281  --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP- 337
              P  +  +    EV  G  HT  L   G ++TWG N +G LG G          V GP 
Sbjct: 1313 YTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDG----------VTGPR 1362

Query: 338  --FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                  PV  +  +  + +  W   A+  E    TW            G +S GQLG G+
Sbjct: 1363 MRLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTW------------GRNSHGQLGVGD 1410

Query: 396  DVDYIHPTIVNFGENVKAL----QVSCGFNHTGALLEY 429
            +     P  +     +K +      S      G L+ +
Sbjct: 1411 NAPRAEPQRMKLLSGLKVIAGGADTSLAMTQEGVLMSW 1448



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 175/435 (40%), Gaps = 94/435 (21%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P     F    + A+A G  H+L L   G V+A G N  GQ
Sbjct: 141 WGSNSSGQLGDGTTTDRAEPQRVEGFTD--VVAVAAGDFHSLVLKSDGTVWAWGTNFHGQ 198

Query: 103 LG-------------------ISENIGYS------------------------------L 113
           LG                   ++   G+                               L
Sbjct: 199 LGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRL 258

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P RI  L   +  ++ G +H+ A+  DG ++ WG NS+GQLG G    + +P P     
Sbjct: 259 SPERIPTLSG-ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP----- 312

Query: 174 LSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           L G+   +A    +  S+A+  GG VL+WGA  SG+LG G          +    TP L+
Sbjct: 313 LPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD---------TADRSTPSLV 363

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
            EL  V   +   G  H+  + ++G ++ +G     ++          P+ +  L     
Sbjct: 364 PELSAVTAVV--GGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTS 421

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           +  G +H+      G ++ WG N  G LG G++   H P RV G            S+  
Sbjct: 422 MATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPG----------LPSVRA 471

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           V+    H+ A++ +G + TW            G ++ GQLG G   D   P  V+   +V
Sbjct: 472 VAAAGHHSIAVAMDGTVWTW------------GRNAAGQLGDGTTRDRARPVAVSGLTSV 519

Query: 412 KALQVSCGFNHTGAL 426
             L ++ G +H  AL
Sbjct: 520 --LAIAAGGSHVLAL 532



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 166/387 (42%), Gaps = 43/387 (11%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG    G+LG       R  P      E   + ++  G AH+L L   G V+  G N  G
Sbjct: 90  WGGNSAGQLGGADTSFQRLSPARLPVLED--IVSVVSGDAHSLALGADGTVWTWGSNSSG 147

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       + EP R+ G   +VV ++ G  HS  +  DG ++ WG N +GQLG G   
Sbjct: 148 QLGDGTTTDRA-EPQRVEGF-TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQ 205

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             + P P  V  L G+    A  GF+ ++AV   G V SWGA   G+LG G         
Sbjct: 206 TGLWPKP--VPGLEGVVALAA--GFDFTLAVHADGAVSSWGANSFGQLGLGT-------- 253

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T   +P  I  L G+     AAG  H+  + ++G V+ +G  +  ++     N    P
Sbjct: 254 -FTQRLSPERIPTLSGITS--VAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVP 310

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + +  +  +  V      +  L  GG++  WG+N +G LG G      +P  V       
Sbjct: 311 APLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLV------- 363

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
           P     T++V    G +H  A+ +   L W WGG             GQLGHG    ++ 
Sbjct: 364 PELSAVTAVV---GGAQHALALRKDGTL-WAWGGGL----------AGQLGHGGSERHVV 409

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLE 428
           P  V    NV ++  + G  H+ A LE
Sbjct: 410 PATVMGLTNVTSM--ATGSFHSLAALE 434



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 189/475 (39%), Gaps = 120/475 (25%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R RPV  S     S+ A+A GG+H L L   G V+A G N  GQ
Sbjct: 491 WGRNAAGQLGDGTTRDRARPVAVSGLT--SVLAIAAGGSHVLALRSDGDVWAWGYNALGQ 548

Query: 103 LGISENIGYSLEPLRISGLKK--------------------------------------- 123
           LG   + G  L P+R+ GL                                         
Sbjct: 549 LGDGTS-GDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR 607

Query: 124 ----------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
                     ++  IS G  H+ A+  DG ++ WG N+ GQLG G    +  P+  +V  
Sbjct: 608 LSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPV--QVRN 665

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL--------------- 218
           L+GI       G   S+A+   G V +WG+ G G+LG G  +S +               
Sbjct: 666 LTGITAVSG--GRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALH 723

Query: 219 -GFLRSTSEYTPRLIK----------------------ELEGV-KVKIAAAGFLHSACID 254
            G L   + +  + ++                      ++ G+ +V+  AAG  H+  + 
Sbjct: 724 PGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIGRVERLAAGRAHALLVR 783

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
            +G V  +G  A  ++      H  R   +  +  +  V  GG H+ VL   G ++TWG 
Sbjct: 784 ADGSVVAWGANASGQLGDGGTTHGARAVTVRGVSCARSVASGGQHSLVLACDGTVWTWGE 843

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGW 373
           N+ G LG G+     +P RV+G             IV V+ G   + A+ S+G +  W  
Sbjct: 844 NQRGQLGDGTTSARVAPGRVEG----------LEGIVAVAGGGDTSLALRSDGTVWAW-- 891

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                     G ++ GQ+G G   D + P  +    +V  + ++ G +H  A+ E
Sbjct: 892 ----------GANASGQVGDGTVEDRLTPRRIEALSDV--MVIALGESHALAVGE 934



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 158/380 (41%), Gaps = 42/380 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P           +A+A   A +L L E G V A G N+ GQ
Sbjct: 291 WGSNSSGQLGDGTWNDRAVPAPLPGVG--GARAVASLDAGSLALLEGGDVLAWGANNSGQ 348

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +    S  P  +  L   V  +  G  H+ A+  DG L+ WG    GQLG G    
Sbjct: 349 LGDGDTADRS-TPSLVPELSA-VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSER 406

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V+P    V  L+ + +   A G   S+A    G V +WG    G+LG G          
Sbjct: 407 HVVP--ATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGT--------- 453

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T  + P  +  L  V+  +AAAG  HS  +  +G V+ +G  A  ++         RP 
Sbjct: 454 VTERHVPVRVPGLPSVRA-VAAAGH-HSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPV 511

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +  GG H   L S G+++ WG N  G LG G+     +P RV G    +P
Sbjct: 512 AVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPG---LAP 568

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           +  +              A  ++G + TWG G     F        GQLG G  V  + P
Sbjct: 569 IQSVAAGTYF------SMALANDGTVWTWGEG-----FE-------GQLGDGGGVQRLSP 610

Query: 403 TIVNFGENVKALQVSCGFNH 422
             V    +++   +S G  H
Sbjct: 611 VAVKGLSDIR--NISVGSAH 628



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 23/298 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+  +R  PV         + A+A GG H++ +   G V+  G N FGQ
Sbjct: 1196 WGANGFGQLGDGTTTARAVPVPVQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQ 1253

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG   +   +L P+++  L+  V  ++ G HHS A+  DG +  WG N++GQLG G +  
Sbjct: 1254 LGDGTSESRAL-PVQVHKLEG-VQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +++ + G+   +A  G   +VA+   G V +WG    G+LG G     +    
Sbjct: 1312 RYTPV--RLKDVDGLTEVRA--GAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRM---- 1363

Query: 223  STSEYTPRLI-KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   RL+ K + G+    A  AG  HS         + +G R     L    N  R 
Sbjct: 1364 -------RLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWG-RNSHGQLGVGDNAPRA 1415

Query: 281  PSLISKLPYSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
                 KL    +V+ GG  T + +T  G L +WGS+ +G LG+G +    SP RV  P
Sbjct: 1416 EPQRMKLLSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLLP 1473


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG GS   R  PV        S+   A    H+L L   G V+A G N++GQ
Sbjct: 110 WGFNGYGQLGDGSTTGRNTPVQVEGL--RSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQ 167

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P+R+ GL   VV IS+G+ +S A+  DG ++ WGKN  GQLG G    
Sbjct: 168 LGDGSKTDRHT-PVRVKGLDS-VVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQ 225

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +V+ L  +     A G   ++A+   G V SWG   +G+LG G +        
Sbjct: 226 SSAPV--QVQGLHSV--TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSD-------- 273

Query: 223 STSEYTPRLIKELEGVKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               YTP    ++EG    +   AGF HS  +  +G V+ +G+   ++  F     +  P
Sbjct: 274 -MDRYTP---VQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGF----GSSTP 325

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             + +L    ++  G  H+  + + G ++ WG N+NG LG G+     +P +VQG
Sbjct: 326 VQVQELDSVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKVQG 380



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 167/360 (46%), Gaps = 50/360 (13%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG GS      PV     + HS++A+A GG+H L +   G V+A G N +GQLG    
Sbjct: 66  GQLGNGSTTGSPAPVQVQ--DLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGST 123

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +  P+++ GL+  +V  +  Y HS A+  DG ++ WG+N  GQLG G K  +  P+ 
Sbjct: 124 TGRNT-PVQVEGLRS-IVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPV- 180

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
            +V+ L  +    +  G+  S+AV   G V +WG    G+LG+G          +T    
Sbjct: 181 -RVKGLDSVVAISSGFGY--SLAVKSDGTVWAWGKNEYGQLGNGS---------TTQSSA 228

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
           P  ++ L  V     A+G  H+  I  +G V+ +G     ++   +G+   R  P  +  
Sbjct: 229 PVQVQGLHSVTA--VASGDYHNLAIKRDGTVWSWGPNLAGQL--GDGSDMDRYTPVQVEG 284

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
              + +V  G  H+  L S G ++ WG+ +    G GS     +P +VQ           
Sbjct: 285 FSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGS----STPVQVQE---------- 330

Query: 347 CTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
             S+V ++ G +H+ A+ ++G +  W W          G +  GQLG G     + P  V
Sbjct: 331 LDSVVDIAAGTQHSLAVRNDGTV--WAW----------GKNDNGQLGDGTSTARLTPIKV 378



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 149/323 (46%), Gaps = 31/323 (9%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG 110
           L L ++      VV +      ++  A G +HTL L   G V+A G    GQLG     G
Sbjct: 19  LPLQAVADESDSVVAAKSTYSGIRMAAGGESHTLALNANGTVWAWG---GGQLGNGSTTG 75

Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            S  P+++  L   V  I+ G  H+ AI  DG ++ WG N  GQLG G    +  P+  +
Sbjct: 76  -SPAPVQVQDLHS-VEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPV--Q 131

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           VE L  I    AA  ++ S+A+   G V +WG    G+LG G +         T  +TP 
Sbjct: 132 VEGLRSIV--GAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSK---------TDRHTPV 180

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
            +K L+ V V I++ GF +S  +  +G V+ +G     ++       +  P  +  L   
Sbjct: 181 RVKGLDSV-VAISS-GFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQGLHSV 238

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
             V  G YH   +   G +++WG N  G LG GS    ++P +V+G           +S 
Sbjct: 239 TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEG----------FSSA 288

Query: 351 VLVSCGWKHTAAI-SEGKILTWG 372
           V V  G+ H+ A+ S+G +  WG
Sbjct: 289 VDVDAGFGHSLALKSDGTVWAWG 311



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 130/299 (43%), Gaps = 47/299 (15%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  H+ A+  +G ++ WG    GQLG G       P P +V+ L  +  +  A G   ++
Sbjct: 47  GESHTLALNANGTVWAWG---GGQLGNGSTTGS--PAPVQVQDLHSV--EAIAAGGSHNL 99

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLH 249
           A+   G V +WG  G G+LG G          +T   TP    ++EG++  + AAA + H
Sbjct: 100 AIKSDGTVWAWGFNGYGQLGDGS---------TTGRNTP---VQVEGLRSIVGAAAHYDH 147

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           S  +  +G V+ +G     ++          P  +  L     +  G  ++  + S G +
Sbjct: 148 SLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLDSVVAISSGFGYSLAVKSDGTV 207

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           + WG NE G LG GS     +P +VQG            S+  V+ G  H  AI  +G +
Sbjct: 208 WAWGKNEYGQLGNGSTTQSSAPVQVQG----------LHSVTAVASGDYHNLAIKRDGTV 257

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGAL 426
            +WG             +  GQLG G+D+D   P  V  F     A+ V  GF H+ AL
Sbjct: 258 WSWG------------PNLAGQLGDGSDMDRYTPVQVEGFS---SAVDVDAGFGHSLAL 301



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 10/134 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS   R+ PV    F   S   +  G  H+L L   G V+A G   F +
Sbjct: 260 WGPNLAGQLGDGSDMDRYTPVQVEGFS--SAVDVDAGFGHSLALKSDGTVWAWGNYQFNE 317

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            G       S  P+++  L   VV I+ G  HS A+  DG ++ WGKN NGQLG G   A
Sbjct: 318 WGFG-----SSTPVQVQELDS-VVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTA 371

Query: 163 KVIPIPTKVECLSG 176
           ++ PI  KV+   G
Sbjct: 372 RLTPI--KVQGFGG 383



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 36/192 (18%)

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVC 295
           +++AA G  H+  ++ NG V+ +G         Q GN +      P  +  L   E +  
Sbjct: 41  IRMAAGGESHTLALNANGTVWAWGGG-------QLGNGSTTGSPAPVQVQDLHSVEAIAA 93

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           GG H   + S G ++ WG N  G LG GS    ++P +V+G            SIV  + 
Sbjct: 94  GGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPVQVEG----------LRSIVGAAA 143

Query: 356 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            + H+ A+ S+G +  W WG           +  GQLG G+  D   P  V   ++V A 
Sbjct: 144 HYDHSLALKSDGTV--WAWG----------RNEYGQLGDGSKTDRHTPVRVKGLDSVVA- 190

Query: 415 QVSCGFNHTGAL 426
            +S GF ++ A+
Sbjct: 191 -ISSGFGYSLAV 201


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 151/339 (44%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           I+    P +V+    +  V  I       +CG   TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHI-------ACGANFTAAI 418



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 164/372 (44%), Gaps = 60/372 (16%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 84  CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 250 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSC 355
              T  LT+ G++ + G++  G LG  + D         G       D+I    VL V+C
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSD---------GRLPCLVEDRIAGEHVLQVAC 358

Query: 356 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H A ++   ++ TWG G +            G+LGHG+  D   PT V   ++    
Sbjct: 359 GSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVR 406

Query: 415 QVSCGFNHTGAL 426
            ++CG N T A+
Sbjct: 407 HIACGANFTAAI 418



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 56  IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           +R+ G     PV         VSCG  HTA I S G++ T+G G            S G 
Sbjct: 175 KRISGALDGLPV-------AYVSCGTWHTALITSMGQLFTFGDG------------SFGV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 170/377 (45%), Gaps = 51/377 (13%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LGLG +E           W+P         ++  +ACG  HTLFLT +G VY
Sbjct: 6   WGNASHGQLGLGGIEDEQILTPSQIPWKP-------DSAVNQVACGHRHTLFLTASGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND+ QLG       +  PL+I  L+  V+ QI+ G  HS A+T  G++  WG N  
Sbjct: 59  ACGSNDYSQLGHELP---TKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG       VI +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG  
Sbjct: 116 GQLGHASD-QDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVK 174

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
             S +     S   Y  RL   L G+     A G  H+  I ++  V+ +G     ++  
Sbjct: 175 SPSEL-----SQCNYPMRLTT-LLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  +   P+ +  L       V CG   +  LT+ G ++T G+   G LG G       
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 288

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSG 388
           P  V        ++ + ++I  V+CG +HT A+  S G+I  +G G            S 
Sbjct: 289 PRMV--------MELMGSTISQVACGNRHTLALVPSRGRIYGFGLG------------SS 328

Query: 389 GQLGHGNDVDYIHPTIV 405
           GQLG  N      P +V
Sbjct: 329 GQLGTRNTKSLNLPQVV 345



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 139/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L ++ RP+     E + +  +ACG  H++ LTE G V + G N+ GQL
Sbjct: 61  GSNDYSQLG-HELPTK-RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   + 
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178

Query: 163 -KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   +  ++    V  WG    G+LG   E       
Sbjct: 179 LSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDE------- 231

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 289

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  +   L+ P+ V GP
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVVIGP 348



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 123/284 (43%), Gaps = 38/284 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++         Q A G   ++ +T  GKV + G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P  I ELE   +   A G  HS  + E G+V  +
Sbjct: 62  SNDYSQLGHELPTK-----------RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSW 110

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A D+ + Q     R   L+SK     ++ CG  H+  LT  GELY+WGSN
Sbjct: 111 GDNECGQLGHASDQDVIQLPKIVRY--LVSKTVV--QIACGNNHSLALTCCGELYSWGSN 166

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
             G LG+ S       E  Q  +       +      ++CG  HT  IS+   + +GW  
Sbjct: 167 IYGQLGVKS-----PSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAV-FGW-- 218

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                   G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 219 --------GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 77/157 (49%), Gaps = 26/157 (16%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           E      PS I   P S   +V CG  HT  LT+ G++Y  GSN+   LG      L + 
Sbjct: 20  EDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSNDYSQLG----HELPTK 75

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             +Q P  E  V      I  ++CG +H+ A++E G++L+WG             +  GQ
Sbjct: 76  RPLQIPELEDYV------ITQIACGSRHSMALTEWGQVLSWG------------DNECGQ 117

Query: 391 LGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           LGH +D D I  P IV +  +   +Q++CG NH+ AL
Sbjct: 118 LGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL 154


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 182/393 (46%), Gaps = 62/393 (15%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120

Query: 158 ------GKKAAKVIPIPTKV---EC------LSGIFTKQAALGFEQSVAVTG-----GGK 197
                   + +  +P+   +   EC       S + T  + L  +  +A +G       +
Sbjct: 121 SEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASE 180

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V  WG    G+LG G        +    + +P+LIK L G+     AAG  HS  +  +G
Sbjct: 181 VFCWGQNKYGQLGLG--------IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG 232

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGS 314
            ++ +G     ++   + N    P L+  L  S+++V   CG  HT  LT  G ++T+G+
Sbjct: 233 AIFGWGRNKFGQLGLNDENDRYVPYLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGA 291

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWG 372
              G LG  S     +P +V         + + + +  ++CG +HT+A   S G+I ++G
Sbjct: 292 GGYGQLGHNSTSHEINPRKV--------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 343

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            GG+            GQLG G+  +   P  V
Sbjct: 344 LGGN------------GQLGTGSTSNRKSPFTV 364



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 39/320 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GI----------SENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVD----------- 141
           G+           ++I   ++  +RI   KK   + S      S +  D           
Sbjct: 117 GLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV 176

Query: 142 --GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
              E++ WG+N  GQLGLG    K    P  ++ L GI   Q A G   S  +T  G + 
Sbjct: 177 SASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            WG    G+LG   E+           Y P L+K L   K+     G  H+A + + G V
Sbjct: 236 GWGRNKFGQLGLNDEN---------DRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGV 286

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNE 316
           + FG     ++     +H   P  + +L  S   ++ CG  HT   + S G +Y++G   
Sbjct: 287 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 346

Query: 317 NGCLGIGSIDVLHSPERVQG 336
           NG LG GS     SP  V+G
Sbjct: 347 NGQLGTGSTSNRKSPFTVKG 366



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 120/317 (37%), Gaps = 77/317 (24%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 264 ------------DRAVDKMLFQEGNH----------ARRPSLISKL-----PYSEEVVCG 296
                        R   K +F   +           A R S +S L     P S     G
Sbjct: 113 DGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESG 172

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQG----PFSESPVDQICTSI 350
                V  S  E++ WG N+ G LG+G ID     SP+ ++     PF +          
Sbjct: 173 Q----VAVSASEVFCWGQNKYGQLGLG-IDCKKQTSPQLIKSLLGIPFMQ---------- 217

Query: 351 VLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
             V+ G  H+  ++  G I  WG             +  GQLG  ++ D   P ++    
Sbjct: 218 --VAAGGAHSFVLTLSGAIFGWG------------RNKFGQLGLNDENDRYVPYLLKSLR 263

Query: 410 NVKALQVSCGFNHTGAL 426
           + K + + CG +HT AL
Sbjct: 264 SQKIVYICCGEDHTAAL 280


>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 176/380 (46%), Gaps = 49/380 (12%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
           WR     AF+ + LK    G + T    F+     +YA G N+FGQLGI  +I  YS + 
Sbjct: 2   WR----RAFQ-NCLKIAFIGSSVTFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           + I    ++V+ ++     S+AI   G+LY WG++  G LG G+   + I +P+ V+CL 
Sbjct: 57  VPI----QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINVPSLVQCLK 110

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
            +  K  A G     A+T  G++ +WG    G+LGH  ++S     R   EY   L    
Sbjct: 111 HLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAK 170

Query: 232 IKELE--GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKL 287
           + EL     KV+  A G   +  + E+G VY  G      + +Q  N    P+   I  L
Sbjct: 171 LPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKN-VDEPTFKQIPDL 229

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
               ++  G   +  L S G ++ WGSN  G LG  S  V+ +P++++G           
Sbjct: 230 KNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKG----------L 279

Query: 348 TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
             I   SCG +   A+S +G + TWG+GG             GQLG  +  D   P  + 
Sbjct: 280 PKIKQFSCGEQFIGALSTDGVLYTWGFGGD------------GQLGTPSKQDIPTPHKIQ 327

Query: 407 FGENVKALQVSCGFNHTGAL 426
           F +N+   +VSCG  H G +
Sbjct: 328 FDQNID--KVSCGQAHVGIV 345



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 187/407 (45%), Gaps = 63/407 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+LG+G+  S++ P +        +  +AC  + +  + ++G +Y  G + FG 
Sbjct: 35  WGWNNFGQLGIGNSISQYSPQLVPI---QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGL 91

Query: 103 LGIS--ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    ENI     P  +  LK  +   ++ G +H +AIT DG+LY WG   +G+LG   
Sbjct: 92  LGNGQVENINV---PSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSF 148

Query: 160 KAAKVIPIPTKVECLSGIFT-------------KQAALGFEQSVAVTGGGKVLSWGAGGS 206
             +  +P   K E    + +             +Q ALG + ++ ++  G V S G    
Sbjct: 149 DNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKK 208

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LG+          ++  E T + I +L+ + V+I + G   S  +D +G ++ +G   
Sbjct: 209 GILGYQ--------TKNVDEPTFKQIPDLKNI-VQIDS-GTDFSVALDSDGNMFAWGSNY 258

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             ++     +  + P  I  LP  ++  CG      L++ G LYTWG   +G LG  S  
Sbjct: 259 FGQLGTPSPSVVQTPQQIKGLPKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQ 318

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 386
            + +P ++Q        DQ   +I  VSCG  H   +S+ K+   G G            
Sbjct: 319 DIPTPHKIQ-------FDQ---NIDKVSCGQAHVGIVSKNKLYMHGRGKE---------- 358

Query: 387 SGGQLGHGNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALLE 428
             GQLG G++ +  +     P +V   ENV  ++++CG +H+ A++ 
Sbjct: 359 --GQLGRGSETESPNSSRYSPLLVM--ENV--IKIACGGSHSFAVVN 399


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 43/367 (11%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV-----LVSCGW 357
           +T  G +YT+G   +G LG+G  +           F+   +  +C++ +     LV+CG 
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLEN-----------FTNHFIPTLCSNFLRFIVKLVACGG 358

Query: 358 KHTAAIS 364
            H    +
Sbjct: 359 CHMVVFA 365



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVT--IGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 39/371 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +   ++ +ACG  +T+ +T+ G +Y+ G ND+
Sbjct: 31  WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  + + G +H+ AI   G+L+ WG N+ GQLGL  
Sbjct: 91  GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K   +   P  V+ L      Q A G + + A+T  G++ SWG+   G+LG G +     
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK--- 203

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+ I    G+ +   A G  HS  I ++G V+ +G     ++   +     
Sbjct: 204 -----YEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG GS      P +V   
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQV--- 315

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + +++  +SCG +HT A+  S G++  WG GG+            GQLG+ +
Sbjct: 316 -----MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNHS 358

Query: 396 DVDYIHPTIVN 406
                 P +V+
Sbjct: 359 TRSVTTPQVVH 369



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 18/299 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K  ACG  HTL + E G +++ G N  GQL
Sbjct: 86  GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    VVQI+ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK 203

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P  +    GI     A G   S+A++  G V  WG    G+LG          L 
Sbjct: 204 YEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLG----------LN 252

Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            T +   P  ++ L+  K+  AA G   S  +  +G V+  G     ++     ++   P
Sbjct: 253 DTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILP 312

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S   + +P+ V GP
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 172/375 (45%), Gaps = 58/375 (15%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            PV+   +  H  K + C G+     T  G +   G+ D       ENI   L P  +  
Sbjct: 13  EPVIAVEYPLHKKKDMFCWGS-----TIHGELGLGGIED-------ENI---LIPRELDF 57

Query: 121 LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGI 177
            K  E+ QI+ G +++  IT  GE+Y  G N  GQLG   G+K  ++IP       L   
Sbjct: 58  KKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP------GLDAF 111

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             K+AA G   ++A+   G++ SWG+   G+LG   ++ +        E +PR++K L  
Sbjct: 112 VFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFM--------ESSPRMVKTLGT 163

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK---LPYSEEV 293
             V   A G  H+  +  NG +Y +G  +  ++ L  +  +  +P  IS    +P +  +
Sbjct: 164 SVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAF-I 222

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CGGYH+  ++  G ++ WG N  G LG+      + P ++Q   +     +IC +    
Sbjct: 223 ACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNA----KICYA---- 274

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG + +  ++ +G + T G G              GQLGHG++ + I P  V       
Sbjct: 275 ACGEEFSVFLTVDGGVFTCGAGMY------------GQLGHGSNSNEILPRQVMELMGST 322

Query: 413 ALQVSCGFNHTGALL 427
             Q+SCG  HT AL+
Sbjct: 323 VTQISCGKRHTLALV 337


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 47  GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 36/308 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G HHS  +  +  +Y  G NS GQLG  +  +   P P  ++ L+ +     +
Sbjct: 23  ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E SVAV   GKV +WGAG  G+LG G+   I         + P  IK L G+K+   
Sbjct: 81  CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
           + G  HS  + E+G V+ +G  +  ++    G ++R  ++  K+   E     +V  GG 
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  L+  G  + WGSN +G L +    V    E++  P S   +  +  S++ +SCG++
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKV---KEQIYKPHSIGALKNL--SVIYISCGYE 245

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HTA ++ EG++ T+G G S G       S  GQ G         P ++  G   +  Q+ 
Sbjct: 246 HTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG---------PQLIE-GIGGRVSQIE 292

Query: 418 CGFNHTGA 425
           C   HT A
Sbjct: 293 CASYHTIA 300



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 147/312 (47%), Gaps = 29/312 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     VY+ G N +GQLG   +   +  P  I  L    V  +S G  HS
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  
Sbjct: 87  VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG    G+LG G+ S         S+  P+ +K LEG+ +   AAG  HS  +  
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197

Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
            G  + +G     ++    GN  +    +P  I  L     +   CG  HT VLT  G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEGK 367
           +T+G N +G L          P+ ++G         I   +  + C   HT A   + G+
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEG---------IGGRVSQIECASYHTIAYVYTTGQ 307

Query: 368 ILTWGWGGSHGT 379
           +++ G G SH +
Sbjct: 308 VVSLGRGPSHTS 319



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 98  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 39/263 (14%)

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           SGI   QAA G   S+ +    +V S G    G+LG           R  S   P  I+ 
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
           L  + V + + G  HS  +   G+V+ +G  +  ++    F+E +    P+ I  L   +
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICT 348
             +V CG YH+  L+  G +++WG N  G LG+G      + P++V+      P+ Q   
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQ--- 184

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIV 405
               V+ G  H+ A+S     ++GWG +            GQL   GN V      P  +
Sbjct: 185 ----VAAGGTHSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSI 229

Query: 406 NFGENVKALQVSCGFNHTGALLE 428
              +N+  + +SCG+ HT  L E
Sbjct: 230 GALKNLSVIYISCGYEHTAVLTE 252



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 26/204 (12%)

Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           PR +K    G+++  AA+G  HS  +  N RVY  GD +  ++  +      RP  I  L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
              + + V CG  H+  +   G+++ WG+   G LGIG   ++   P +++         
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-------- 123

Query: 345 QICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHP 402
                I+ VSCG  H+ A+SE G + +W            G +S GQLG G N      P
Sbjct: 124 LAGIKIIQVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIP 171

Query: 403 TIVNFGENVKALQVSCGFNHTGAL 426
             V   E +   QV+ G  H+ AL
Sbjct: 172 QKVKSLEGIPLAQVAAGGTHSFAL 195


>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
            (RCC1) repeat [Roseburia intestinalis XB6B4]
          Length = 1546

 Score =  122 bits (306), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 101/363 (27%), Positives = 167/363 (46%), Gaps = 54/363 (14%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            +WG  D+G++G G+ ++R++P   +    H + +++ G  ++  +T+ G +Y  G N +G
Sbjct: 762  MWGVNDFGQIGDGTTKNRYKP---TKILDHVV-SVSLGDYYSGAITQDGSLYMWGSNVYG 817

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            Q+G     G + +  + + +   V+ +S GY HS AIT DG LYMWG N +GQ+G G   
Sbjct: 818  QIGD----GTTEDRYKPTKILDHVIAVSLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTE 873

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +    PTK+  L  +     +LG   S A+T  G +  WG+   G +G G         
Sbjct: 874  DRY--KPTKI--LDHVIA--VSLGVSHSGAITQDGSLYMWGSNSRGGIGDG--------- 918

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              T+E   +  K L+ V       G  +S  I ++G +Y++G     ++   +G    R 
Sbjct: 919  --TTEVRYKPTKILDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEI--GDGTEEDRY 972

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
                 L +   V  G  H+  +T  G LY WG N  G +G G+ +  + P +        
Sbjct: 973  KPTKILDHVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTK-------- 1024

Query: 342  PVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                I   ++ VS G  H+ AI++ G +  WGW            +S GQ+G G      
Sbjct: 1025 ----ILDHVIAVSLGVGHSGAITQDGSLYMWGW------------NSDGQIGDGTTKARY 1068

Query: 401  HPT 403
             PT
Sbjct: 1069 TPT 1071



 Score =  114 bits (286), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 29/296 (9%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            +WG+  YG++G G+ E R++P   +    H + A++ G  H+  +T+ G +Y  G ND G
Sbjct: 810  MWGSNVYGQIGDGTTEDRYKP---TKILDHVI-AVSLGYCHSGAITQDGSLYMWGSNDSG 865

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            Q+G     G + +  + + +   V+ +S G  HS AIT DG LYMWG NS G  G+G   
Sbjct: 866  QIGD----GTTEDRYKPTKILDHVIAVSLGVSHSGAITQDGSLYMWGSNSRG--GIGDGT 919

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +V   PTK+  L  +       G   S A+T  G +  WG+   G +G G E       
Sbjct: 920  TEVRYKPTKI--LDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEIGDGTEED----- 970

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 Y P  I +     V   + G  HS  I ++G +Y++G     ++   +G    R 
Sbjct: 971  ----RYKPTKILD----HVIAVSLGDDHSGAITQDGSLYMWGRNYYGEI--GDGTEEDRY 1020

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
                 L +   V  G  H+  +T  G LY WG N +G +G G+    ++P ++  P
Sbjct: 1021 KPTKILDHVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPTQITIP 1076



 Score =  111 bits (278), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 99/357 (27%), Positives = 161/357 (45%), Gaps = 56/357 (15%)

Query: 74   KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            + L+ G  H+  + + G +Y  G+NDFGQ+G     G +    + + +   VV +S G +
Sbjct: 742  QVLSLGDYHSGVIAQDGSLYMWGVNDFGQIG----DGTTKNRYKPTKILDHVVSVSLGDY 797

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            +S AIT DG LYMWG N  GQ+G G    +    PTK+  L  +     +LG+  S A+T
Sbjct: 798  YSGAITQDGSLYMWGSNVYGQIGDGTTEDRY--KPTKI--LDHVIA--VSLGYCHSGAIT 851

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G +  WG+  SG++G G          +   Y P  I +     V   + G  HS  I
Sbjct: 852  QDGSLYMWGSNDSGQIGDGT---------TEDRYKPTKILD----HVIAVSLGVSHSGAI 898

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             ++G +Y++G  +   +   +G    R      L +   V     ++  +T  G LY WG
Sbjct: 899  TQDGSLYMWGSNSRGGI--GDGTTEVRYKPTKILDHVIAVSLQTGNSGAITQDGSLYMWG 956

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            SN  G +G G+ +  + P +            I   ++ VS G  H+ AI++ G +  W 
Sbjct: 957  SNVYGEIGDGTEEDRYKPTK------------ILDHVIAVSLGDDHSGAITQDGSLYMW- 1003

Query: 373  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLE 428
                       G +  G++G G + D   PT I++       + VS G  H+GA+ +
Sbjct: 1004 -----------GRNYYGEIGDGTEEDRYKPTKILD-----HVIAVSLGVGHSGAITQ 1044



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 64/289 (22%), Positives = 115/289 (39%), Gaps = 70/289 (24%)

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
           +++  +LG   S  +   G +  WG    G++G G          + + Y P  I +   
Sbjct: 740 YSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGT---------TKNRYKPTKILD--- 787

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
             V   + G  +S  I ++G +Y++G     ++   +G    R      L +   V  G 
Sbjct: 788 -HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQI--GDGTTEDRYKPTKILDHVIAVSLGY 844

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            H+  +T  G LY WGSN++G +G G+ +  + P +            I   ++ VS G 
Sbjct: 845 CHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTK------------ILDHVIAVSLGV 892

Query: 358 KHTAAISE-GKILTWGWG------------------------------GSHGTFSED--- 383
            H+ AI++ G +  WG                                G+ G  ++D   
Sbjct: 893 SHSGAITQDGSLYMWGSNSRGGIGDGTTEVRYKPTKILDHVIAVSLQTGNSGAITQDGSL 952

Query: 384 ---GHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLE 428
              G +  G++G G + D   PT I++       + VS G +H+GA+ +
Sbjct: 953 YMWGSNVYGEIGDGTEEDRYKPTKILD-----HVIAVSLGDDHSGAITQ 996


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 156/341 (45%), Gaps = 37/341 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G   + ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 287 WGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNA 346

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG      V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 347 GLLGHGSNVSHWI-PKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 405

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
            +A+     P +VE L G+ T   + G   + AV            GK+ +WG G   RL
Sbjct: 406 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 463

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  +  L       AA G   +  +  +G ++  G   V  
Sbjct: 464 GHGDRSSKL---------KPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-PVYG 513

Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EV CG YH  VLT+ GE+YTWG   NG LG G I 
Sbjct: 514 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIA 573

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
               P  V     E+  D+   S+  V+CG   TAAI + K
Sbjct: 574 DRKVPTLV-----EALKDR---SVKRVACGSSFTAAICQHK 606



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 174/378 (46%), Gaps = 64/378 (16%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T    V+  G    G+LG  I  N+    +P  +  L    V+ I+ G 
Sbjct: 268 VACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNV---FQPRLVESLSTCNVELIACGE 324

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   +
Sbjct: 325 FHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLDGLPVSAVSCGTWHT 382

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG         R++  Y P+ ++ L+G++    + G  H
Sbjct: 383 ALITSSGQLYTFGDGTFGVLGHGN--------RASCSY-PKEVESLKGLRTISVSCGVWH 433

Query: 250 SACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEV 293
           +A + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  + 
Sbjct: 434 TAAVVEVIISQSNASSGKLFTWGDG--DKYRLGHGDRSSKLKPTCVPSLID---YNFHKA 488

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVL 352
            CG   T  LT+ G ++T GS   G LG  + D         G +     +Q+    +V 
Sbjct: 489 ACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNND---------GRYPRLVEEQLGGGGVVE 539

Query: 353 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           V+CG  H A ++  G++ TWG G            + G+LGHG+  D   PT+V   ++ 
Sbjct: 540 VACGSYHVAVLTNAGEVYTWGKG------------TNGRLGHGDIADRKVPTLVEALKDR 587

Query: 412 KALQVSCGFNHTGALLEY 429
              +V+CG + T A+ ++
Sbjct: 588 SVKRVACGSSFTAAICQH 605



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 54/306 (17%)

Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  + G  + A        + +P  +E    +     A G + +  VT
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG     +G    T+ + PRL++ L    V++ A G  H+  +
Sbjct: 280 RQAEVFTWGEECSGRLGHG-----IG----TNVFQPRLVESLSTCNVELIACGEFHTCAV 330

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S     LP S  V CG +HT ++TS G
Sbjct: 331 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-AVSCGTWHTALITSSG 389

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-- 365
           +LYT+G    G LG G+      P+ V+               + VSCG  HTAA+ E  
Sbjct: 390 QLYTFGDGTFGVLGHGNRASCSYPKEVESLKG--------LRTISVSCGVWHTAAVVEVI 441

Query: 366 --------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
                   GK+ TWG G  +            +LGHG+    + PT V    +    + +
Sbjct: 442 ISQSNASSGKLFTWGDGDKY------------RLGHGDRSSKLKPTCVPSLIDYNFHKAA 489

Query: 418 CGFNHT 423
           CG   T
Sbjct: 490 CGHTLT 495



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 26/214 (12%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P+ ++    + V   A G  H+A +     V+ +G+    ++    G +  +P 
Sbjct: 248 TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPR 307

Query: 283 LISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGP 337
           L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +V H  P+RV GP
Sbjct: 308 LVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS-NVSHWIPKRVSGP 366

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
               PV         VSCG  HTA I S G++ T+G     GTF        G LGHGN 
Sbjct: 367 LDGLPVS-------AVSCGTWHTALITSSGQLYTFG----DGTF--------GVLGHGNR 407

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
               +P  V   + ++ + VSCG  HT A++E +
Sbjct: 408 ASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVI 441


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 178/375 (47%), Gaps = 55/375 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +++ G +Y+ G    G+LG   +   +  P  I  L    ++ ++ G
Sbjct: 315 VQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-HPKLIDALTHMNIELVACG 373

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
            +H+ A+T+ G+LY WG  +   G LG G   +  +P   K+   L GI     + G   
Sbjct: 374 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP--KKLHGPLEGIHVSSISCGPFH 431

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +V VT  G++ ++G G  G LGHG   S+           P+ ++ L+G++   AA G  
Sbjct: 432 TVIVTSAGQLFTFGDGSFGVLGHGDRESL---------SVPKEVESLKGLRTVRAACGVW 482

Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
           H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +
Sbjct: 483 HTAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKESRLVPTCVAALVEPNFCQ 540

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           V CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V++I      
Sbjct: 541 VACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGM-LPARVEGKLHKNFVEEI------ 593

Query: 353 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            SCG  H A + S  ++ TWG G +            G+LGHGN  D   PT+V   ++ 
Sbjct: 594 -SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGNTDDKNTPTLVEALKDK 640

Query: 412 KALQVSCGFNHTGAL 426
           +   V CG N T A+
Sbjct: 641 QVRNVVCGTNFTAAI 655



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 154/339 (45%), Gaps = 38/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 337 WGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 396

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P ++ G  +   V  IS G  H+  +T  G+L+ +G  S G LG G
Sbjct: 397 GLLGHGNDISHWV-PKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG 455

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 456 DRES--LSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 513

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 514 GRLGHGDKESRL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 564

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G+
Sbjct: 565 YGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGN 624

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            D  ++P  V     E+  D+   ++V   CG   TAAI
Sbjct: 625 TDDKNTPTLV-----EALKDKQVRNVV---CGTNFTAAI 655



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 120/278 (43%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G + +  V+  G++ SWG    GRLGHG +  +         
Sbjct: 303 VPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-------- 354

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSL 283
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN   H     L
Sbjct: 355 -HPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKL 413

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              L   +   + CG +HT ++TS G+L+T+G    G LG G  + L  P+ V+      
Sbjct: 414 HGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVES----- 468

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GKI TWG G              
Sbjct: 469 -LKGLRT--VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK------------ 513

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         QV+CG   T AL
Sbjct: 514 GRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVAL 551



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++          P LI  L 
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALT 363

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ D+ H  P+++ GP     V
Sbjct: 364 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPKKLHGPLEGIHV 422

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HT  + S G++ T+G G            S G LGHG+      P
Sbjct: 423 SSI-------SCGPFHTVIVTSAGQLFTFGDG------------SFGVLGHGDRESLSVP 463

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 464 KEVESLKGLRTVRAACGVWHTAAVVEVM 491


>gi|449502541|ref|XP_004161671.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 263

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/83 (66%), Positives = 65/83 (78%)

Query: 347 CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
           C ++ L +   K T  +  G I TWGWGGSHGTFS DGHSSGGQLGHG+DVDY+ PT ++
Sbjct: 180 CVTLRLPTANHKPTYTLICGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKID 239

Query: 407 FGENVKALQVSCGFNHTGALLEY 429
            GENVK +QVSCGFNHTGA+LEY
Sbjct: 240 LGENVKVVQVSCGFNHTGAILEY 262


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 166/336 (49%), Gaps = 29/336 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P+  +     ++  +  G  HT+ LT++G V++ G ND 
Sbjct: 4   WGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGNNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG  +      +P ++ GL    + +IS G +H+ A    G+L+ WG +S+GQLG   
Sbjct: 64  DQLGHKKQ---RTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNG 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 P+P  ++ L+     Q + G   S+A+T  G++ SWG    G+LG G       
Sbjct: 121 TTQ---PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG------- 170

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +RS  E  P LIK L G+ +   A G  HS  + ++G +Y +G     ++   +  +  
Sbjct: 171 -MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKL 229

Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L     + + CG   +  L++ G ++T G+   G LG GS      P ++   
Sbjct: 230 HPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKI--- 286

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTW 371
                ++ + +++  VSCG +HT A+  S G++ ++
Sbjct: 287 -----MELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 139/297 (46%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D  +LG    + R +P      + + +  ++CGG HTL   E G ++  G +  GQL
Sbjct: 59  GNNDLDQLG--HKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQL 116

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G +      L  +  S     +VQIS G +HS A+T +GELY WG N +GQLGLG + ++
Sbjct: 117 GFN-GTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR-SE 174

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               PT ++ L GI     A G   S A++  G +  WG    G+LG   E + L     
Sbjct: 175 YEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH---- 230

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
                P  +K L  ++VK  A G   SA +  +G V+  G     ++     ++   P  
Sbjct: 231 -----PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRK 285

Query: 284 ISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           I +L  S   +V CG  HT  L  S G +Y++G    G LG        +P+ V GP
Sbjct: 286 IMELMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGGGGQLGTRVKTNCSTPQVVLGP 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 40/308 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V Q++ G +H+  +T  GE++  G N   QLG  K+  K    P KVE L      + + 
Sbjct: 36  VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTK----PEKVEGLDFYRITKISC 91

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++A    G++  WG+   G+LG             T++  P++IK L    +   +
Sbjct: 92  GGNHTLAFNEWGQLFGWGSDSHGQLG----------FNGTTQPLPKIIKSLATFHIVQIS 141

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
            G  HS  +  NG +Y +G     ++ L     + ++P+LI  L   P +  + CG  H+
Sbjct: 142 CGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAF-IACGSNHS 200

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L+  G +Y WG N  G LG+   +    P +++   S          +  ++CG   +
Sbjct: 201 FALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRS--------IRVKYIACGEDFS 252

Query: 361 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           A +S +G + T G G              GQLGHG+  + I P  +         QVSCG
Sbjct: 253 AFLSADGGVFTCGAGMY------------GQLGHGSTSNEILPRKIMELMGSTVTQVSCG 300

Query: 420 FNHTGALL 427
             HT AL+
Sbjct: 301 KRHTLALV 308



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 32/285 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG   +G+LGLG      I  P +          Q  +G   +V +T  G+V S G 
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               +LGH ++ +            P  ++ L+  ++   + G  H+   +E G+++ +G
Sbjct: 61  NDLDQLGHKKQRT-----------KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWG 109

Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             +  ++ F  G     P +I  L   +  ++ CG  H+  LT+ GELY+WG N +G LG
Sbjct: 110 SDSHGQLGFN-GTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLG 168

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
           +G    + S    Q    +S    +   I  ++CG  H+ A+S+   + +GWG       
Sbjct: 169 LG----MRSEYEKQPTLIKS---LLGIPIAFIACGSNHSFALSKSGAI-YGWG------- 213

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               ++ GQLG  ++ + +HPT +    +++   ++CG + +  L
Sbjct: 214 ---KNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 59/139 (42%), Gaps = 9/139 (6%)

Query: 9   MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWR 61
           M   Y KQ   + S LGI   +I+      FA         WG   YG+LGL   E++  
Sbjct: 171 MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P          +K +ACG   + FL+  G V+  G   +GQLG        L P +I  L
Sbjct: 231 PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL-PRKIMEL 289

Query: 122 K-KEVVQISTGYHHSSAIT 139
               V Q+S G  H+ A+ 
Sbjct: 290 MGSTVTQVSCGKRHTLALV 308


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 28/289 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
           GN  YG LG G   S   P    A    S+K  A G G H L LTE G VY+ G ND+ +
Sbjct: 52  GNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111

Query: 103 LGISENIGYSLEPLRI-SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + +    L P  I S L  E VV I+ G HHS A+T  GE+Y WG N +GQ+G G  
Sbjct: 112 LG-NRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTI 170

Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + V PIP  +   L+G      + G   SVAVT  G+V SWG  G G+LG G       
Sbjct: 171 LSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIG------- 223

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               TS+  P+ +     + ++    G++H+  + + G +Y++G  +  ++     ++  
Sbjct: 224 --NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVW 281

Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
            P   +KL   E     ++    YH  +  ++ G  ++ WG     CLG
Sbjct: 282 IP---TKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ----CLG 323



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 140/299 (46%), Gaps = 27/299 (9%)

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
           TL +T+   VY  G N +G LG  +    ++ P +I  L  K V   + G   H  A+T 
Sbjct: 39  TLIVTKDDMVYGIGNNTYGCLGTGDTHS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           +G++Y WG N   +LG       + P  IP+    L+  F    A G   S+A+T  G+V
Sbjct: 98  EGKVYSWGYNDYCELGNRSTNEGLTPTLIPS---ALNNEFVVDIACGGHHSLALTNKGEV 154

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
            +WG   SG++G        G + ST +  P+L+   L G KV   + G   S  + +NG
Sbjct: 155 YAWGHNVSGQVG-------CGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNG 207

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G   V ++          P  ++       E+VVCG  HT  L+  G+LY WG+N
Sbjct: 208 EVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGAN 267

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA-AISEG-KILTWG 372
             G LG+ +   +  P ++Q P     +D       + +  + H + A+SEG +I  WG
Sbjct: 268 SYGQLGLNTDSNVWIPTKLQVPEMGRILD-------IATSHYHHISLAMSEGNRIFMWG 319



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G++G G++ S  +P+   +        +  ++CG + ++ +T+ G VY+ G N 
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNG 216

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLGI  N     EP +++   K V++ +  GY H+ A++ +G+LY+WG NS GQLGL 
Sbjct: 217 VGQLGIG-NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLN 275

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
             +   IP   +V  +  I     +     S+A++ G ++  WG
Sbjct: 276 TDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWG 319



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 110/250 (44%), Gaps = 43/250 (17%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT    V   G    G LG G   S +          P+ I+ L G  VK  A G 
Sbjct: 38  ETLIVTKDDMVYGIGNNTYGCLGTGDTHSTI---------YPKKIEALCGKSVKTFAYGK 88

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVL 303
             H   + E G+VY +G     ++  +  N    P+LI     +E VV   CGG+H+  L
Sbjct: 89  GPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLAL 148

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC------TSIVLVSCGW 357
           T+ GE+Y WG N +G +G G+I        VQ      P+ ++         +V +SCG 
Sbjct: 149 TNKGEVYAWGHNVSGQVGCGTI-----LSTVQ------PIPKLLHIVLNGKKVVHISCGD 197

Query: 358 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
             + A+++ G++ +WG            H+  GQLG GN      P  V     +   +V
Sbjct: 198 SSSVAVTDNGEVYSWG------------HNGVGQLGIGNCTSQAEPQKVATFAKIVIEKV 245

Query: 417 SCGFNHTGAL 426
            CG+ HT AL
Sbjct: 246 VCGYMHTLAL 255



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG+G+  S+  P   + F K  ++ + CG  HTL L++ G +Y  G N +GQ
Sbjct: 212 WGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQ 271

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
           LG++ +    +   L++  + + +   ++ YHH S A++    ++MWG+       LG+ 
Sbjct: 272 LGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ------CLGQS 325

Query: 161 AAKVIPIPTKVECL 174
               +P  T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 4   GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQL 63

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 64  GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 122

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 123 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 176

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 177 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 236

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 237 LIEGIGGRVSQIECASYHTIAYVYTTG 263



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 29/294 (9%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
           Y+ G N +GQLG   +      P  I  L    V  +S G  HS A+   G+++ WG  S
Sbjct: 1   YSCGDNSWGQLGQRRDQSTE-RPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGS 59

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  G V SWG    G+LG 
Sbjct: 60  EGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G+ S         S+  P+ +K LEG+ +   AAG  HS  +   G  + +G     ++ 
Sbjct: 119 GKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLA 170

Query: 272 FQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              GN  +    +P  I  L     +   CG  HT VLT  G+++T+G N +G L     
Sbjct: 171 L-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPR 229

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEGKILTWGWGGSH 377
                P+ ++G         I   +  + C   HT A   + G++++ G G SH
Sbjct: 230 SGQRGPQLIEG---------IGGRVSQIECASYHTIAYVYTTGQVVSLGRGPSH 274



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 55  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 114

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 115 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 174

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 175 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 234

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 235 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 26/218 (11%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           LG  R  S   P  I+ L  + V + + G  HS  +   G+V+ +G  +  ++   E   
Sbjct: 11  LGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKE 70

Query: 278 -ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PER 333
            +  P+ I  L   +  +V CG YH+  L+  G +++WG N  G LG+G      + P++
Sbjct: 71  ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 130

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG- 392
           V+      P+ Q       V+ G  H+ A+S     ++GWG +            GQL  
Sbjct: 131 VKS-LEGIPLAQ-------VAAGGTHSFALSLTGT-SFGWGSNR----------SGQLAL 171

Query: 393 HGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN V      P  +   +N+  + +SCG+ HT  L E
Sbjct: 172 SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 209


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 165/363 (45%), Gaps = 41/363 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  +R  PV+      H +  +  G   T+ L   G V+  G N+ GQ
Sbjct: 57  WGYGDRGQLGNGTWSARTTPVMAKGL-NHVID-VHTGVRSTMALRSDGTVWTWGSNENGQ 114

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI      ++ P ++SGL   +  +S G  +HS A++ DG ++ WGKN NG+LG G   
Sbjct: 115 LGIGTVTDMNV-PGQVSGLSG-IKAVSGGLGYHSMALSEDGSVWTWGKNDNGELGNGTTL 172

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+  +V  L+ + T  AA G+  S+A+   G V +WG  G G LG G         
Sbjct: 173 QQNTPV--QVAGLNDV-TAIAAGGYF-SLALKSDGTVWAWGVNGDGELGDGT-------- 220

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T  Y P  +  L    V   AAG  HS  + ++G V+ +G      +      +  RP
Sbjct: 221 -TTDRYVPVQVAGL--TDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRP 277

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             I  L +   V  GGYH+  L   G +++WG N    LG+GS      P  V G     
Sbjct: 278 VQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSG----- 332

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                   +  ++ G  H+ A+ +   + WGW          G + GGQLG G       
Sbjct: 333 -----IEHVREIAAGGFHSVAMKKDGTV-WGW----------GFNGGGQLGDGTSSTRDT 376

Query: 402 PTI 404
           PT+
Sbjct: 377 PTL 379



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 150/303 (49%), Gaps = 20/303 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
           WG+ + G+LG+G++     P   S      +KA++ G G H++ L+E G V+  G ND G
Sbjct: 107 WGSNENGQLGIGTVTDMNVPGQVSGLS--GIKAVSGGLGYHSMALSEDGSVWTWGKNDNG 164

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG    +  +  P++++GL  +V  I+ G + S A+  DG ++ WG N +G+LG G   
Sbjct: 165 ELGNGTTLQQNT-PVQVAGLN-DVTAIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTT 222

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  +V  L+ +     A G   S+AVT  G V +WG    G LG G         
Sbjct: 223 DRYVPV--QVAGLTDVMA--IAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTR------- 271

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  IK L+ + V +A  G+ HS  +D  G V+ +GD +  ++       +  P
Sbjct: 272 --TNRTRPVQIKNLQHI-VAVAGGGY-HSLALDRTGNVWSWGDNSQRQLGVGSNASSLIP 327

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +S + +  E+  GG+H+  +   G ++ WG N  G LG G+     +P   +     +
Sbjct: 328 VPVSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTT 387

Query: 342 PVD 344
           P D
Sbjct: 388 PPD 390



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 22/233 (9%)

Query: 43  WG-NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG NGD G LG G+   R+ PV  +      + A+A GG+H+L +T+ G V+A G N +G
Sbjct: 208 WGVNGD-GELGDGTTTDRYVPVQVAGLT--DVMAIAAGGSHSLAVTQDGTVWAWGKNTYG 264

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG       +  P++I  L + +V ++ G +HS A+   G ++ WG NS  QLG+G  A
Sbjct: 265 TLGDGTRTNRT-RPVQIKNL-QHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNA 322

Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +IP+P     +SGI   ++ A G   SVA+   G V  WG  G G+LG G        
Sbjct: 323 SSLIPVP-----VSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT------- 370

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
             S++  TP L K +         +G L+   I  +  V +   +AVD M  Q
Sbjct: 371 --SSTRDTPTLTKAVLDTTPPDPGSGTLNPDSITTDS-VALQWPKAVDNMTEQ 420



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 39/301 (12%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALG 185
           ++  GY+H++++   GE+Y WG    GQLG G  +A+  P+  K +  +  + T     G
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNHVIDVHT-----G 91

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              ++A+   G V +WG+  +G+LG G           T    P  +  L G+K      
Sbjct: 92  VRSTMALRSDGTVWTWGSNENGQLGIGT---------VTDMNVPGQVSGLSGIKAVSGGL 142

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G+ HS  + E+G V+ +G     ++          P  ++ L     +  GGY +  L S
Sbjct: 143 GY-HSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAIAAGGYFSLALKS 201

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G ++ WG N +G LG G+    + P +V G           T ++ ++ G  H+ A+++
Sbjct: 202 DGTVWAWGVNGDGELGDGTTTDRYVPVQVAG----------LTDVMAIAAGGSHSLAVTQ 251

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
              + W W          G ++ G LG G   +   P  +   +++ A  V+ G  H+ A
Sbjct: 252 DGTV-WAW----------GKNTYGTLGDGTRTNRTRPVQIKNLQHIVA--VAGGGYHSLA 298

Query: 426 L 426
           L
Sbjct: 299 L 299


>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
           2-like [Saccoglossus kowalevskii]
          Length = 1049

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 177/401 (44%), Gaps = 61/401 (15%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           + + LQR   + WG   YG+LGLG  + + +P          +  +  GG HTL LT+ G
Sbjct: 19  VGTCLQRGMFS-WGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTDCG 77

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            +Y+ G N  GQLG+      S+   RI  L   V++++ G+    AIT  G+LY WG N
Sbjct: 78  AIYSCGWNSKGQLGLGHTDNLSVFK-RIDHL-PPVIKVTCGWDFCLAITEVGDLYAWGCN 135

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQLG+  +      IPTK++  S   T  AA G   S+AVT  GK+ SWG+   G+LG
Sbjct: 136 VFGQLGI-PEIDSFTAIPTKIQIFSRNVTSIAA-GLRHSLAVTNDGKLWSWGSARKGQLG 193

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH--SACIDENGRVYIFGDRAVD 268
           + Q  +    L    +  P+ + +LE +    + +      +AC    G +Y++G    +
Sbjct: 194 NDQSKTGYQLL----QRVPKQVHKLENISSVSSGSYHSTALTAC----GNMYLWGSNKHN 245

Query: 269 KM------LFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWG 313
           ++      + Q G  ++   L      + E         V  G  H   +T    ++ WG
Sbjct: 246 QLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWG 305

Query: 314 SNENGCLGI-------GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-E 365
            N+   LGI          DV    E V           I   I  ++CG +H  A+S +
Sbjct: 306 RNDYSQLGISLTGNNCAKKDVTKPKELV-----------ILKDIKQIACGSEHNLALSDD 354

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
            K+L WGW            +  G  G+G + + + P +++
Sbjct: 355 NKVLAWGW------------NEHGSCGNGKEENVLTPQVID 383


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 175/400 (43%), Gaps = 57/400 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
           WG+  YG+LG G+   R  PV         + ALA GG        AH+L L   G V+A
Sbjct: 218 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 275

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG       +  P+++ GL   V  ++ G  HS A+  DG ++ WG NS+GQ
Sbjct: 276 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
           LG G   A+  P P +V  L+ +    A     +LG   + S+A+   G V +WG   S 
Sbjct: 334 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G G  +         +  TP  + EL G    +  AG LH+  +  +G V+ +GD + 
Sbjct: 392 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 440

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++         +P  +S L     +  G  H+  + S G ++ WG N  G LGIG    
Sbjct: 441 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 500

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 386
              P +  G            SI  ++ G  H+ A+   G + TW            G +
Sbjct: 501 REIPVQATG----------LASISALAAGDSHSLALRGNGSVWTW------------GSN 538

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           + GQLG G  +D      V    ++ AL  + G +H+ AL
Sbjct: 539 AYGQLGDGTAIDRATAAQVPGLTDITAL--AAGNHHSLAL 576



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG+G   +R  PV  +     S+ ALA G +H+L L   G V+  G N +GQ
Sbjct: 485 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 542

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  +    ++ GL  ++  ++ G HHS A+  DG +++WG N  GQLG G   +
Sbjct: 543 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 600

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LS +   +A  G   SVAV   G V  WG    G+LG G          
Sbjct: 601 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 648

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS   P  +  L GV     A G  HS  +  +G ++ +G   V ++          P+
Sbjct: 649 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 705

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  G  H+  L + G ++ WG+N  G LG G+     +P +V G      
Sbjct: 706 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG------ 759

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                T+++ ++ G  +T A+ SE  +  W            G  S GQLG G       
Sbjct: 760 ----LTNVIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVTQKTT 803

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V+   +V AL  + G  H  AL
Sbjct: 804 PVQVSGLTDVTAL--AAGNAHALAL 826



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 19/296 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ D+G+LG G++ SR  PV  S     +++A+  G AH++ +   G V+  G NDFG
Sbjct: 584 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 641

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       ++ P+++SGL   V  ++ G +HS A+  DG L+ WG N+ GQLG G   
Sbjct: 642 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 699

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +   P +V  L+G+    A  G   S+A+   G V  WGA   G+LG G  +      
Sbjct: 700 --IQSTPAQVPGLTGVIALAAGNG--HSLALRTDGTVWGWGANSFGQLGDGTTTP----- 750

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           RST    P L        V    AG  ++  +     V+ +G ++  ++          P
Sbjct: 751 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 804

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             +S L     +  G  H   L +   ++ WG N+ G +G G+  ++ +P  V  P
Sbjct: 805 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 860



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 44/354 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG     + G G   +R  PV  S  E     AL  G  H + L   G V+A G N  GQ
Sbjct: 385 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 442

Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  E +     +P+++SGL   +  ++TG  HS A+  DG ++ WG N  GQLG+G  A
Sbjct: 443 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 499

Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            + IP+  T +  +S +     A G   S+A+ G G V +WG+   G+LG G        
Sbjct: 500 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 549

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            R+T+   P L        +   AAG  HS  +  +G V+++G     ++        + 
Sbjct: 550 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 603

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     V  G  H+  +   G ++ WG+N+ G LG G++     P +V G    
Sbjct: 604 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---- 659

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  T +  V+ G  H+ A+     L W W          G+++ GQLG+G
Sbjct: 660 ------LTGVTAVAVGVYHSLALRNDGTL-WAW----------GYNNVGQLGNG 696



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 153/349 (43%), Gaps = 49/349 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV        S+ A+A   AH+L L   G V+A G N +GQ
Sbjct: 168 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 225

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
           LG          P+++ GL   V  ++ G +        HS A+  DG ++ WG NS GQ
Sbjct: 226 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 283

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P    V+ L        A G   S+A+   G V +WG   SG+LG G  
Sbjct: 284 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 338

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
                   +T+  TP  +  L  V + +AA G          HS  +  +G V+ +G   
Sbjct: 339 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 389

Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             +  F +G  A R  P  +S+L     +V G  H  VL S G ++ WG N +G LG G 
Sbjct: 390 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 447

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
             V   P +V G            +I  ++ G  H+ A+ S+G I  WG
Sbjct: 448 TPVRAKPMQVSG----------LAAITALATGDGHSVAVGSDGGIWAWG 486



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 146/343 (42%), Gaps = 45/343 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV        S+ ALA G  H+L L + G V+A G N  GQ
Sbjct: 276 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
           LG          P+++ GL   V+ ++ G           HS A+  DG ++ WG N + 
Sbjct: 334 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           Q G G  A +  P+  +V  L+G     A  G   +V +   G V +WG   SG+LG G 
Sbjct: 392 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 446

Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
                         TP   K ++  G+    A A G  HS  +  +G ++ +GD    ++
Sbjct: 447 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 493

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                     P   + L     +  G  H+  L   G ++TWGSN  G LG G+     +
Sbjct: 494 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRAT 553

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
             +V G           T I  ++ G  H+ A+ ++G +  WG
Sbjct: 554 AAQVPG----------LTDITALAAGNHHSLALRNDGTVWVWG 586


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 168/349 (48%), Gaps = 45/349 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLGLG  +   +P +  A    ++  +ACG  HT  +T  G +Y    G+++ 
Sbjct: 300 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 359

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG+ +  +V  ++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 360 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 418

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K  K I  P +V+ L+G+ T   A G   + AV              GK+ +WG G   
Sbjct: 419 DK--KSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 476

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V+  G    
Sbjct: 477 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS--- 524

Query: 268 DKMLFQEGN-HA--RRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             +  Q GN HA  ++P L+  KL    +EEV CG YH  VLTS  E+YTWG   NG LG
Sbjct: 525 -SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLG 583

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            G ++   SP  V     ES  D+    + +++CG  ++AAI   K L+
Sbjct: 584 HGDVEDRKSPTLV-----ESLKDK---HVKIIACGSNYSAAICLHKSLS 624



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 171/370 (46%), Gaps = 52/370 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ-ISTGYH 133
           +ACG  H+  +T  G V+  G    G+LG+   +G  + +P  +  L    V  ++ G  
Sbjct: 281 IACGVRHSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEALAATTVDLVACGEF 338

Query: 134 HSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ A+T+DGELY WG   ++ G LG G   +  +P   ++   L G+     A G   + 
Sbjct: 339 HTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMP--KRISGILEGLQVAYVACGPWHTA 396

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            ++  G++ ++G G  G LGHG + SI           PR +  L G++    A G  H+
Sbjct: 397 LISSTGQLFTFGDGTFGVLGHGDKKSI---------SYPREVDSLTGLRTIAVACGVWHT 447

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGG 297
           A + E           +G+++ +GD   +++   +     +P+ +  L  Y+  ++ CG 
Sbjct: 448 AAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGH 507

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             T  LT+ G+++T GS+  G LG    D    P  V+          +  S   V+CG 
Sbjct: 508 SITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKL-------LGESAEEVACGA 559

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H   + S+ ++ TWG G +            G+LGHG+  D   PT+V   ++     +
Sbjct: 560 YHVMVLTSKNEVYTWGKGAN------------GRLGHGDVEDRKSPTLVESLKDKHVKII 607

Query: 417 SCGFNHTGAL 426
           +CG N++ A+
Sbjct: 608 ACGSNYSAAI 617



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 133/310 (42%), Gaps = 61/310 (19%)

Query: 142 GELYMWGK--NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           G++++WG+  + N       +A+ V     + +P  +E    +  +  A G   S  VT 
Sbjct: 234 GDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAIVTR 293

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG    GRLG       LG  +  ++  PRL++ L    V + A G  H+  + 
Sbjct: 294 QGEVFTWGEETGGRLG-------LGMGKDVTQ--PRLVEALAATTVDLVACGEFHTCAVT 344

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSG 306
            +G +Y +GD   +  L   G       P  IS      ++ Y   V CG +HT +++S 
Sbjct: 345 MDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAY---VACGPWHTALISST 401

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE 365
           G+L+T+G    G LG G    +  P           VD +     + V+CG  HTAA+ E
Sbjct: 402 GQLFTFGDGTFGVLGHGDKKSISYPRE---------VDSLTGLRTIAVACGVWHTAAVVE 452

Query: 366 ------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
                       GK+ TWG G  +            +LGHG+    + PT V    +   
Sbjct: 453 VIMTQSSTSIPSGKLFTWGDGDKN------------RLGHGDKEPRLKPTCVPALIDYNF 500

Query: 414 LQVSCGFNHT 423
            +++CG + T
Sbjct: 501 HKIACGHSIT 510



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 26/193 (13%)

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
           A G  HSA +   G V+ +G+    ++    G    +P L+  L  +  + V CG +HTC
Sbjct: 282 ACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTC 341

Query: 302 VLTSGGELYTWGS--NENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  GELYTWG   +  G LG G+ DV H  P+R+ G             +  V+CG  
Sbjct: 342 AVTMDGELYTWGDGVHNAGLLGNGT-DVSHWMPKRISGILE-------GLQVAYVACGPW 393

Query: 359 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HTA IS  G++ T+G     GTF        G LGHG+     +P  V+    ++ + V+
Sbjct: 394 HTALISSTGQLFTFG----DGTF--------GVLGHGDKKSISYPREVDSLTGLRTIAVA 441

Query: 418 CGFNHTGALLEYV 430
           CG  HT A++E +
Sbjct: 442 CGVWHTAAVVEVI 454



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 31/186 (16%)

Query: 254 DENGRVYIFGDRAVDKML----FQEGNHARRPSLISKLPYSEEVV-------CGGYHTCV 302
           D  G ++++G+   D  +     +  N + R  ++   P    +V       CG  H+ +
Sbjct: 231 DALGDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAI 290

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           +T  GE++TWG    G LG+G    +  P  V+            T++ LV+CG  HT A
Sbjct: 291 VTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEA--------LAATTVDLVACGEFHTCA 342

Query: 363 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGF 420
           ++ +G++ TWG          DG  + G LG+G DV +  P  I    E ++   V+CG 
Sbjct: 343 VTMDGELYTWG----------DGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 392

Query: 421 NHTGAL 426
            HT  +
Sbjct: 393 WHTALI 398


>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
 gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
          Length = 508

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 158/335 (47%), Gaps = 42/335 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+ +LG G+ E+R  PV      +  +KA+A GG  +L L + G V++ G ND+ Q
Sbjct: 202 WGRNDWAQLGDGTKETRHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQ 261

Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
           LG  +  G++    P+++ GL   V  +  G  HS A+  DG ++ WG    GQLG G  
Sbjct: 262 LGAGD-TGFNAHTIPVKVEGLSG-VTAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTN 319

Query: 160 ---KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
               AA V+P       LSG+  K  + G+  S+A+   G V SWG    G+LG G    
Sbjct: 320 SDHNAAAVVP------GLSGV--KAVSAGYRHSLALLRDGTVWSWGYNAQGQLGDGT--- 368

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLH----SACIDENGRVYIFGDRAVDKM 270
                 +T+  TP  +  L G    IAA  +   H    S  + E+G V+ +G    D  
Sbjct: 369 ------NTNRNTPVKVASLGGRVKAIAASSSNVFHDPSFSLALLEDGTVWSWGTN--DWH 420

Query: 271 LFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              +G +  R  P  +S L   + +  GG H+  L   G ++ WG+N++G +G G     
Sbjct: 421 QLGDGTNTSRNTPVKVSDLSGVKAIAPGGRHSLALLKDGTVWGWGANDHGQVGTGD---- 476

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            +P+R   P     ++ I     + + GW   AA+
Sbjct: 477 GTPDRYAAPVK---IEGISHVKAIAAGGWHSIAAL 508


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 179/403 (44%), Gaps = 45/403 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E R       A E  ++ ++  G  ++L +TE G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G +   S   P  ++ L+   V++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 388
            P++VQ    E         IV +SCG  H+ A+ S+G++ ++G  G HG     G+   
Sbjct: 293 VPQKVQLLSGE--------EIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL---GYGRK 340

Query: 389 GQLGHGNDVDYIHPTIVNFGENVK--ALQVSCGFNHTGALLEY 429
              G   +V    P      EN    A  V+CG  HT AL+++
Sbjct: 341 VTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 105/291 (36%), Gaps = 79/291 (27%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQES-----------------SILGFLRST---------- 224
           +  G  +++WG+G  G+LG G                    S++   R++          
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLF 60

Query: 225 -----------------SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                            SE  P  +K L  VK+  AA G  H   +D+ GR Y +G    
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 268 DKM---LFQEGNHARRPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNEN 317
            +      ++ N  R P     +P          +V  GG H+ VLT  G ++TWG    
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP-- 178

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
                G I  +  P RVQG             + L++ G  H  A+ E   L W W    
Sbjct: 179 --WPPGDITQISVPVRVQG----------LDMVRLIAVGAFHNLALQEDGTL-WAW---- 221

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 G++  GQLG G+      P  V     +  + ++ G  H+ AL +
Sbjct: 222 ------GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD 266


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 47  GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 36/308 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G HHS  +  +  +Y  G NS GQLG  +  +   P P  ++ L+ +     +
Sbjct: 23  ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E SVAV   GKV +WGAG  G+LG G+   I         + P  IK L G+K+   
Sbjct: 81  CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
           + G  HS  + E+G V+ +G  +  ++    G ++R  ++  K+   E     +V  GG 
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  L+  G  + WGSN +G L +    V    E++  P S   +  +  S++ +SCG++
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKV---KEQIYKPHSIGALKNL--SVIYISCGYE 245

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HTA ++ EG++ T+G G S G       S  GQ G         P ++  G   +  Q+ 
Sbjct: 246 HTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG---------PQLIE-GIGGRVSQIE 292

Query: 418 CGFNHTGA 425
           C   HT A
Sbjct: 293 CASYHTIA 300



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 147/312 (47%), Gaps = 29/312 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     VY+ G N +GQLG   +   +  P  I  L    V  +S G  HS
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  
Sbjct: 87  VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG    G+LG G+ S         S+  P+ +K LEG+ +   AAG  HS  +  
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197

Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
            G  + +G     ++    GN  +    +P  I  L     +   CG  HT VLT  G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEGK 367
           +T+G N +G L          P+ ++G         I   +  + C   HT A   + G+
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEG---------IGGRVSQIECASYHTIAYVYTTGQ 307

Query: 368 ILTWGWGGSHGT 379
           +++ G G SH +
Sbjct: 308 VVSLGRGPSHTS 319



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 98  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 39/263 (14%)

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           SGI   QAA G   S+ +    +V S G    G+LG           R  S   P  I+ 
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
           L  + V + + G  HS  +   G+V+ +G  +  ++    F+E +    P+ I  L   +
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICT 348
             +V CG YH+  L+  G +++WG N  G LG+G      + P++V+      P+ Q   
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQ--- 184

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIV 405
               V+ G  H+ A+S     ++GWG +            GQL   GN V      P  +
Sbjct: 185 ----VAAGGTHSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSI 229

Query: 406 NFGENVKALQVSCGFNHTGALLE 428
              +N+  + +SCG+ HT  L E
Sbjct: 230 GALKNLSVIYISCGYEHTAVLTE 252



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 26/204 (12%)

Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           PR +K    G+++  AA+G  HS  +  N RVY  GD +  ++  +      RP  I  L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
              + + V CG  H+  +   G+++ WG+   G LGIG   ++   P +++         
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-------- 123

Query: 345 QICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHP 402
                I+ VSCG  H+ A+SE G + +W            G +S GQLG G N      P
Sbjct: 124 LAGIKIIQVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIP 171

Query: 403 TIVNFGENVKALQVSCGFNHTGAL 426
             V   E +   QV+ G  H+ AL
Sbjct: 172 QKVKSLEGIPLAQVAAGGTHSFAL 195


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 149/324 (45%), Gaps = 33/324 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG    G+LGLG ++     +         H++K ++CG  HT+ L + G +Y+ G ND+
Sbjct: 4   WGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGSNDY 63

Query: 101 GQLGISENIGY-----SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GQ G   N        + E +RI+ +       S G +H+ AI     +Y WG NS+GQL
Sbjct: 64  GQTGRQRNNKRFARIDAFESMRITNVS------SNGANHNLAINDKNCIYAWGDNSDGQL 117

Query: 156 GLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           G+  +  K     P +++ LS     Q A G   S+AV   G V SWG+   G+LG    
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS- 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   + S   P+ I +L G  +   AAG  HS  I  +G +  +G  +  ++    
Sbjct: 177 --------NVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGT 228

Query: 275 GNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +    P+ +S L   +     CG  HT VLT  G ++T+G+  +G LG  S+    SP+
Sbjct: 229 NDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCSPQ 288

Query: 333 RVQGPFSESPVDQICTSIVLVSCG 356
            V        VD +   +  ++CG
Sbjct: 289 MV--------VDLMGIVVTQITCG 304



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 19/262 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQ 102
           G+ DYG+ G      R+  +   AFE   +  ++  GA H L + +  C+YA G N  GQ
Sbjct: 59  GSNDYGQTGRQRNNKRFARI--DAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQ 116

Query: 103 LGISE-NIG-YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+++ N+  +   P +I  L K  VVQ++ G  HS A+  DG ++ WG N  GQLG+  
Sbjct: 117 LGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             + V   P ++  LSG +  Q A G   S+A+T  G +L+WG    G+LG G    +L 
Sbjct: 177 NVSSV--EPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVL- 233

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   +P  +  L    +  AA G  H+A + + G V+ FG  +  ++     +H  
Sbjct: 234 --------SPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHC 285

Query: 280 RPSLISKLP--YSEEVVCGGYH 299
            P ++  L      ++ CG ++
Sbjct: 286 SPQMVVDLMGIVVTQITCGRFY 307



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 34/296 (11%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGF 186
           IS G +H+  +  DG++Y  G N  GQ G  +   +      +++    +  T  ++ G 
Sbjct: 39  ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRF----ARIDAFESMRITNVSSNGA 94

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             ++A+     + +WG    G+LG   + ++  F R     TPR IK L    V   A G
Sbjct: 95  NHNLAINDKNCIYAWGDNSDGQLG-VTDQNLKQFYR-----TPRQIKSLSKFAVVQVACG 148

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
             HS  +  +G V+ +G     ++       +  P  I KL   Y  ++  GG H+  +T
Sbjct: 149 QSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAIT 208

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           + G L TWG N  G LG+G+ D + SP  V    S+         I   +CG  HTA ++
Sbjct: 209 NSGALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRSQ--------HIAYAACGEDHTAVLT 260

Query: 365 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            EG + T+G G            S GQLGH +   +  P +V     +   Q++CG
Sbjct: 261 KEGGVFTFGAG------------SSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCG 304


>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 864

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 189/408 (46%), Gaps = 59/408 (14%)

Query: 6   LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC 65
           ++A++    +Q +  GS   +  R   + L       WG  + G+LG GS ++R  PV  
Sbjct: 56  ISALSLSNTQQGVSAGSYHSLLLRSTGAVL------AWGQNNSGQLGDGSTQNRTLPV-- 107

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---------SENIGYSLEPL 116
           +     S+KA++ GG+++L +   G V+A G N+ GQLG          SE   + + P+
Sbjct: 108 NVLGLPSIKAISAGGSYSLAVGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPV 167

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
            I  +      +S G +HS A+  DG+L+ WG N+ GQLG G  A ++ P+   +    G
Sbjct: 168 SIV-IPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGTTANRLAPVSVNIP--GG 224

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
                 A G+  S+A+   G+V +WG   SG++G+G  ++ L         TP ++    
Sbjct: 225 AIA--IAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQL---------TPVVVA-FP 272

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV 294
           G  + +A  G  HS  +  NG V+ +G  A +     +G++A R  P  +  +  + +V 
Sbjct: 273 GSAIAVAGGGS-HSLVVLSNGTVWSWG--ANNAGQLGDGSNATRVSPIQVPGIGVATKVA 329

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            GGY +  +TS G +++WG N  G LG GS+             S  PV    TS  L  
Sbjct: 330 AGGYFSLAITSDG-VWSWGQNTRGQLGNGSL-----------ANSSVPVFITATSNALAL 377

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
            G  H + I       W W          G ++ GQLG G  VD + P
Sbjct: 378 SGGYHHSLILRPGCPIWAW----------GFNAYGQLGDGTLVDRLAP 415



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 168/361 (46%), Gaps = 45/361 (12%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
            ++ + ++ G  H+L L  TG V A G N+ GQLG       +L P+ + GL   +  IS
Sbjct: 62  SNTQQGVSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTL-PVNVLGLPS-IKAIS 119

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIPIPTKVECLSGIFTKQAAL-- 184
            G  +S A+  DG+++ WG N++GQLG   LG   +       +V  +S +    AA   
Sbjct: 120 AGGSYSLAVGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAAVS 179

Query: 185 -GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   S+A+   GK+ +WGA   G+LG G          +T+     +   + G  + IA
Sbjct: 180 GGLNHSLALAKDGKLWAWGANTYGQLGDG----------TTANRLAPVSVNIPGGAIAIA 229

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-EVVCGGYHTCV 302
           A G+ HS  I  +GRV+ +G R     +   G   +   ++   P S   V  GG H+ V
Sbjct: 230 A-GWYHSLAIARDGRVWAWG-RNNSGQVGNGGTANQLTPVVVAFPGSAIAVAGGGSHSLV 287

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           + S G +++WG+N  G LG GS     SP +V G         I  +  + + G+   A 
Sbjct: 288 VLSNGTVWSWGANNAGQLGDGSNATRVSPIQVPG---------IGVATKVAAGGYFSLAI 338

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
            S+G    W W          G ++ GQLG+G+  +   P  +    N  AL +S G++H
Sbjct: 339 TSDG---VWSW----------GQNTRGQLGNGSLANSSVPVFITATSN--ALALSGGYHH 383

Query: 423 T 423
           +
Sbjct: 384 S 384



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 38/296 (12%)

Query: 117 RISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
            IS L     Q  +S G +HS  +   G +  WG+N++GQLG G    + +P+   V  L
Sbjct: 55  EISALSLSNTQQGVSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPV--NVLGL 112

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
             I  K  + G   S+AV   GKV +WGA  SG+LG G     LG  +S SEY    +  
Sbjct: 113 PSI--KAISAGGSYSLAVGADGKVWAWGANNSGQLGTG----YLGNGKSGSEYADFQVTP 166

Query: 235 LEGVKVKIAAA---GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYS 290
           +  V    AAA   G  HS  + ++G+++ +G     ++   +G  A R + +S  +P  
Sbjct: 167 VSIVIPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQL--GDGTTANRLAPVSVNIPGG 224

Query: 291 EEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
              +  G YH+  +   G ++ WG N +G +G G      +P  V  P S         +
Sbjct: 225 AIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQLTPVVVAFPGS---------A 275

Query: 350 IVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           I +   G      +S G + +W            G ++ GQLG G++   + P  V
Sbjct: 276 IAVAGGGSHSLVVLSNGTVWSW------------GANNAGQLGDGSNATRVSPIQV 319



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 5/129 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS  +R  P+        +   +A GG  +L +T  G V++ G N  GQ
Sbjct: 297 WGANNAGQLGDGSNATRVSPIQVPGIGVAT--KVAAGGYFSLAITSDG-VWSWGQNTRGQ 353

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + ++  S  P+ I+     +  +S GYHHS  +     ++ WG N+ GQLG G    
Sbjct: 354 LG-NGSLANSSVPVFITATSNALA-LSGGYHHSLILRPGCPIWAWGFNAYGQLGDGTLVD 411

Query: 163 KVIPIPTKV 171
           ++ P+  ++
Sbjct: 412 RLAPVQAEI 420


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 183/416 (43%), Gaps = 66/416 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +    V  A E +S++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P R+  L   ++ Q + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             +G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++    + P  ++ LE   V I A G  H+  ++E+GR+  +G+    ++   +
Sbjct: 177 PWPPGDIKQI--FVPVRVQGLE--NVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMV 292

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V     E         I+ VSCG  H+ A++ +G+I ++G  G H           G
Sbjct: 293 PQKVNLLAEE--------DIIQVSCGGTHSVALTRDGRIFSFG-RGDH-----------G 332

Query: 390 QLGHGNDVD---------YIHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 429
           +LG+G  V           I P   +F    +       A  ++CG  HT A++E+
Sbjct: 333 RLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVEW 388



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 110/285 (38%), Gaps = 80/285 (28%)

Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
           +++WG+G  G+LG G                                            +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 215 SSILGFLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
              LG    T +E  P  +K L  VK+  AA G  H   +D+ GR Y +G         +
Sbjct: 67  RGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  + G   RR  +I K    +    +V  GG H+ VLT  G ++TWG         G 
Sbjct: 127 PLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 182

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 383
           I  +  P RVQG            ++ +++ G  H  A+ E G++L W            
Sbjct: 183 IKQIFVPVRVQG----------LENVSIIAVGAFHNLALEEDGRLLAW------------ 220

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G++  GQLG G+     HP  V+  +++  + ++ G  H+ AL +
Sbjct: 221 GNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTD 265


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 110/212 (51%), Gaps = 16/212 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  DYG+LG+G       P     F +H + A+ACG  +T+     G V A G ND GQL
Sbjct: 197 GCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQL 256

Query: 104 GISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G+       L P R++  L + VV Q+S GYHH++ +T DG +Y +G+N  GQLGLG K 
Sbjct: 257 GLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKL 316

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P  VE LS +   Q A G   ++A++  GKV  +     GR  HGQ    LG  
Sbjct: 317 HMARPTP--VESLSRMRITQVACGCYHTLALSDDGKVFPF-----GRNNHGQ----LGLE 365

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            S    +P+LI  L     K  AAGF HS C+
Sbjct: 366 TSMDCLSPQLISTLRN---KPVAAGFYHSVCL 394



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 172/409 (42%), Gaps = 72/409 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
           +G   YG L LG    R  P        +  K    +ACG   T  L E G V+  G ND
Sbjct: 35  FGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCGYND 94

Query: 100 FGQ--LGISENIGYSLEPLRIS-GLKK-EVVQISTGY--HHSSAITVDGELYMWGKNSNG 153
            GQ  +G +E +      LR S GL     V++ +G    H +A+  +G LY  G N  G
Sbjct: 95  SGQCAIGTTERV----PSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRG 150

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGLG   A  +   T VE L+G      A  +  +  V   G + + G    G+LG G 
Sbjct: 151 QLGLG--TATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGD 208

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------D 264
            S  L          PR +       V   A G  ++     +G V  FG         D
Sbjct: 209 HSGHL---------VPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLD 259

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCL 320
           R  + +L         P+ ++  P    VV    CG +HT ++T  G +YT+G N+ G L
Sbjct: 260 RVSEPVLL--------PTRLAP-PLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQL 310

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
           G+G    +  P         +PV+ +    I  V+CG  HT A+S +GK+  +       
Sbjct: 311 GLGHKLHMARP---------TPVESLSRMRITQVACGCYHTLALSDDGKVFPF------- 354

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                G ++ GQLG    +D + P +++    ++   V+ GF H+  L+
Sbjct: 355 -----GRNNHGQLGLETSMDCLSPQLIS---TLRNKPVAAGFYHSVCLV 395



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 156/346 (45%), Gaps = 43/346 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRIS----GLKKEVVQISTGYHHSSAITVDGELYMW 147
           +++ G N +G+L + +    S  P R+        K VV ++ G   ++ +  +G+++  
Sbjct: 32  LFSFGQNTYGELALGDTNDRS-TPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTC 90

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGG 205
           G N +GQ  +G    + +P       LS   T +  +  G E   A+   G + + G   
Sbjct: 91  GYNDSGQCAIG--TTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNM 148

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-- 263
            G+LG G  +++       +E T  L++EL G +V   A  + H+A + +NG ++  G  
Sbjct: 149 RGQLGLGTATTV-------TEAT--LVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCN 199

Query: 264 DRAVDKMLFQEGNHARRP-SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           D     M    G+   RP     + P    V CG ++T      G +  +G N++G LG+
Sbjct: 200 DYGQLGMGDHSGHLVPRPVDYFFRHPVLA-VACGQHYTVASLRDGGVVAFGKNDHGQLGL 258

Query: 323 GSI-DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTF 380
             + + +  P R+  P   + V Q+       SCG+ HTA ++E G + T+G        
Sbjct: 259 DRVSEPVLLPTRLAPPLDRAVVPQL-------SCGYHHTAIVTEDGAVYTFG-------- 303

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                +  GQLG G+ +    PT V     ++  QV+CG  HT AL
Sbjct: 304 ----RNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLAL 345



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 41/295 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKVLS 200
           L+ +G+N+ G+L LG    +    PT+V+      TK     A G EQ+  +   G V +
Sbjct: 32  LFSFGQNTYGELALGDTNDR--STPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFT 89

Query: 201 WGAGGSGRLGHGQESSILGFLRS---TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
            G   SG+   G    +     S   +S +T RL           +  G  H A +  NG
Sbjct: 90  CGYNDSGQCAIGTTERVPSLRFSPGLSSHHTVRLF----------SGNGSEHLAALCANG 139

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
            +Y  G     ++           +L+ +L      +V C  +HT ++   G+L+  G N
Sbjct: 140 FLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCN 199

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCGWKHT-AAISEGKILTWGW 373
           + G LG+G     HS     G     PVD      VL V+CG  +T A++ +G ++ +G 
Sbjct: 200 DYGQLGMGD----HS-----GHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGK 250

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              HG    D  S    L        + P +    +     Q+SCG++HT  + E
Sbjct: 251 N-DHGQLGLDRVSEPVLLP-----TRLAPPL----DRAVVPQLSCGYHHTAIVTE 295


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 162/327 (49%), Gaps = 31/327 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG   +   P     F+K  +K ++       H+L LT TG VY+ G  D+
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   +    +  L    L  +VV+ +S GY HS+A+T DGELY WG    G+LG   
Sbjct: 512 GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDY 571

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
            ++K    PTKV+ +  +     A G   ++AV+  GK + S+G G +G+LGHG      
Sbjct: 572 TSSK--NFPTKVQSIESV--GLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGD----- 622

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               +  +  P++I+ L G+ ++  A G   S  +  +G++Y +G  A+      E   A
Sbjct: 623 ----TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYT-A 677

Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 335
            RP L+  L      ++ CG  H   LT   E+Y WG+N  G  G G +   +  P+RV 
Sbjct: 678 LRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVI 737

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAA 362
           G      +D +  S+  VS G  H+ A
Sbjct: 738 G------LDGV--SVHQVSAGTSHSVA 756



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 47/346 (13%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           G VY  G N   QL  +E     +   + S +  +  Q+  G   +  I  DG +   GK
Sbjct: 397 GEVYVWGSNCTHQL--AEGGQEKITTPKYSAVFTDCQQVEAGQFCTFLIYSDGTVGACGK 454

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGS 206
            S G+LGLG      +P   K       + K+  ++ G +  S+A+T  G+V SWG G  
Sbjct: 455 GSYGRLGLGDSNNCSVP---KKPLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           G+LGHG  S         ++  P+L+K  L G  VK  +AG+ HSA + E+G +Y +GD 
Sbjct: 512 GKLGHGTHS---------TQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDG 562

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGS 324
              ++     +    P+ +  +     V CGG HT  ++  G+ ++++G  ENG LG G 
Sbjct: 563 EFGRLGHDYTSSKNFPTKVQSIESVGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGD 622

Query: 325 IDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTF 380
            +    P   E + G +           I  V+CG + + A+ S G++  WG G   G  
Sbjct: 623 TNRQLKPKVIEALNGLY-----------IRKVACGSQSSLAVTSSGQLYAWGCGAILGCG 671

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           S              +   + P +V   ++ + + ++CG +H  AL
Sbjct: 672 SA-------------EYTALRPRLVEDLQSKRMVDIACGDSHVIAL 704



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 30/234 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P +V        +K ++ G  H+  +TE G +Y  G  +FG
Sbjct: 506 WGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFG 565

Query: 102 QLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLG 156
           +LG     S+N    ++ +   GL      ++ G  H+ A++ DG+ ++ +G   NG+LG
Sbjct: 566 RLGHDYTSSKNFPTKVQSIESVGL------VACGGSHTLAVSQDGKTIWSFGGGENGKLG 619

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G    ++   P  +E L+G++ ++ A G + S+AVT  G++ +WG G           +
Sbjct: 620 HGDTNRQL--KPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCG-----------A 666

Query: 217 ILGFLRSTSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           ILG    ++EYT   PRL+++L+  ++   A G  H   +     VY +G+ A+
Sbjct: 667 ILGC--GSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAM 718



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G G+ G+LG G    + +P V  A     ++ +ACG   +L +T +G +YA G      
Sbjct: 610 FGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILG 669

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G +E    +L P  +  L+ K +V I+ G  H  A+T + E+Y WG N+ GQ G G  A
Sbjct: 670 CGSAEYT--ALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG-HA 726

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
              I  P +V  L G+   Q + G   SVA T 
Sbjct: 727 QSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTA 759


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 179/403 (44%), Gaps = 45/403 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E R       A E  ++ ++  G  ++L +TE G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G +   S   P  ++ L+   V++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 388
            P++VQ    E         IV +SCG  H+ A+ S+G++ ++G  G HG     G+   
Sbjct: 293 VPQKVQLLSGE--------EIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL---GYGRK 340

Query: 389 GQLGHGNDVDYIHPTIVNFGENVK--ALQVSCGFNHTGALLEY 429
              G   +V    P      EN    A  V+CG  HT AL+++
Sbjct: 341 VTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 105/291 (36%), Gaps = 79/291 (27%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQES-----------------SILGFLRST---------- 224
           +  G  +++WG+G  G+LG G                    S++   R++          
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLF 60

Query: 225 -----------------SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                            SE  P  +K L  VK+  AA G  H   +D+ GR Y +G    
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 268 DKM---LFQEGNHARRPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNEN 317
            +      ++ N  R P     +P          +V  GG H+ VLT  G ++TWG    
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP-- 178

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
                G I  +  P RVQG             + L++ G  H  A+ E   L W W    
Sbjct: 179 --WPPGDITQISVPVRVQG----------LDMVRLIAVGAFHNLALQEDGTL-WAW---- 221

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 G++  GQLG G+      P  V     +  + ++ G  H+ AL +
Sbjct: 222 ------GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD 266


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 151/339 (44%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 178 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 237

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 238 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 296

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 297 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 354

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 355 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 404

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 405 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 464

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           I+    P +V+    +  V  I       +CG   TAAI
Sbjct: 465 IEDRKVPTQVEA-LKDRAVRHI-------ACGANFTAAI 495



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 164/372 (44%), Gaps = 60/372 (16%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 161 CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 217

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 218 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 275

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 276 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 326

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 327 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 384

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSC 355
              T  LT+ G++ + G++  G LG  + D         G       D+I    VL V+C
Sbjct: 385 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSD---------GRLPCLVEDRIAGEHVLQVAC 435

Query: 356 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H A ++   ++ TWG G +            G+LGHG+  D   PT V   ++    
Sbjct: 436 GSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVR 483

Query: 415 QVSCGFNHTGAL 426
            ++CG N T A+
Sbjct: 484 HIACGANFTAAI 495



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 133 IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 192

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 193 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 251

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           +R+ G     PV         VSCG  HTA I S G++ T+G G            S G 
Sbjct: 252 KRISGALDGLPV-------AYVSCGTWHTALITSMGQLFTFGDG------------SFGV 292

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 293 LGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 332


>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Nomascus leucogenys]
          Length = 704

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTRNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  H L  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWGKNS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAAVTEDGRLFMWGKNSEGQIGL--KNVPNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+L  G  S +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPSQLLGNHR-----TPQLVSEIPEKVIQVARGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +   G +YT+G++ +G LG+G
Sbjct: 310 IRDIGLMYTFGNSRHGKLGLG 330



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 42/308 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  +  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
               +  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++G  +  ++  +   +   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAAVTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+ G +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PSQLLGNHRTPQLVSEIPEKVIQVARGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGAL 426
           G NHT  +
Sbjct: 303 GENHTALI 310



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 37/313 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
               T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  ILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           AVT  G++  WG    G++G     ++           P+ +    G  V   + G+ HS
Sbjct: 154 AVTEDGRLFMWGKNSEGQIGLKNVPNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V  GG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPSQLLGNH-RTPQLVSEIPEKVIQVARGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I + 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALIRDI 313

Query: 366 GKILTWGWGGSHG 378
           G + T+G    HG
Sbjct: 314 GLMYTFG-NSRHG 325


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 185/410 (45%), Gaps = 54/410 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ + +    V  A E ++++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             + +   + I IP +  C   +  +Q A G   SV +T  G V SWG           +
Sbjct: 130 DEMERPLRRDIVIPKR--CAPKLVVRQVAAGGTHSVVLTREGHVWSWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  ++ENG ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V     E         I+ VSCG  H+ A++ +G+I ++G  G HG         G 
Sbjct: 293 PQKVNLLAGE--------DIIQVSCGGTHSVALTRDGRIFSFG-RGDHGRL-----GCGR 338

Query: 390 QLGHGNDVDY---IHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 429
           ++  G  +D    I P    F +  +       A  V+CG  HT A++E+
Sbjct: 339 KVTTGQPLDVPVKIPPPEGQFNDAAEDDDGKWVAKVVACGGRHTLAIVEW 388



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 105/328 (32%), Gaps = 116/328 (35%)

Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
           V++WG+G  G+LG G                                            +
Sbjct: 7   VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66

Query: 215 SSILGFLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------- 263
              LG    T +E  P  +K L  VK+  AA G  H   +D+ GR Y +G          
Sbjct: 67  RGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 264 -----------------DRAVDKMLFQE----GNHA------------------------ 278
                             R   K++ ++    G H+                        
Sbjct: 127 PGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQPWPPGDIKQI 186

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +  L     +  G +H   L   G L+ WG+NE G LG G       P  VQG  
Sbjct: 187 SIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLD 246

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
           S + VD       + + GW  TA   +G++  WG  G HG             G  +   
Sbjct: 247 SLTLVD-------IAAGGWHSTALTDKGEVYGWG-RGEHGRLG---------FGDNDKSS 289

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGAL 426
            + P  VN       +QVSCG  H+ AL
Sbjct: 290 KMLPQKVNLLAGEDIIQVSCGGTHSVAL 317


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  121 bits (304), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 89/287 (31%), Positives = 148/287 (51%), Gaps = 22/287 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
           G G +G+LGLG   S+      + F ++  +  +  G+  HTL LT+ G VY+ G  +FG
Sbjct: 393 GKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFG 452

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   N+     P  I G+ K +++  IS G  HS+AIT DG+LY WG+  +G+LG G 
Sbjct: 453 KLG-HGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGD 511

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
            + +   +PT V  +      Q A G   +V ++     V ++GAG +G+LGHG      
Sbjct: 512 SSIQ--RVPTLVRSIDA--ASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGN----- 562

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               +  EY P+++  L+G+++K  AAG   S  +   G +Y++G      +   +  H 
Sbjct: 563 ----TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHL 618

Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             P ++  L   +  ++  G  H   L++  E+Y+WG+N  G  G+G
Sbjct: 619 -LPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLG 664



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 93/348 (26%), Positives = 156/348 (44%), Gaps = 57/348 (16%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           YA G N   QL +  N    L P +    K   +Q+  G + + A+  DG L+  GK S+
Sbjct: 340 YAWGSNSSHQL-VEGNKDKILTPKKNDAFKN-AIQLEAGQYCTFALFDDGSLHACGKGSH 397

Query: 153 GQLGLGKKAAKVIPIPTKVECLS--GIFTKQ-----AALGFE-QSVAVTGGGKVLSWGAG 204
           G+LGLG  ++K        +CL    +F +      ++ G +  ++A+T  G V SWG G
Sbjct: 398 GKLGLGDSSSK--------QCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDG 449

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV----KVKIAAAGFLHSACIDENGRVY 260
             G+LGHG  +            T +L K + GV     +   +AG  HSA I ++G +Y
Sbjct: 450 EFGKLGHGNVA------------TQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLY 497

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG-ELYTWGSNENGC 319
            +G+    ++   + +  R P+L+  +  + +V  G  HT VL+     ++T+G+ +NG 
Sbjct: 498 TWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGK 557

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHG 378
           LG G+  + + P+ V               I  ++ G + + A++  G I  WG G   G
Sbjct: 558 LGHGNTKMEYYPKIVDALKG--------IRIKKIAAGTQCSIALTWTGFIYVWGCGPCLG 609

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             + D               ++ P IV    +V  + +S G  H  AL
Sbjct: 610 VGAADAV-------------HLLPKIVESLRDVHIVDISLGDCHCLAL 644



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 24/228 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+G++G+LG G++ ++  P V+   F+   +  ++ G  H+  +T+ G +Y  G  + G
Sbjct: 446 WGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHG 505

Query: 102 QLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMW--GKNSNGQLG 156
           +LG  ++   S++  R+  L + +    Q++ G  H+  ++ D E+ +W  G   NG+LG
Sbjct: 506 RLGHGDS---SIQ--RVPTLVRSIDAASQVAAGCSHTVVLSKD-EMTVWTFGAGDNGKLG 559

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G    K+   P  V+ L GI  K+ A G + S+A+T  G +  WG G    LG G   +
Sbjct: 560 HGN--TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC--LGVGAADA 615

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
           +           P++++ L  V +   + G  H   +  +  VY +G+
Sbjct: 616 V--------HLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGN 655



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 75/290 (25%), Positives = 124/290 (42%), Gaps = 40/290 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           E Y WG NS+ QL  G K    I  P K +        +A  G   + A+   G + + G
Sbjct: 338 EAYAWGSNSSHQLVEGNKDK--ILTPKKNDAFKNAIQLEA--GQYCTFALFDDGSLHACG 393

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G  G+LG G  SS    L   + +   +       ++  +     H+  + +NG VY +
Sbjct: 394 KGSHGKLGLGDSSS-KQCLHKLNLFNQNID------QISSSKGSDSHTLALTKNGVVYSW 446

Query: 263 GDRAVDKMLFQEGNHA--RRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNE 316
           GD    K+    GN A  + P +I  + +  +++     G  H+  +T  G+LYTWG  E
Sbjct: 447 GDGEFGKL--GHGNVATQKLPKVIRGV-FKNQIITFISAGSRHSAAITKDGDLYTWGEGE 503

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
           +G LG G   +   P  V+   + S           V+ G  HT  +S+ ++  W +G  
Sbjct: 504 HGRLGHGDSSIQRVPTLVRSIDAASQ----------VAAGCSHTVVLSKDEMTVWTFGA- 552

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                       G+LGHGN     +P IV+  + ++  +++ G   + AL
Sbjct: 553 ---------GDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIAL 593


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    ++  +P    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 46  GDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +L P+RI  L   +++Q+S G++HS A++ DG+++ WGKNS GQLGLG +++
Sbjct: 106 GIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSS 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV  L GI   Q A G   S A++  G    WG+   G+L    E+S +   +
Sbjct: 166 SQAS-PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISK 224

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 225 ------PHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQ 278

Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
           L+  +     ++ CG YHT   V T+G
Sbjct: 279 LVEGIKGQVSKIECGSYHTIAYVYTTG 305



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 149/310 (48%), Gaps = 35/310 (11%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           A G  H+L L     VY+ G N  GQLG   E      EP++  G   ++  +S G  HS
Sbjct: 27  ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALG-TLDIDLVSCGKEHS 85

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++  +P +++ L GI   Q + G   S+A++  
Sbjct: 86  IAVCHKGRVFAWGAGSEGQLGIGE-FKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSED 144

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    G+LG G +SS        S+ +P+ +  LEG+ +   AAG  HS  +  
Sbjct: 145 GQVFSWGKNSQGQLGLGMQSS--------SQASPQKVTSLEGIPLAQVAAGGSHSFALSL 196

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSG 306
            G  Y +G  +V ++     N   +   ISK P+S +         + CG  HT VLT  
Sbjct: 197 TGTSYGWGSNSVGQLALSGENSTVQ---ISK-PHSIDALKNLGVIYISCGYEHTAVLTKD 252

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--IS 364
           G+++T+G N +G L          P+ V+G         I   +  + CG  HT A   +
Sbjct: 253 GQVFTFGDNSSGQLQNNPRGKRRGPQLVEG---------IKGQVSKIECGSYHTIAYVYT 303

Query: 365 EGKILTWGWG 374
            G++++ G G
Sbjct: 304 TGQVVSLGHG 313



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 25/291 (8%)

Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
           S +P R++G    E++Q ++G  HS  +  +  +Y  G NS GQLG  ++     P P  
Sbjct: 9   SRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEP-- 66

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           ++ L  +     + G E S+AV   G+V +WGAG  G+LG G+   I           P 
Sbjct: 67  IQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEI--------NLMPM 118

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL-- 287
            IK L G+K+   + G  HS  + E+G+V+ +G  +  ++ L  + +    P  ++ L  
Sbjct: 119 RIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEG 178

Query: 288 -PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
            P + +V  GG H+  L+  G  Y WGSN  G L +   +   S  ++  P S   +  +
Sbjct: 179 IPLA-QVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGEN---STVQISKPHSIDALKNL 234

Query: 347 CTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED--GHSSGGQLGHG 394
              ++ +SCG++HTA ++ +G++ T+G   S G    +  G   G QL  G
Sbjct: 235 --GVIYISCGYEHTAVLTKDGQVFTFG-DNSSGQLQNNPRGKRRGPQLVEG 282



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E    P+         +  ++CG  H+L L+E G V++ 
Sbjct: 93  RVFA--WGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSW 150

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+         P +++ L+   + Q++ G  HS A+++ G  Y WG NS GQ
Sbjct: 151 GKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQ 210

Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L G+ +   I  P  ++ L  +     + G+E +  +T  G+V ++G   SG+L +  
Sbjct: 211 LALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNP 270

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                G         P+L++ ++G   KI    +   A +   G+V   G
Sbjct: 271 RGKRRG---------PQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 35/266 (13%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++    G+   QAA G   S+ +    +V S G    G+LG  +E +           
Sbjct: 12  PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNT---------E 62

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLI 284
            P  I+ L  + + + + G  HS  +   GRV+ +G  +  ++    F+E N    P  I
Sbjct: 63  QPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEIN--LMPMRI 120

Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSES 341
             L   +  +V CG YH+  L+  G++++WG N  G LG+G       SP++V       
Sbjct: 121 KTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTS-LEGI 179

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGHSSGGQLGHGNDVDYI 400
           P+ Q       V+ G  H+ A+S     ++GWG  S G  +  G +S  Q+   + +D +
Sbjct: 180 PLAQ-------VAAGGSHSFALSLTGT-SYGWGSNSVGQLALSGENSTVQISKPHSIDAL 231

Query: 401 HPTIVNFGENVKALQVSCGFNHTGAL 426
                   +N+  + +SCG+ HT  L
Sbjct: 232 --------KNLGVIYISCGYEHTAVL 249



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 26/141 (18%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-SI 350
           +   G  H+ +L S   +Y+ G N  G LG          +R Q      P+  + T  I
Sbjct: 25  QAASGERHSLLLFSNHRVYSCGDNSLGQLG---------QKREQNTEQPEPIQALGTLDI 75

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNF 407
            LVSCG +H+ A+  +G++  WG G            S GQLG G   +++ +   I   
Sbjct: 76  DLVSCGKEHSIAVCHKGRVFAWGAG------------SEGQLGIGEFKEINLMPMRIKTL 123

Query: 408 GENVKALQVSCGFNHTGALLE 428
           G  +K +QVSCG  H+ AL E
Sbjct: 124 G-GIKIIQVSCGHYHSLALSE 143


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 10/268 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+  +G+LG   ++ + +P    A E   +  ++CG  H+L +   G V+A G    GQ
Sbjct: 47  YGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQ 106

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI E    +L P +I  L   +++Q+S G+HHS A++ DG L+ WG NS+GQLGLGK+ 
Sbjct: 107 LGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKEC 166

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P +V+ L GI   Q A G   S A++  G    WG+   G+L   +++  +  +
Sbjct: 167 PSQAS-PQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKN--VPVV 223

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           +S+    P  +  LE + V   + G+ H+A + + G+V+ FG  +  ++ +        P
Sbjct: 224 QSSK---PCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGP 280

Query: 282 SLISKLP-YSEEVVCGGYHTC--VLTSG 306
            L+  +     ++ CG YHT   V T+G
Sbjct: 281 QLVEGIDGLVSQIDCGSYHTLAYVYTTG 308



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 157/314 (50%), Gaps = 34/314 (10%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           L+  A G  H+L L   G +++ G N  GQLG   ++    +P RI  L+   V  +S G
Sbjct: 25  LRQAASGERHSLLLLSNGELHSYGDNSHGQLG-RRDVQRQEQPKRIPALETLRVDLVSCG 83

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+   ++  IP K++ L+ I   Q + G   S+A
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G++ +WG+   G+LG G+E          S+ +P+ ++ L+G+ +   AAG  HS 
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECP--------SQASPQRVQFLDGIPLTQVAAGGAHSF 194

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCV 302
            +  +G  + +G  +  ++  ++ N    P + S  P S +         + CG  HT V
Sbjct: 195 ALSLSGASFGWGSNSEGQLALRKKN---VPVVQSSKPCSVDALENLGVVYISCGYEHTAV 251

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           LT  G+++T+G N  G LG         P+ V+G      +D + + I    CG  HT A
Sbjct: 252 LTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG------IDGLVSQI---DCGSYHTLA 302

Query: 363 --ISEGKILTWGWG 374
              + GK++++G G
Sbjct: 303 YVYTTGKVVSFGRG 316



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 145/282 (51%), Gaps = 27/282 (9%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  +GEL+ +G NS+GQ  LG++  +    P ++  L  +     +
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQPKRIPALETLRVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+ + I           PR IK L  +K+   
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEI--------NLIPRKIKTLTDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + E+GR++ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLT-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
           +  L+  G  + WGSN  G L +   ++ V+ S +    P S   ++ +   +V +SCG+
Sbjct: 193 SFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSK----PCSVDALENL--GVVYISCGY 246

Query: 358 KHTAAISE-GKILTWGWGGSHGT--FSEDGHSSGGQLGHGND 396
           +HTA +++ GK+ T+G G S+G   +S      G QL  G D
Sbjct: 247 EHTAVLTQTGKVFTFG-GNSYGQLGYSPTAGKEGPQLVEGID 287



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 36/257 (14%)

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +QAA G   S+ +   G++ S+G    G+LG               +  P+ I  LE ++
Sbjct: 26  RQAASGERHSLLLLSNGELHSYGDNSHGQLGRRD---------VQRQEQPKRIPALETLR 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSE--EVVCG 296
           V + + G  HS  +   GRV+ +G  +  ++   E N     P  I  L   +  +V CG
Sbjct: 77  VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCG 136

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
            +H+  L+  G L+TWGSN +G LG+G       SP+RVQ       +D I   +  V+ 
Sbjct: 137 HHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQF------LDGI--PLTQVAA 188

Query: 356 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDYIH---PTIVNFGENV 411
           G  H+ A+S     ++GWG           +S GQL     +V  +    P  V+  EN+
Sbjct: 189 GGAHSFALSLSGA-SFGWGS----------NSEGQLALRKKNVPVVQSSKPCSVDALENL 237

Query: 412 KALQVSCGFNHTGALLE 428
             + +SCG+ HT  L +
Sbjct: 238 GVVYISCGYEHTAVLTQ 254


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 175/400 (43%), Gaps = 57/400 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
           WG+  YG+LG G+   R  PV         + ALA GG        AH+L L   G V+A
Sbjct: 217 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 274

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG       +  P+++ GL   V  ++ G  HS A+  DG ++ WG NS+GQ
Sbjct: 275 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
           LG G   A+  P P +V  L+ +    A     +LG   + S+A+   G V +WG   S 
Sbjct: 333 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G G  +         +  TP  + EL G    +  AG LH+  +  +G V+ +GD + 
Sbjct: 391 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 439

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++         +P  +S L     +  G  H+  + S G ++ WG N  G LGIG    
Sbjct: 440 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 499

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 386
              P +  G            SI  ++ G  H+ A+   G + TW            G +
Sbjct: 500 REIPVQATG----------LASISALAAGDSHSLALRGNGSVWTW------------GSN 537

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           + GQLG G  +D      V    ++ AL  + G +H+ AL
Sbjct: 538 AYGQLGDGTAIDRATAAQVPGLTDITAL--AAGNHHSLAL 575



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG+G   +R  PV  +     S+ ALA G +H+L L   G V+  G N +GQ
Sbjct: 484 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 541

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  +    ++ GL  ++  ++ G HHS A+  DG +++WG N  GQLG G   +
Sbjct: 542 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 599

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LS +   +A  G   SVAV   G V  WG    G+LG G          
Sbjct: 600 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 647

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS   P  +  L GV     A G  HS  +  +G ++ +G   V ++          P+
Sbjct: 648 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 704

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  G  H+  L + G ++ WG+N  G LG G+     +P +V G      
Sbjct: 705 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG------ 758

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                T+++ ++ G  +T A+ SE  +  W            G  S GQLG G       
Sbjct: 759 ----LTNVIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVTQKTT 802

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P  V+   +V AL  + G  H  AL
Sbjct: 803 PVQVSGLTDVTAL--AAGNAHALAL 825



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 19/296 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ D+G+LG G++ SR  PV  S     +++A+  G AH++ +   G V+  G NDFG
Sbjct: 583 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 640

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       ++ P+++SGL   V  ++ G +HS A+  DG L+ WG N+ GQLG G   
Sbjct: 641 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 698

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +   P +V  L+G+    A  G   S+A+   G V  WGA   G+LG G  +      
Sbjct: 699 --IQSTPAQVPGLTGVIALAAGNG--HSLALRTDGTVWGWGANSFGQLGDGTTTP----- 749

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           RST    P L        V    AG  ++  +     V+ +G ++  ++          P
Sbjct: 750 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 803

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             +S L     +  G  H   L +   ++ WG N+ G +G G+  ++ +P  V  P
Sbjct: 804 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 859



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 44/354 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG     + G G   +R  PV  S  E     AL  G  H + L   G V+A G N  GQ
Sbjct: 384 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 441

Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  E +     +P+++SGL   +  ++TG  HS A+  DG ++ WG N  GQLG+G  A
Sbjct: 442 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 498

Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            + IP+  T +  +S +     A G   S+A+ G G V +WG+   G+LG G        
Sbjct: 499 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 548

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            R+T+   P L        +   AAG  HS  +  +G V+++G     ++        + 
Sbjct: 549 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 602

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     V  G  H+  +   G ++ WG+N+ G LG G++     P +V G    
Sbjct: 603 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---- 658

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  T +  V+ G  H+ A+     L W W          G+++ GQLG+G
Sbjct: 659 ------LTGVTAVAVGVYHSLALRNDGTL-WAW----------GYNNVGQLGNG 695



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 153/349 (43%), Gaps = 49/349 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV        S+ A+A   AH+L L   G V+A G N +GQ
Sbjct: 167 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 224

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
           LG          P+++ GL   V  ++ G +        HS A+  DG ++ WG NS GQ
Sbjct: 225 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 282

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P    V+ L        A G   S+A+   G V +WG   SG+LG G  
Sbjct: 283 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 337

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
                   +T+  TP  +  L  V + +AA G          HS  +  +G V+ +G   
Sbjct: 338 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 388

Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             +  F +G  A R  P  +S+L     +V G  H  VL S G ++ WG N +G LG G 
Sbjct: 389 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 446

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
             V   P +V G            +I  ++ G  H+ A+ S+G I  WG
Sbjct: 447 TPVRAKPMQVSG----------LAAITALATGDGHSVAVGSDGGIWAWG 485



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 146/343 (42%), Gaps = 45/343 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV        S+ ALA G  H+L L + G V+A G N  GQ
Sbjct: 275 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
           LG          P+++ GL   V+ ++ G           HS A+  DG ++ WG N + 
Sbjct: 333 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           Q G G  A +  P+  +V  L+G     A  G   +V +   G V +WG   SG+LG G 
Sbjct: 391 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 445

Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
                         TP   K ++  G+    A A G  HS  +  +G ++ +GD    ++
Sbjct: 446 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 492

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                     P   + L     +  G  H+  L   G ++TWGSN  G LG G+     +
Sbjct: 493 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRAT 552

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
             +V G           T I  ++ G  H+ A+ ++G +  WG
Sbjct: 553 AAQVPG----------LTDITALAAGNHHSLALRNDGTVWVWG 585


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 159/341 (46%), Gaps = 37/341 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  S ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 286 WGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNA 345

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R+SG  +  +V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 346 GLLGHGSTVSHWI-PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHG 404

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
            +  + I  P +VE L G+ T   + G   S AV            GK+ +WG G   RL
Sbjct: 405 NR--ETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRL 462

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  S+ L          P  +  L       +A G   +  +  +G ++  G  +V  
Sbjct: 463 GHGDRSAKL---------KPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGS-SVYG 512

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+          EV CG YH  VLT+ GE+YTWG   NG LG G I 
Sbjct: 513 QLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIA 572

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
               P  V     E+  D+   S+  ++CG   TAAIS+ K
Sbjct: 573 DRKVPTLV-----EALRDR---SVKRIACGSSFTAAISQHK 605



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 130/289 (44%), Gaps = 56/289 (19%)

Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           G++Y+WG+          S+G +  G  A   I +P  +E    +     A G + +  +
Sbjct: 219 GDVYVWGEVMCDTTSRSGSDGNVH-GPGATTDILVPKPLESNVMLDVSYVACGVKHAALI 277

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T   +V +WG   SGRLGHG  +SI         + PRL++ L    V+I A G  H+  
Sbjct: 278 TRQAEVFTWGEECSGRLGHGAGTSI---------FQPRLLESLSICNVEIIACGEFHTCA 328

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSG 306
           +   G +Y +GD   +  L   G+      P  +S  P        V CG +HT ++TS 
Sbjct: 329 VTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSG-PLEGLQVSTVSCGTWHTALITSS 387

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--- 363
           G+LYT+G    G LG G+ + +  P+ V+       +  + T  + VSCG  H+AA+   
Sbjct: 388 GQLYTFGDGTFGALGHGNRETISYPKEVES------LKGLRT--ISVSCGVWHSAAVVEV 439

Query: 364 -------SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
                  S GK+ TWG G  +            +LGHG+    + PT V
Sbjct: 440 IMTQSNASSGKLFTWGDGDKY------------RLGHGDRSAKLKPTCV 476



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 170/374 (45%), Gaps = 56/374 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQI-STGYH 133
           +ACG  H   +T    V+  G    G+LG     G S+ +P  +  L    V+I + G  
Sbjct: 267 VACGVKHAALITRQAEVFTWGEECSGRLG--HGAGTSIFQPRLLESLSICNVEIIACGEF 324

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
           H+ A+T  G+LY WG  ++    LG  +     IP +V   L G+     + G   +  +
Sbjct: 325 HTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALI 384

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG         R T  Y P+ ++ L+G++    + G  HSA 
Sbjct: 385 TSSGQLYTFGDGTFGALGHGN--------RETISY-PKEVESLKGLRTISVSCGVWHSAA 435

Query: 253 IDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEVVCG 296
           + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  +  CG
Sbjct: 436 VVEVIMTQSNASSGKLFTWGDG--DKYRLGHGDRSAKLKPTCVPSLID---YNFHKSACG 490

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              T  LT+ G ++T GS+  G LG  + D  + P  V+              +V V+CG
Sbjct: 491 HTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGRY-PRLVED-------KVGGGGVVEVACG 542

Query: 357 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A ++  G++ TWG G +            G+LGHG+  D   PT+V    +    +
Sbjct: 543 SYHVAVLTNTGEVYTWGKGAN------------GRLGHGDIADRKVPTLVEALRDRSVKR 590

Query: 416 VSCGFNHTGALLEY 429
           ++CG + T A+ ++
Sbjct: 591 IACGSSFTAAISQH 604



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 24/224 (10%)

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G + ++ G   +T    P+ ++    + V   A G  H+A I     V+ +G+    ++ 
Sbjct: 236 GSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLG 295

Query: 272 FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDV 327
              G    +P L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS   
Sbjct: 296 HGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVS 355

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 386
              P+RV GP            +  VSCG  HTA I S G++ T+G     GTF      
Sbjct: 356 HWIPKRVSGPLE-------GLQVSTVSCGTWHTALITSSGQLYTFG----DGTF------ 398

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
             G LGHGN     +P  V   + ++ + VSCG  H+ A++E +
Sbjct: 399 --GALGHGNRETISYPKEVESLKGLRTISVSCGVWHSAAVVEVI 440


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 155/340 (45%), Gaps = 40/340 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 339 WGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNF 398

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ ++  G+L+ +G  + G LG G
Sbjct: 399 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHG 457

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K I +P +VE L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 458 DR--KSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 515

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +     +G VY  G   
Sbjct: 516 GRLGHGDKEAKL---------VPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGS-P 565

Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           V   L    +  + P+ +  KL  S  EE+ CG YH  VLTS  E+YTWG   NG LG G
Sbjct: 566 VYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 625

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             D  + P  V     E+  D+   SI   +CG   TAAI
Sbjct: 626 DTDDKNLPSLV-----EALKDKQVKSI---ACGTNFTAAI 657



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 180/377 (47%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPQLIEALSNTNIEFVA 373

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 374 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 431

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  V+  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G
Sbjct: 432 WHTAVVSSAGQLFTFGDGTFGVLGHGDRKSI---------SLPREVESLKGLRTVQAACG 482

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ +S L  P  
Sbjct: 483 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVSALVEPNF 540

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   T   T+ G +YT GS   G LG    D    P RV+G  S S V++I    
Sbjct: 541 CQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDG-KLPARVEGKLSRSSVEEI---- 595

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S+ ++ TWG G +            G+LGHG+  D   P++V   +
Sbjct: 596 ---ACGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDKNLPSLVEALK 640

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   ++CG N T A+
Sbjct: 641 DKQVKSIACGTNFTAAI 657



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 31/269 (11%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G++ SWG    GRLGHG +S +L        
Sbjct: 305 LPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 356

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI+ L    ++  A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 357 -HPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 415

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V++S G+L+T+G    G LG G    +  P  V+      
Sbjct: 416 NGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLR 475

Query: 342 PVDQIC-----TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            V   C      ++V V  G   ++  S GK+ TWG G              G+LGHG+ 
Sbjct: 476 TVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGDK 523

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGA 425
              + PT V+        QV+CG + T A
Sbjct: 524 EAKLVPTCVSALVEPNFCQVACGHSLTIA 552



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 366 NTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 424

Query: 344 DQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA +S  G++ T+G     GTF        G LGHG+      P
Sbjct: 425 SSI-------SCGPWHTAVVSSAGQLFTFG----DGTF--------GVLGHGDRKSISLP 465

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ +Q +CG  HT A++E +
Sbjct: 466 REVESLKGLRTVQAACGVWHTAAVVEVM 493


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 190/436 (43%), Gaps = 54/436 (12%)

Query: 12  YYLKQDIKLGSK-----LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
           Y L Q+ +  SK     +G+ +  +    Q  ++  WG G   +LG G LE    P +  
Sbjct: 199 YELLQEYRASSKETMSMVGLREVVVDDVEQELWS--WGAGTDAQLGTGRLEDNNLPQLVR 256

Query: 67  AFEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
                S  A   L+CGGAH + LT  G V   G  + GQLG+ + I  SL P  +  L  
Sbjct: 257 TPSLSSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMIS-SLHPKPVMRLGS 315

Query: 124 E-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
             +  +S G+ HS  ++ +G+LY  G  S GQLG G    +    P +V   S     + 
Sbjct: 316 YFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRC--FPEEVLFFSDKHVDKI 373

Query: 183 ALGFEQSVAV---TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           A G   S+A+   + G +V  +GAG  G+LG  ++   +          P L   LE  +
Sbjct: 374 ACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNL--------PILSSNLEAAE 425

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           +   AAG  HSA +   G +Y +G             H   PS  SK      V  G  H
Sbjct: 426 IVGIAAGGDHSAALSAEGHLYTWGRGFKSTSDVYSPQHLPSPSSFSK------VALGWNH 479

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT----SIVLVSC 355
             VLT  GELY  G   +G L     ++L+S + + G   E     +       ++ ++ 
Sbjct: 480 ALVLTDEGELYMLGGKHHGAL--SDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAA 537

Query: 356 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA- 413
           G +H+  ++E G + TWGWG              GQLG G+  D+ +P  VN    +++ 
Sbjct: 538 GAEHSVIVTEDGGVKTWGWG------------EHGQLGLGDTCDHTNPQTVNLNLKLEST 585

Query: 414 ---LQVSCGFNHTGAL 426
              ++V CG   T A+
Sbjct: 586 AYDVKVYCGSGFTVAV 601



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 26/153 (16%)

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGP 337
           R PSL S  P    + CGG H   LT+GG + TWG   +G LG+G  I  LH        
Sbjct: 256 RTPSL-SSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLH-------- 306

Query: 338 FSESPVDQICTSIVL-VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
               PV ++ +  +  VS GW H+  +S EGK+ T G G            S GQLGHG+
Sbjct: 307 --PKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCGDG------------SFGQLGHGD 352

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 P  V F  +    +++CG  H+ AL++
Sbjct: 353 YQLRCFPEEVLFFSDKHVDKIACGMRHSLALVK 385


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 169/370 (45%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E+     P          ++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 6   WGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  VV QI+ G  HS A+T  G++  WG N  GQ+G   
Sbjct: 66  HQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-HS 121

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               VI +P  +  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 122 TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-- 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  + G+ +   A G  HS  I ++  V+ +G     ++   +  +  
Sbjct: 180 ----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA 235

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            PS +  +       V CG  ++  LT+ G ++T G+   G LG G+ +    P  V   
Sbjct: 236 YPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMV--- 292

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + ++I  V+CG +HT A+  S G++ ++G G S            GQLG  N
Sbjct: 293 -----IELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS------------GQLGTRN 335

Query: 396 DVDYIHPTIV 405
            +    P +V
Sbjct: 336 TISQTLPKVV 345



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 20/301 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D+ +LG   L ++ RP+     + + +  +ACG  H++ LTE G + + G ND GQ+
Sbjct: 61  GNNDHHQLG-HELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 104 GIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G S +N    L  +    + + VVQI+ G +HS A+T  GELY WG N  GQLG+  ++ 
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSP 176

Query: 163 KVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K +P    P ++  + GI     A G   S  ++    V  WG    G+LG   E     
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ---- 232

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                +   P  +K +  + V+    G  +S  +   G V+  G     ++     N+  
Sbjct: 233 -----NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEM 287

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P ++ +L  S   +V CG  HT  L  SGG +Y++G   +G LG  +      P+ V G
Sbjct: 288 IPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIG 347

Query: 337 P 337
           P
Sbjct: 348 P 348



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 36/282 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG  S+GQLGLG    + I +P+++E       +Q A G   ++ +T  G+V + G 
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               +LGH   +             P  I EL+   V   A G  HS  + E G++  +G
Sbjct: 63  NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
           D    ++     N       I +   S  VV   CG  H+  LTS GELY+WGSN  G L
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQIC---TSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           G+       SP+ +  P S +P+         +  ++CG  H+  IS+   + +GW    
Sbjct: 172 GV------QSPKDL--PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAV-FGW---- 218

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                 G ++ GQLG  ++ +  +P+ +     +    V+CG
Sbjct: 219 ------GKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCG 254



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 28/158 (17%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           E      PS I   P S  +++ CG  HT  LT+ G++Y  G+N++  LG       H  
Sbjct: 20  ENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLG-------HEL 72

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P +   P  E         ++ ++CG +H+ A++E G+IL+WG             +  G
Sbjct: 73  PTKRPLPIPELQ----AYVVIQIACGSRHSMALTEWGQILSWG------------DNDCG 116

Query: 390 QLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           Q+GH  D D I  P I+ F  +   +Q++CG NH+ AL
Sbjct: 117 QVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL 154


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 151/339 (44%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           I+    P +V+    +  V  I       +CG   TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHI-------ACGANFTAAI 418



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 164/372 (44%), Gaps = 60/372 (16%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 84  CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 250 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSC 355
              T  LT+ G++ + G++  G LG  + D         G       D+I    VL V+C
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSD---------GRLPCLVEDRIAGEHVLQVAC 358

Query: 356 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H A ++   ++ TWG G +            G+LGHG+  D   PT V   ++    
Sbjct: 359 GSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVR 406

Query: 415 QVSCGFNHTGAL 426
            ++CG N T A+
Sbjct: 407 HIACGANFTAAI 418



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 56  IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           +R+ G     PV         VSCG  HTA I S G++ T+G G            S G 
Sbjct: 175 KRISGALDGLPV-------AYVSCGTWHTALITSMGQLFTFGDG------------SFGV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 151/339 (44%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           I+    P +V+    +  V  I       +CG   TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHI-------ACGANFTAAI 418



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 164/372 (44%), Gaps = 60/372 (16%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 84  CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 250 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSC 355
              T  LT+ G++ + G++  G LG  + D         G       D+I    VL V+C
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSD---------GRLPCLVEDRIAGEHVLQVAC 358

Query: 356 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H A ++   ++ TWG G +            G+LGHG+  D   PT V   ++    
Sbjct: 359 GSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVR 406

Query: 415 QVSCGFNHTGAL 426
            ++CG N T A+
Sbjct: 407 HIACGANFTAAI 418



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 56  IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           +R+ G     PV         VSCG  HTA I S G++ T+G G            S G 
Sbjct: 175 KRISGALDGLPV-------AYVSCGTWHTALITSMGQLFTFGDG------------SFGV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 155/333 (46%), Gaps = 24/333 (7%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +  +++  ACGG+HTL LT+ G +Y  G ND 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N   +  P  IS L+  +V Q+S G  HS A+T  G+L+ WG N+ GQLG   
Sbjct: 66  GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 P P  ++ ++     Q + G    +A+T  G++ +WGA   G+LG G     + 
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   T  L+K L G+ +   A G  HS  + ++G ++ +G     ++   + +   
Sbjct: 185 --------TATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRC 236

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       + CG   +  LT  G ++T G    G LG G+      P  V   
Sbjct: 237 YPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV--- 293

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKI 368
                 + + + I  ++CG KHT A   S GK+
Sbjct: 294 -----FELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 21/317 (6%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG    +L ++ RP   SA E + +  ++CG +H+L LT  G +++ G N  G
Sbjct: 61  GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++     P  I  +  K VVQIS G+ H  A+T  GEL+ WG N  GQLGLG  
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV P  T V+ L+GI     A G   S AV+  G +  WG    G+LG          
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  +K L  + V+  + G   S  + + G V+  G     ++    G H   
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287

Query: 281 --PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P ++ +L  S+  ++ CG  HT     S G++Y +G    G LG+GS    ++P+ V+
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVR 347

Query: 336 GPFSESPVDQICTSIVL 352
           GP+  + +D   +++++
Sbjct: 348 GPWVSNWIDAAQSTLIV 364



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 137/310 (44%), Gaps = 39/310 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQA 182
           V Q + G  H+  +T DG+LY  G N +GQLG        +P   P  +  L      Q 
Sbjct: 38  VQQAACGGSHTLLLTKDGKLYTCGNNDHGQLG---HDTNNLPNKRPQFISALENYIVTQV 94

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G++ SWG+  +G+LGH         L   S   PR+IK +    V  
Sbjct: 95  SCGLSHSLALTNWGQLFSWGSNATGQLGHD--------LDMVSYPAPRMIKSIATKTVVQ 146

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGY 298
            + G  H   +  +G ++ +G     ++ L   G      +L+  L   P +  + CGG 
Sbjct: 147 ISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAF-IACGGN 205

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  ++  G ++ WG N  G LG+  +D    P +++   S          +  +SCG  
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRS--------LGVRYISCGDD 257

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            +  ++ EG + T G G    TF        GQLGHG   + I P +V      K  Q++
Sbjct: 258 FSVFLTQEGGVFTCGLG----TF--------GQLGHGTHGNEILPRMVFELMGSKITQIA 305

Query: 418 CGFNHTGALL 427
           CG  HT A +
Sbjct: 306 CGRKHTLAFV 315



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 33/281 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG   +G+LGLG    + +  P +++       +QAA G   ++ +T  GK+ + G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH           +     P+ I  LE   V   + G  HS  +   G+++ +G
Sbjct: 63  NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114

Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++    +      P +I  +      ++ CG  H   LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
           G+G+         +    +  P       I  ++CG  H+ A+S+ G I  WG      T
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIP-------IAFIACGGNHSFAVSKSGAIFGWG----KNT 223

Query: 380 FSEDGHSSGGQLGHGNDVD-YIHPTIVNFGENVKALQVSCG 419
           F        GQLG  ND+D   +PT +    ++    +SCG
Sbjct: 224 F--------GQLGL-NDLDSRCYPTQLKTLRSLGVRYISCG 255



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL  L+SR  P          ++ ++CG   ++FLT+ G V+  GL  FGQ
Sbjct: 219 WGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
           LG   +    L  +    +  ++ QI+ G  H+ A +   G++Y
Sbjct: 279 LGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 20/123 (16%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           LY WGS  +G LG+G I+     E+V  P  E    Q   ++   +CG  HT  ++ +GK
Sbjct: 3   LYCWGSTVHGELGLGGIE----EEQVMTP-REMDWSQ-AANVQQAACGGSHTLLLTKDGK 56

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           + T G            ++  GQLGH  N++    P  ++  EN    QVSCG +H+ AL
Sbjct: 57  LYTCG------------NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLAL 104

Query: 427 LEY 429
             +
Sbjct: 105 TNW 107


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 43/367 (11%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV-----LVSCGW 357
           +T  G +YT+G   +G LG+G  +           F+   +  +C++ +     LV+CG 
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLEN-----------FTNHFIPTLCSNFLRFIVKLVACGG 358

Query: 358 KHTAAIS 364
            H    +
Sbjct: 359 CHMVVFA 365



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 171/358 (47%), Gaps = 48/358 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 422
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG  H
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACGGCH 360


>gi|195996231|ref|XP_002107984.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
 gi|190588760|gb|EDV28782.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
          Length = 347

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 149/330 (45%), Gaps = 24/330 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL----TETGCVYATGLND 99
           G   YG+LGLG  + +  P           K +  GG H++FL     ETG +YA G N+
Sbjct: 31  GANSYGQLGLGHTDDKITPQKMPNL-NFKPKWIGGGGGHSVFLDVYVAETGELYACGWNN 89

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG+      ++  L+   L   + +++ G++H+ A++V+G+LY WG N+ GQLG   
Sbjct: 90  NGQLGLEHQ--DNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNAFGQLGHSP 147

Query: 160 -KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +I  PT +E +S         G   + AV   G+  SWGA   G+LG G+   I+
Sbjct: 148 CSRGSIINTPTLIEDISDREFIDTCAGLRHTHAVEACGQTWSWGACKKGQLGIGERMDIV 207

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P LI  L G++VK   AG  HSAC+ E G V+ +G     +    +   +
Sbjct: 208 --------EKPVLISTLRGIRVKKVVAGSYHSACLTECGEVFCWGSNRYGQCTLADKTES 259

Query: 279 RRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             P  IS          ++  G  H   +  GG +Y+WG  + G LG   +    S    
Sbjct: 260 LIPVKISSESCVNKCFIDIHSGWSHVVAVVEGGIVYSWGRCDYGQLGYTELSDGDSKRYQ 319

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           Q P     +      +  ++CG +H   IS
Sbjct: 320 QEPACVPNLH----DLRQIACGSEHNIVIS 345



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 32/236 (13%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID----EN 256
           W     G   +GQ    LG   +  + TP+ +  L   K K    G  HS  +D    E 
Sbjct: 25  WSQRQQGANSYGQ----LGLGHTDDKITPQKMPNLN-FKPKWIGGGGGHSVFLDVYVAET 79

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G +Y  G     ++  +  ++  R   +S     ++V CG  HT  L+  G+LY+WGSN 
Sbjct: 80  GELYACGWNNNGQLGLEHQDNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNA 139

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESP--VDQICTSIVLVSC-GWKHTAAISEGKILTWGW 373
            G LG       HSP   +G    +P  ++ I     + +C G +HT A+ E    TW W
Sbjct: 140 FGQLG-------HSPCS-RGSIINTPTLIEDISDREFIDTCAGLRHTHAV-EACGQTWSW 190

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 428
           G              GQLG G  +D +  P +++    ++  +V  G  H+  L E
Sbjct: 191 GA----------CKKGQLGIGERMDIVEKPVLISTLRGIRVKKVVAGSYHSACLTE 236


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 181/370 (48%), Gaps = 47/370 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++++ACG  H   +T+ G V++ G+++ G+LG   ++  S +P  I  L    V+ I+ G
Sbjct: 217 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 275

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
             H+ A+++ GELY WG+ ++  LGL G +  +    P K+   L GI   + A G   +
Sbjct: 276 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 334

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             ++  G++ ++G G  G LGHG   ++           P+ ++ L+GV+ K  A G  H
Sbjct: 335 AIISSAGQIFTYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 385

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           +A I E          +G+++ +GD    K+   +      P+ +  L   +  +V C  
Sbjct: 386 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 445

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             T VLT  G ++T GS E+G LG   +    S   ++GP     V +I       S G 
Sbjct: 446 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREI-------SSGS 497

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H A ++  GK+ TWG G            + GQLG G+ VD  +PT+V   E+ +   +
Sbjct: 498 SHIAVLTMNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSI 545

Query: 417 SCGFNHTGAL 426
           +CGFN T A+
Sbjct: 546 ACGFNFTMAI 555



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 136/327 (41%), Gaps = 51/327 (15%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+ L K+  + S G H +   T   ++++WG+     L  G  +   + +P  +     I
Sbjct: 158 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 215

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +  A G + +  VT  G+V SWG    GRLGH           S S   P++I+ L  
Sbjct: 216 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 266

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            +VK  A G  H+  +  +G +Y +G+      L+  G+  +R        +        
Sbjct: 267 TRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLW--GDQYQRSQWFPHKLFGPLDGISI 324

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            ++ CG +HT +++S G+++T+G    G LG G    +  P++V+               
Sbjct: 325 LKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKG--------VRA 376

Query: 351 VLVSCGWKHTAAISE-----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             ++CG  HTAAI E           GK+ TW            G +  G+LGH +    
Sbjct: 377 KAIACGPWHTAAIVERMGTVKSNAPSGKLFTW------------GDADRGKLGHADKKMK 424

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
           + PT V    +    QVSC    T  L
Sbjct: 425 LVPTCVEPLNDFDFAQVSCAKAQTIVL 451



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG    + +  P             ++C  A T+ LT TG V+  G  + G+
Sbjct: 408 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 467

Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG  +SE+    L    I G LK E V +IS+G  H + +T++G+++ WGK + GQLGLG
Sbjct: 468 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 523

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
               +    PT VE L        A GF  ++A+
Sbjct: 524 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 36/298 (12%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKV 198
           D + YM  K +   +   K + + I +  K+  + ++ +  ++++ G   +   T    +
Sbjct: 124 DLDYYM-EKVTPDVVNRVKHSCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGATSLKDI 182

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             WG      L HG  S     L       PRL+     + V+  A G  H+A + + G 
Sbjct: 183 FVWGEVPGNVLDHGDVSKANVSL-------PRLLNTTHIIDVQSVACGEKHAAIVTKQGE 235

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ +G     ++  +       P +I  L  +  + +  G  HTC ++  GELY WG   
Sbjct: 236 VFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGT 295

Query: 317 NGCLGIGSIDVLHS---PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
           + CLG+       S   P ++ GP      D I  SI+ ++CG  HTA IS  G+I T+G
Sbjct: 296 H-CLGLWGDQYQRSQWFPHKLFGPL-----DGI--SILKIACGHWHTAIISSAGQIFTYG 347

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
                GTF        G LGHG+ +    P  V   + V+A  ++CG  HT A++E +
Sbjct: 348 ----DGTF--------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 393



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 141/344 (40%), Gaps = 50/344 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG     S   P +  +     +KA+A G  HT  ++ +G +Y    G +  
Sbjct: 239 WGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCL 298

Query: 101 G----QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G    Q   S+   + L  PL   G+   +++I+ G+ H++ I+  G+++ +G  + G L
Sbjct: 299 GLWGDQYQRSQWFPHKLFGPL--DGI--SILKIACGHWHTAIISSAGQIFTYGDGTFGVL 354

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGG 205
           G G      +  P +VE L G+  K  A G   + A+             GK+ +WG   
Sbjct: 355 GHGDTL--TVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDAD 412

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH  +   L          P  ++ L        +     +  +   G V+  G +
Sbjct: 413 RGKLGHADKKMKL---------VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSK 463

Query: 266 AVDKMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
              ++    GN     + I       K  +  E+  G  H  VLT  G+++TWG    G 
Sbjct: 464 EHGRL----GNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 519

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           LG+G        +R      E+  D+   SI   +CG+  T AI
Sbjct: 520 LGLGDY-----VDRSYPTLVEALEDKQVHSI---ACGFNFTMAI 555


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 187/404 (46%), Gaps = 64/404 (15%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 2982 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 3039

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+     +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 3040 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 3098

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 3099 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 3152

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 3153 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 3202

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTW   +   LG GS+D
Sbjct: 3203 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVD 3260

Query: 327  VLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             +  P++V   QG             I+ ++ G  H  A S+ G++ TW           
Sbjct: 3261 HVRRPKKVAALQG-----------KKIISIATGSLHCVACSDSGEVYTW----------- 3298

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G +  GQLG G       P +V   +    ++V+CG  HT AL
Sbjct: 3299 -GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 3341



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +        ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 1943 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2002

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 2003 LGHGDN-ATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG 2061

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 2062 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2117

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 2118 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 2168

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 2169 NKKPALVIGLDAVFVNRVACGSSHS 2193



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 134/303 (44%), Gaps = 33/303 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 3068 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 3125

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 3126 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 3183

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 3184 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 3234

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +      ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 3235 VALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 3294

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            +YTWG N+ G LG G++  +  P  V   QG             IV V+CG  HT A+S 
Sbjct: 3295 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-----------KHIVKVTCGSAHTLALST 3343

Query: 366  GKI 368
             ++
Sbjct: 3344 SQL 3346



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 166/356 (46%), Gaps = 41/356 (11%)

Query: 79   GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+  + G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 1872 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 1930

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 1931 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  ++ L          P+L+  L G +V   A G     +  
Sbjct: 1989 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVAALAGRRVIQVACGSRDAQTLA 2039

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 2040 LTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 2099

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G    +  P+ + G             ++ V+ G  H  A+++ G++ 
Sbjct: 2100 TWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVTDAGQVY 2151

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 2152 AWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 129/304 (42%), Gaps = 42/304 (13%)

Query: 134  HSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            H  A  +D +L     +WG N   QLG G K +KV  +PT  + +S +     A G +  
Sbjct: 1820 HGMAGALDQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSL 1877

Query: 190  VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
              V   GKV + G G +GRLG G   ++           P  +  L    VK  A  +G 
Sbjct: 1878 FIVGQNGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGG 1928

Query: 248  LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
             H+  +  +G+V+ +G+    K+         +P L+  L   +  +V CG  H+  ++S
Sbjct: 1929 KHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988

Query: 306  GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAI 363
             GELYTWG  E G LG G       P+ V               ++ V+CG +   T A+
Sbjct: 1989 QGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGR--------RVIQVACGSRDAQTLAL 2040

Query: 364  SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
            +E G + +WG     G F        G+LG G       P  +     +  +Q+ CG   
Sbjct: 2041 TEDGSVFSWG----DGDF--------GKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQF 2088

Query: 423  TGAL 426
            + AL
Sbjct: 2089 SLAL 2092



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            W  GD+ RLG GS++   RP   +A +   + ++A G  H +  +++G VY  G ND GQ
Sbjct: 3246 WSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQ 3305

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
            LG    +     P  ++ L+ K +V+++ G  H+ A++ 
Sbjct: 3306 LG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 3343


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 43/367 (11%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV-----LVSCGW 357
           +T  G +YT+G   +G LG+G  +           F+   +  +C++ +     LV+CG 
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLEN-----------FTNHFIPTLCSNFLRFIVKLVACGG 358

Query: 358 KHTAAIS 364
            H    +
Sbjct: 359 CHMVVFA 365



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 171/358 (47%), Gaps = 48/358 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 422
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG  H
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACGGCH 360


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 149/318 (46%), Gaps = 43/318 (13%)

Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           SGL +  V IS G  HSS + VDG+L++WGK   G+LG G++    +P  T    L  I 
Sbjct: 89  SGLTE--VGISCGLFHSS-LVVDGKLWIWGKGDGGRLGFGQEYPAFLP--TLNPNLDSI- 142

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            +  ALG   SVA++  G+V +WG GG G LGH              E  PR+++     
Sbjct: 143 -RSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHR---------ELLPRMVEGSWNA 192

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-------FQEGNHARRPSLISKLPYSE 291
           K++  A    H+A I E+G +Y +G    D  L         EG     PS +  LP   
Sbjct: 193 KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPV 252

Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
             V CGG+ T VLT  G+L+ WG+N N  LG G       P+ +       P  Q    I
Sbjct: 253 AAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPI-------PSLQDVRII 305

Query: 351 VLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
            + S G+   A   +GK+L+WG+G              GQLGH +  +   PT++    +
Sbjct: 306 QIASGGYHSLALTDDGKVLSWGYG------------QHGQLGHSSIENQKIPTVIEALAD 353

Query: 411 VKALQVSCGFNHTGALLE 428
              + ++CG + + A+ +
Sbjct: 354 EHVIYIACGGSSSAAITD 371



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G     + P +    +  S+++ A GG H++ L+  G V+  G   FG
Sbjct: 113 IWGKGDGGRLGFGQEYPAFLPTLNPNLD--SIRSTALGGVHSVALSSLGQVFTWGYGGFG 170

Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS-NGQLGLGK 159
            LG S      L P  + G    ++  I+T   H++AIT  GELY WG++  +G+LGLG 
Sbjct: 171 ALGHSV-YHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGP 229

Query: 160 KAAKV----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + IP+KV+ L       +  GF   V +T  G++ +WGA  +  LG G + 
Sbjct: 230 NCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMV-LTQEGQLWNWGANSNYELGRGDK- 287

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                      + P+ I  L+ V++   A+G  HS  + ++G+V  +G     ++     
Sbjct: 288 --------VGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI 339

Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
            + + P++I  L   E V+   CGG  +  +T  G+LY WG+ ++  LG+
Sbjct: 340 ENQKIPTVIEAL-ADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV 388



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           S+L + F   WG G +G LG         P +        ++ +A  G HT  +TE+G +
Sbjct: 156 SSLGQVFT--WGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGEL 213

Query: 93  YATGLND-FGQLGISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
           Y  G +   G+LG+  N G +       P ++  L   V  +S G   +  +T +G+L+ 
Sbjct: 214 YTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWN 273

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG NSN +LG G K     P P  +  L  +   Q A G   S+A+T  GKVLSWG G  
Sbjct: 274 WGANSNYELGRGDKVGGWKPQP--IPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQH 331

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH   SSI       ++  P +I+ L    V   A G   SA I +NG++Y++G+ A
Sbjct: 332 GQLGH---SSI------ENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGN-A 381

Query: 267 VDKMLFQEGNHARRP 281
            D  L   G    +P
Sbjct: 382 KDSQLGVPGLPETQP 396



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 3/133 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG      LG G     W+P    + +   +  +A GG H+L LT+ G V + G    GQ
Sbjct: 274 WGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQ 333

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG S +I     P  I  L  E V+ I+ G   S+AIT +G+LYMWG   + QLG+    
Sbjct: 334 LGHS-SIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV-PGL 391

Query: 162 AKVIPIPTKVECL 174
            +  P+P +V+ L
Sbjct: 392 PETQPLPVEVKFL 404



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 24/191 (12%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP----------RL----IKELEGVKVKI 242
           ++LSWG G SG+LG G E   L      + + P          RL    ++   G+    
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            + G  HS+ +  +G+++I+G     ++ F +   A  P+L   L        GG H+  
Sbjct: 96  ISCGLFHSSLV-VDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIRSTALGGVHSVA 154

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           L+S G+++TWG    G LG         P  V+G ++          I  ++    HTAA
Sbjct: 155 LSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWN--------AKIRHIATAGTHTAA 206

Query: 363 ISE-GKILTWG 372
           I+E G++ TWG
Sbjct: 207 ITESGELYTWG 217


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 162/341 (47%), Gaps = 27/341 (7%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P      + + ++ +ACG  +T+ +T  G VY+ G ND+
Sbjct: 4   WGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  +I+ G  H+ A+   G+L+ WG N  GQLGL  
Sbjct: 64  GQLG-HEKARKRLQ--LIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V+ L      Q A G E S+A+T  G++ SWG+   G+LG G       
Sbjct: 121 VDCTE-RTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGS------ 173

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              + +E  P+ I  L  V +   A G  H+  I ++G V+ +G     ++   +     
Sbjct: 174 --HTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG G+      P +V   
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQV--- 288

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGS 376
                ++ + +++  +SCG +HT A+  S G++  WG GG+
Sbjct: 289 -----MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 137/302 (45%), Gaps = 16/302 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    ++R R  +    +    K +ACG  HTL + E G +++ G N  GQL
Sbjct: 59  GNNDYGQLG--HEKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116

Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L   V VQI+ G  HS A+T DGELY WG N  GQLG+G    
Sbjct: 117 GLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTV 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P ++  L+ +     A G   +V ++  G V +WG    G+LG            
Sbjct: 177 TEIK-PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLND--------- 226

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P  ++ L   KV  AA G   S  +  +G V+  G     ++    G +   P 
Sbjct: 227 TQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + +L  S   ++ CG  HT  L  S G +Y WG    G LG  +     +P  V GP+S
Sbjct: 287 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVVLGPWS 346

Query: 340 ES 341
            +
Sbjct: 347 SA 348



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 155/339 (45%), Gaps = 50/339 (14%)

Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG+     ENI     P ++   K  EV QI+ G +++  IT DG++Y  G N  GQL
Sbjct: 10  GELGLGGIEDENI---FMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQL 66

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  K   ++  IP     L     K+ A G   ++AV   G++ SWG    G+LG     
Sbjct: 67  GHEKARKRLQLIPG----LDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS-- 120

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                    +E TPR++K L    +   A G  HS  +  +G +Y +G     ++    G
Sbjct: 121 ------VDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGI--G 172

Query: 276 NHA------RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +H       +R   ++ +P +  + CGGYHT V++  G ++ WG N  G LG+       
Sbjct: 173 SHTVTEIKPKRIITLAAVPIAF-IACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 388
            P +++   +     ++C +    +CG + +  ++ +G + T G G              
Sbjct: 232 VPCQLRTLRNA----KVCYA----ACGEEFSVFLTLDGGVFTCGAGMY------------ 271

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           GQLGHGN ++ I P  V         Q+SCG  HT AL+
Sbjct: 272 GQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALV 310



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 125/281 (44%), Gaps = 36/281 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG   +G+LGLG    + I +P +V+       +Q A G   +V +T  G+V S G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +    L           +LI  L+    K  A G  H+  ++E G+++ +G
Sbjct: 61  NDYGQLGHEKARKRL-----------QLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                ++ L       R P ++  L  S   ++ CG  H+  LT+ GELY+WGSN  G L
Sbjct: 110 CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQL 169

Query: 321 GIGSIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHG 378
           GIGS  V    P+R+        +      I  ++CG  HT  IS+ G +  WG      
Sbjct: 170 GIGSHTVTEIKPKRI--------ITLAAVPIAFIACGGYHTVVISKSGVVFAWG----RN 217

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           TF        GQLG  +    I P  +    N K    +CG
Sbjct: 218 TF--------GQLGLNDTQQRIVPCQLRTLRNAKVCYAACG 250



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 1/126 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL   + R  P          +   ACG   ++FLT  G V+  G   +GQ
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
           LG    +   L    +  +   V QIS G  H+ A+    G +Y WG    GQLG     
Sbjct: 274 LGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASR 333

Query: 162 AKVIPI 167
           +   P+
Sbjct: 334 SATTPL 339


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  +  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 182/406 (44%), Gaps = 48/406 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +    +  A E + ++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C S +  +Q A G   SV +T  G V SWG           
Sbjct: 130 KDDTGRPLRRDIVIPQR--CASKLVVRQVAAGGTHSVVLTREGHVWSWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S   P  ++ LE  +V++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--RVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 388
            P+RV     E         IV VSCG  H+ A++ +G++ T+G  G HG     G+   
Sbjct: 293 VPQRVNLLVGE--------DIVQVSCGGTHSVALTRDGRMYTFG-RGDHGRL---GYGRK 340

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQ-----VSCGFNHTGALLEY 429
              G   +V    P   N  ++  A +     V+ G  HT A++E+
Sbjct: 341 VTTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIVEW 386



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 125/347 (36%), Gaps = 87/347 (25%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +  +  +  WG   +GQLG+G    K       V+ L     +    G   S+A+   GK
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEK--EWVCIVKALEPYKVRSVVAGSRNSLAICDDGK 58

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           + +WG    G LGH  E+         +E  P  +K L  V +  AA G  H   +D+ G
Sbjct: 59  LFTWGWNQRGTLGHPPETK--------TENIPSQVKALANVNIVQAAIGGWHCLAVDDQG 110

Query: 258 RVYIFG----------------------------DRAVDKMLFQE----GNHA------- 278
           R Y +G                             R   K++ ++    G H+       
Sbjct: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREG 170

Query: 279 -----------------RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                              P  +  L     +  G +H   L   G L+ WG+NE G LG
Sbjct: 171 HVWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
            G       P  VQG    + VD       + + GW  TA   +G++  WG  G HG   
Sbjct: 231 TGDTQPRSQPITVQGLSGLTLVD-------IAAGGWHSTALTDDGEVYGWG-RGEHGRLG 282

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGAL 426
                     G  +    + P  VN   GE++  +QVSCG  H+ AL
Sbjct: 283 ---------FGDNDKSSKMVPQRVNLLVGEDI--VQVSCGGTHSVAL 318


>gi|74219054|dbj|BAE26671.1| unnamed protein product [Mus musculus]
          Length = 464

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 177/412 (42%), Gaps = 54/412 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E  + P   S F +   +K++  GG H+  +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G V  WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE      A AG  HSA + + G +Y++G R     L   
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247

Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                 P  I    + +E V     G  H    T  G+++TWG  + G LG      L  
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303

Query: 331 PE-----------RVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
           PE             QGP +  P    C T    +SCG +H  A+   K  +WGW     
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW----- 358

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGALLE 428
                  +  G  G G + +   PT V        + L V CG  H+ A+ +
Sbjct: 359 -------NEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 35/295 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           ++A G N +GQLG+       L P ++S   +   +  ++ G  HS+ +T  G+L++ G 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G+L
Sbjct: 76  NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133

Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
           G  HG    ++          P+ I+ L   KV   AAG  H+      G V+ +G    
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182

Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
           +  + L    N      A+ PS ++ L  S  V  V G  H+  LT  GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            L   ++  L  P+R++  + +         +  V  GW H  A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQD------EKVTAVWSGWTHLVAKTETGKVFTWG 290



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 32/250 (12%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S  ++    L+ WG NS GQLGLG K    +P      C +G   K    G   S  VT 
Sbjct: 8   SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           GG +   G    G+LG G    +L F          + K L G  ++  A G+  +  + 
Sbjct: 67  GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117

Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
           E G+V   G  A  ++    G      P  I  L   E+VVC   G  H    T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175

Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            WG     S    C G  +        P RV G  +        ++ V    G  H+A++
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLEN--------STAVCAVAGSDHSASL 227

Query: 364 SE-GKILTWG 372
           ++ G++  WG
Sbjct: 228 TDTGELYVWG 237


>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
           [Owenweeksia hongkongensis DSM 17368]
 gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
           [Owenweeksia hongkongensis DSM 17368]
          Length = 440

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 144/297 (48%), Gaps = 22/297 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  +YG++G  + E    P       K  +K +A G  H+L + E G V+A G N++GQL
Sbjct: 43  GRNNYGQIGDSTYEDHNTPYHVERLPK--IKIIARGYDHSLAIDEQGRVWAWGRNNYGQL 100

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G +  I ++   L ++   ++ + +  G+ H+ A+  DG ++ WG N  G+LG G +   
Sbjct: 101 GSAIPIDFNTPQLVVN--HRDFISVEGGHWHTVALKEDGTVWTWGHNFYGELGDGTREHS 158

Query: 164 VIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             P   +      L GI  K  ++G+  ++A+   G+V SWG+   G LGH        F
Sbjct: 159 QYPRSVVKKDKTTLQGI-VKIVSVGY-HTLALDKNGEVYSWGSNDFGELGH--------F 208

Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 Y  ++    EG++ +K  A G+ HS  I+ENG ++++G     ++     +H  
Sbjct: 209 HNVIQHYAEKV----EGLQNIKSIAVGWHHSVAINENGELFMWGSDPSTQVRESTSDHFN 264

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               I  LP   ++ CG +H+  +   G+++ WG+N  G LG         P+++ G
Sbjct: 265 SIVKIDSLPPMVKIACGSWHSLAIDETGQVWGWGNNRYGMLGTKDTISYTYPKKIPG 321



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 33/252 (13%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           +  G  H+  +  DG+++  G+N+ GQ  +G    +    P  VE L  I  K  A G++
Sbjct: 23  VDAGNGHAIVLDKDGKVFTMGRNNYGQ--IGDSTYEDHNTPYHVERLPKI--KIIARGYD 78

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL-IKELEGVKVKIAAAG 246
            S+A+   G+V +WG    G+LG    S+I          TP+L +   + + V+    G
Sbjct: 79  HSLAIDEQGRVWAWGRNNYGQLG----SAI-----PIDFNTPQLVVNHRDFISVE---GG 126

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTC 301
             H+  + E+G V+ +G     ++      H++ P  + K   +      ++V  GYHT 
Sbjct: 127 HWHTVALKEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVKIVSVGYHTL 186

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L   GE+Y+WGSN+ G LG     + H  E+V+G            +I  ++ GW H+ 
Sbjct: 187 ALDKNGEVYSWGSNDFGELGHFHNVIQHYAEKVEG----------LQNIKSIAVGWHHSV 236

Query: 362 AISE-GKILTWG 372
           AI+E G++  WG
Sbjct: 237 AINENGELFMWG 248



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 105/249 (42%), Gaps = 45/249 (18%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKVKIAAA 245
            ++ +   GKV + G    G++G            ST E   TP  ++ L   K+KI A 
Sbjct: 29  HAIVLDKDGKVFTMGRNNYGQIG-----------DSTYEDHNTPYHVERLP--KIKIIAR 75

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G+ HS  IDE GRV+ +G     ++          P L+        V  G +HT  L  
Sbjct: 76  GYDHSLAIDEQGRVWAWGRNNYGQLGSAIPIDFNTPQLVVNHRDFISVEGGHWHTVALKE 135

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS--IVLVSCGWKHTAAI 363
            G ++TWG N  G LG G+       E  Q P S    D+      + +VS G+   A  
Sbjct: 136 DGTVWTWGHNFYGELGDGT------REHSQYPRSVVKKDKTTLQGIVKIVSVGYHTLALD 189

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ----VSCG 419
             G++ +WG             +  G+LGH       H  I ++ E V+ LQ    ++ G
Sbjct: 190 KNGEVYSWG------------SNDFGELGH------FHNVIQHYAEKVEGLQNIKSIAVG 231

Query: 420 FNHTGALLE 428
           ++H+ A+ E
Sbjct: 232 WHHSVAINE 240


>gi|7305093|ref|NP_038817.1| secretion-regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|38257405|sp|Q80YD6.2|SRGEF_MOUSE RecName: Full=Secretion-regulating guanine nucleotide exchange
           factor; AltName: Full=Deafness locus-associated putative
           guanine nucleotide exchange factor; Short=DelGEF;
           AltName: Full=Guanine nucleotide exchange factor-related
           protein
 gi|6434206|emb|CAB60840.1| deafness locus associated putative guanine nucleotide exchange
           factor [Mus musculus]
 gi|110645832|gb|AAI19534.1| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|110645834|gb|AAI19535.1| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|127798601|gb|AAH49603.2| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|148690982|gb|EDL22929.1| secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
          Length = 464

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 177/412 (42%), Gaps = 54/412 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E  + P   S F +   +K++  GG H+  +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G V  WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE      A AG  HSA + + G +Y++G R     L   
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247

Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                 P  I    + +E V     G  H    T  G+++TWG  + G LG      L  
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303

Query: 331 PE-----------RVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
           PE             QGP +  P    C T    +SCG +H  A+   K  +WGW     
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW----- 358

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGALLE 428
                  +  G  G G + +   PT V        + L V CG  H+ A+ +
Sbjct: 359 -------NEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 35/295 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           ++A G N +GQLG+       L P ++S   +   +  ++ G  HS+ +T  G+L++ G 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G+L
Sbjct: 76  NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133

Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
           G  HG    ++          P+ I+ L   KV   AAG  H+      G V+ +G    
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182

Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
           +  + L    N      A+ PS ++ L  S  V  V G  H+  LT  GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            L   ++  L  P+R++  + +         +  V  GW H  A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQD------EKVTAVWSGWTHLVAKTETGKVFTWG 290



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 32/250 (12%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S  ++    L+ WG NS GQLGLG K    +P      C +G   K    G   S  VT 
Sbjct: 8   SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           GG +   G    G+LG G    +L F          + K L G  ++  A G+  +  + 
Sbjct: 67  GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117

Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
           E G+V   G  A  ++    G      P  I  L   E+VVC   G  H    T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175

Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            WG     S    C G  +        P RV G  +        ++ V    G  H+A++
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLEN--------STAVCAVAGSDHSASL 227

Query: 364 SE-GKILTWG 372
           ++ G++  WG
Sbjct: 228 TDTGELYVWG 237


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  +  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 38/289 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWG 202
           ++ WG+  +GQLG+G  + +    PT V+ L G+        G   + AV   G + +WG
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQ--DEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G  G+LGHG ES            TPR ++ L G+ +   A G  H+A +   G +Y +
Sbjct: 59  GGMYGKLGHGNESG---------HSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTW 109

Query: 263 GDR--AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
           GD+   V      EG H   P L+ +L   +  ++   G+HT  LT   E + WG  + G
Sbjct: 110 GDKENGVAGHGDTEG-HQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFG 168

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
            LG G+    HSP  ++    + P          V+CG  H+A I+ +GK+ T+G GG H
Sbjct: 169 RLGNGTERNCHSPRLIESLIGKYPCQ--------VACGGFHSAVITRDGKMYTFG-GGEH 219

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G           QLGH + V+ + PT+V   + V   Q++CG++H+ AL
Sbjct: 220 G-----------QLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 26/282 (9%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           V++ G  + GQLGI +      EP  +  L+    +  ++ G +H++A+  +G+LY WG 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQD-EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGG 59

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
              G+LG G ++      P +VE L G+     A G   +  VT  G + +WG   +G  
Sbjct: 60  GMYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVD 268
           GHG             +YTP+L++ L G KV +++A GF H+AC+ ++   + +G+    
Sbjct: 118 GHGDTEG--------HQYTPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFG 168

Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++      +   P LI  L   Y  +V CGG+H+ V+T  G++YT+G  E+G LG     
Sbjct: 169 RLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKV 228

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGK 367
               P  V+       +D +   +  ++CGW H+ A+ SEG+
Sbjct: 229 NKLKPTLVE------ALDGVV--VKQITCGWSHSVALTSEGE 262



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 17/273 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G+ G+LG+G    +  P    A     +   + CG  HT  +   G +Y  G   +G
Sbjct: 4   WGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYG 63

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG     G+S  P R+  L    +V I+ G  H++ +T  G LY WG   NG  G G  
Sbjct: 64  KLGHGNESGHS-TPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDT 122

Query: 161 AAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  P  +E L+G    Q +A GF  +  +T   +  +WG G  GRLG+G E +   
Sbjct: 123 EGHQY-TPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFGRLGNGTERNC-- 178

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  ++PRLI+ L G      A G  HSA I  +G++Y FG     ++   +  +  
Sbjct: 179 -------HSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL 231

Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
           +P+L+  L     +++ CG  H+  LTS GE +
Sbjct: 232 KPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 12/220 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG+LG G+      P    A    S+  +ACG  HT  +T  GC+Y  G  + G 
Sbjct: 57  WGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGV 116

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G  +  G+   P  +  L  K+VVQ+S    H++ +T D E + WG+   G+LG G + 
Sbjct: 117 AGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTE- 175

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  +E L G +  Q A G   S  +T  GK+ ++G G  G+LGH  + + L   
Sbjct: 176 -RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL--- 231

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
                  P L++ L+GV VK    G+ HS  +   G  ++
Sbjct: 232 ------KPTLVEALDGVVVKQITCGWSHSVALTSEGEYHL 265



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 24/139 (17%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           V CG YHT  + S G+LYTWG    G LG G+     +P RV+     S VD        
Sbjct: 38  VTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVD-------- 89

Query: 353 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGEN 410
           ++CG +HTA + S+G + TW            G    G  GHG+   + + P ++     
Sbjct: 90  IACGSRHTAVVTSKGCLYTW------------GDKENGVAGHGDTEGHQYTPKLLERLNG 137

Query: 411 VKALQVS-CGFNHTGALLE 428
            K +Q+S CGF HT  L +
Sbjct: 138 KKVVQLSACGF-HTACLTD 155


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 164/360 (45%), Gaps = 54/360 (15%)

Query: 34  TLQRRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
           +L R+ AAL         WG G  G+LG         P +  + +   +K++ACG   T 
Sbjct: 311 SLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTC 370

Query: 85  FLTETGCVYATGLNDFG-QLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVD 141
            LT++G +YA G N +G  LG  E       P RISG    V  + ++ G  H++ ++  
Sbjct: 371 ALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSS 430

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------- 194
           G+L+ +G  S G LG G   +  +  P +VE L G+  K  A G   + A+         
Sbjct: 431 GQLFTYGDGSFGVLGHGNLLS--VSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFK 488

Query: 195 ----GGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
               GGK+ +WG G  GRLGH   E  +L          P  + +L  +     + G + 
Sbjct: 489 FNGVGGKLFTWGDGDKGRLGHADLEKKLL----------PTCVAQLVELDFDQVSCGRML 538

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-HARRPSLIS-----KLPYSEEVVCGGYHTCVL 303
           +  +   G+VY  G     ++    GN HA+  S++      K  + +E+  G YH   L
Sbjct: 539 TVALTNTGKVYTMGSSVHGQL----GNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAAL 594

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           TS G LYTWG   NG LG+G+++  + P  V     E+  D    SI   +CG   TAAI
Sbjct: 595 TSSGSLYTWGKGTNGQLGLGNVEDRNFPTLV-----EALRDMQVQSI---ACGSNLTAAI 646



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 173/371 (46%), Gaps = 54/371 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G  H   +T+ G V+  G    G+LG   ++  S  P  +  L    V  ++ G + 
Sbjct: 310 ISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVS-SPKMVESLDGVHVKSVACGEYQ 368

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVT 193
           + A+T  GELY WG+N  G     ++ ++   +P ++   L+G+     A G   +  V+
Sbjct: 369 TCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVS 428

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ ++G G  G LGHG        L S S+  P+ ++ L+G+ VK  A G  H+A I
Sbjct: 429 SSGQLFTYGDGSFGVLGHGN-------LLSVSQ--PKEVESLKGLLVKSVACGSWHTAAI 479

Query: 254 DE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHT 300
            +            G+++ +GD    ++   +      P+ +++L     ++V CG   T
Sbjct: 480 VDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLT 539

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPER----VQGPFSESPVDQICTSIVLVSCG 356
             LT+ G++YT GS+ +G LG       H+ ++    V+G   E  V +I       S G
Sbjct: 540 VALTNTGKVYTMGSSVHGQLGNP-----HAKDKSIVIVEGKLKEEFVKEI-------SSG 587

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H AA+ S G + TWG G            + GQLG GN  D   PT+V    +++   
Sbjct: 588 SYHVAALTSSGSLYTWGKG------------TNGQLGLGNVEDRNFPTLVEALRDMQVQS 635

Query: 416 VSCGFNHTGAL 426
           ++CG N T A+
Sbjct: 636 IACGSNLTAAI 646



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 27/240 (11%)

Query: 198 VLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           VL WG G   G +G           +      P+L++    + V   + G  H+A I + 
Sbjct: 264 VLIWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKR 323

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
           G V+ +G+ +  K+  +       P ++  L   + + V CG Y TC LT  GELY WG 
Sbjct: 324 GEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGE 383

Query: 315 NENGCLGIGSIDVLHS---PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILT 370
           N+ G   +G  +   S   P R+ GP +      +C  I+ V+CG  HTA +S  G++ T
Sbjct: 384 NKYGA-NLGCEERSRSQWLPRRISGPLT-----GVC--ILNVACGDWHTAIVSSSGQLFT 435

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           +G G            S G LGHGN +    P  V   + +    V+CG  HT A+++ +
Sbjct: 436 YGDG------------SFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDII 483


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GNPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGNPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 158/347 (45%), Gaps = 54/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  + 
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG  +++ + + P R++G  +   +  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G +Y  G   
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG GS D  ++P  V     E+  D+   SI   +CG   TAAI
Sbjct: 612 NGRLGHGSTDDRNTPTLV-----EALKDKQVKSI---ACGTNFTAAI 650



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 177/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ +ACG  H   +T+ G V++ G    G+LG   +   +  P  I  L    ++ ++ G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACG 368

Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +  +G LG GK  +  +P       L G+     + G   +
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLHISSISCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  GK+ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSI---------SIPREVESLKGLRTVRAACGVWH 478

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 479 TAAVVEVIIGNPNSNNNSSGKLFTWGDG--DKGRLGHGDKEARLVPTCVAALVEPNFCQV 536

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V+++       
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEEL------- 588

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +
Sbjct: 589 ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGSTDDRNTPTLVEALKDKQ 636

Query: 413 ALQVSCGFNHTGAL 426
              ++CG N T A+
Sbjct: 637 VKSIACGTNFTAAI 650



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 122/278 (43%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E +  +  +  A G   +  VT  G+V SWG    GRLGHG +S           
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
           + P+LI  L  + +++ A G  H+  +  +G +Y +GD   +  L   G       P  +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G  D +  P  V+      
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES----- 463

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GK+ TWG G              
Sbjct: 464 -LKGLRT--VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK------------ 508

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         QV+CG + T AL
Sbjct: 509 GRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVAL 546



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 110/229 (48%), Gaps = 33/229 (14%)

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           R+G   +S I   L       P+ ++ +  + V+  A G  H+A + + G V+ +G+   
Sbjct: 285 RVGSSFDSKIDSLL-------PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYG 337

Query: 268 DKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIG 323
            ++     + A  P LI  L     E V CG YHTC +T  G+LYTWG  +  +G LG G
Sbjct: 338 GRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHG 397

Query: 324 SIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 381
             DV H  P+RV GP            I  +SCG  HTA + S GK+ T+G     GTF 
Sbjct: 398 K-DVSHWVPKRVTGPLQ-------GLHISSISCGPWHTALVTSAGKLFTFG----DGTF- 444

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
                  G LGHG+      P  V   + ++ ++ +CG  HT A++E +
Sbjct: 445 -------GVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  120 bits (302), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 31/253 (12%)

Query: 90   GCVYATGLNDFGQLG---------ISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAIT 139
            G +++ G N  GQ+G         +S+ I  +  P  I  LK  +V  ++ GY HS AIT
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNF-PKLIVPLKDTIVTSVACGYQHSVAIT 1558

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
              G +  WG NS+ QLGLG+K+   +P PT +  L+ I  +  + G E ++A+   G+V 
Sbjct: 1559 YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNI--QSVSCGSEHTLALDYIGQVF 1616

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G LGHG E             +P++I+ L+G+ V     G LHS  + +N +V
Sbjct: 1617 SWGNGEGGLLGHGNEDVCP---------SPKIIEALKGLNVDFIVCGGLHSLVLTKNRQV 1667

Query: 260  YIFGDR-----AVDKMLF-QEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELY 310
            Y +G        +DK LF  E  +   P  +          ++  G  H+  L   G++Y
Sbjct: 1668 YSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVY 1727

Query: 311  TWGSNENGCLGIG 323
             WG N NG +G+G
Sbjct: 1728 GWGYNMNGQIGLG 1740



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 156/367 (42%), Gaps = 39/367 (10%)

Query: 73   LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTG 131
            + ++ACG  H++ +T  G V A G N   QLG+ E    S+  P  I  L   +  +S G
Sbjct: 1544 VTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTN-IQSVSCG 1602

Query: 132  YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
              H+ A+   G+++ WG    G LG G +   V P P  +E L G+       G   S+ 
Sbjct: 1603 SEHTLALDYIGQVFSWGNGEGGLLGHGNE--DVCPSPKIIEALKGLNVDFIVCGGLHSLV 1660

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIK-ELEGVKVKIAAAGFL 248
            +T   +V SWG    G+LG  ++        +   Y  TP+ +K  LEGV V   AAG  
Sbjct: 1661 LTKNRQVYSWGRNEGGQLGIDKK-----LFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEA 1715

Query: 249  HSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH-TCVLT 304
            HS  +  NG+VY +G   +  +   +  +      P LI KL   E++ C G + +  L 
Sbjct: 1716 HSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLG 1775

Query: 305  SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES--PVDQIC---TSIVLVSCGWKH 359
               E     S  N  L        + P+  +   ++   P    C     ++ VSCG  H
Sbjct: 1776 LEKEPIKITSTTNNILD------QYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNH 1829

Query: 360  TAAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            + A+        + + WG       + G    G+ G  + V    P  + + ++V    +
Sbjct: 1830 SLALVVADTKHYMLFAWG-----MHKHGQLGIGETGQNSSV----PRPITYLQDVTTYSM 1880

Query: 417  SCGFNHT 423
            +CG  H+
Sbjct: 1881 ACGSYHS 1887



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 14/144 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WGNG+ G LG G+ +    P +  A +  ++  + CGG H+L LT+   VY+ G N+ GQ
Sbjct: 1618 WGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQ 1677

Query: 103  LGISENI-----GYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            LGI + +      Y   P R+ G  +   V+QI+ G  HS A+ ++G++Y WG N NGQ+
Sbjct: 1678 LGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQI 1737

Query: 156  GLGKKA-------AKVIPIPTKVE 172
            GLG +         ++IP   K+E
Sbjct: 1738 GLGMQTDTYPVYEPQLIPKLNKIE 1761



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 86/301 (28%), Positives = 134/301 (44%), Gaps = 29/301 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  + +LGLG       P         ++++++CG  HTL L   G V++ G  + G 
Sbjct: 1566 WGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGL 1625

Query: 103  LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG   N      P  I  LK   V  I  G  HS  +T + ++Y WG+N  GQLG+ KK 
Sbjct: 1626 LG-HGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKL 1684

Query: 162  AK----VIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                   +  P +V+  L G+   Q A G   S+A+   G+V  WG   +G++G G ++ 
Sbjct: 1685 FTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTD 1744

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DENGRVYIFGDRAVDKMLFQ 273
                  +   Y P+LI +L  ++ KI   G   S  +    E  ++    +  +D+   Q
Sbjct: 1745 ------TYPVYEPQLIPKLNKIE-KIFCCGLNDSNQLGLEKEPIKITSTTNNILDQYKPQ 1797

Query: 274  EGNHARRPSLISK-------LPYSEEVVCGGYHTCVL----TSGGELYTWGSNENGCLGI 322
            +   A     I K       +P    V CG  H+  L    T    L+ WG +++G LGI
Sbjct: 1798 DQKRAVTDVFIPKKMDCFHQIPVL-HVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGI 1856

Query: 323  G 323
            G
Sbjct: 1857 G 1857



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 30/241 (12%)

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G + SWG    G++G+  +       +      P+LI  L+   V   A G+ HS  I  
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITY 1559

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRP--SLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             G V  +GD +  ++   E + +  P  + I  L   + V CG  HT  L   G++++WG
Sbjct: 1560 AGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWG 1619

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWG 372
            + E G LG G+ DV  SP+ ++       VD        + CG  H+  +++ + + +W 
Sbjct: 1620 NGEGGLLGHGNEDVCPSPKIIEA-LKGLNVD-------FIVCGGLHSLVLTKNRQVYSW- 1670

Query: 373  WGGSHGTFSEDGHSSGGQLG-----HGNDVDYI-HPTIVNFG-ENVKALQVSCGFNHTGA 425
                       G + GGQLG       N+  Y+  P  V    E V  +Q++ G  H+ A
Sbjct: 1671 -----------GRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLA 1719

Query: 426  L 426
            L
Sbjct: 1720 L 1720



 Score = 42.0 bits (97), Expect = 0.68,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 79/224 (35%), Gaps = 77/224 (34%)

Query: 43   WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
            WG  + G+LG+           L +  R  V    E   +  +A G AH+L L   G VY
Sbjct: 1670 WGRNEGGQLGIDKKLFTNEKCYLTTPKR--VKGNLEGVGVIQIAAGEAHSLALALNGQVY 1727

Query: 94   ATGLNDFGQLGI-------------------------------SENIGYSLEPLRISGLK 122
              G N  GQ+G+                               S  +G   EP++I+   
Sbjct: 1728 GWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLGLEKEPIKITSTT 1787

Query: 123  KE------------------------------VVQISTGYHHSSAITV-DGELYM---WG 148
                                            V+ +S G++HS A+ V D + YM   WG
Sbjct: 1788 NNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWG 1847

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             + +GQLG+G+       +P  +  L  + T   A G   S+ V
Sbjct: 1848 MHKHGQLGIGETGQNS-SVPRPITYLQDVTTYSMACGSYHSLVV 1890


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 178/400 (44%), Gaps = 59/400 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+   G LG G+   R  P  VV S   K      A G AH++ L   G V+  G N +
Sbjct: 474 WGHNTNGELGDGTTTQRTSPTAVVVSGIVK-----TAGGSAHSVALGAGGAVWTWGYNAY 528

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG +      + P ++ G+   V+ ++ G +H+ A++ DG +  WG N+ GQLG G  
Sbjct: 529 GQLG-NGTTTQVVTPTQLPGMSG-VIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTT 586

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A ++ P    V  L G+    A  G   +VA+   G V +WG+   G+LG G        
Sbjct: 587 ANQLTP--QSVPELDGVTAISA--GSTHTVALKADGTVWAWGSNLYGQLGDGTF------ 636

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T   +P  +  LE V V IAA G  H+  +  +G ++++G     ++      +   
Sbjct: 637 ---THRSSPVQVPSLENV-VSIAA-GHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV 691

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L ++  +  GGYHT  L + G+++TWG N +G LG  +I   +SP  V G    
Sbjct: 692 PVQVSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPG---- 747

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                  T+++ ++ G   TA +              GT    G++  GQLG G      
Sbjct: 748 ------LTNVIALAAGGYTTAVLKR-----------DGTVWAFGYNPNGQLGDGTTTSRS 790

Query: 401 HPT------IVNFGENVK--------ALQVSCGFNHTGAL 426
            PT      +V+    V         A   +CG+N  G L
Sbjct: 791 SPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQL 830



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 43/367 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G+LG G    R  P       +  + + + G  H++ +TE G V+  G N +GQ
Sbjct: 169 WGNNPSGQLGNGQRTQRNAPTRVRGLNQ--VVSASAGAEHSVAVTEDGSVWTWGSNAYGQ 226

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N   ++ P+++ G+  +VV ++     + A+  DG ++ WG NS+G+LG G    
Sbjct: 227 LGDGTNTLRAV-PVQVPGM-SDVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTH 284

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++PI  +V  LSG+     A G   ++AV   G   SWG    G+LG G   + L  LR
Sbjct: 285 SLLPI--QVPNLSGV--TNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDG---TTLNRLR 337

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P L+  L GV+    + G +H+  +  +G  + +G  +  ++      ++  P 
Sbjct: 338 ------PVLVAGLTGVRAL--SGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPV 389

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ L  + E+  GGYHT      G LY WG N  G LG G+      P  VQ P S   
Sbjct: 390 QVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVP--VQVPLS--- 444

Query: 343 VDQICTSIVLVSCGWKHTAA----ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                  +     G+ ++ A    ++  ++        H  F+  GH++ G+LG G    
Sbjct: 445 ------GVRWFGAGYYYSVAERKKVNMAQV--------HTLFAW-GHNTNGELGDGTTTQ 489

Query: 399 YIHPTIV 405
              PT V
Sbjct: 490 RTSPTAV 496



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 130/292 (44%), Gaps = 28/292 (9%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           HTL +   G ++A G N  GQLG  +    +  P R+ GL  +VV  S G  HS A+T D
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRN-APTRVRGL-NQVVSASAGAEHSVAVTED 213

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G ++ WG N+ GQLG G    + +P+  +V  +S +    AA    ++VA+   G V +W
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTLRAVPV--QVPGMSDVVAVAAA--GSRTVALKADGTVWTW 269

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   SG LG G          +T    P  +  L G  V   AAG  H+  + ++G  + 
Sbjct: 270 GINSSGELGDG---------TTTHSLLPIQVPNLSG--VTNIAAGLWHTLAVKKDGSAWS 318

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +G+ A  ++      +  RP L++ L     +  G  HT  L   G  + WG N  G LG
Sbjct: 319 WGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLG 378

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWG 372
            G+      P +V             T  V +  G  HT A   +G +  WG
Sbjct: 379 NGTTTNSSIPVQVAA----------LTQAVEIDAGGYHTLARRQDGTLYAWG 420



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 24/296 (8%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           A WG   YG+LG G+  ++  P   S  E   + A++ G  HT+ L   G V+A G N +
Sbjct: 571 AAWGYNAYGQLGNGTTANQLTP--QSVPELDGVTAISAGSTHTVALKADGTVWAWGSNLY 628

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG      +   P+++  L+  VV I+ G+ H+ A+  DG L++WG    GQLGLG  
Sbjct: 629 GQLG-DGTFTHRSSPVQVPSLEN-VVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTT 686

Query: 161 AAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             + +P+      +SG+    A A G   +VA+   G+V +WG   SG+LG   +++I+ 
Sbjct: 687 TNQSVPVQ-----VSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATII- 737

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y+P L+  L  V + +AA G+  +A +  +G V+ FG     ++   +G    
Sbjct: 738 -----QRYSPVLVPGLTNV-IALAAGGYT-TAVLKRDGTVWAFGYNPNGQL--GDGTTTS 788

Query: 280 RPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           R S  + L  S  ++  G  H   L     +   G N  G LG G+     +P +V
Sbjct: 789 RSSPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQV 844



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 175/392 (44%), Gaps = 54/392 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV         + A+A  G+ T+ L   G V+  G+N  G+
Sbjct: 219 WGSNAYGQLGDGTNTLRAVPVQVPGMSD--VVAVAAAGSRTVALKADGTVWTWGINSSGE 276

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +SL P+++  L   V  I+ G  H+ A+  DG  + WG N+ GQLG G    
Sbjct: 277 LGDGTTT-HSLLPIQVPNLSG-VTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLN 334

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+   V  L+G+  +  + G   +VA+   G    WG   +G+LG+G          
Sbjct: 335 RLRPV--LVAGLTGV--RALSGGVVHTVALKWDGTAWGWGYNSAGQLGNG---------T 381

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+   P  +  L    V+I A G+ H+    ++G +Y +GD     +    GN     S
Sbjct: 382 TTNSSIPVQVAALT-QAVEIDAGGY-HTLARRQDGTLYAWGDNFYGAL--GTGNTTSS-S 436

Query: 283 LISKLPYSEEVVCG-GYHTCV-------LTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           +  ++P S     G GY+  V       +     L+ WG N NG LG G+     SP  V
Sbjct: 437 VPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAV 496

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                      + + IV  + G  H+ A+  G  + W W          G+++ GQLG+G
Sbjct: 497 -----------VVSGIVKTAGGSAHSVALGAGGAV-WTW----------GYNAYGQLGNG 534

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                + PT +     V  + V+ G NHT AL
Sbjct: 535 TTTQVVTPTQLPGMSGV--IDVAAGVNHTVAL 564



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 139/312 (44%), Gaps = 46/312 (14%)

Query: 120 GLKKEVVQ--------ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           G+ +EV++        +S G +H+  +   G L+ WG N +GQLG G++  +    PT+V
Sbjct: 134 GITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQR--NAPTRV 191

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L+ + +  A  G E SVAVT  G V +WG+   G+LG G  +     LR+     P +
Sbjct: 192 RGLNQVVSASA--GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNT-----LRAVPVQVPGM 244

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
                   V +AAAG   +  +  +G V+ +G  +  ++      H+  P  +  L    
Sbjct: 245 SD-----VVAVAAAGS-RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVT 298

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
            +  G +HT  +   G  ++WG+N  G LG G+      P  V G           T + 
Sbjct: 299 NIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAG----------LTGVR 348

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            +S G  HT A+ +     WGW          G++S GQLG+G   +   P  V      
Sbjct: 349 ALSGGVVHTVAL-KWDGTAWGW----------GYNSAGQLGNGTTTNSSIP--VQVAALT 395

Query: 412 KALQVSCGFNHT 423
           +A+++  G  HT
Sbjct: 396 QAVEIDAGGYHT 407



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  ++  R+ PV+        + ALA GG  T  L   G V+A G N  GQ
Sbjct: 723 WGYNSSGQLGDATIIQRYSPVLVPGLTN--VIALAAGGYTTAVLKRDGTVWAFGYNPNGQ 780

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S      + L   VV +S+G +H   +  D  +   G NS GQLG G    
Sbjct: 781 LGDGTTTSRSSP---TATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQ 837

Query: 163 KVIPIPTKVECLSG 176
           +  P P +V  L G
Sbjct: 838 R--PTPVQVTNLPG 849



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 27/164 (16%)

Query: 259 VYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
           V+ F  +A   ++   GN A+    R  L + + +   V  G YHT  + SGG L+ WG+
Sbjct: 112 VHSFVVKASPMIIDSNGNRAKCGITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGN 171

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGW 373
           N +G LG G     ++P RV+G             +V  S G +H+ A++E G + TW  
Sbjct: 172 NPSGQLGNGQRTQRNAPTRVRG----------LNQVVSASAGAEHSVAVTEDGSVWTW-- 219

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
                     G ++ GQLG G +     P  V    +V A+  +
Sbjct: 220 ----------GSNAYGQLGDGTNTLRAVPVQVPGMSDVVAVAAA 253



 Score = 45.1 bits (105), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 25/182 (13%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G  H+  +   G ++ +G+    ++   +      P+ +  L        G  H+  +T 
Sbjct: 153 GVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQVVSASAGAEHSVAVTE 212

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G ++TWGSN  G LG G+  +   P +V G         +   + + + G +  A  ++
Sbjct: 213 DGSVWTWGSNAYGQLGDGTNTLRAVPVQVPG---------MSDVVAVAAAGSRTVALKAD 263

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCGFNHTG 424
           G + TW            G +S G+LG G     + P  V    N+  +  ++ G  HT 
Sbjct: 264 GTVWTW------------GINSSGELGDGTTTHSLLPIQV---PNLSGVTNIAAGLWHTL 308

Query: 425 AL 426
           A+
Sbjct: 309 AV 310


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 168/349 (48%), Gaps = 45/349 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLGLG  +   +P +  A    ++  +ACG  HT  +T  G +Y    G+++ 
Sbjct: 261 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 320

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG+ +  +V  ++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 321 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 379

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K +  I  P +V+ L+G+ T   A G   + AV              GK+ +WG G   
Sbjct: 380 DKXS--ISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 437

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V+  G    
Sbjct: 438 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVY 488

Query: 268 DKMLFQEGN-HA--RRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
            ++    GN HA  ++P L+  KL    +EEV CG YH  VLTS  E+YTWG   NG LG
Sbjct: 489 GQL----GNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLG 544

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            G ++   SP  V     ES  D+    + +++CG  ++AAI   K L+
Sbjct: 545 HGDVEDRKSPTLV-----ESLKDK---HVKIIACGSNYSAAICLHKSLS 585



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 52/364 (14%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ-ISTGYHHSSAIT 139
           H+  +T  G V+  G    G+LG+   +G  + +P  +  L    V  ++ G  H+ A+T
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEALAATTVDLVACGEFHTCAVT 305

Query: 140 VDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGG 196
           +DGELY WG   ++ G LG G   +  +P   ++   L G+     A G   +  ++  G
Sbjct: 306 MDGELYTWGDGVHNAGLLGNGTDVSHWMP--KRISGILEGLQVAYVACGPWHTALISSTG 363

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE- 255
           ++ ++G G  G LGHG + SI           PR +  L G++    A G  H+A + E 
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSI---------SYPREVDSLTGLRTIAVACGVWHTAAVVEV 414

Query: 256 ----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHTCVL 303
                     +G+++ +GD   +++   +     +P+ +  L  Y+  ++ CG   T  L
Sbjct: 415 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGL 474

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           T+ G+++T GS+  G LG    D    P  V+          +  S   V+CG  H   +
Sbjct: 475 TTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKL-------LGESAEEVACGAYHVMVL 526

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
            S+ ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N+
Sbjct: 527 TSKNEVYTWGKGAN------------GRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNY 574

Query: 423 TGAL 426
           + A+
Sbjct: 575 SAAI 578



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 26/188 (13%)

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSG 306
           HSA +   G V+ +G+    ++    G    +P L+  L  +  + V CG +HTC +T  
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMD 307

Query: 307 GELYTWGS--NENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           GELYTWG   +  G LG G+ DV H  P+R+ G             +  V+CG  HTA I
Sbjct: 308 GELYTWGDGVHNAGLLGNGT-DVSHWMPKRISGILE-------GLQVAYVACGPWHTALI 359

Query: 364 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           S  G++ T+G     GTF        G LGHG+     +P  V+    ++ + V+CG  H
Sbjct: 360 SSTGQLFTFG----DGTF--------GVLGHGDKXSISYPREVDSLTGLRTIAVACGVWH 407

Query: 423 TGALLEYV 430
           T A++E +
Sbjct: 408 TAAVVEVI 415


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 28/275 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A     ++ +ACGG+H+  +   G +Y  GL ++G+
Sbjct: 3026 WGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGR 3085

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L P  +  L+ + V+Q++ G   +   A+T  G +Y WG    G+LG G 
Sbjct: 3086 LGHGDNT-TQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG 3144

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 +P P  +E L+G+   Q   G + S+A+T  G+V +WG G   RLGHG ++ +  
Sbjct: 3145 SEGCSVPHP--IERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV-- 3200

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P+L++ L+G KV   A G LH   + +NG+VY +GD        Q+GN   
Sbjct: 3201 -------RKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHG----QQGNSTT 3249

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHT---CVLTS 305
               R+P+L+  L       V CG  H+   C L S
Sbjct: 3250 TVNRKPALVQGLEGCKISRVACGSSHSIAWCTLDS 3284



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 126/249 (50%), Gaps = 17/249 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
           G+H L LT  G VY+ G  DFG+LG  + +     P+ I+ L  K VV ++ G HHS+AI
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCD-SPMLINELHGKSVVNVACGSHHSAAI 545

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
           T  GEL+ WG+ S G+LGLG  + + I  P  V  L G+     A G    Q++A+   G
Sbjct: 546 TASGELFTWGRGSFGRLGLG--STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTG 603

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V SWG G  G+LG G          S     P+L+ +L+G+ V     G  +SA + +N
Sbjct: 604 SVYSWGDGEYGKLGRGG---------SEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKN 654

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
           G V+ +G+    K+      H R P  +  L   +   +  G +H    T  GEL +WG 
Sbjct: 655 GAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGR 714

Query: 315 NENGCLGIG 323
           N+ G LG G
Sbjct: 715 NDKGQLGEG 723



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 135/306 (44%), Gaps = 31/306 (10%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  + G+LG   N      P  I  L+ KEVV I+ G  
Sbjct: 4027 AINSGGKHCLALSAEGEVYSWGEGEDGKLG-HGNRSPCDRPRAIESLRGKEVVDIAAGGA 4085

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
            HS+ IT  GELY WGK   G+LG G    +  P    V+ L G      A G    Q++ 
Sbjct: 4086 HSACITSTGELYSWGKGRYGRLGHGDSEDQTKP--KLVDALKGYRVTDVACGSGDAQTLC 4143

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I  L+G+ V     G   S 
Sbjct: 4144 ITDDDSVWSWGDGDYGKLGRGG---------SDGCKVPMKIDALQGLGVIKVECGSQFSV 4194

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             + ++G VY +G     ++     +H RRP   + L   +   + CG  H    T  GE+
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEV 4254

Query: 310  YTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
            YTWG N+ G LG G+ + +  P  V   QG             I  V+CG  H+ A S  
Sbjct: 4255 YTWGDNDEGQLGDGTTNAIQRPRLVAALQG-----------KKINRVACGSAHSLAWSTN 4303

Query: 367  KILTWG 372
            K +  G
Sbjct: 4304 KPVNAG 4309



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 165/370 (44%), Gaps = 56/370 (15%)

Query: 74   KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-----VQI 128
            K + CG       T+   V+  GLND  QLG     G     ++  G+ + +     VQI
Sbjct: 2901 KKVKCGSGVKDIQTQ---VFVWGLNDKDQLG-----GPKGSKIKTPGINETLSTLKCVQI 2952

Query: 129  STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GF 186
              G      +T DG+L+  G+ +NG+LGLG  A  V P P ++  LS    K+ A+  G 
Sbjct: 2953 VGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNV-PQPRQLTSLSQYVIKKVAVHSGG 3011

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              ++A+T  GKV SWG G  G+LGH        F R   +  PRLI+ L   +V+  A G
Sbjct: 3012 RHAMALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALRSKRVRDIACG 3062

Query: 247  FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCV 302
              HSA I  NG +Y +G     ++   +     RP L+  L      +V  G     T  
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLA 3122

Query: 303  LTSGGELYTWGSNENGCLGIGSID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
            LT  G +Y+WG  + G LG G  +   V H  ER+ G             +  + CG + 
Sbjct: 3123 LTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNG-----------VGVCQIECGAQF 3171

Query: 360  TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
            + A+++ G++ TWG G               +LGHG D     P +V   +  K   V+ 
Sbjct: 3172 SLALTKSGQVWTWGKGDYF------------RLGHGTDAHVRKPQLVETLKGKKVTHVAV 3219

Query: 419  GFNHTGALLE 428
            G  H  ++L+
Sbjct: 3220 GALHCLSVLD 3229



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 151/327 (46%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +  +P   ++  ++ +K +A   GG H + LT  G V++ G  D 
Sbjct: 2972 GEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3031

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  L+ K V  I+ G  HS+AI  +G+LY WG    G+LG G 
Sbjct: 3032 GKLGHFSRMNCD-KPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGD 3090

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P    V+ L G    Q ALG    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3091 NTTQLRP--KLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG---- 3144

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P  I+ L GV V     G   S  + ++G+V+ +G     ++      H
Sbjct: 3145 -----SEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3199

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P L+  L   +   V  G  H   +   G++Y WG N++G  G  +  V   P  VQ
Sbjct: 3200 VRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQ 3259

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G        + C  I  V+CG  H+ A
Sbjct: 3260 GL-------EGC-KISRVACGSSHSIA 3278



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 171/396 (43%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV C          L  GG  TLF +T  G V ATG    G
Sbjct: 3941 WGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQL-IGGEQTLFSITGDGKVCATGYGAGG 3999

Query: 102  QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            +LGI      +   L   I  +    V I++G  H  A++ +GE+Y WG+  +G+LG G 
Sbjct: 4000 RLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4059

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            ++      P  +E L G      A G   S  +T  G++ SWG G  GRLGHG       
Sbjct: 4060 RSP--CDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD------ 4111

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
               S  +  P+L+  L+G +V   A  +G   + CI ++  V+ +GD    K+     + 
Sbjct: 4112 ---SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 4168

Query: 278  ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P R  
Sbjct: 4169 CKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRR-- 4226

Query: 336  GPFSESPVDQICTS-----IVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
                       CT+     IV ++CG  H  A ++ G++ TWG             +  G
Sbjct: 4227 -----------CTTLQGKKIVSIACGSLHCVACTDAGEVYTWG------------DNDEG 4263

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG G       P +V   +  K  +V+CG  H+ A
Sbjct: 4264 QLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLA 4299



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 153/348 (43%), Gaps = 46/348 (13%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G ++  G N  GQLG  E     L P+    L     VQ+  G     +IT DG++   
Sbjct: 3935 SGQIWGWGHNHRGQLGGVEGAKVKL-PVSCETLATMRPVQLIGGEQTLFSITGDGKVCAT 3993

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G  + G+LG+G   +  +  PT +E +  +F ++ A+  G +  +A++  G+V SWG G 
Sbjct: 3994 GYGAGGRLGIGGTDS--VATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGE 4051

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG  S             PR I+ L G +V   AAG  HSACI   G +Y +G  
Sbjct: 4052 DGKLGHGNRSPC---------DRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKG 4102

Query: 266  AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
               ++   +     +P L+  L      +V CG     T  +T    +++WG  + G LG
Sbjct: 4103 RYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG 4162

Query: 322  IGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSH 377
             G  D    P ++   QG             ++ V CG + + A+++ G + TWG G  H
Sbjct: 4163 RGGSDGCKVPMKIDALQG-----------LGVIKVECGSQFSVALTKSGAVYTWGKGDYH 4211

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                        +LGHG +     P      +  K + ++CG  H  A
Sbjct: 4212 ------------RLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD+G+LG G   +   P++ +     S+  +ACG  H+  +T +G ++  G   FG+
Sbjct: 502 WGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGR 561

Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG+  +E+I   L P  +SGL    VV ++  +G   + A+   G +Y WG    G+LG 
Sbjct: 562 LGLGSTEDI---LTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGR 618

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G   ++    P  V+ L G+   +   G + S AV   G V +WG G   +LGHG E  +
Sbjct: 619 G--GSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHV 676

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                      PR ++ L G  V   + G  H     E G +  +G
Sbjct: 677 ---------RFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWG 713



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 104/247 (42%), Gaps = 40/247 (16%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  G+LGHG          + +  +P LI EL G  V   A G  H
Sbjct: 491 LALTSEGDVYSWGNGDFGKLGHGD---------TVTCDSPMLINELHGKSVVNVACGSHH 541

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG--YHTCVLTS 305
           SA I  +G ++ +G  +  ++          P+L+S L      +V CG     T  L  
Sbjct: 542 SAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD 601

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
            G +Y+WG  E G LG G  +   +P   +++QG             +  V CG +++AA
Sbjct: 602 TGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQG-----------LDVTRVYCGPQYSAA 650

Query: 363 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
           +   G + TWG G             G +LGHG +     P  V          +S G +
Sbjct: 651 VCKNGAVFTWGNG------------EGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSH 698

Query: 422 HTGALLE 428
           H  A  E
Sbjct: 699 HCLATTE 705



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 4/126 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+YG+LG G  E    P +    +   +  + CG  ++  + + G V+  G  +  +
Sbjct: 608 WGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYK 667

Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    E++ +  +   ++G  K V  +S G HH  A T +GEL  WG+N  GQLG G  
Sbjct: 668 LGHGTEEHVRFPRQVETLAG--KHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHT 725

Query: 161 AAKVIP 166
             K  P
Sbjct: 726 GLKAEP 731



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 22/198 (11%)

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PY 289
           + ++E +K+   + G  H   +   G VY +G+    K+   +      P LI++L    
Sbjct: 473 LADIEIIKLAAHSEGS-HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKS 531

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
              V CG +H+  +T+ GEL+TWG    G LG+GS + + +P  V G    + VD  C S
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGS 591

Query: 350 IVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
                 G   T A+++ G + +WG          DG    G+LG G       P +V+  
Sbjct: 592 ------GDAQTIALADTGSVYSWG----------DGEY--GKLGRGGSEGCKAPKLVDKL 633

Query: 409 ENVKALQVSCGFNHTGAL 426
           + +   +V CG  ++ A+
Sbjct: 634 QGLDVTRVYCGPQYSAAV 651



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 25/226 (11%)

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH--SACIDENGRVYIFGD 264
            GRL    E     F+   S+      +E EG +     A  +   S   D   +V+++G 
Sbjct: 2865 GRLRSDDEEMAANFIFLASDNEE---EEAEGQRASQVMAKKVKCGSGVKDIQTQVFVWGL 2921

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               D++   +G+  + P +   L   +  ++V G      +T  G+L+  G   NG LG+
Sbjct: 2922 NDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGL 2981

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
            G      S   V  P   + + Q     V V  G +H  A++ +GK+ +WG G       
Sbjct: 2982 GI-----SAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD----- 3031

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                   G+LGH + ++   P ++    + +   ++CG +H+ A++
Sbjct: 3032 -------GKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAII 3070


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 162/353 (45%), Gaps = 41/353 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  +R  PV+      H +  +  G   ++ L + G V+  G N+ GQ
Sbjct: 57  WGYGDRGQLGDGTWNTRTTPVMAKNL-NHVID-IHSGVRSSMALRQDGTVWTWGANENGQ 114

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI   I     P ++ GL   +  IS G  +H  A++ +G ++ WGKN NG+LG G   
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTT 172

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  LS + T  AA G+  S+A+   G V +WG  GSG LG G         
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T  + P  +  L    V   AAG  HS  I ++G V+ +G+     +      H  RP
Sbjct: 221 -TTERHVPVQVAGL--TDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRP 277

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L +   V  GGYH+  +   G +++WG N    LG+ S      P  V G     
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTG----- 332

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                   +  +S G  H+ A+ +   + WGW          G++SGGQLG G
Sbjct: 333 -----IEHVREISAGGFHSVAMKKDGTV-WGW----------GYNSGGQLGDG 369



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 20/285 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
           WG  + G+LG+G++ +   P          +KA++ G A H + L+E G V+  G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG       +  P+ ++GL  +V  I+ G ++S A+  DG ++ WG N +G+LG G   
Sbjct: 165 ELGNGTTTQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  +V  L+ +     A G   S+A+   G V +WG    G LG G         
Sbjct: 223 ERHVPV--QVAGLTDVMA--IAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTR------- 271

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T    P  ++ L+ + V +A  G+ HS  +D+ G V+ +GD +  ++       +  P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIP 327

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             ++ + +  E+  GG+H+  +   G ++ WG N  G LG G+ +
Sbjct: 328 VPVTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYN 372



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 26/257 (10%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           ++  GY+H++++   GE+Y WG    GQLG G    +  P+  K   L+ +    +  G 
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G V +WGA  +G+LG G  +++           P  +  L G+K  I+   
Sbjct: 93  RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H   + ENG V+ +G     ++          P L++ L     +  GGY++  L S 
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G ++ WG N +G LG G+    H P +V G           T ++ ++ G  H+ AI + 
Sbjct: 203 GTVWAWGVNGSGELGDGTTTERHVPVQVAG----------LTDVMAIAAGGSHSLAIRQD 252

Query: 367 KILTWGWG-GSHGTFSE 382
             + W WG  ++GT  +
Sbjct: 253 GTV-WAWGNNTYGTLGD 268



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 19/232 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G LG G+   R  PV  +      + A+A GG+H+L + + G V+A G N +G 
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGLTD--VMAIAAGGSHSLAIRQDGTVWAWGNNTYGT 265

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +   P+++  L + +V ++ G +HS A+   G ++ WG NS  QLGL   A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNAS 323

Query: 163 KVIPIP-TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +IP+P T +E +  I    +A GF  SVA+   G V  WG    G+LG G  ++  G  
Sbjct: 324 SLIPVPVTGIEHVREI----SAGGF-HSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGI- 377

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                  P L K +         +G L+   I  +  V +   +A D M  Q
Sbjct: 378 -------PTLTKAVLDTTSPDTGSGSLNPHSITSD-SVALEWPKASDNMTEQ 421


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 156/326 (47%), Gaps = 27/326 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLG+G+ +  +     SA + + +  +A       H+L LT++G V++ G  D+
Sbjct: 543 GEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDY 602

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   N      P +I  L+ +EVV ++ G+ HS+ +TVDG+L+ +G    G+LG G 
Sbjct: 603 GKLG-HGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
            A K    P +V  L      Q A G   ++ ++  G  V ++G G  G+LG G      
Sbjct: 662 SANK--KTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGS----- 714

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                T++ +P+ I  L G+  K    G   S  +  +GRV+ FG   +           
Sbjct: 715 ----CTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGP 770

Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           ++P  I  L   + ++V  G  H   LTS GE++ WG+N +G LG+G  +    P  +  
Sbjct: 771 QKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIP- 829

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAA 362
                  D    +I  +S G  H+AA
Sbjct: 830 -------DLKGKNIRQISAGRNHSAA 848



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 182/398 (45%), Gaps = 51/398 (12%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A LWG G +G+L   S      P V  +    S + + CG   T  +   G + A G   
Sbjct: 490 AYLWGGGRHGQLA-ESGRGVNVPTVTKSLA--SAQQVVCGQNCTFVVQVNGTILACGEGS 546

Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNG 153
           +G+LG+  S+++ ++L P  IS L+  VV QI+T      HS A+T  GE++ WG    G
Sbjct: 547 YGRLGMGNSDDL-FTLSP--ISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYG 603

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G    +  P   ++E L G      A GF+ S  VT  GK+ ++G G  GRLGHG 
Sbjct: 604 KLGHGNSDRQRRP--RQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLF 272
                    S ++ TP  +  LE   +   A G  H+  +  +G  V+ FGD    K+  
Sbjct: 662 ---------SANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGL 712

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                   P  I  L     +++ CG   + VLT+ G ++++G         G +     
Sbjct: 713 GSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQK 772

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 389
           P+++Q   +   +D +C        G +H  A+ S G++  WGWG          ++  G
Sbjct: 773 PQQIQA-LASHFIDDVCV-------GAEHVLALTSTGEV--WGWG----------NNVDG 812

Query: 390 QLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 425
           QLG G+      P ++    G+N++  Q+S G NH+ A
Sbjct: 813 QLGLGHSNAQREPCVIPDLKGKNIR--QISAGRNHSAA 848



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 39/283 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           + Y+WG   +GQL    ++ + + +PT  + L+    +Q   G   +  V   G +L+ G
Sbjct: 489 DAYLWGGGRHGQLA---ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACG 543

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIAAA--GFLHSACIDENGRV 259
            G  GRLG G    +         +T   I  L+G V ++IA +     HS  + ++G V
Sbjct: 544 EGSYGRLGMGNSDDL---------FTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEV 594

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
           + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T  G+L+T+G+ +
Sbjct: 595 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-RGEEVVNMACGFKHSAVVTVDGKLFTFGNGD 653

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
            G LG G+     +PERV     +  + Q       V+CG  HT  +S      W +G  
Sbjct: 654 YGRLGHGNSANKKTPERVTA-LEKHAIGQ-------VACGLNHTLVLSADGNTVWAFG-- 703

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                 DG    G+LG G+      P  ++    +   ++ CG
Sbjct: 704 ------DGDY--GKLGLGSCTAKTSPQAIDVLAGIGCKKICCG 738



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 26/161 (16%)

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           L + G     P++   L  +++VVCG   T V+   G +   G    G LG+G+ D L  
Sbjct: 501 LAESGRGVNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDL-- 558

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWK----HTAAISE-GKILTWGWGGSHGTFSEDGH 385
                  F+ SP+  +   +V+     +    H+ A+++ G++ +WG G           
Sbjct: 559 -------FTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDY--------- 602

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              G+LGHGN      P  +      + + ++CGF H+  +
Sbjct: 603 ---GKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVV 640


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 158/347 (45%), Gaps = 54/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  + 
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG  +++ + + P R++G  +   +  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G +Y  G   
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG GS D  ++P  V     E+  D+   SI   +CG   TAAI
Sbjct: 612 NGRLGHGSTDDRNTPTLV-----EALKDKQVKSI---ACGTNFTAAI 650



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 177/374 (47%), Gaps = 53/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ +ACG  H   +T+ G V++ G    G+LG   +   +  P  I  L    ++ ++ G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACG 368

Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +  +G LG GK  +  +P       L G+     + G   +
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLHISSISCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  GK+ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSI---------SIPREVESLKGLRTVRAACGVWH 478

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 479 TAAVVEVIIGNPNSNNNSSGKLFTWGDG--DKGRLGHGDKEARLVPTCVAALVEPNFCQV 536

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V+++       
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEEL------- 588

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +
Sbjct: 589 ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGSTDDRNTPTLVEALKDKQ 636

Query: 413 ALQVSCGFNHTGAL 426
              ++CG N T A+
Sbjct: 637 VKSIACGTNFTAAI 650



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 122/278 (43%), Gaps = 47/278 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E +  +  +  A G   +  VT  G+V SWG    GRLGHG +S           
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
           + P+LI  L  + +++ A G  H+  +  +G +Y +GD   +  L   G       P  +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G  D +  P  V+      
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES----- 463

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSG 388
            +  + T  V  +CG  HTAA+ E             GK+ TWG G              
Sbjct: 464 -LKGLRT--VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK------------ 508

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+LGHG+    + PT V         QV+CG + T AL
Sbjct: 509 GRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVAL 546



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 110/229 (48%), Gaps = 33/229 (14%)

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           R+G   +S I   L       P+ ++ +  + V+  A G  H+A + + G V+ +G+   
Sbjct: 285 RVGSSFDSKIDSLL-------PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYG 337

Query: 268 DKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIG 323
            ++     + A  P LI  L     E V CG YHTC +T  G+LYTWG  +  +G LG G
Sbjct: 338 GRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHG 397

Query: 324 SIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 381
             DV H  P+RV GP            I  +SCG  HTA + S GK+ T+G     GTF 
Sbjct: 398 K-DVSHWVPKRVTGPLQ-------GLHISSISCGPWHTALVTSAGKLFTFG----DGTF- 444

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
                  G LGHG+      P  V   + ++ ++ +CG  HT A++E +
Sbjct: 445 -------GVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 171/404 (42%), Gaps = 46/404 (11%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
            Q R    +G    G LGLG    R  P +        +  +  G   T  LT TG VY+
Sbjct: 8   FQERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYS 67

Query: 95  TGLNDFGQLGISE------NIGYSL------EPLRISGLKKEVVQISTGYHHSSAITVDG 142
            G N  GQ GI E       +  SL      EP      +  +V    G  H   +T +G
Sbjct: 68  CGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEG 127

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           EL   G+N++GQLG G +  K   +P  V   +G    + A  +  +V VT   +  ++G
Sbjct: 128 ELQTCGRNNSGQLGHG-EVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFG 186

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G G+LGHG  SS     RS     P  +   +G+ V   A G  H+     +G +Y F
Sbjct: 187 GNGYGQLGHGDHSS-----RS----APAALACFQGLGVLSVACGVYHTVVSVASGGLYSF 237

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           G +     L  EG  +R   +  +   S  E++ CG YHT  L+  GE+  +G N+ G L
Sbjct: 238 G-KNDHGQLGLEGGESRFTPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRNDYGQL 296

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGT 379
           G+G     H     QG   + P D     I+ V+CG  HT ++  EG++  +        
Sbjct: 297 GLG-----HRESTWQG--GQVP-DLAGLRIIQVACGSYHTISLDDEGRVYPF-------- 340

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
               G ++ GQLG G   D   P  V         QV+ GF HT
Sbjct: 341 ----GRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAAGFYHT 380



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GNG YG+LG G   SR  P   + F+   + ++ACG  HT+    +G +Y+ G ND GQL
Sbjct: 187 GNG-YGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQL 245

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G+ E       P++       V Q++ GY+H+ A++  GE+  +G+N  GQLGLG + + 
Sbjct: 246 GL-EGGESRFTPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHREST 304

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
                 +V  L+G+   Q A G   ++++   G+V  +G    G+LG G           
Sbjct: 305 W--QGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDAC----- 357

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
                P  ++ L    V   AAGF H+ C+
Sbjct: 358 ----RPCFVEGLSQSFVCQVAAGFYHTLCL 383



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 13/157 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +G  D+G+LGL   ESR+ PV    C++     ++ LACG  HT+ L+  G V A G ND
Sbjct: 237 FGKNDHGQLGLEGGESRFTPVQHRACTSV----VEQLACGYYHTVALSRAGEVVAFGRND 292

Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +GQLG+   E+     +   ++GL+  ++Q++ G +H+ ++  +G +Y +G+N++GQLG 
Sbjct: 293 YGQLGLGHRESTWQGGQVPDLAGLR--IIQVACGSYHTISLDDEGRVYPFGRNNHGQLGT 350

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           G +     P    VE LS  F  Q A GF  ++ +TG
Sbjct: 351 GTREDACRPC--FVEGLSQSFVCQVAAGFYHTLCLTG 385


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 167/395 (42%), Gaps = 41/395 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+      PV        ++ A+  GG H+L LT TG V A G N  GQ
Sbjct: 61  WGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNFSGQ 120

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    S  P+ +       +  I+ G  HS A+T  G +  WG+N +GQLG G   
Sbjct: 121 LGNGDTTNRS-TPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTT 179

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V   +G+     A G   S+AVT  G VL+WG   +G+LG+G         
Sbjct: 180 NMSTPV--GVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGT-------- 229

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
            +T   TP  +    G  +   AAG     HS  +   G    +G+ A D  L       
Sbjct: 230 -TTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNA-DGQLGNGDTTN 287

Query: 279 RRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           R   +   LP       V  GG H+  LT+ G +  WG N +G LG G+     +P  V 
Sbjct: 288 RSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVD 347

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            P   +        I  ++ G+    A++  G ++ WG             +  GQLG+G
Sbjct: 348 LPTGAT--------INAIAAGFDFGLALTTAGAVVAWG------------RNVSGQLGNG 387

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           + ++   P  V+    V    V+ G  H+ AL+  
Sbjct: 388 DTINRSTPVDVDLPAGVTITAVAAGGQHSMALVAL 422



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 148/366 (40%), Gaps = 41/366 (11%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
           V+ +     SL A   G +  +  ++T   +A G N  GQLG     G S          
Sbjct: 31  VMVTQAATMSLAAAENGPSAAIRASDT--YFAWGDNSDGQLGNGTTTGSSTPVDVYLPAG 88

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
             +  ++ G  HS A+T  G +  WG+N +GQLG G    +  P+   V+  +G      
Sbjct: 89  TTITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPV--DVDLPAGTTITAI 146

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G   S+A+T  G VL+WG    G+LG+G          +T+  TP  +    GV +  
Sbjct: 147 AAGAFHSLALTSAGTVLAWGENLHGQLGNGG---------TTNMSTPVGVSLPAGVTITA 197

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV------CG 296
            AAG  HS  +   G V  +GD +  ++       +  P  +  LP    +        G
Sbjct: 198 VAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDV-DLPAGTTITAVAAGVAG 256

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             H+  LTS G    WG+N +G LG G      +P  V  P           +I  V+ G
Sbjct: 257 AAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAG--------VTITAVAAG 308

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H+ A++  G ++ W            G +  GQLG+G       P  V+         
Sbjct: 309 GLHSLALTAAGAVVAW------------GRNVSGQLGNGTTTGSSTPVDVDLPTGATINA 356

Query: 416 VSCGFN 421
           ++ GF+
Sbjct: 357 IAAGFD 362



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 5/160 (3%)

Query: 35  LQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           L    AAL WGN   G+LG G   +R  PV        ++ A+A GG H+L LT  G V 
Sbjct: 263 LTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVV 322

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
           A G N  GQLG     G S  P+ +       +  I+ G+    A+T  G +  WG+N +
Sbjct: 323 AWGRNVSGQLGNGTTTGSS-TPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVS 381

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           GQLG G    +  P+   V+  +G+     A G + S+A+
Sbjct: 382 GQLGNGDTINRSTPV--DVDLPAGVTITAVAAGGQHSMAL 419


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 182/460 (39%), Gaps = 102/460 (22%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G G  G LG G   +    P++   F    ++++ACG  H++ + ETG VY  G    GQ
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60

Query: 103 LGISE-NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMW------------- 147
           LG  E     +L+P+R+ GL+ E VV    GY+H  A+TV G+LY W             
Sbjct: 61  LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANK 120

Query: 148 ----------GKNSN----------------GQLG-----------LGKKAAKVIPIPTK 170
                     G NS+                G  G            G       P P  
Sbjct: 121 EYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEV 180

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           V  L  +   + A G+  S+AVT  G+V SWG     +LG G            ++  P+
Sbjct: 181 VTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHR---------YNQSVPQ 231

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
           L+  L+GV +  A  G  HS  +   G VY FG     ++     +  R P  +  L  +
Sbjct: 232 LVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPA 291

Query: 291 EE-----------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           EE           + CG +HT  L   G ++TWGS E G  G  +       +   G  +
Sbjct: 292 EEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNA----YEDWATGQRA 347

Query: 340 ESPVDQICTS------------IVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 386
           E     IC +            I  VSCG  H  A + +G + +WGWG            
Sbjct: 348 EKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWG------------ 395

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           S G LGHGN    + P ++      + +Q + G  H+ A+
Sbjct: 396 SYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV 435



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 102/238 (42%), Gaps = 38/238 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +  +LGLG   ++  P +    +   + +  CG  H++ L+  G VY  GL  FGQ
Sbjct: 211 WGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQ 270

Query: 103 L--GISENIGYSLEPLRISGLK----------KEVVQISTGYHHSSAITVDGELYMWGKN 150
           L  G+S +  +   P R+  L           + +VQI+ G HH+ A+ V G ++ WG  
Sbjct: 271 LGHGVSSDERF---PRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSA 327

Query: 151 SNGQLG-------------LGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGG 196
             GQ G               K AA +   P  +  C  G      + G   ++A    G
Sbjct: 328 EYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDG 387

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            V SWG G  G LGHG     L          P+LI+ + G ++   AAG  HS  ++
Sbjct: 388 SVYSWGWGSYGVLGHGNHRFQL---------VPKLIRRIGGERIVQTAAGAKHSLAVN 436



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 53/283 (18%)

Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  ++GL+  +VV+++ GY  S A+T  GE+Y WG N   QLGLG +  + +P    V  
Sbjct: 178 PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVP--QLVPH 235

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L G+    A  G + SV ++  G V ++G G  G+LGHG          S+ E  PR ++
Sbjct: 236 LQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGV---------SSDERFPRRVE 286

Query: 234 EL----EGV-----KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA------ 278
            L    EGV     ++   A G  H+  +  +G V+ +G     +   Q G +A      
Sbjct: 287 ALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQ---QGGTNAYEDWAT 343

Query: 279 -----RRPSLISKLPYS----------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                +  ++I   P S            V CG  H       G +Y+WG    G LG G
Sbjct: 344 GQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHG 403

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           +      P+ ++    E         IV  + G KH+ A++ G
Sbjct: 404 NHRFQLVPKLIRRIGGE--------RIVQTAAGAKHSLAVNAG 438


>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 171/358 (47%), Gaps = 46/358 (12%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYM 146
           ETG V+      FG+   ++NI     P +   LK +V  QIS G  H++ IT +G L+M
Sbjct: 1   ETGAVFT-----FGKSKFADNI-----PSKFW-LKNDVPSQISCGDEHTALITKNGRLFM 49

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +G N+ GQLGLG K    +  PT V+ L       AA G   ++  TG G+V S G    
Sbjct: 50  FGSNNWGQLGLGSKV--TVNKPTCVKALKSEKVLLAACGRNHTLICTGEGRVFSSGGNSE 107

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
           G+LG G               T R I  L+ +  +K+ AAG   SA + E+G+++++GD 
Sbjct: 108 GQLGLGD---------CEERTTFRRIHALDSLGPIKMLAAGSNTSAALTESGKLFMWGDN 158

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              ++   + +HA  P  +S       V CG YH+ ++T+ G LYT+G  ++G LG+   
Sbjct: 159 TEGQIGLGKESHAPWPQEVSVGAPVSWVSCGYYHSALVTAAGALYTFGERDSGKLGL--- 215

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG------KILTWGWGGSHGT 379
               + E++       PV  I   +  V+CG  HT A++ G         T G+      
Sbjct: 216 ----TTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTRRRPRCTRGFAVDLAG 271

Query: 380 F---SED-----GHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           F   SED     G    GQLGHG  V +   P +V   +  +  QV+CG NH+  + +
Sbjct: 272 FLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVRQVACGENHSAVITD 329



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 51/348 (14%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++LK D+      G     + +   R F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 19  SKFWLKNDVPSQISCGDEHTALITKNGRLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 76

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
              +   ACG  HTL  T  G V+++G N  GQLG+    E   +     RI  L     
Sbjct: 77  SEKVLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFR----RIHALDSLGP 132

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +  ++ G + S+A+T  G+L+MWG N+ GQ+GLGK++    P P +V    G      + 
Sbjct: 133 IKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLGKESHA--PWPQEVSV--GAPVSWVSC 188

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G+  S  VT  G + ++G   SG+LG   E       +      P+ ++ + G  V+  A
Sbjct: 189 GYYHSALVTAAGALYTFGERDSGKLGLTTE-------QLPRHRVPQPVRSI-GEPVRQVA 240

Query: 245 AGFLHSA------------------CIDENGRVYIFGDRAVDKMLFQEGN--------HA 278
            G  H+                    +D  G +++  DR     L Q G          +
Sbjct: 241 CGGGHTVALTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFES 300

Query: 279 RRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           R P L+   K     +V CG  H+ V+T GG LYT+G   +G LG+G 
Sbjct: 301 RLPRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGD 348



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 153/359 (42%), Gaps = 60/359 (16%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +T+ G ++  G N++GQLG+   +  + +P  +  LK E V ++  G +H
Sbjct: 31  ISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVN-KPTCVKALKSEKVLLAACGRNH 89

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVT 193
           +   T +G ++  G NS GQLGLG    +      ++  L  +   K  A G   S A+T
Sbjct: 90  TLICTGEGRVFSSGGNSEGQLGLGDCEERTTF--RRIHALDSLGPIKMLAAGSNTSAALT 147

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             GK+  WG    G++G G+ES           + P   +   G  V   + G+ HSA +
Sbjct: 148 ESGKLFMWGDNTEGQIGLGKES-----------HAPWPQEVSVGAPVSWVSCGYYHSALV 196

Query: 254 DENGRVYIFGDRAVDKM--LFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGG--- 307
              G +Y FG+R   K+    ++    R P  +  +     +V CGG HT  LT GG   
Sbjct: 197 TAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTR 256

Query: 308 ----------------------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
                                  L+T+G  + G LG G+        R+   F +  V Q
Sbjct: 257 RRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVRQ 316

Query: 346 ICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
                  V+CG  H+A I++G +L     G HG            LG  N  +   PT+
Sbjct: 317 -------VACGENHSAVITDGGLLYTFGDGRHGKLG---------LGDENFTNQFKPTL 359



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 36/220 (16%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+   G++GLG       P   S     S   ++CG  H+  +T  G +Y  G  D G
Sbjct: 154 MWGDNTEGQIGLGKESHAPWPQEVSVGAPVSW--VSCGYYHSALVTAAGALYTFGERDSG 211

Query: 102 QLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG------------------ 142
           +LG++ E +     P  +  + + V Q++ G  H+ A+T  G                  
Sbjct: 212 KLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTRRRPRCTRGFAVDLAG 271

Query: 143 -------ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
                   L+ +G    GQLG G    +   +P  VE       +Q A G   S  +T G
Sbjct: 272 FLWLSEDRLFTFGLGQFGQLGHGTFVFES-RLPRLVEHFKKGRVRQVACGENHSAVITDG 330

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
           G + ++G G  G+LG G E+        T+++ P L    
Sbjct: 331 GLLYTFGDGRHGKLGLGDEN-------FTNQFKPTLCSRF 363



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 30  WISSTLQRRFAALWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
           W+S    R F   +G G +G+LG G+   ESR  P +   F+K  ++ +ACG  H+  +T
Sbjct: 274 WLSE--DRLFT--FGLGQFGQLGHGTFVFESRL-PRLVEHFKKGRVRQVACGENHSAVIT 328

Query: 88  ETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQ 127
           + G +Y  G    G+LG+  EN     +P   S   K  VQ
Sbjct: 329 DGGLLYTFGDGRHGKLGLGDENFTNQFKPTLCSRFLKYGVQ 369


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 174/387 (44%), Gaps = 45/387 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ +YG+           PV     E  ++ A+A G   +L +   G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LGI   +  S  P+++ GLK +VV +S G +HS A+  DG ++ WG N +G+LG     
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              + +P +V+ LS +    A  GF  S+A+   G V  WG G   + G    S      
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                Y P  I+ L   KV   AAG+ HS  + ++G V+++G  +   +    G H+   
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLL 335

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L     V  G  H+  LT  G ++ WG+N  G LG           R    FS +
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLG-----------RENNSFSLN 384

Query: 342 PVDQI--CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
              ++    ++V ++ G  HT AI     + W WG ++           GQLG+G     
Sbjct: 385 LPYKVKWLDNVVAIATGGSHTLAIKRDGTV-WSWGANN----------KGQLGNGTYKSS 433

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             PT V    N  A+ V  G  H+ A+
Sbjct: 434 YIPTCVKGLNN--AVLVEAGSQHSLAV 458



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 189/429 (44%), Gaps = 78/429 (18%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+  YG LG    E  +  V     +  ++ A+A G  H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLLVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372

Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  EN  +SL  P ++  L   VV I+TG  H+ AI  DG ++ WG N+ GQLG G  
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNG-- 428

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG------------------ 202
             K   IPT V+ L+     +A  G + S+AV   G V  WG                  
Sbjct: 429 TYKSSYIPTCVKGLNNAVLVEA--GSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPL 486

Query: 203 -------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELEGVK 239
                        AGG   +          G G +     F  S+     +LI+ L+ +K
Sbjct: 487 PIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LDNIK 545

Query: 240 -VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
            V+  AAG+ HS  +  +G V+ +GD  +D    +  N + +P  I  L    +V  G Y
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKK-KYLNFSEKPVKIKGLSGVVKVAAGKY 604

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  L   G +++WG N  G LG G+ +    P RV+G            ++V ++ G  
Sbjct: 605 HSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKG----------LNNVVAIAAGDY 654

Query: 359 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           H+ A+  +G +  W            G +  GQLG  N      P  V   +NV A  ++
Sbjct: 655 HSMALKKDGTVWVW------------GSNIRGQLGRRNIEFSTVPLKVEKLDNVVA--IA 700

Query: 418 CGFNHTGAL 426
            G  H+ AL
Sbjct: 701 AGDTHSVAL 709



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 49/388 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+ +    PV     +   + A++ G  H+L L + G V+  G  ++GQ
Sbjct: 66  WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
                   ++  P+++  L K +V I+ G+  S A+  DG ++ WG N++G+LG+G  + 
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K   +P KV+ L  +    A  G   S+A+   G V SWG    G LG+          R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227

Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            T +YT   P  +K L  V + I+A GF HS  ++++G V+I+G   ++K    + +++ 
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  I  L     +  G  H+  L   G ++ WG N  G LG    +      +V+G   
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLLVQVKG--- 340

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    ++V V+ G  H+ A+++   + W W          G+++ GQLG  N+   
Sbjct: 341 -------LKNVVAVAAGRLHSVALTKNGTI-WAW----------GNNAFGQLGRENNSFS 382

Query: 400 IH-PTIVNFGENVKALQVSCGFNHTGAL 426
           ++ P  V + +NV A  ++ G +HT A+
Sbjct: 383 LNLPYKVKWLDNVVA--IATGGSHTLAI 408



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 25/206 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           +++++A G  H+L +   G V++ G  D       + + +S +P++I GL   VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKKKYLNFSEKPVKIKGLSG-VVKVAAG 602

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            +HS A+  DG ++ WG N+ GQLG G +    +P+  +V+ L+ +     A G   S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
           +   G V  WG+   G+LG           R   E++  P  +++L+ V V I AAG  H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705

Query: 250 SACIDENGRVYIFG---DRAVDKMLF 272
           S  + ++G V+++G   DR + K + 
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEIL 731



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 135/307 (43%), Gaps = 42/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +V+    G  H+ AI  DG ++ WG N  GQLG G      IP+  +V+ L  +    A 
Sbjct: 43  KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKDVVAVSA- 99

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   S+A+   G V  W     G   +GQ  S     R  +  TP  +KEL+ + V I 
Sbjct: 100 -GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELKNI-VAI- 147

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG+  S  +  +G V+ +G     ++       +  P  +  L     V  G YH+  L
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLAL 207

Query: 304 TSGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
              G +++WG NE+G LG    +   +  P RV+G           + ++ +S G  H+ 
Sbjct: 208 KRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKG----------LSDVIAISAGGFHSI 257

Query: 362 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
           A+++   + W WGG  G   ++G           D  YI P  + +    K + ++ G+ 
Sbjct: 258 ALNKDGAV-WIWGG--GIIEKNGKI---------DNSYI-PVRIRWLN--KVVAIAAGYR 302

Query: 422 HTGALLE 428
           H+ AL +
Sbjct: 303 HSIALKD 309



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+ E+ + PV       +++ A+A G  H++ L + G V+  G N  GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   NI +S  PL++  L   VV I+ G  HS A+  DG +++WG   +  L     ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733

Query: 163 KVIPIPTK 170
             IP+  K
Sbjct: 734 SSIPVQIK 741


>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
          Length = 1060

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 182/410 (44%), Gaps = 76/410 (18%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-------ETGCVYA 94
           WG   +  LG G  + +   P V   F    +  ++CG  H+  L          G V+ 
Sbjct: 61  WGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAGTVFT 120

Query: 95  TGLNDFGQLG---------ISENIGYS-----------LEPLRIS-GLKKEVVQISTGYH 133
            GL + G+LG         IS+ IG              +P+ +S GL+  VV IS G +
Sbjct: 121 FGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGAN 180

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H+   T DG LY WG  ++G LG G  A + IP+  KV      F  + A G   S+A+ 
Sbjct: 181 HTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPV--KVIFPQDTFISKCAAGARHSMALD 238

Query: 194 GGGKVLSWGAGG-----------SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
             G + SWG GG           +GRLG       LG  RS   +TP LI+  +  +V  
Sbjct: 239 IKGNIWSWGYGGIVHSIFHIIHRNGRLG-------LGSTRSC--FTPNLIEIFDTYEVFQ 289

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
            + G  HSAC+D  G VY +G     K+ L    +    P+++  L   +  +V CG  +
Sbjct: 290 ISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGN 349

Query: 300 TCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           T  L+S G++Y WGS     LG     D L S       +S  PV +     + V+ G  
Sbjct: 350 TLALSSSGKIYQWGST----LGFNKQTDGLIS----HTVYSPEPVAETGFKNIFVTSGPY 401

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
             AAI+  G +LTWG G            +G +LGHG+  D++ P  V++
Sbjct: 402 SFAAINIFGDLLTWGLG------------TGYRLGHGDSKDHVIPKFVSY 439



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 140/330 (42%), Gaps = 63/330 (19%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           GRLGLGS  S + P +   F+ + +  ++CG +H+  L   G VY  G    G+LG+   
Sbjct: 263 GRLGLGSTRSCFTPNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNI 322

Query: 109 IGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI-- 165
           +   LEP  +  LK   ++Q+S G  ++ A++  G++Y WG      LG  K+   +I  
Sbjct: 323 LSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGST----LGFNKQTDGLISH 378

Query: 166 ----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS----- 216
               P P        IF       F    A+   G +L+WG G   RLGHG         
Sbjct: 379 TVYSPEPVAETGFKNIFVTSGPYSF---AAINIFGDLLTWGLGTGYRLGHGDSKDHVIPK 435

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIA------------------AAGFLHSACIDENGR 258
            + +LR T  Y   L+K  +    K+                   A G  H A +  NG 
Sbjct: 436 FVSYLR-TRVYIDNLLKTYDEAAFKVEDTVEKTVNPYDERRIQQIAVGDAHGALLTCNGT 494

Query: 259 VYIFG--------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
           VY +G              +   + +LF   NH    S I+K      + CG  HT  +T
Sbjct: 495 VYTWGANNGTGCNSTTEPLENYCEPILF---NHFS--SKITK------IACGSSHTLAVT 543

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             G L++WGSNE+G LG G +     P+ V
Sbjct: 544 INGLLFSWGSNESGQLGHGDLRSRVVPDSV 573



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 112/264 (42%), Gaps = 48/264 (18%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI--- 253
            VLSWG      LG G E +       TSE+ PR+I    G +V   + G  HSA +   
Sbjct: 57  NVLSWGKVPFNCLGQGVEVN-------TSEF-PRVIPFFSGRRVTQVSCGDYHSAVLVCS 108

Query: 254 -DEN---GRVYIFG-----------DRAVDKMLFQEGNHAR-RPSLISKLPYSE------ 291
             EN   G V+ FG           D   + +  Q G   +  PS  + +P         
Sbjct: 109 SRENINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGL 168

Query: 292 -----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
                 + CG  HT V T+ G LY WG   +G LG GS+   + P +V  P         
Sbjct: 169 RNNVVTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIFPQD------- 221

Query: 347 CTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
            T I   + G +H+ A+  +G I +WG+GG   +     H +G +LG G+      P ++
Sbjct: 222 -TFISKCAAGARHSMALDIKGNIWSWGYGGIVHSIFHIIHRNG-RLGLGSTRSCFTPNLI 279

Query: 406 NFGENVKALQVSCGFNHTGALLEY 429
              +  +  Q+SCG +H+  L  +
Sbjct: 280 EIFDTYEVFQISCGDSHSACLDRF 303



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 120/298 (40%), Gaps = 52/298 (17%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           ++ + QI+ G  H + +T +G +Y WG N+        +  +    P      S   TK 
Sbjct: 473 ERRIQQIAVGDAHGALLTCNGTVYTWGANNGTGCNSTTEPLENYCEPILFNHFSSKITK- 531

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKV 240
            A G   ++AVT  G + SWG+  SG+LGHG        LRS     P  +  +E  + V
Sbjct: 532 IACGSSHTLAVTINGLLFSWGSNESGQLGHGD-------LRS--RVVPDSVSNIENCINV 582

Query: 241 KIAAAGFLHSACI----------DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPY 289
               AG  +S CI          DE G +++FG     K+ L +    A        +  
Sbjct: 583 ---FAGIDNSGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPREVNITG 639

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
              V  G  H+  LTS G LY  G+   G LG G+     +       F +   D     
Sbjct: 640 VHSVALGPMHSLALTSDGTLYAAGAGSGGRLGTGNTTNSFT-------FVQVKTDH---K 689

Query: 350 IVLVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
            V V  G  H+ AIS    L +GWG G + TF E               D + PTI+N
Sbjct: 690 FVAVGAGASHSLAISMENDL-YGWGEGKYLTFDE---------------DVLEPTIIN 731



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 21/257 (8%)

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLND-FGQLGISENIGYSLEPLRISGLKKE 124
           + +++  ++ +A G AH   LT  G VY  G N+  G    +E +    EP+  +    +
Sbjct: 469 NPYDERRIQQIAVGDAHGALLTCNGTVYTWGANNGTGCNSTTEPLENYCEPILFNHFSSK 528

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
           + +I+ G  H+ A+T++G L+ WG N +GQLG G   ++V+P     I   +   +GI  
Sbjct: 529 ITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNIENCINVFAGIDN 588

Query: 180 KQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
                    +++     G +  +G+   G+LG G+         +++  TPR   E+   
Sbjct: 589 SGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGEN-------MTSAVMTPR---EVNIT 638

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CG 296
            V   A G +HS  +  +G +Y  G  +  ++    GN     + +      + V    G
Sbjct: 639 GVHSVALGPMHSLALTSDGTLYAAGAGSGGRL--GTGNTTNSFTFVQVKTDHKFVAVGAG 696

Query: 297 GYHTCVLTSGGELYTWG 313
             H+  ++   +LY WG
Sbjct: 697 ASHSLAISMENDLYGWG 713



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 147/365 (40%), Gaps = 47/365 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAH-TLFLTETGCVY 93
           WG+ + G+LG G L SR  P   S  E + +   A        C  +H  +   E G ++
Sbjct: 551 WGSNESGQLGHGDLRSRVVPDSVSNIE-NCINVFAGIDNSGCICSVSHENMMKDEYGTLW 609

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
             G +  G+LG+ EN+  ++   R   +   V  ++ G  HS A+T DG LY  G  S G
Sbjct: 610 VFGSSTCGKLGLGENMTSAVMTPREVNITG-VHSVALGPMHSLALTSDGTLYAAGAGSGG 668

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G        +  K +     F    A G   S+A++    +  WG G         
Sbjct: 669 RLGTGNTTNSFTFVQVKTD---HKFVAVGA-GASHSLAISMENDLYGWGEG--------- 715

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL----HSACIDENGRVYIFGDRAVDK 269
               L F     E  P +I  +     +           HS  + ++G +  FGD +  +
Sbjct: 716 --KYLTFDEDVLE--PTIINTIPSTTGQAKVVALAVAANHSLVLSQSGNLSGFGDNSYGQ 771

Query: 270 M-LFQEGNHARRPSLISKLPYSEE--VVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
           + +F     +    +   LP + +  +VC     Y +     GG+ ++WG  ++  LGIG
Sbjct: 772 LGVFLSMKSSANNFIKMPLPVNVQGNIVCVATSRYFSSCSNLGGDAFSWGLAKDHRLGIG 831

Query: 324 SI--DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
                +++ P  +    + S +  +     L S  +KHT+      IL +     H  +S
Sbjct: 832 ETKSKIIYKPTPIA---NTSMIGDLMDKFELDS--YKHTSMSGYETILNYFLDELH--YS 884

Query: 382 EDGHS 386
            D HS
Sbjct: 885 SDPHS 889


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVTNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+  +    P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFETSD----PKVIENIRDQTISYISCGESHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 169/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G+         +G    T+   P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQ---------IGLKNVTNVCVPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSDPKV----IENIRDQ---TISYISCGESHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFSRFIVKL-VACG 357



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 42/310 (13%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  +  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +   +   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQICTSIVLVSCGWKH 359
             +T+ GELY +G  ENG LG+        P ++ G   +   V +I   ++ V+CG +H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 418
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSDPKVIENIRDQTISYISC 302

Query: 419 GFNHTGALLE 428
           G +HT  + +
Sbjct: 303 GESHTALITD 312


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 179/377 (47%), Gaps = 59/377 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNTNIELVA 370

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 428

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G +  I+A G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGVLGHGDTKSV---------SKPREVESLKGHRTVISACG 479

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 480 VWHTAAVVEIMVGNPSSSNCSSGKLFTWGD--GDKGRLGHGDKEAKLVPTCVAALVDPNF 537

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
             V CG   T  LT+ G +YT GS   G LG    D    P RV+G  ++S V++I    
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPTRVEGKLAKSFVEEI---- 592

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
              +CG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   +
Sbjct: 593 ---ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALK 637

Query: 410 NVKALQVSCGFNHTGAL 426
           + +   ++CG N T  +
Sbjct: 638 DKQVKSIACGTNFTATI 654



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 151/347 (43%), Gaps = 54/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 336 WGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 395

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 396 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 454

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
               K +  P +VE L G  T  +A G   + AV               GK+ +WG G  
Sbjct: 455 D--TKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDK 512

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 513 GRLGHGDKEAKL---------VPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGS-- 561

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 562 --PVYGQLGN----PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 615

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG G  D  +SP  V     E+  D+   SI   +CG   TA I
Sbjct: 616 NGRLGHGDTDDRNSPTLV-----EALKDKQVKSI---ACGTNFTATI 654



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 119/270 (44%), Gaps = 31/270 (11%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G   +  VT  G++ SWG    GRLGHG +S +L        
Sbjct: 302 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 353

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 354 -HPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 412

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  V+      
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHR 472

Query: 342 PVDQIC-----TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            V   C      ++V +  G   ++  S GK+ TWG G              G+LGHG+ 
Sbjct: 473 TVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDK------------GRLGHGDK 520

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              + PT V    +    +V+CG + T AL
Sbjct: 521 EAKLVPTCVAALVDPNFCRVACGHSLTVAL 550



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 363 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 421

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I       SCG  HTA + S G++ T+G     GTF        G LGHG+      P
Sbjct: 422 SSI-------SCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDTKSVSKP 462

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   +  + +  +CG  HT A++E +
Sbjct: 463 REVESLKGHRTVISACGVWHTAAVVEIM 490


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 171/370 (46%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  P  I  L+  V +QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P  V   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--- 296

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + ++I  V+CG +HT A+  S GK+  +G G            S GQLG  +
Sbjct: 297 -----MELMGSTITQVACGNRHTLALVPSRGKVYAFGLG------------SSGQLGTRS 339

Query: 396 DVDYIHPTIV 405
               + P +V
Sbjct: 340 TKSLMLPQVV 349



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 44/287 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P ++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P+LI EL+   +   + G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A +K + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             G LG+ S + L   + P R+           +   +  ++CG  H+  IS+   + +G
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRL--------TTLLGIPLAAIACGGNHSFLISKSGAV-FG 221

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           W          G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 222 W----------GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 258



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 24/138 (17%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
           ++V CG  HT  LT+ G++Y  GSN+   LG       H     +        D +   I
Sbjct: 43  QQVACGHRHTLFLTATGKVYACGSNDYSQLG-------HDLPTKRPQLIPELQDYV---I 92

Query: 351 VLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG 408
           + +SCG +H+ A+S+ G++L+WG             +  GQLGH  + + +  P +V   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATEKEIVQLPKVVRQL 140

Query: 409 ENVKALQVSCGFNHTGAL 426
            +   +Q++CG NH+ AL
Sbjct: 141 VSKTVVQIACGNNHSLAL 158



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 19/127 (14%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           + SG ELY WGS  +G LG+G I+        Q P++        T++  V+CG +HT  
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPD------TAVQQVACGHRHTLF 54

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           ++           + G     G +   QLGH  D+    P ++   ++   +Q+SCG  H
Sbjct: 55  LT-----------ATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRH 101

Query: 423 TGALLEY 429
           + AL ++
Sbjct: 102 SLALSDW 108


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 163/348 (46%), Gaps = 48/348 (13%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + ETG V+      FG+   ++NI           LK +V ++I+ G  H++ IT +G L
Sbjct: 9   IPETGAVFT-----FGKSKFADNIPSKF------WLKNDVPLKIACGDEHTALITKNGRL 57

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +M+G N+ GQLGLG K  + +  PT V+ L        A G   ++  T  GKV S G  
Sbjct: 58  FMFGSNNWGQLGLGSK--RTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGN 115

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG 263
             G+LG G       F R         I   + +  VK+ AAG   SA + E+G+++++G
Sbjct: 116 SEGQLGLGDCEERTTFQR---------IHAFDSLGPVKMLAAGSNTSAALTESGKLFMWG 166

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D    ++   + +HA  P  +        V CG YH+  +T+ G LYT+G  ++G LG+ 
Sbjct: 167 DNTEGQIGLAKESHAPSPQEVDVGGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLT 226

Query: 324 SIDVLHSPERVQGPFSESP--VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
           +          Q P    P  V  I   +  V+CG  HT A++E ++ T+G G       
Sbjct: 227 T---------EQLPRHRVPQMVKSIKEPVTQVACGGGHTVALTEERLFTFGLG------- 270

Query: 382 EDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                  GQLGHG  + +   P  V   +  +  QV+CG NHT  + +
Sbjct: 271 -----QFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITD 313



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 159/326 (48%), Gaps = 35/326 (10%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++LK D+ L    G     + +   R F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 29  SKFWLKNDVPLKIACGDEHTALITKNGRLF--MFGSNNWGQLGLGSKRTVNKPTCVKALK 86

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
              +  +ACG  HTL  T  G V+++G N  GQLG+    E   +     RI        
Sbjct: 87  TEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ----RIHAFDSLGP 142

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V  ++ G + S+A+T  G+L+MWG N+ GQ+GL K++    P P +V+    I     + 
Sbjct: 143 VKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESH--APSPQEVDVGGPI--SWVSC 198

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G+  S  VT  G + ++G   SG+LG   E       +      P+++K ++    ++A 
Sbjct: 199 GYYHSAFVTADGALYTFGECDSGKLGLTTE-------QLPRHRVPQMVKSIKEPVTQVAC 251

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE--EVVCGG 297
            G  H+  + E  R++ FG     ++     +F+    +R P  +         +V CG 
Sbjct: 252 GGG-HTVALTEE-RLFTFGLGQFGQLGHGTFIFE----SRLPRPVEHFKKGRVCQVACGE 305

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
            HT V+T GG LYT+G   +G LG+G
Sbjct: 306 NHTAVITDGGLLYTFGDGRHGKLGLG 331



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 154/335 (45%), Gaps = 38/335 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           +ACG  HT  +T+ G ++  G N++GQLG+      + +P  +  LK E V+ ++ G +H
Sbjct: 41  IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVN-KPTCVKALKTEKVLLVACGRNH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVT 193
           +   T  G+++  G NS GQLGLG    +      ++     +   K  A G   S A+T
Sbjct: 100 TLICTAQGKVFSSGGNSEGQLGLGDCEERTTF--QRIHAFDSLGPVKMLAAGSNTSAALT 157

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             GK+  WG    G++G  +ES           + P   +   G  +   + G+ HSA +
Sbjct: 158 ESGKLFMWGDNTEGQIGLAKES-----------HAPSPQEVDVGGPISWVSCGYYHSAFV 206

Query: 254 DENGRVYIFGDRAVDKM--LFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGEL 309
             +G +Y FG+    K+    ++    R P ++   K P ++ V CGG HT  LT    L
Sbjct: 207 TADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEPVTQ-VACGGGHTVALTEE-RL 264

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
           +T+G  + G LG G+  +  S  R+  P       ++C     V+CG  HTA I++G +L
Sbjct: 265 FTFGLGQFGQLGHGTF-IFES--RLPRPVEHFKKGRVCQ----VACGENHTAVITDGGLL 317

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
                G HG            LG  N  +   PT+
Sbjct: 318 YTFGDGRHGKLG---------LGEENFTNQFKPTV 343



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 12/209 (5%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+   G++GL        P          +  ++CG  H+ F+T  G +Y  G  D G
Sbjct: 164 MWGDNTEGQIGLAKESHAPSPQEVDV--GGPISWVSCGYYHSAFVTADGALYTFGECDSG 221

Query: 102 QLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG++ E +     P  +  +K+ V Q++ G  H+ A+T +  L+ +G    GQLG G  
Sbjct: 222 KLGLTTEQLPRHRVPQMVKSIKEPVTQVACGGGHTVALTEE-RLFTFGLGQFGQLGHGTF 280

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +   +P  VE        Q A G   +  +T GG + ++G G  G+LG G+E+     
Sbjct: 281 IFESR-LPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGEEN----- 334

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
              T+++ P +        V+ A  G  H
Sbjct: 335 --FTNQFKPTVCSRFLKYGVQAATCGGCH 361



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  ++++P VCS F K+ ++A  CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVL 365


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 168/370 (45%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E+     P          ++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 6   WGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  VV QI+ G  HS A+T  G++  WG N  GQ+G   
Sbjct: 66  HQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-HS 121

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               VI +P  +  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 122 TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-- 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  + G+ +   A G  HS  I ++  V+ +G     ++   +  +  
Sbjct: 180 ----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA 235

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            PS +  +       V CG  ++  LT+ G ++T G+   G LG G  +    P  V   
Sbjct: 236 YPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMV--- 292

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + ++I  V+CG +HT A+  S G++ ++G G S            GQLG  N
Sbjct: 293 -----IELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS------------GQLGTRN 335

Query: 396 DVDYIHPTIV 405
            +    P +V
Sbjct: 336 TISQTLPKVV 345



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 20/301 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D+ +LG   L ++ RP+     + + +  +ACG  H++ LTE G + + G ND GQ+
Sbjct: 61  GNNDHHQLG-HELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 104 GIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G S +N    L  +    + + VVQI+ G +HS A+T  GELY WG N  GQLG+  ++ 
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSP 176

Query: 163 KVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K +P    P ++  + GI     A G   S  ++    V  WG    G+LG   E     
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ---- 232

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                +   P  +K +  + V+    G  +S  +   G V+  G     ++     N+  
Sbjct: 233 -----NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEM 287

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P ++ +L  S   +V CG  HT  L  SGG +Y++G   +G LG  +      P+ V G
Sbjct: 288 IPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIG 347

Query: 337 P 337
           P
Sbjct: 348 P 348



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 36/282 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG  S+GQLGLG    + I +P+++E       +Q A G   ++ +T  G+V + G 
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               +LGH   +             P  I EL+   V   A G  HS  + E G++  +G
Sbjct: 63  NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
           D    ++     N       I +   S  VV   CG  H+  LTS GELY+WGSN  G L
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQIC---TSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           G+       SP+ +  P S +P+         +  ++CG  H+  IS+   + +GW    
Sbjct: 172 GV------QSPKDL--PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAV-FGW---- 218

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                 G ++ GQLG  ++ +  +P+ +     +    V+CG
Sbjct: 219 ------GKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCG 254



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 28/158 (17%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           E      PS I   P S  +++ CG  HT  LT+ G++Y  G+N++  LG       H  
Sbjct: 20  ENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLG-------HEL 72

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
           P +   P  E         ++ ++CG +H+ A++E G+IL+WG             +  G
Sbjct: 73  PTKRPLPIPELQ----AYVVIQIACGSRHSMALTEWGQILSWG------------DNDCG 116

Query: 390 QLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           Q+GH  D D I  P I+ F  +   +Q++CG NH+ AL
Sbjct: 117 QVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL 154


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 180/392 (45%), Gaps = 60/392 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV  +  +  ++  ++ G  H L L   G  +A G N FGQ
Sbjct: 224 WGDNRYGQLGDGTTVRRAAPVRVANLD--AVTHISAGAYHALALRADGTAWAWGYNAFGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  +L P+ I GL  E   +  G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 282 LGDGTTVQRTL-PVLI-GLT-ETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+      ++G  T  A  GF  SVA+   G   SWG    G+LG            
Sbjct: 339 SAVPLH---AGMTGGVTLVA--GFRHSVALGADGTAWSWGDNVFGQLGD----------- 382

Query: 223 STSEYTPRLIK-ELEGVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
             + + PR+   ++ G+ +  A A  G LH+  +  NGR++ +GD    ++    GN  +
Sbjct: 383 --TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQL----GNGTQ 436

Query: 280 RPSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           + S +  LP +      V  G  HT  L   G +++WG+N+ G LG G+     +P +V 
Sbjct: 437 QNSSL-PLPVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVP 495

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           G           T +  ++ G  H+ A+ S G +  WGWG           +  GQLG G
Sbjct: 496 G----------LTGVTSIATGDYHSLALRSNGTV--WGWG----------FNRYGQLGDG 533

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             VD   P  V+   N+  + ++ G  H+ AL
Sbjct: 534 TTVDRTQPVQVSGLTNI--VSIAAGGGHSLAL 563



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 152/372 (40%), Gaps = 46/372 (12%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           R    +W  GD     LGS      PV         + A+  GG+ +L L   G V+A G
Sbjct: 166 RADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWG 225

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            N +GQLG    +     P+R++ L   V  IS G +H+ A+  DG  + WG N+ GQLG
Sbjct: 226 DNRYGQLGDGTTV-RRAAPVRVANLDA-VTHISAGAYHALALRADGTAWAWGYNAFGQLG 283

Query: 157 LGKKAAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G    + +P+      L G+  T+    G   S+AV   G V +WG     +LG G   
Sbjct: 284 DGTTVQRTLPV------LIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNL- 336

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                   TS   P       GV +    AGF HS  +  +G  + +GD    ++     
Sbjct: 337 --------TSSAVPLHAGMTGGVTL---VAGFRHSVALGADGTAWSWGDNVFGQLGDTTF 385

Query: 276 NHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  ++ L     +   G  HT +L + G L+ WG N  G LG G+          
Sbjct: 386 QPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQ-------- 437

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
               S  P+    T I  VS G +HTAA+  +G + +W            G +  GQLG 
Sbjct: 438 ---NSSLPLPVNLTGITSVSSGHRHTAALRLDGTVWSW------------GTNQYGQLGD 482

Query: 394 GNDVDYIHPTIV 405
           G   D   P  V
Sbjct: 483 GTRTDRSTPVQV 494



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 154/333 (46%), Gaps = 36/333 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+ + +  PV  +     S  ++A G  ++L L E G V+A G N  GQ
Sbjct: 74  WGFNRLGQLGDGTTQDKAAPVQVAGVA--SAVSVAAGDQYSLALDENGDVWAWGDNASGQ 131

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +    +P R+SGL + V  +++G+ H+ A+  DG ++ WG N + QLG      
Sbjct: 132 LG-DGTLTPRAQPRRVSGLTQGV-SLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTR 189

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +PIP  V  LS I    A  G   S+A+   G V +WG    G+LG G          
Sbjct: 190 SPVPIP--VPGLSDIVAVVA--GGSSSLALRADGTVWAWGDNRYGQLGDGT--------- 236

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +     P  +  L+   V   +AG  H+  +  +G  + +G  A  ++   +G   +R  
Sbjct: 237 TVRRAAPVRVANLD--AVTHISAGAYHALALRADGTAWAWGYNAFGQL--GDGTTVQRTL 292

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P LI  L  +  VV G YH+  + + G ++ WG N    LG G++             S 
Sbjct: 293 PVLIG-LTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNL-----------TSSA 340

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
            P+    T  V +  G++H+ A+ ++G   +WG
Sbjct: 341 VPLHAGMTGGVTLVAGFRHSVALGADGTAWSWG 373



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+   R  PV         + ++A G  H+L L   G V+  G N +GQ
Sbjct: 472 WGTNQYGQLGDGTRTDRSTPVQVPGLT--GVTSIATGDYHSLALRSNGTVWGWGFNRYGQ 529

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  + +P+++SGL   +V I+ G  HS A+  DG ++ +G N +GQLG G +  
Sbjct: 530 LGDGTTVDRT-QPVQVSGLTN-IVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTW 587

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++P+  +   L  + +  A  G   S+A+   G V +WG   SG+LG G          
Sbjct: 588 TILPV--QAVGLGNVVSLAA--GKMYSLALRADGTVWAWGYNASGQLGVGT--------- 634

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P  +  L    +    AG  HS  +  +G V+ +G     ++     ++   P 
Sbjct: 635 TQGSAVPLQVSGLS--AITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTPG 692

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           L+  +  +  +  G  H+  + + G L+ WG N +G LG G       P +VQG
Sbjct: 693 LVVSMSNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQVQG 746



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 167/403 (41%), Gaps = 70/403 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG  + + R  PV  +        A   G  HT+ L   G ++A G N+ GQ
Sbjct: 372 WGDNVFGQLGDTTFQPRMAPVQVTGLALGRADA-TSGQLHTVMLGANGRLWAWGDNNQGQ 430

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       SL  P+ ++G    +  +S+G+ H++A+ +DG ++ WG N  GQLG G + 
Sbjct: 431 LGNGTQQNSSLPLPVNLTG----ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRT 486

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG------QES 215
            +  P+  +V  L+G+     A G   S+A+   G V  WG    G+LG G      Q  
Sbjct: 487 DRSTPV--QVPGLTGV--TSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPV 542

Query: 216 SILGF---------------LRS------------------TSEYTPRLIKELEGVKVKI 242
            + G                LRS                  T  +T   ++ +    V  
Sbjct: 543 QVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGLGNVVS 602

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            AAG ++S  +  +G V+ +G  A  ++       +  P  +S L     +  G YH+  
Sbjct: 603 LAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLSAITSITAGTYHSLA 662

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           L S G ++ WG N  G LG G+ D   +P  V             ++   +  G  H+ A
Sbjct: 663 LRSDGWVWAWGFNFEGQLGNGTSDNRLTPGLVVS----------MSNATAIFAGDLHSLA 712

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           +     L W W          G +S GQLG G+ V+   P  V
Sbjct: 713 VRADGTL-WAW----------GLNSHGQLGTGDTVEAWFPVQV 744



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 31/335 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  Y +LG G+L S   P+        +L A   G  H++ L   G  ++ G N FGQ
Sbjct: 323 WGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVA---GFRHSVALGADGTAWSWGDNVFGQ 379

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P++++GL       ++G  H+  +  +G L+ WG N+ GQLG G +  
Sbjct: 380 LG-DTTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQN 438

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+P  +  ++ + +     G   + A+   G V SWG    G+LG G          
Sbjct: 439 SSLPLPVNLTGITSVSS-----GHRHTAALRLDGTVWSWGTNQYGQLGDGTR-------- 485

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L GV     A G  HS  +  NG V+ +G     ++         +P 
Sbjct: 486 -TDRSTPVQVPGLTGVTS--IATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPV 542

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +  GG H+  L S G ++ +G N +G LG G+      P +  G      
Sbjct: 543 QVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVG------ 596

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                 ++V ++ G  ++ A+ ++G +  WG+  S
Sbjct: 597 ----LGNVVSLAAGKMYSLALRADGTVWAWGYNAS 627



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 42/294 (14%)

Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           +G +   V+++ G +HS A+  +G ++ WG N  GQLG G    K  P+      ++G+ 
Sbjct: 46  AGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQ-----VAGVA 100

Query: 179 TK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-E 236
           +    A G + S+A+   G V +WG   SG+LG G           T    PR +  L +
Sbjct: 101 SAVSVAAGDQYSLALDENGDVWAWGDNASGQLGDGTL---------TPRAQPRRVSGLTQ 151

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
           GV +   A+GF H+  +  +G V+ +GD   +++       +  P  +  L     VV G
Sbjct: 152 GVSL---ASGFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAG 208

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G  +  L + G ++ WG N  G LG G+     +P RV              ++  +S G
Sbjct: 209 GSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAPVRVAN----------LDAVTHISAG 258

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
             H  A+ ++G    W            G+++ GQLG G  V    P ++   E
Sbjct: 259 AYHALALRADGTAWAW------------GYNAFGQLGDGTTVQRTLPVLIGLTE 300


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 179/370 (48%), Gaps = 31/370 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+L L   E        + +   +  ++ ++CG  HTL+L E G + + G N +
Sbjct: 4   WGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N   S+E  +IS L+ + +V IS G +HS A++ +G +Y WG  S GQLG G 
Sbjct: 64  GQLGRKSN-NSSIE--QISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGN 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +++    P K+  L      Q + G   S+A++  G+V SWG    G+LG G  S I+ 
Sbjct: 121 LSSRNF-TPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLG--SQII- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                ++ TP+L+K L+G+ +    AG   S  +  +G V+ +G     ++ F+      
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKG 231

Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             +P  ++ L       + CG  HT VL+  G +YT+G + +G LG  S +    P++++
Sbjct: 232 TFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIE 291

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTA--AISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                         +  V+CG  HT     S  +I+++G G      + +  S   +L  
Sbjct: 292 ---------DYAGQVSQVACGRYHTLLYVFSCNRIVSFGKGSLRPQDNTEC-SDEAELPS 341

Query: 394 GNDVDYIHPT 403
             D+  + PT
Sbjct: 342 EFDISSLVPT 351



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 151/344 (43%), Gaps = 49/344 (14%)

Query: 92  VYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYM 146
           +Y  G N FGQL +     E + +       S   +E VQ +S G  H+  +  DG L  
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQS---QECVQKVSCGEKHTLYLLEDGTLLS 57

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G+N  GQLG     + +     ++  L        + G   SVAV+  G + SWG G  
Sbjct: 58  CGQNPYGQLGRKSNNSSI----EQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSE 113

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G  SS          +TP+ I  L   K+   + G  HS  + E+GRV+ +G   
Sbjct: 114 GQLGTGNLSS--------RNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNK 165

Query: 267 VDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             ++ L  +  +   P L+  L   P  + V  GG  +  L+  G ++ WG N  G LG 
Sbjct: 166 CGQLGLGSQIINQATPQLVKSLKGIPLVQ-VTAGGSQSFALSMSGTVFAWGKNNAGQLGF 224

Query: 323 GSIDVLHSPERVQGPFSESPVDQICT-SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFS 381
            S       + ++G F    V+ +    +  +SCG +HTA +S+         GS  TF 
Sbjct: 225 KS-------DPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSK--------DGSVYTFG 269

Query: 382 EDGHSSGGQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           +D H   GQLG   GN    +   I ++   V   QV+CG  HT
Sbjct: 270 DDTH---GQLGQNSGNQTS-VPQKIEDYAGQVS--QVACGRYHT 307



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 40/291 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG N  GQL L +   +V+         S    ++ + G + ++ +   G +LS G 
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG           R ++  +   I  LE   +   + G  HS  + + G +Y +G
Sbjct: 61  NPYGQLG-----------RKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWG 109

Query: 264 DRAVDKMLFQEGNHARR---PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
           D +  ++    GN + R   P  I+ L  ++  ++ CG +H+  L+  G +++WG N+ G
Sbjct: 110 DGSEGQL--GTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCG 167

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
            LG+GS  +  +  ++       P       +V V+ G   + A+S  G +  WG     
Sbjct: 168 QLGLGSQIINQATPQLVKSLKGIP-------LVQVTAGGSQSFALSMSGTVFAWG----- 215

Query: 378 GTFSEDGHSSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 426
                   ++ GQLG  +D       P  VN   N+    +SCG  HT  L
Sbjct: 216 -------KNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVL 259



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 76/180 (42%), Gaps = 36/180 (20%)

Query: 259 VYIFGDRAVDKMLFQEGN----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
           +Y +GD    ++   +G     H +           ++V CG  HT  L   G L + G 
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICT----SIVLVSCGWKHTAAIS-EGKIL 369
           N  G LG  S              + S ++QI +    +IV +SCG  H+ A+S EG I 
Sbjct: 61  NPYGQLGRKS--------------NNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIY 106

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           +WG G            S GQLG GN       P  +    N K +Q+SCG  H+ AL E
Sbjct: 107 SWGDG------------SEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE 154


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  120 bits (301), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 101/339 (29%), Positives = 149/339 (43%), Gaps = 68/339 (20%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLK--ALACGGAHTLFLTETGCVYATGLND 99
           WG+G  G+LG G+LES   P +   FE K SL+  ++A GG HT+ LT  G VY+ G ND
Sbjct: 185 WGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHTVALTVCGNVYSFGGND 244

Query: 100 FGQLGI-----------------------------------SENIGYSLEPLRISGLKKE 124
             QLG+                                   S +  ++ +  + S     
Sbjct: 245 SCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDR 304

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++++S   + S+AI+  G LY WG+  NG+LG G    +    P +V  L G      +L
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQ--STPKQVMSLHGHTIVDMSL 362

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   S+A+T  G+V SWG G +G+LGHG  +S         + TP+ I+  +   +K+ +
Sbjct: 363 GGGHSMALTKRGEVFSWGRGENGQLGHGTFTS--------QQMTPKQIQAFQNKTIKVIS 414

Query: 245 AGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE-------- 291
           AG  HS  ID NG ++      +G   V   L   G+    P LI  L  S         
Sbjct: 415 AGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGD-INSPVLIKSLNNSNGSNNSNSS 473

Query: 292 ------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
                  V  G  H    T  G+LY+WG      LG+ +
Sbjct: 474 AGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLAN 512



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 103/403 (25%), Positives = 171/403 (42%), Gaps = 74/403 (18%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--- 124
           F K  +  ++ G  HT  +T+ G +Y  G    G+LG      YS EP  +   + +   
Sbjct: 158 FLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYS-EPRLVEFFETKPSL 216

Query: 125 -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV------------ 171
            VV ++ G  H+ A+TV G +Y +G N + QLGLG  ++     P  V            
Sbjct: 217 RVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSN 276

Query: 172 --------ECLSGIFTKQA-------------ALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
                      S +F KQ              +    +S A++  G + +WG G +GRLG
Sbjct: 277 SSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLG 336

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG          S  + TP+ +  L G  +   + G  HS  + + G V+ +G R  +  
Sbjct: 337 HGD---------SLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWG-RGENGQ 386

Query: 271 LFQEGNHARR--PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSI 325
           L      +++  P  I        + +  GGYH+  + + G ++ WG  + G LG+  S+
Sbjct: 387 LGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSL 446

Query: 326 DVL---HSPERVQGPFSESPVDQICTS----IVLVSCGWKHTAAISE-GKILTWGWGGSH 377
           D L   +SP  ++   + +  +   +S     + VS G++H  A +E G + +WG G   
Sbjct: 447 DSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCG--- 503

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCG 419
                    SG +LG  N+ + + P  +N    N K    SCG
Sbjct: 504 ---------SGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCG 537



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 15/191 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD GRLG G    +  P    +   H++  ++ GG H++ LT+ G V++ G  + GQ
Sbjct: 327 WGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQ 386

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG        + P +I   + + ++ IS G +HS AI  +G ++ WG+   G LG+    
Sbjct: 387 LGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSL 446

Query: 162 AKVIPIPTKV--------------ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
             +  I + V                 +G      + GF+ +VA T  G + SWG G   
Sbjct: 447 DSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGN 506

Query: 208 RLGHGQESSIL 218
           RLG   E + L
Sbjct: 507 RLGLANEENQL 517



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 134/313 (42%), Gaps = 47/313 (15%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLS 175
           RI  LK++VV ISTG  H+S IT  G LY WG    G+LG G   +   P +    E   
Sbjct: 155 RIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKP 214

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
            +     A G + +VA+T  G V S+G   S +LG       LG + S+   TP+L+   
Sbjct: 215 SLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLG-------LGNISSSYYSTPQLVTFQ 267

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
               +  + +    S  I  N    +F     +K   Q  N   R   I KL       C
Sbjct: 268 SPQSLSNSNS---SSPIIMSNSTSTLF-----NKQQQQSSNKIDR---IIKLS------C 310

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
               +  ++  G LYTWG  +NG LG G   +  +P++V      + VD        +S 
Sbjct: 311 STNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVD--------MSL 362

Query: 356 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKA 413
           G  H+ A+++ G++ +WG G              GQLGHG      + P  +   +N   
Sbjct: 363 GGGHSMALTKRGEVFSWGRG------------ENGQLGHGTFTSQQMTPKQIQAFQNKTI 410

Query: 414 LQVSCGFNHTGAL 426
             +S G  H+ A+
Sbjct: 411 KVISAGGYHSIAI 423



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 17/141 (12%)

Query: 43  WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G+ G+LG G+  S+   P    AF+  ++K ++ GG H++ +   G ++A G  D+G
Sbjct: 379 WGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYG 438

Query: 102 QLGIS---ENIGYSLEPLRISGLK-------------KEVVQISTGYHHSSAITVDGELY 145
            LG+S   +++G    P+ I  L              +  + +S+G+ H+ A T +G+LY
Sbjct: 439 VLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLY 498

Query: 146 MWGKNSNGQLGLGKKAAKVIP 166
            WG  S  +LGL  +  ++IP
Sbjct: 499 SWGCGSGNRLGLANEENQLIP 519


>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 140/327 (42%), Gaps = 26/327 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G LG G+   R  PV        ++ A+A G  HTL LT TG + A G N FG+
Sbjct: 111 WGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGE 170

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       + EP+ ++      +  I+ G  HS A+T  G +  WGKN+ GQLG G  A
Sbjct: 171 LGDGTTTARN-EPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA 229

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V+   G      A G   S A+T  G VL+WG   SG++G G         
Sbjct: 230 NSTTPV--DVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGT-------- 279

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T   TP  +    G  V   A G  HS  +   G V  +G  +  ++       +  P
Sbjct: 280 -TTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTP 338

Query: 282 SLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             +  LP    +       G H+  LTS G +  WG N +G LG G+     +P  V  P
Sbjct: 339 VDV-NLPPDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRSTPVDVNLP 397

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAIS 364
                     T++  +  G  H+ A++
Sbjct: 398 PG--------TTVTAIDNGDDHSMALT 416



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 161/389 (41%), Gaps = 37/389 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G+LG G+      PV        ++ A+A   A++  LT TG V A G N  G+
Sbjct: 59  WGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNNTGGE 118

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N   +  P+ +       V  I+ G  H+ A+T  G L  WG N  G+LG G   
Sbjct: 119 LGDGTNTDRT-TPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGELGDGTTT 177

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A+  P+P  V    G      A G   S+A+T  G VL+WG    G+LG G  +      
Sbjct: 178 ARNEPVPVNVPA--GTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA------ 229

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +  TP  +    G  V   A G  +S  +   G V  +G  +  ++   +G    R 
Sbjct: 230 ---NSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQV--GDGTTTDRS 284

Query: 282 SLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           + +   LP    V  + GG  H+  LTS G +  WG N +G LG G+     +P  V   
Sbjct: 285 TPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVN-- 342

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
               P D   T+I     G    A  S G IL WG             +S G+LG G   
Sbjct: 343 ---LPPDTTITAIT-AHDGSHSLALTSTGTILAWGL------------NSSGELGDGTTT 386

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +   P  VN         +  G +H+ AL
Sbjct: 387 NRSTPVDVNLPPGTTVTAIDNGDDHSMAL 415



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 35/132 (26%)

Query: 309 LYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVD---QICTSIVLVSCGWKHTAAI- 363
           + TWG N+ G LG G +ID            S +PVD      T+I  ++    ++ A+ 
Sbjct: 56  VLTWGENDFGQLGDGTTID------------SSTPVDVDLPAGTTITAIAGSDANSFALT 103

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQV----S 417
           S G +L W            G+++GG+LG G + D   P  V    G  V A+ V    +
Sbjct: 104 STGAVLAW------------GNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHT 151

Query: 418 CGFNHTGALLEY 429
                TGALL +
Sbjct: 152 LALTSTGALLAW 163


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 162/336 (48%), Gaps = 27/336 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P     FE  S+   A G  HTLFLT+ G VY+ G ND+
Sbjct: 4   WGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDY 63

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +SGL    ++ ++ G  HS A++  GE++ WG ++ GQLG  +
Sbjct: 64  GQLGHDQP---RKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG-HQ 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P  ++ L+     Q A G   SVA+T  G++  WGA   G+LG G       
Sbjct: 120 LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGT------ 173

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +  E TP  +  L G+   + A G  H+  + ++G V+ +G     ++   +    +
Sbjct: 174 --ITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKK 231

Query: 280 RPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L  S    + CG   +  LT  G +++ G+   G LG G       P +V   
Sbjct: 232 FPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQV--- 288

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTW 371
                ++ + ++I  +SCG +H+ A   S G++ ++
Sbjct: 289 -----LELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 40/283 (14%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG   +G+LGLG    + +  P  ++        +AALG   ++ +T  GKV S G+
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH Q               P+L+  L+   +   A G +HS  +   G V+ +G
Sbjct: 61  NDYGQLGHDQPRK-----------RPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWG 109

Query: 264 DRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                ++  Q G   +  P LI  L   +  ++  G  H+  LT+ GE++ WG+N+ G L
Sbjct: 110 SDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQL 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICT----SIVLVSCGWKHTAAISEGKILTWGWGGS 376
           G+G+I           P+  +P   +C+       L++CG  HT A+S+   + +GW   
Sbjct: 170 GLGTI----------TPYESTPT-TVCSLSGIPFALIACGANHTFAVSKSGAV-FGW--- 214

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                  G +  GQLG  + V    PT +    N +   +SCG
Sbjct: 215 -------GKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCG 250



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 42  LWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG  D+G+LGLG++      P    +        +ACG  HT  ++++G V+  G N  
Sbjct: 160 VWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNIN 219

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+++ +     P ++  L+   V+ IS G   S+ +T+DG ++  G    GQLG G 
Sbjct: 220 GQLGLNDTVSKKF-PTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGG 278

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
            + ++  +P +V  L G    Q + G + S+A V   G+V S+
Sbjct: 279 TSNEI--LPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 32/233 (13%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +  WG+   G LG       LG +     +TP+ +   E   V  AA G  H+  + ++G
Sbjct: 1   MFGWGSTIHGELG-------LGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDG 53

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSE-EVVCGGYHTCVLTSGGELYTWGSN 315
           +VY  G     ++   +    +RP L+S L  YS   V CG  H+  L+  GE+++WGS+
Sbjct: 54  KVYSCGSNDYGQLGHDQPR--KRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSD 111

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWG 374
             G LG      L    ++    ++  V QI       + G +H+ A++  G+I  WG  
Sbjct: 112 NYGQLGHQLGGTLQIVPKLIKSLAKYQVVQI-------AAGQRHSVALTNAGEIFVWG-- 162

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
                      +  GQLG G    Y   PT V     +    ++CG NHT A+
Sbjct: 163 ----------ANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAV 205


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 26/333 (7%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLN 98
           +L G G  GRLG G       P +  +  K  +KA  + CG  H++ ++  G VY  G  
Sbjct: 69  SLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRG 128

Query: 99  DFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             G LG     NI   L    ++ LK  V Q+    +HS  +T DG++Y +G   +G+LG
Sbjct: 129 YKGFLGHKNQNNIRSFLLVDALASLK--VTQVCAARNHSLVVTSDGQVYSFGFPKHGRLG 186

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G  A + +P  T +E L G    Q       +  +T  G+V  WG+G  G+LG G   S
Sbjct: 187 HGDDAYRRLP--TMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNES 244

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                     + P L++ LEG  +K    G+  +A I+  G ++ +G     ++   +  
Sbjct: 245 ---------HFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEE 295

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           +   PSL++ L       + CG  H   ++    LYTWG N  G LG G     H P  V
Sbjct: 296 NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVV 355

Query: 335 Q----GPFSESPVDQICTSIVLVSCGWKHTAAI 363
                 P  ++P       +  VSCG  HTA++
Sbjct: 356 ATLLLAPSEDAPPR---GRVAKVSCGANHTASL 385



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 151/348 (43%), Gaps = 49/348 (14%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSN 152
           GL   G+LG  +   Y  +P  +  L K+ ++   +  GY HS  I+  G++Y  G+   
Sbjct: 72  GLGSTGRLGHGDERKYR-DPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYK 130

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G LG   K    I     V+ L+ +   Q       S+ VT  G+V S+G    GRLGHG
Sbjct: 131 GFLG--HKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHG 188

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
            ++             P +I+ L G KV        H+A + + G+V+++G    D  L 
Sbjct: 189 DDAY---------RRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGS-GTDGKLG 238

Query: 273 QEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           Q  N +   P L+  L     + + CG      +   G L+TWG    G LG G  +   
Sbjct: 239 QGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRT 298

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSG 388
            P  V    +E P+  I       +CG  H AAIS+  +L TWG             ++ 
Sbjct: 299 VPSLVTA-LAEVPIRAI-------ACGAGHMAAISDMNVLYTWG------------KNAE 338

Query: 389 GQLGHGNDVDYIHPTIV---------NFGENVKALQVSCGFNHTGALL 427
           GQLGHG+  D   PT+V         +     +  +VSCG NHT +L+
Sbjct: 339 GQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLV 386



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 24/236 (10%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
           H+L +T  G VY+ G    G+LG  ++  Y   P  I GL+ K+VVQ +    H++ +T 
Sbjct: 164 HSLVVTSDGQVYSFGFPKHGRLGHGDD-AYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTD 222

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
            G+++MWG  ++G+LG G   +   P+   V  L G   K    G++ + A+   G + +
Sbjct: 223 AGQVFMWGSGTDGKLGQGDNESHFAPV--LVRALEGKGIKSIQCGYDFAAAINVEGHLFT 280

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLGHG E          +   P L+  L  V ++  A G  H A I +   +Y
Sbjct: 281 WGHGLGGRLGHGDEE---------NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLY 331

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKL---PYSE--------EVVCGGYHTCVLTS 305
            +G  A  ++   + +    P++++ L   P  +        +V CG  HT  L S
Sbjct: 332 TWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLVS 387



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 25/155 (16%)

Query: 279 RRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           R P+L+  L      ++ VVCG +H+ V++S G++YT G    G LG  + + + S   V
Sbjct: 88  RDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKGFLGHKNQNNIRSFLLV 147

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
               +   V Q+C +         H+  + S+G++ ++G+               G+LGH
Sbjct: 148 DA-LASLKVTQVCAA-------RNHSLVVTSDGQVYSFGF------------PKHGRLGH 187

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G+D     PT++      K +Q +C   H   L +
Sbjct: 188 GDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTD 222


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 180/386 (46%), Gaps = 48/386 (12%)

Query: 50  RLGLGSLESRWRP--VVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGI 105
           R G G L    RP  V  + F K +    A  G       + +TG V+      FG+   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP  I       +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T+ GELYT+G  ENG LG+ +  +++  SP+RV G       
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG------- 278

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP 402
             I   ++ V+CG  HT  ++E  +  +G G              GQLG G  + +   P
Sbjct: 279 --IPDKVIQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEP 324

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
            I++  ++ K   +SCG NHT  + +
Sbjct: 325 KIIDRIKDQKISHISCGENHTALMTD 350



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K D+ +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +         IG+   P  I   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G     
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G+  S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285

Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
           +A  G  H+  + E   VY      FG   +   LF+       P +I ++   +   + 
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 161/357 (45%), Gaps = 52/357 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N+ GQLGLG    +            G FT     KQ + G   S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQLSAGANTS 190

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEV--TVGKPISWISCGYYH 239

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGGGHTVVLTE 298

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAIS 364
              +Y +G  + G LG+G+     S  ++        +D+I    I  +SCG  HTA ++
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKI--------IDRIKDQKISHISCGENHTALMT 349

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           + G + T+G  G HG            LG  N  +   PT+  NF +    L ++CG
Sbjct: 350 DIGLMYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLKFTVQL-IACG 395



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 109/259 (42%), Gaps = 52/259 (20%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G     PS I K     ++ 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT--PSDIIK-----QLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V           +   I  +S
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT----------VGKPISWIS 234

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENV 411
           CG+ H+A ++ +G++ T+G                G+LG  N   +++  P  V  G   
Sbjct: 235 CGYYHSAFVTTDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPD 281

Query: 412 KALQVSCGFNHTGALLEYV 430
           K +QV+CG  HT  L E V
Sbjct: 282 KVIQVACGGGHTVVLTEKV 300



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F K +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVF 402


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 158/332 (47%), Gaps = 39/332 (11%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      +  +IS G  H+  +T +G+LY++G N+ GQLG+  
Sbjct: 19  FGKSKFAENI-----PSKFWLKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGV-- 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +A   I  PT V+ L       AA G   ++  T  GK+ S G    G+LG G  +    
Sbjct: 72  EAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTS 131

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F +  S +T +        K+K  +AG   SA +  +G+++++GD +  ++  ++G    
Sbjct: 132 F-QEISFFTAQY-------KIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYC 183

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGP 337
            P  +        + CG YH+  +T  GELYT+G  ENG LG+    I     P+RV G 
Sbjct: 184 TPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLG- 242

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                   +   + +VSCG +HT A++E ++ T+G G              GQLGHG  +
Sbjct: 243 --------LSGKVTMVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGTFI 282

Query: 398 DYIH-PTIVNFGENVKALQVSCGFNHTGALLE 428
              H P  V+     K   V+CG NHT  + E
Sbjct: 283 FETHIPKAVDALTKKKIRYVTCGENHTAIITE 314



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 47/301 (15%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LG+ +  +  +P    A +   +   ACG  HTL  TE G +Y++G N  G
Sbjct: 60  VFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEG 119

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  S + +     + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K 
Sbjct: 120 QLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEK- 178

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +   P KV+  +G      + G+  S  VT  G++ ++G   +G+LG       L  
Sbjct: 179 -GTIYCTPQKVD--TGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPP 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------------- 263
            +      P+ +  L G KV + + G  H+  + E   VY FG                 
Sbjct: 229 DKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETH 286

Query: 264 -DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             +AVD +  +            K+ Y   V CG  HT ++T  G LYT+G   +G LG+
Sbjct: 287 IPKAVDALTKK------------KIRY---VTCGENHTAIITEKGLLYTFGDGRHGKLGL 331

Query: 323 G 323
           G
Sbjct: 332 G 332



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 146/320 (45%), Gaps = 51/320 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++CG  HT+ +T  G +Y  G N++GQLG+      S +P  +  LK E VV  + G HH
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAIS-KPTCVKALKSEKVVLAACGRHH 100

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G+LY  G NS GQLGLG  A +     T  + +S  FT     KQ + G   S
Sbjct: 101 TLVYTEQGKLYSSGGNSEGQLGLGDTAGR-----TSFQEIS-FFTAQYKIKQLSAGSNMS 154

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G+         LG  + T   TP+ +    G  +   + G+ H
Sbjct: 155 AALTVDGKLFMWGDNSEGQ---------LGLEKGTIYCTPQKVD--TGKPIAWISCGYYH 203

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----------CGGYH 299
           SA + ++G +Y FG+        + G     P  I K    + V+          CGG H
Sbjct: 204 SAFVTQDGELYTFGEP-------ENGKLGLPPDKIKKHKKPQRVLGLSGKVTMVSCGGEH 256

Query: 300 TCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           T  +T   E+YT+G  + G LG G+ I   H P+ V     +         I  V+CG  
Sbjct: 257 TIAVTE-KEVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKK--------KIRYVTCGEN 307

Query: 359 HTAAISEGKILTWGWGGSHG 378
           HTA I+E  +L     G HG
Sbjct: 308 HTAIITEKGLLYTFGDGRHG 327



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHH 134
           ++CGG HT+ +TE   VY  GL  FGQLG    I  +  P  +  L KK++  ++ G +H
Sbjct: 250 VSCGGEHTIAVTEKE-VYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENH 308

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKK--AAKVIPI 167
           ++ IT  G LY +G   +G+LGLG++    + +PI
Sbjct: 309 TAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPI 343



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P++CS F K +++++ACGG H L  
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G G +G+LG G+   E+   P    A  K  ++ + CG  HT  +TE G +Y  G    
Sbjct: 268 FGLGQFGQLGHGTFIFETHI-PKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRH 326

Query: 101 GQLGI-SENIGYSLEPLRISGLKKEVVQ 127
           G+LG+  EN      P+  S   K  VQ
Sbjct: 327 GKLGLGEENFTNQFVPILCSNFLKFTVQ 354


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 181/370 (48%), Gaps = 47/370 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++++ACG  H   +T+ G V++ G+++ G+LG   ++  S +P  I  L    V+ I+ G
Sbjct: 207 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 265

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
             H+ A+++ GELY WG+ ++  LGL G +  +    P K+   L GI   + A G   +
Sbjct: 266 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 324

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             ++  G++ ++G G  G LGHG   ++           P+ ++ L+GV+ K  A G  H
Sbjct: 325 AIISSAGQLFAYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 375

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           +A I E          +G+++ +GD    K+   +      P+ +  L   +  +V C  
Sbjct: 376 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 435

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             T VLT  G ++T GS E+G LG   +    S   ++GP     V +I       S G 
Sbjct: 436 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREI-------SSGS 487

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H A ++  GK+ TWG G            + GQLG G+ VD  +PT+V   E+ +   +
Sbjct: 488 SHIAVLTMNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSI 535

Query: 417 SCGFNHTGAL 426
           +CGFN T A+
Sbjct: 536 ACGFNFTMAI 545



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 51/327 (15%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+ L K+  + S G H +   T   ++++WG+     L  G  +   + +P  +     I
Sbjct: 148 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 205

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +  A G + +  VT  G+V SWG    GRLGH           S S   P++I+ L  
Sbjct: 206 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 256

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            +VK  A G  H+  +  +G +Y +G+      L+  G+  +R        +        
Sbjct: 257 TRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLW--GDQYQRSQWFPHKLFGPLDGISI 314

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            ++ CG +HT +++S G+L+ +G    G LG G    +  P++V+               
Sbjct: 315 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKG--------VRA 366

Query: 351 VLVSCGWKHTAAISE-----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             ++CG  HTAAI E           GK+ TW            G +  G+LGH +    
Sbjct: 367 KAIACGPWHTAAIVERMGTVKSNAPSGKLFTW------------GDADRGKLGHADKKMK 414

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
           + PT V    +    QVSC    T  L
Sbjct: 415 LVPTCVEPLNDFDFAQVSCAKAQTIVL 441



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG    + +  P             ++C  A T+ LT TG V+  G  + G+
Sbjct: 398 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457

Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG  +SE+    L    I G LK E V +IS+G  H + +T++G+++ WGK + GQLGLG
Sbjct: 458 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 513

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
               +    PT VE L        A GF  ++A+
Sbjct: 514 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 545



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 36/298 (12%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKV 198
           D + YM  K +   +   K + + I +  K+  + ++ +  ++++ G   +   T    +
Sbjct: 114 DLDYYM-EKVTPDVVNRVKHSCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGATSLKDI 172

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             WG      L HG  S     L       PRL+     + V+  A G  H+A + + G 
Sbjct: 173 FVWGEVPGNVLDHGDVSKANVSL-------PRLLNTTHIIDVQSVACGEKHAAIVTKQGE 225

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ +G     ++  +       P +I  L  +  + +  G  HTC ++  GELY WG   
Sbjct: 226 VFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGT 285

Query: 317 NGCLGIGSIDVLHS---PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
           + CLG+       S   P ++ GP      D I  SI+ ++CG  HTA IS  G++  +G
Sbjct: 286 H-CLGLWGDQYQRSQWFPHKLFGPL-----DGI--SILKIACGHWHTAIISSAGQLFAYG 337

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
                GTF        G LGHG+ +    P  V   + V+A  ++CG  HT A++E +
Sbjct: 338 ----DGTF--------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 383



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 141/344 (40%), Gaps = 50/344 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG     S   P +  +     +KA+A G  HT  ++ +G +Y    G +  
Sbjct: 229 WGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCL 288

Query: 101 G----QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G    Q   S+   + L  PL   G+   +++I+ G+ H++ I+  G+L+ +G  + G L
Sbjct: 289 GLWGDQYQRSQWFPHKLFGPL--DGI--SILKIACGHWHTAIISSAGQLFAYGDGTFGVL 344

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGG 205
           G G      +  P +VE L G+  K  A G   + A+             GK+ +WG   
Sbjct: 345 GHGDTL--TVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDAD 402

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH  +   L          P  ++ L        +     +  +   G V+  G +
Sbjct: 403 RGKLGHADKKMKL---------VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSK 453

Query: 266 AVDKMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
              ++    GN     + I       K  +  E+  G  H  VLT  G+++TWG    G 
Sbjct: 454 EHGRL----GNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 509

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           LG+G        +R      E+  D+   SI   +CG+  T AI
Sbjct: 510 LGLGDY-----VDRSYPTLVEALEDKQVHSI---ACGFNFTMAI 545


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 27/311 (8%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           A G  H L L     V+A G N  GQLG      G   EP++ + +   V  +S G  HS
Sbjct: 35  ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQ-ALVNLPVDLVSCGKEHS 93

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S+GQLG GK   ++  IP K++ L+GI   Q + G+  S+A++  
Sbjct: 94  LAVCHKGKVFAWGVGSDGQLGTGK-FEEICFIPQKIKALTGIKIIQISCGYYHSLALSKD 152

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    G+LG GQE          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 153 GQVFSWGKNSHGQLGLGQEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 204

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
           +G  + +G+ +  ++ F   N    + +P  +  L       + CG  HT VLT   +++
Sbjct: 205 SGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVF 264

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEGKI 368
           T+G N  G LG   +     P+ V+G     PV QI        CG  HT A   + G++
Sbjct: 265 TFGDNSFGQLGHNGVSQTTGPQLVEG--IGGPVSQI-------DCGSYHTLAYVYTTGQV 315

Query: 369 LTWGWGGSHGT 379
           +++G   SH +
Sbjct: 316 VSFGREPSHTS 326



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 12/274 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG     S  +P    A     +  ++CG  H+L +   G V+A G+   GQL
Sbjct: 54  GDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQL 113

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G  +       P +I  L   +++QIS GY+HS A++ DG+++ WGKNS+GQLGLG++  
Sbjct: 114 GTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFP 173

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG   +G+L     + ++    
Sbjct: 174 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLV---- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y PR +  L+ + V   + G+ H+A + +N +V+ FGD +  ++     +    P 
Sbjct: 229 --QSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTGPQ 286

Query: 283 LISKL--PYSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +  P S ++ CG YHT   + + G++ ++G
Sbjct: 287 LVEGIGGPVS-QIDCGSYHTLAYVYTTGQVVSFG 319



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 38/308 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G  H+  +  +  ++  G NS GQLG  ++ A     P  ++ L  +     + 
Sbjct: 31  LLQAASGERHALLLLTNQVVHACGDNSGGQLG--RRGAPSGKQPEPIQALVNLPVDLVSC 88

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   GKV +WG G  G+LG G+   I         + P+ IK L G+K+   +
Sbjct: 89  GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEIC--------FIPQKIKALTGIKIIQIS 140

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
            G+ HS  + ++G+V+ +G  +  ++ L QE      P  +  L   P ++ V  GG H+
Sbjct: 141 CGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQ-VAAGGAHS 199

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--PFSESPVDQICTSIVLVSCGWK 358
             L+  G  + WG+N  G L     +VL     VQ   P S   +  +   +V +SCG++
Sbjct: 200 FALSLSGTSFGWGNNSAGQLAFSGNNVL-----VQSYKPRSVGALKNL--GVVYISCGYE 252

Query: 359 HTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           HTA +++  ++ T+            G +S GQLGH        P +V  G      Q+ 
Sbjct: 253 HTAVLTQNDQVFTF------------GDNSFGQLGHNGVSQTTGPQLVE-GIGGPVSQID 299

Query: 418 CGFNHTGA 425
           CG  HT A
Sbjct: 300 CGSYHTLA 307



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 21/243 (8%)

Query: 43  WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG G  E   + P    A     +  ++CG  H+L L++ G V++ G N  G
Sbjct: 105 WGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHG 164

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQL     
Sbjct: 165 QLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGN 224

Query: 161 AAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              V    P  V  L  +     + G+E +  +T   +V ++G    G+LGH   S   G
Sbjct: 225 NVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTG 284

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+L++ + G   +I    +   A +   G+V  FG         +E +H  
Sbjct: 285 ---------PQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFG---------REPSHTS 326

Query: 280 RPS 282
            P+
Sbjct: 327 NPT 329


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 181/370 (48%), Gaps = 47/370 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++++ACG  H   +T+ G V++ G+++ G+LG   ++  S +P  I  L    V+ I+ G
Sbjct: 205 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 263

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
             H+ A+++ GELY WG+ ++  LGL G +  +    P K+   L GI   + A G   +
Sbjct: 264 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 322

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             ++  G++ ++G G  G LGHG   ++           P+ ++ L+GV+ K  A G  H
Sbjct: 323 AIISSAGQLFAYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 373

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           +A I E          +G+++ +GD    K+   +      P+ +  L   +  +V C  
Sbjct: 374 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 433

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             T VLT  G ++T GS E+G LG   +    S   ++GP     V +I       S G 
Sbjct: 434 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREI-------SSGS 485

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H A ++  GK+ TWG G            + GQLG G+ VD  +PT+V   E+ +   +
Sbjct: 486 SHIAVLTMNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSI 533

Query: 417 SCGFNHTGAL 426
           +CGFN T A+
Sbjct: 534 ACGFNFTMAI 543



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 51/327 (15%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+ L K+  + S G H +   T   ++++WG+     L  G  +   + +P  +     I
Sbjct: 146 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 203

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +  A G + +  VT  G+V SWG    GRLGH           S S   P++I+ L  
Sbjct: 204 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 254

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            +VK  A G  H+  +  +G +Y +G+      L+  G+  +R        +        
Sbjct: 255 TRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLW--GDQYQRSQWFPHKLFGPLDGISI 312

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            ++ CG +HT +++S G+L+ +G    G LG G    +  P++V+               
Sbjct: 313 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKG--------VRA 364

Query: 351 VLVSCGWKHTAAISE-----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             ++CG  HTAAI E           GK+ TW            G +  G+LGH +    
Sbjct: 365 KAIACGPWHTAAIVERMGTVKSNAPSGKLFTW------------GDADRGKLGHADKKMK 412

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
           + PT V    +    QVSC    T  L
Sbjct: 413 LVPTCVEPLNDFDFAQVSCAKAQTIVL 439



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG    + +  P             ++C  A T+ LT TG V+  G  + G+
Sbjct: 396 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455

Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG  +SE+    L    I G LK E V +IS+G  H + +T++G+++ WGK + GQLGLG
Sbjct: 456 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 511

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
               +    PT VE L        A GF  ++A+
Sbjct: 512 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 543



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 35/280 (12%)

Query: 159 KKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           K + + I +  K+  + ++ +  ++++ G   +   T    +  WG      L HG  S 
Sbjct: 129 KHSCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSK 188

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
               L       PRL+     + V+  A G  H+A + + G V+ +G     ++  +   
Sbjct: 189 ANVSL-------PRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSV 241

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS---P 331
               P +I  L  +  + +  G  HTC ++  GELY WG   + CLG+       S   P
Sbjct: 242 SVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTH-CLGLWGDQYQRSQWFP 300

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
            ++ GP      D I  SI+ ++CG  HTA IS  G++  +G     GTF        G 
Sbjct: 301 HKLFGPL-----DGI--SILKIACGHWHTAIISSAGQLFAYG----DGTF--------GV 341

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHG+ +    P  V   + V+A  ++CG  HT A++E +
Sbjct: 342 LGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 381



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 141/344 (40%), Gaps = 50/344 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG     S   P +  +     +KA+A G  HT  ++ +G +Y    G +  
Sbjct: 227 WGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCL 286

Query: 101 G----QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G    Q   S+   + L  PL   G+   +++I+ G+ H++ I+  G+L+ +G  + G L
Sbjct: 287 GLWGDQYQRSQWFPHKLFGPL--DGI--SILKIACGHWHTAIISSAGQLFAYGDGTFGVL 342

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGG 205
           G G      +  P +VE L G+  K  A G   + A+             GK+ +WG   
Sbjct: 343 GHGDTL--TVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDAD 400

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH  +   L          P  ++ L        +     +  +   G V+  G +
Sbjct: 401 RGKLGHADKKMKL---------VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSK 451

Query: 266 AVDKMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
              ++    GN     + I       K  +  E+  G  H  VLT  G+++TWG    G 
Sbjct: 452 EHGRL----GNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 507

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           LG+G        +R      E+  D+   SI   +CG+  T AI
Sbjct: 508 LGLGDY-----VDRSYPTLVEALEDKQVHSI---ACGFNFTMAI 543


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 159/345 (46%), Gaps = 41/345 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E   RP +  +    ++  +ACG  HT  +T TG +Y+   G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P R+SG  +  +V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
               K +  P +VE LSG+ T   A G   + A+                GK+ +WG G 
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             RLGHG + + L          P  +  L        A G   +  +  +G+V   G+ 
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
           AV   L    +  R P L+      E+V+   CG YH  VLT   E++TWG   NG LG 
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGH 387

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
           G I+    P  V     E   D+   ++  ++CG   TAAI + K
Sbjct: 388 GDIEDRKVPTLV-----EVLKDR---AVRYIACGANFTAAICQYK 424



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 166/376 (44%), Gaps = 60/376 (15%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   + + G V+  G +  G+LG    E+    + P  +  L    V  ++ G  H
Sbjct: 84  CGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDC---VRPRLVESLTVSNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G      IP   +V   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIP--KRVSGALEGLQVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG        L+S S   PR ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGD-------LKSVS--YPREVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVV 294
            I E              G+++ +GD   DK     G+   R  P+ ++ L   +   V 
Sbjct: 250 AIVEVIVTRSSSSVKLSAGKLFTWGDG--DKHRLGHGDKETRLKPTCVATLIDHDFYRVA 307

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CG   T  LT+ G++ + G+   G LG       HS  R+     +  V +    ++ ++
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNP-----HSDGRIPCLVEDKIVGE---QVIQIA 359

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  H A ++   ++ TWG G +            G+LGHG+  D   PT+V   ++   
Sbjct: 360 CGSYHVAVLTGRNEVFTWGKGAN------------GRLGHGDIEDRKVPTLVEVLKDRAV 407

Query: 414 LQVSCGFNHTGALLEY 429
             ++CG N T A+ +Y
Sbjct: 408 RYIACGANFTAAICQY 423



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 26/191 (13%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G  H+A + +NG V+ +G+ +  ++         RP L+  L  S  + V CG +HTC +
Sbjct: 85  GVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAV 144

Query: 304 TSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
           T+ GELY+WG  ++  G LG G+ DV H  P+RV G             +  VSCG  HT
Sbjct: 145 TTTGELYSWGDGTHNVGLLGHGN-DVGHWIPKRVSGALEG-------LQVAYVSCGTWHT 196

Query: 361 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           A I S G++ T+G G            S G LGHG+     +P  V     +K + V+CG
Sbjct: 197 ALITSMGQLFTFGDG------------SFGVLGHGDLKSVSYPREVESLSGLKTIAVACG 244

Query: 420 FNHTGALLEYV 430
             HT A++E +
Sbjct: 245 VWHTAAIVEVI 255


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 174/380 (45%), Gaps = 49/380 (12%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
           WR  +     ++ LK    G + T    F+     +YA G N+FGQLGI  +I  YS + 
Sbjct: 2   WRRAI-----QNCLKIAFIGSSITFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           + I    + V+ ++     S+AI   G+LY WG++  G LG G+   + I IPT VECL 
Sbjct: 57  VPI----QNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINIPTLVECLK 110

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
            +  K  A G     A+T  G++ +WG    G+LGH  ++      R   EY   L    
Sbjct: 111 HLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAK 170

Query: 232 IKELEGVKVKI--AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKL 287
           + EL  +  K+   + G   +  + ++G VY  G      +L  E  +A   S   IS L
Sbjct: 171 LPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNK-KGILGYETKNAEELSFKQISNL 229

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
               ++  G   +  L S G ++ WGSN  G LG  S  V+ +P++++G           
Sbjct: 230 KNIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKG----------L 279

Query: 348 TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
             I   SCG +   A+S +G + TWG+GG             GQLG  +  D   P  ++
Sbjct: 280 PKIKQFSCGEQFIGALSADGVLYTWGFGGD------------GQLGTPSKQDIPTPHKIS 327

Query: 407 FGENVKALQVSCGFNHTGAL 426
           F  N+   +VSCG  H G +
Sbjct: 328 FDHNID--KVSCGQAHVGII 345



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 181/407 (44%), Gaps = 63/407 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+LG+G+  S++ P +       ++  +AC  + +  + ++G +Y  G + FG 
Sbjct: 35  WGWNNFGQLGIGNSISQYSPQLVPI---QNVLFVACKSSVSAAIDKSGKLYTWGRSKFGL 91

Query: 103 LGIS--ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    ENI     P  +  LK  +   ++ G +H +AIT DG+LY WG   +G+LG   
Sbjct: 92  LGNGQVENINI---PTLVECLKHLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSF 148

Query: 160 KAAKVIPIPTKVECLSGIFTK-------------QAALGFEQSVAVTGGGKVLSWGAGGS 206
                +P   K E    + +              Q +LG + ++ ++  G V S G    
Sbjct: 149 DNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKK 208

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LG+          ++  E + + I  L+ + ++I  +G   S  +D +G ++ +G   
Sbjct: 209 GILGYE--------TKNAEELSFKQISNLKNI-IQI-DSGTDFSVALDSDGNMFAWGSNY 258

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             ++     +  + P  I  LP  ++  CG      L++ G LYTWG   +G LG  S  
Sbjct: 259 FGQLGTPSPSVIQTPQQIKGLPKIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQ 318

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 386
            + +P ++              +I  VSCG  H   IS  K+   G G            
Sbjct: 319 DIPTPHKI----------SFDHNIDKVSCGQAHVGIISNNKLYMHGRGKE---------- 358

Query: 387 SGGQLGHGNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALLE 428
             GQLG G++ +  +     P +V   ENV  L+++CG +H+ A++ 
Sbjct: 359 --GQLGRGSETESPNSSRYSPLLV--LENV--LKIACGGSHSFAIVN 399



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 152/360 (42%), Gaps = 44/360 (12%)

Query: 27  CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           CK  +S+ + +      WG   +G LG G +E+   P +    +    K +ACG  H   
Sbjct: 67  CKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAA 126

Query: 86  LTETGCVYATGLNDFGQLGIS----------------ENIGYSLEPLRISGLKKEVVQIS 129
           +T  G +Y  G  D G+LG S                +N+G +  P  +  L  +V Q+S
Sbjct: 127 ITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLP-ELVKLNFKVHQVS 185

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G   +  ++ DG +Y  G N  G LG   K A+ +    ++  L  I   Q   G + S
Sbjct: 186 LGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSF-KQISNLKNII--QIDSGTDFS 242

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA+   G + +WG+   G+LG    S I          TP+ IK L   K+K  + G   
Sbjct: 243 VALDSDGNMFAWGSNYFGQLGTPSPSVI---------QTPQQIKGLP--KIKQFSCGEQF 291

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
              +  +G +Y +G     ++          P  IS     ++V CG  H  ++ S  +L
Sbjct: 292 IGALSADGVLYTWGFGGDGQLGTPSKQDIPTPHKISFDHNIDKVSCGQAHVGII-SNNKL 350

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSE--SPVDQICTSIVLVSCGWKHTAAISEGK 367
           Y  G  + G LG GS          + P S   SP+  +  +++ ++CG  H+ AI   K
Sbjct: 351 YMHGRGKEGQLGRGS--------ETESPNSSRYSPL-LVLENVLKIACGGSHSFAIVNQK 401


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 20/303 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
           WG+ + G+LG+G+   +  P   S      +KA++ G G H++ LTE G V+  G ND G
Sbjct: 108 WGSNENGQLGIGTTADKNVPTPVSGLS--GIKAISGGLGYHSMALTENGTVWTWGKNDNG 165

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG    +  +  P+ + GL  +V  I+ G ++S A+  DG ++ WG N NG+LG G   
Sbjct: 166 ELGNGTTVQQN-SPVLVIGLS-DVTAIAAGGYYSLALKSDGTIWAWGANGNGELGDGTIV 223

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K  P+  +V  LS +    A  G   S+A+   G V +WG    G LG G         
Sbjct: 224 DKHTPV--QVSGLSDVIAITA--GGSHSLAIKQDGTVWAWGINMYGTLGDGTR------- 272

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  ++ L+   +K  A G  HS  +D+ G V+ +GD +  ++     +    P
Sbjct: 273 --TNRTIPVKVRNLQ--HIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTP 328

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             ++ + +  ++  GG+H+  L   G ++ WG N +G +G G+ +  ++P   +     +
Sbjct: 329 EQLTGIEHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRNDRNAPALTKAVLDTT 388

Query: 342 PVD 344
             D
Sbjct: 389 APD 391



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 173/368 (47%), Gaps = 47/368 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD G++G  +  +R  PV       + +  +  G   T+ L   G V+  G N+ G
Sbjct: 57  VWGQGDRGQIGDAAWNARNTPVQARGL--NDVMDIHTGVRSTMALRSDGTVWTWGSNENG 114

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLGI      ++ P  +SGL   +  IS G  +HS A+T +G ++ WGKN NG+LG G  
Sbjct: 115 QLGIGTTADKNV-PTPVSGLSG-IKAISGGLGYHSMALTENGTVWTWGKNDNGELGNGTT 172

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P+   V  LS + T  AA G+  S+A+   G + +WGA G+G LG G        
Sbjct: 173 VQQNSPV--LVIGLSDV-TAIAAGGY-YSLALKSDGTIWAWGANGNGELGDGT------- 221

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                ++TP  +  L  V + I A G  HS  I ++G V+ +G      +   +G    R
Sbjct: 222 --IVDKHTPVQVSGLSDV-IAITAGGS-HSLAIKQDGTVWAWGINMYGTL--GDGTRTNR 275

Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +  L + + +  GG+H+  L   G ++ WG N  G LG+G      +PE++ G  
Sbjct: 276 TIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTPEQLTG-- 333

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                      ++ ++ G  H+AA+  +G++  WGW          G +S GQ+G G   
Sbjct: 334 --------IEHVLDIAGGGFHSAALKKDGRV--WGW----------GLNSSGQIGDGTRN 373

Query: 398 DYIHPTIV 405
           D   P + 
Sbjct: 374 DRNAPALT 381



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 39/301 (12%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALG 185
           ++  GY+H++++   G++Y+WG+   GQ+G     A+  P+  + +  +  I T     G
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIHT-----G 92

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              ++A+   G V +WG+  +G+LG G          +  +  P  +  L G+K      
Sbjct: 93  VRSTMALRSDGTVWTWGSNENGQLGIGT---------TADKNVPTPVSGLSGIKAISGGL 143

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G+ HS  + ENG V+ +G     ++          P L+  L     +  GGY++  L S
Sbjct: 144 GY-HSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDVTAIAAGGYYSLALKS 202

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G ++ WG+N NG LG G+I   H+P +V G           + ++ ++ G  H+ AI +
Sbjct: 203 DGTIWAWGANGNGELGDGTIVDKHTPVQVSG----------LSDVIAITAGGSHSLAIKQ 252

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
              + W W          G +  G LG G   +   P  V   +++KA  ++ G +H+ A
Sbjct: 253 DGTV-WAW----------GINMYGTLGDGTRTNRTIPVKVRNLQHIKA--IAGGGHHSLA 299

Query: 426 L 426
           L
Sbjct: 300 L 300



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 24/138 (17%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           ++V G YHT  L S G++Y WG  + G +G  + +  ++P + +G             ++
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARG----------LNDVM 87

Query: 352 LVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
            +  G + T A+ S+G + TW            G +  GQLG G   D   PT V+    
Sbjct: 88  DIHTGVRSTMALRSDGTVWTW------------GSNENGQLGIGTTADKNVPTPVSGLSG 135

Query: 411 VKALQVSCGFNHTGALLE 428
           +KA+    G+ H+ AL E
Sbjct: 136 IKAISGGLGY-HSMALTE 152


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 168/358 (46%), Gaps = 44/358 (12%)

Query: 92  VYATGLNDFG---QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
           V+A G+ D G   ++G        + P+ + GL    V Q+  G  H++ +T  GE++ W
Sbjct: 236 VFAMGVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTW 295

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+   G+LG G +    +  P ++E L GI   Q A GF  + AVT  G++ +WGAG +G
Sbjct: 296 GRGGFGRLGHGNREG--LESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENG 353

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLG G  +           +TP  ++ L   KVK   AG +HS  +   G VY FG    
Sbjct: 354 RLGLGDVA---------DRHTPSRVEGLHS-KVKEVYAGSVHSCVLTREGTVYAFGKHEY 403

Query: 268 DKMLFQEGNHAR--RPSLIS-------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
                  G+H     P LI         L     V  GGYHT  LT  G++Y WG N   
Sbjct: 404 TG----HGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVA 459

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTS-----IVLVSCGWKHTAAIS-EGKILTWG 372
            LGIG  +    P  ++G +   P  Q+  S     IV V  GW H+AA++ +G++   G
Sbjct: 460 QLGIG--NSFTVPRNMEGAYF-LPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCG 516

Query: 373 --WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             + G  G  S  G     + GH    D+    +++  +++K  Q++CG  H+ A+ E
Sbjct: 517 RNYQGQLGLGSPQGFPQ-NERGHPFQADFC---LIDRLQHLKIKQIACGGEHSVAVAE 570



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 23/339 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +GRLG G+ E    P    A E      +ACG A+T  +T +G +Y  G  + G+
Sbjct: 295 WGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGR 354

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+  ++     P R+ GL  +V ++  G  HS  +T +G +Y +GK+     G  +   
Sbjct: 355 LGLG-DVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVL 413

Query: 163 KVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               IPT     SG   +Q ++G     ++A+T  G+V +WG     +LG G   ++   
Sbjct: 414 DPRLIPT-FSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRN 472

Query: 221 LRSTSEY-TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF------- 272
           +       +P+L++ L G+ +    AG+ HSA +  +G++Y+ G     ++         
Sbjct: 473 MEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFP 532

Query: 273 -QEGNHARRPS--LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
             E  H  +    LI +L +   +++ CGG H+  +   GE++++G+ + G LG  S   
Sbjct: 533 QNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTR 592

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
              P  VQ       +      I+ V+CG   T  ++ G
Sbjct: 593 EDFPRLVQA------LKSTRREIMHVACGNNCTLVLAGG 625


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYATG N+ G
Sbjct: 58  MFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 117

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +   +     + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL  K
Sbjct: 118 QLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--K 175

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +P +V    G      + G+  S  VT  G++  +G   +G+LG   +  +LG 
Sbjct: 176 NVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ--LLGN 231

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
            R     TP+L+ E+    +++A  G  H+  + EN  VY      FG   +   LF+  
Sbjct: 232 HR-----TPQLVSEIPEKVIQVACGG-EHTVVLTENA-VYTFGLGQFGQLGLGTFLFE-- 282

Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                P +I  +       + CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 283 --TSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 44/311 (14%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQICTSIVLVSCGWK 358
             +T+ GELY +G  ENG LG+        P ++ G    +P  V +I   ++ V+CG +
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--------PNQLLGNHR-TPQLVSEIPEKVIQVACGGE 253

Query: 359 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVS 417
           HT  ++E  + T+G G              GQLG G  + +   P ++    +     +S
Sbjct: 254 HTVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 418 CGFNHTGALLE 428
           CG NHT  + +
Sbjct: 302 CGENHTALITD 312



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 48/355 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +YT+G  + G LG+G+     S  +V     E+  DQ   +I  +SCG  HTA I++ 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQ---TISYISCGENHTALITDI 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 314 GLMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 185/397 (46%), Gaps = 50/397 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            +WG+   G+LG         PV+          A+A GG  TLF LT  G VYA+GL   
Sbjct: 3774 VWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVA-GGEQTLFILTSEGKVYASGLGGS 3832

Query: 101  GQLGI--SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI  S+NI     +EPL+   LK E + + +G  H+  +T + E++ WG   +G+LG
Sbjct: 3833 GRLGIGRSDNIVTPVIIEPLQ--HLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G K +     P K+E L G      + G   S A+T  G++ +WG G  GRLGHG    
Sbjct: 3891 HGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDD 3948

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             L          P+L++ L+  KV   A  +G   +  I ++  V+ +GD    K+    
Sbjct: 3949 CL---------KPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGG 3999

Query: 275  GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  ++P  I  L      +V CG   +  LT  G+LYTWG  +   LG G+ D +  P 
Sbjct: 4000 SDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPR 4059

Query: 333  RV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
            +V   QG             IV V+ G  H  A ++ G++ TW            G +  
Sbjct: 4060 KVACLQG-----------KQIVTVAAGSLHCVACTDAGEVFTW------------GDNDE 4096

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            GQLG+G       PT+V   ENVK  +V CG  H+ A
Sbjct: 4097 GQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFA 4133



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 190/400 (47%), Gaps = 54/400 (13%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTLFL-TETGCVYATG 96
            +WG  D G+LG G   S+    V S  E  ++ AL      GG+ T+F+ T  G VY +G
Sbjct: 2873 VWGLNDKGQLG-GCKGSK----VKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927

Query: 97   LNDFGQLGI--SENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
                G+LG+  +ENI     L+ L +  +KK  V +  G  HS  IT +G+++ WG+  +
Sbjct: 2928 EGANGRLGLGNTENISIPVQLDTLNMHFVKK--VTVHPGGRHSLCITREGKVFSWGEGID 2985

Query: 153  GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            G+LG G   +++ P  T +E L      + A G   S AVT  G++ +WG G  GRLGHG
Sbjct: 2986 GKLGHGDVTSRLSP--TLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHG 3043

Query: 213  QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKM 270
               ++         + P+ +K L+  KV   A G     +  + +N  V+ +GD    K+
Sbjct: 3044 DSKTL---------HIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKL 3094

Query: 271  LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                      P  I  L   +   + CG   +  L++ G+++TWG  +   LG G+    
Sbjct: 3095 GRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154

Query: 329  HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 387
             SP+ ++GP  +  + +I       + G  H  A+++ G++ +WG         ++ H  
Sbjct: 3155 RSPQLIEGPLKKKRITEI-------AVGALHCLAVTDTGEVYSWG---------DNDH-- 3196

Query: 388  GGQLGHGNDVDYIHPTIVNFGE--NVKALQVSCGFNHTGA 425
             GQ G+GN      P I   GE   VK   ++CG +H+ A
Sbjct: 3197 -GQQGNGNTTVNKRPQIC-LGELDGVKISHIACGSSHSIA 3234



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 44/324 (13%)

Query: 92   VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            V+  GLND GQLG      +    E   I+ L+   V I+ G      +T DG++Y+ G+
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRP--VSIAGGSKTVFIVTYDGKVYVSGE 2928

Query: 150  NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
             +NG+LGLG    + I IP +++ L+  F K+  +  G   S+ +T  GKV SWG G  G
Sbjct: 2929 GANGRLGLGN--TENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LGHG           TS  +P LI+ LE   +   A G  HSA +  +G +Y +G    
Sbjct: 2987 KLGHGD---------VTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDY 3037

Query: 268  DKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
             ++   +      P  +  L   +  ++ CG     T  LT    +++WG  + G LG G
Sbjct: 3038 GRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG 3097

Query: 324  SIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 381
              +  + P++         +D +C   +  ++CG + + A+S  GK+ TWG G  +    
Sbjct: 3098 GSEGCNIPQK---------IDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYY---- 3144

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIV 405
                    +LGHGND  Y  P ++
Sbjct: 3145 --------RLGHGNDSHYRSPQLI 3160



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 36/321 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           +K + C   + + LT  G VY+   N   +  +   +  SL  ++I  +   V     G 
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEAPV---LLDSLIDIKIKKIAANV----EGE 523

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           H+  A++ DG +Y WG    G+LG G    +    P  V+ L      Q A G   S AV
Sbjct: 524 HYL-ALSSDGCVYSWGSGDGGRLGHGDIRRE----PELVKELVNKKITQIACGSTYSAAV 578

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
           T  G++ +WG G  GRLGHG          S     P L+  L G  V   A  +G  H+
Sbjct: 579 TSNGELYTWGRGSYGRLGHGN---------SEDRLLPTLVAGLSGSHVVDVACGSGDAHT 629

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----YSEEVVCGGYHTCVLTSG 306
             ID++G V+ +GD    K+     +  + P ++  L     Y   V+CG   +  L   
Sbjct: 630 LAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKD 689

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G ++TWG ++   LG G++D +  P+ V+G  +   VD        ++ G  H  A+++ 
Sbjct: 690 GTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD--------IAVGPSHCLALTDN 741

Query: 367 -KILTWGWGGSHGTFSEDGHS 386
            +I TWG        S D ++
Sbjct: 742 CQIFTWGSDVQKYALSSDNYN 762



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 23/263 (8%)

Query: 62  PVVCSAFEKHSLKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           PV+  +     +K +A    G H L L+  GCVY+ G  D G+LG  +      EP  + 
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGD---IRREPELVK 558

Query: 120 GL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            L  K++ QI+ G  +S+A+T +GELY WG+ S G+LG G    ++  +PT V  LSG  
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRL--LPTLVAGLSGSH 616

Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
               A G     ++A+   G V SWG G  G+LG G          S     P++++ L+
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGG---------SDCCKVPKVVETLK 667

Query: 237 GVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEE 292
                I     G   S  + ++G V+ +G     ++     +H R P ++  L   +  +
Sbjct: 668 HHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD 727

Query: 293 VVCGGYHTCVLTSGGELYTWGSN 315
           +  G  H   LT   +++TWGS+
Sbjct: 728 IAVGPSHCLALTDNCQIFTWGSD 750



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 137/314 (43%), Gaps = 54/314 (17%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           + QI     +  A+T +G +Y    N+  +             P  ++ L  I  K+ A 
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCE------------APVLLDSLIDIKIKKIAA 518

Query: 185 GFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
             E    +A++  G V SWG+G  GRLGHG                P L+KEL   K+  
Sbjct: 519 NVEGEHYLALSSDGCVYSWGSGDGGRLGHGD-----------IRREPELVKELVNKKITQ 567

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG- 297
            A G  +SA +  NG +Y +G  +  ++    GN   R  P+L++ L  S   +V CG  
Sbjct: 568 IACGSTYSAAVTSNGELYTWGRGSYGRL--GHGNSEDRLLPTLVAGLSGSHVVDVACGSG 625

Query: 298 -YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             HT  +   G +++WG  + G LG G  D    P+ V+       +      IV V CG
Sbjct: 626 DAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVET------LKHHNKYIVNVLCG 679

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKAL 414
            + + A+  +G + TWG             S G +LGHG  +D++ +P +V    N   +
Sbjct: 680 SQFSVALGKDGTVWTWG------------KSDGYRLGHGT-LDHVRYPKMVEGLINYHIV 726

Query: 415 QVSCGFNHTGALLE 428
            ++ G +H  AL +
Sbjct: 727 DIAVGPSHCLALTD 740



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 72/155 (46%), Gaps = 4/155 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GD+G+LG G  E    P    A     +  +ACG   +L L+ TG V+  G  D+ +
Sbjct: 3086 WGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYR 3145

Query: 103  LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG   +  Y   P  I G   KK + +I+ G  H  A+T  GE+Y WG N +GQ G G  
Sbjct: 3146 LGHGNDSHYR-SPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNT 3204

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
                 P     E L G+     A G   S+A  G 
Sbjct: 3205 TVNKRPQICLGE-LDGVKISHIACGSSHSIAWCGN 3238



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 23/243 (9%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            + Y+WG N  GQLG G +  KV   P   + ++ +     A G +    +T  GKV + G
Sbjct: 3771 KFYVWGHNHRGQLG-GVQGTKV-KSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASG 3828

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVY 260
             GGSGRLG G+  +I+         TP +I+ L+ +K++  +  +G  H+  +  N  V+
Sbjct: 3829 LGGSGRLGIGRSDNIV---------TPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVF 3879

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
             +GD    K+   +   +  P  I  L   +   + CG  H+  +TS GELYTWG    G
Sbjct: 3880 SWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYG 3939

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG-GSH 377
             LG G  D    P+ ++   S   +D  C S      G   T AI++   + W WG G +
Sbjct: 3940 RLGHGDGDDCLKPKLLEALKSYKVIDVACGS------GDAQTLAITDDDCV-WSWGDGDY 3992

Query: 378  GTF 380
            G  
Sbjct: 3993 GKL 3995


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 178/376 (47%), Gaps = 58/376 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++ +   P  I  L    ++ ++
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPH---PKLIESLSNTNIELVA 370

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSSISCGP 428

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR I+ L+G++   AA G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGALGHGDRKSV---------SLPREIESLKGLRTVQAACG 479

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE- 291
             H+A + E            +G+++ +GD   DK     G+   +  P+ +  L     
Sbjct: 480 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKESKLVPTCVVTLVEPNC 537

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V CG   T  L+  G +YT GS   G LG    D    P RV+G  S+S V++I     
Sbjct: 538 QVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADG-KLPIRVEGKLSKSFVEEI----- 591

Query: 352 LVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
             +CG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++
Sbjct: 592 --ACGAYHVAVLTSRTEVFTWGKGAN------------GRLGHGDTNDRNTPTLVEALKD 637

Query: 411 VKALQVSCGFNHTGAL 426
            +   ++CG N T A+
Sbjct: 638 KQVKSIACGTNFTAAI 653



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  ++
Sbjct: 336 WGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 395

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 396 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG 454

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P ++E L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 455 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 512

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S L          P  +  L     ++A  G   +  +  +G VY  G   
Sbjct: 513 GRLGHGDKESKL---------VPTCVVTLVEPNCQVAC-GHSMTVALSRSGHVYTMGSCV 562

Query: 267 VDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL  S  EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 563 YGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGD 622

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            +  ++P  V     E+  D+   SI   +CG   TAAI
Sbjct: 623 TNDRNTPTLV-----EALKDKQVKSI---ACGTNFTAAI 653



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 34/271 (12%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 302 LPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP-------- 353

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI+ L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 354 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 412

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  ++      
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLR 472

Query: 342 PVDQIC-----TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            V   C      ++V V  G   ++  S GK+ TWG G              G+LGHG+ 
Sbjct: 473 TVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGDK 520

Query: 397 VDYIHPT-IVNFGENVKALQVSCGFNHTGAL 426
              + PT +V   E     QV+CG + T AL
Sbjct: 521 ESKLVPTCVVTLVE--PNCQVACGHSMTVAL 549



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 24/207 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++     +    P LI  L 
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+      P+RV GP     V 
Sbjct: 363 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 422

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
            I       SCG  HTA + S G++ T+G     GTF        G LGHG+      P 
Sbjct: 423 SI-------SCGPWHTAVVTSSGQLFTFG----DGTF--------GALGHGDRKSVSLPR 463

Query: 404 IVNFGENVKALQVSCGFNHTGALLEYV 430
            +   + ++ +Q +CG  HT A++E +
Sbjct: 464 EIESLKGLRTVQAACGVWHTAAVVEVM 490


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGL +  +  +P    A +   +   +CG  HTL  TE G +Y++G N  G
Sbjct: 60  VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  S + +     + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  +   P K++   G      + G+  S  VT  G++ ++G   +G+LG       L  
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
            +      P+ +  L G KVKI + G  H+  + E   VY FG     ++     +F+  
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              + P  +  L       V CG  HT V+T  G LYT+G   +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 39/332 (11%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          IS G  H+  +T +G+LY++G N+ GQLGL  
Sbjct: 19  FGKSKFAENI-----PSKFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +A   I  PT V+ L       A+ G   ++  T  GK+ S G    G+LG G  S    
Sbjct: 72  EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   T   IK+L        +AG   SA +  +G+++++GD +  ++  ++     
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGP 337
            P  I        + CG YH+  +T  GELYT+G  ENG LG+ S  +     P+RV G 
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG- 242

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                   +   + +VSCG +HT A++E ++ T+G G              GQLGHG  +
Sbjct: 243 --------LSGKVKIVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGTFI 282

Query: 398 DYIH-PTIVNFGENVKALQVSCGFNHTGALLE 428
                P  V+       L V+CG NHT  + +
Sbjct: 283 FETQLPKAVDVLTKKTILYVTCGENHTAVITD 314



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 35/312 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++CG  HT+ +T  G +Y  G N++GQLG+      S +P  +  LK E VV  S G +H
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
           +   T  G+LY  G NS GQLGLG  + +     T  + +S   T    KQ + G   S 
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G+LG  +E+            TP+ I    G  +   + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
           A + ++G +Y FG+    K+          ++P  +S L    ++V CGG HT  +T   
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCGWKHTAAISEG 366
           E+YT+G  + G LG G+          Q P +   VD +    +L V+CG  HTA I++ 
Sbjct: 264 EVYTFGLGQFGQLGHGTFIF-----ETQLPKA---VDVLTKKTILYVTCGENHTAVITDK 315

Query: 367 KILTWGWGGSHG 378
            +L     G HG
Sbjct: 316 GLLYTFGDGRHG 327



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 7/130 (5%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G  + G+LGL S  L+   +P   S      +K ++CGG HT+ +TE   VY  GL  F
Sbjct: 216 FGEPENGKLGLPSDKLKKHKKPQRVSGL-SGKVKIVSCGGEHTIAVTEKE-VYTFGLGQF 273

Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG    I  +  P  +  L KK ++ ++ G +H++ IT  G LY +G   +G+LGLG+
Sbjct: 274 GQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGE 333

Query: 160 K--AAKVIPI 167
           +    + +PI
Sbjct: 334 ENFTNQFVPI 343



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P++CS F K +++++ACGG H L       V+AT     
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373

Query: 101 GQLGISENI 109
            ++ I++ +
Sbjct: 374 SEMMINDEL 382


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 177/395 (44%), Gaps = 66/395 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV         +  L+ G  HT+ L   G V+A G N +GQ
Sbjct: 210 WGDNRYGQLGDGTTTQRAVPV--QVLNLSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQ 267

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG         +P+++ GL  +V+ +  G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 268 LGDGTTT-SRFQPVQV-GL-SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS 324

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+ +    LSG  T  A  G++ S+ +   G V SWG    G+LG G          
Sbjct: 325 SRVPVQSG---LSGGVTLVA--GYKHSLVLRSDGTVWSWGDNVFGQLGDG---------- 369

Query: 223 STSEYTPRLIKELEGVKVKI-------AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
               + PR       VKV          ++G LHS  +D NG V+ +GD    ++    G
Sbjct: 370 ---TFNPR----SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQL----G 418

Query: 276 NHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           N     SL++    L  S  V  G  HT VL +   ++ WG NE+G LG G++     P 
Sbjct: 419 NGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPV 478

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 391
           +V G           + +  VS G  H+ A+ S G +  WG       F+       GQL
Sbjct: 479 QVAG----------LSGVSAVSAGSYHSLALRSNGTVWAWG-------FNRY-----GQL 516

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G G + D + P  V     V A  V+ G +H+ AL
Sbjct: 517 GDGTNTDRLQPVQVAGLSGVVA--VAAGDSHSLAL 549



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 173/384 (45%), Gaps = 50/384 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +   PV         + +L  G +H L L   G V+A G N + Q
Sbjct: 110 WGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167

Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   N+G +    P+++ GL   +  ++ GY +S A+  DG ++ WG N  GQLG G  
Sbjct: 168 LG---NVGATRSNLPVQVPGLSGVIAVVAGGY-YSLALRSDGTVWAWGDNRYGQLGDGTT 223

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +P+  +V  LSG+    A  G   +VA+   G V +WG    G+LG G        
Sbjct: 224 TQRAVPV--QVLNLSGVMNLSA--GSFHTVALRSDGSVWAWGFNAYGQLGDGT------- 272

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +TS + P  +   +   V    AG  HS  +  +G V+ +GD    ++       +R 
Sbjct: 273 --TTSRFQPVQVGLSD---VLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRV 327

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P + S L     +V G  H+ VL S G +++WG N  G LG G+ +   S  +V      
Sbjct: 328 P-VQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVS----- 381

Query: 341 SPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                +      VS G  H+  + S G +  WG          D +S  GQLG+G  +D 
Sbjct: 382 ----WLSLGRADVSSGQLHSVVLDSNGAVWAWG----------DNYS--GQLGNGTGLDS 425

Query: 400 IHPTIVNFGENVKALQVSCGFNHT 423
           +    V  G +V    VS GF HT
Sbjct: 426 LVAAPVGLGGSVA---VSAGFKHT 446



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 31/305 (10%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S   LA G  H++ +   G V+A G N  GQLG    +  S  P+R++ L   VV ++
Sbjct: 35  RSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVD-SPTPVRVTNLSG-VVSVA 92

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           +G +HS  ++ DG ++ WG N+ GQLG G  +A   P+P +V+ LSG+ +  +  GF   
Sbjct: 93  SGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGS--GFSHG 148

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G V +WG             + LG + +T    P  +  L GV + + A G+ +
Sbjct: 149 LALRSDGTVWAWGD---------NRYNQLGNVGATRSNLPVQVPGLSGV-IAVVAGGY-Y 197

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGG 307
           S  +  +G V+ +GD    ++   +G   +R  P  +  L     +  G +HT  L S G
Sbjct: 198 SLALRSDGTVWAWGDNRYGQL--GDGTTTQRAVPVQVLNLSGVMNLSAGSFHTVALRSDG 255

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
            ++ WG N  G LG G+      P +V           +   + LV+  +   A  S+G 
Sbjct: 256 SVWAWGFNAYGQLGDGTTTSRFQPVQV----------GLSDVLTLVAGNYHSLAVRSDGA 305

Query: 368 ILTWG 372
           +  WG
Sbjct: 306 VWAWG 310



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 168/368 (45%), Gaps = 50/368 (13%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG G+ L+S    +V +        A++ G  HTL L     V+A G+N+ G
Sbjct: 409 WGDNYSGQLGNGTGLDS----LVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHG 464

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    +     P++++GL   V  +S G +HS A+  +G ++ WG N  GQLG G   
Sbjct: 465 QLG-DGTLTDRTRPVQVAGLSG-VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNT 522

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++ P+  +V  LSG+     A G   S+A+   G V +WG    G++G G  S      
Sbjct: 523 DRLQPV--QVAGLSGVVA--VAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSW----- 573

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--- 278
                + P  ++ +    V   +AG  HS  +  +G V+ +G     ++   +G+ A   
Sbjct: 574 ----RFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQL--GDGSTAINK 625

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  ++ L     +  G YH+  L S G ++ WG N +G LG GS+    +P RV G  
Sbjct: 626 PAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPVRVSG-- 683

Query: 339 SESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                    + +V V  G  H+ A  S+G +  WG+ G             GQLG G   
Sbjct: 684 --------LSGVVSVVAGDYHSLARRSDGTVWAWGYNGE------------GQLGDGTRN 723

Query: 398 DYIHPTIV 405
           D + P  V
Sbjct: 724 DTLVPVWV 731



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 163/367 (44%), Gaps = 45/367 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+   R    V  ++       ++ G  H++ L   G V+A G N  GQ
Sbjct: 358 WGDNVFGQLGDGTFNPR-SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQ 416

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +   +  P+ + G     V +S G+ H+  +  D  ++ WG N +GQLG G   
Sbjct: 417 LGNGTGLDSLVAAPVGLGG----SVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLT 472

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+  +V  LSG+    A  G   S+A+   G V +WG    G+LG G         
Sbjct: 473 DRTRPV--QVAGLSGVSAVSA--GSYHSLALRSNGTVWAWGFNRYGQLGDGTN------- 521

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             T    P  +  L GV     AAG  HS  +  +G V+ +G     ++   +G+++ R 
Sbjct: 522 --TDRLQPVQVAGLSGVVA--VAAGDSHSLALRSDGTVWAWGYNFDGQI--GDGSYSWRF 575

Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +  L     V  GGYH+  L S G ++TWG N +G LG GS   ++ P  VQ    
Sbjct: 576 LPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGST-AINKPAPVQ---- 630

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
              V  +   + L S  +      S+G +  WG       F+ D     GQLG G+ ++ 
Sbjct: 631 ---VAGLSGVVSLGSGNYHSLGLRSDGTVWAWG-------FNFD-----GQLGDGSLLNR 675

Query: 400 IHPTIVN 406
             P  V+
Sbjct: 676 STPVRVS 682



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 131/302 (43%), Gaps = 41/302 (13%)

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
           +G    PL   G +    +++ G +HS  +  DG ++ WG N  GQLG G       P P
Sbjct: 25  LGRVRSPL---GGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDS--PTP 79

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
            +V  LSG+ +   A G   S+ ++  G V +WG   +G+LG+G  S+            
Sbjct: 80  VRVTNLSGVVS--VASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASA---------SPV 128

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P  ++ L GV V + + GF H   +  +G V+ +GD   +++       +  P  +  L 
Sbjct: 129 PVRVQNLSGV-VSLGS-GFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPGLS 186

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
               VV GGY++  L S G ++ WG N  G LG G+      P +V             +
Sbjct: 187 GVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLN----------LS 236

Query: 349 SIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
            ++ +S G  HT A+ S+G +  W            G ++ GQLG G       P  V  
Sbjct: 237 GVMNLSAGSFHTVALRSDGSVWAW------------GFNAYGQLGDGTTTSRFQPVQVGL 284

Query: 408 GE 409
            +
Sbjct: 285 SD 286


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K +ACG  HTL  TE G VYATG N+ G
Sbjct: 58  MFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDG 117

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  +  P+     + ++ Q+S G + S+A+T +GEL+MWG NS GQ+GL  K
Sbjct: 118 QLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGL--K 175

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +P +V    G      + G+  S  VT  G++ ++G   +G+LG  +E  I   
Sbjct: 176 NVTNVCVPHQVTI--GKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLI--- 230

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
               +  TP+L+  +    +++A  G  H+  + E   VY      FG   +   +F+  
Sbjct: 231 ----NHKTPQLVTRIPEKVIQVACGGG-HTVVLTET-IVYTFGLGQFGQLGLGTFIFE-- 282

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                P  I  +   +   + CG  HT ++T  G +YT+G    G LG+G
Sbjct: 283 --TSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDGRYGKLGLG 330



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 152/331 (45%), Gaps = 37/331 (11%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          +S G  H++ +T + +LYM+G N+ GQLGLG 
Sbjct: 17  FGKTKFAENI-----PSKFWFKNDVPTYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    I  PT V+ L     K  A G   ++  T  G V + G    G+LG G       
Sbjct: 72  KT--TINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNT 129

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F    S +T +        K+K  +AG   SA + ENG ++++GD +  ++  +   +  
Sbjct: 130 FY-PISFFTSQH-------KIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVC 181

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPF 338
            P  ++       + CG YH+  +T  GELYT+G  ENG LG+   + + H   ++    
Sbjct: 182 VPHQVTIGKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQL---- 237

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 397
               V +I   ++ V+CG  HT  ++E  + T+G G              GQLG G  + 
Sbjct: 238 ----VTRIPEKVIQVACGGGHTVVLTETIVYTFGLG------------QFGQLGLGTFIF 281

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           +   P  + + ++ K   +SCG NHT  + E
Sbjct: 282 ETSEPKAIEYIKDHKISSISCGENHTALITE 312



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      + +P  +  LK E V+ ++ G +H
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTIN-KPTCVKALKPEKVKYVACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   T +G +Y  G N++GQLGLG    +    P      S    KQ + G   S A+T 
Sbjct: 99  TLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISF-FTSQHKIKQLSAGSNTSAALTE 157

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++  WG    G++G    +++           P  +    G  +   + G+ HSA + 
Sbjct: 158 NGELFMWGDNSEGQIGLKNVTNVC---------VPHQV--TIGKPISWISCGYYHSAFVT 206

Query: 255 ENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELY 310
            +G +Y FG+    K+   E    NH + P L++++P    +V CGG HT VLT    +Y
Sbjct: 207 MDGELYTFGECENGKLGLPEELLINH-KTPQLVTRIPEKVIQVACGGGHTVVLTETI-VY 264

Query: 311 TWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
           T+G  + G LG+G+ I     P+ +     E   D   +SI   SCG  HTA I+E G++
Sbjct: 265 TFGLGQFGQLGLGTFIFETSEPKAI-----EYIKDHKISSI---SCGENHTALITELGRM 316

Query: 369 LTWGWG 374
            T+G G
Sbjct: 317 YTFGDG 322



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 51/271 (18%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +PT + C           G E +  VTG  K+  +G+   G+LG G +++I         
Sbjct: 36  VPTYLSC-----------GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTI--------- 75

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGNHARRP-SL 283
             P  +K L+  KVK  A G  H+    E G VY  G     ++     EG +   P S 
Sbjct: 76  NKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISF 135

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            +     +++  G   +  LT  GEL+ WG N  G +G+ ++  +  P +V         
Sbjct: 136 FTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVT-------- 187

Query: 344 DQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
             I   I  +SCG+ H+A ++ +G++ T+G                G+LG   ++   H 
Sbjct: 188 --IGKPISWISCGYYHSAFVTMDGELYTFG------------ECENGKLGLPEELLINHK 233

Query: 403 T---IVNFGENVKALQVSCGFNHTGALLEYV 430
           T   +    E  K +QV+CG  HT  L E +
Sbjct: 234 TPQLVTRIPE--KVIQVACGGGHTVVLTETI 262


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGL +  +  +P    A +   +   +CG  HTL  TE G +Y++G N  G
Sbjct: 60  VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  S + +     + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  +   P K++   G      + G+  S  VT  G++ ++G   +G+LG       L  
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
            +      P+ +  L G KVKI + G  H+  + E   VY FG     ++     +F+  
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              + P  +  L       V CG  HT V+T  G LYT+G   +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 154/332 (46%), Gaps = 39/332 (11%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      +   IS G  H+  +T +G+LY++G N+ GQLGL  
Sbjct: 19  FGKSKFAENI-----PSKFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +A   I  PT V+ L       A+ G   ++  T  GK+ S G    G+LG G  S    
Sbjct: 72  EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   T   IK+L        +AG   SA +  +G+++++GD +  ++  ++     
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGP 337
            P  I        + CG YH+  +T  GELYT+G  ENG LG+ S  +     P+RV G 
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG- 242

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                   +   + +VSCG +HT A++E ++ T+G G              GQLGHG  +
Sbjct: 243 --------LSGKVKIVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGTFI 282

Query: 398 DYIH-PTIVNFGENVKALQVSCGFNHTGALLE 428
                P  V+       L V+CG NHT  + +
Sbjct: 283 FETQLPKAVDVLTKKTILYVTCGENHTAVITD 314



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 35/312 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++CG  HT+ +T  G +Y  G N++GQLG+      S +P  +  LK E VV  S G +H
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
           +   T  G+LY  G NS GQLGLG  + +     T  + +S   T    KQ + G   S 
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G+LG  +E+            TP+ I    G  +   + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
           A + ++G +Y FG+    K+          ++P  +S L    ++V CGG HT  +T   
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCGWKHTAAISEG 366
           E+YT+G  + G LG G+          Q P +   VD +    +L V+CG  HTA I++ 
Sbjct: 264 EVYTFGLGQFGQLGHGTFIF-----ETQLPKA---VDVLTKKTILYVTCGENHTAVITDK 315

Query: 367 KILTWGWGGSHG 378
            +L     G HG
Sbjct: 316 GLLYTFGDGRHG 327



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 7/130 (5%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G  + G+LGL S  L+   +P   S      +K ++CGG HT+ +TE   VY  GL  F
Sbjct: 216 FGEPENGKLGLPSDKLKKHKKPQRVSGL-SGKVKIVSCGGEHTIAVTEKE-VYTFGLGQF 273

Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG    I  +  P  +  L KK ++ ++ G +H++ IT  G LY +G   +G+LGLG+
Sbjct: 274 GQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGE 333

Query: 160 K--AAKVIPI 167
           +    + +PI
Sbjct: 334 ENFTNQFVPI 343



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P++CS F K +++++ACGG H L       V+AT     
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373

Query: 101 GQLGISENI 109
            ++ I++ +
Sbjct: 374 SEMMINDEL 382


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 178/378 (47%), Gaps = 60/378 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV---LHPKLIEALSNTNIELVA 368

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 369 CGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVP--KRVNGPLEGIHVSYISCGP 426

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 427 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAACG 477

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPY 289
             H+A + E            +G+++ +GD   DK     G+        R +L++  P 
Sbjct: 478 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTRVALVNVKPN 535

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
             +V CG   T  LT+ G +YT GS   G LGI   D    P  V+   SES V++I   
Sbjct: 536 FCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADG-KLPICVEWKLSESFVEEI--- 591

Query: 350 IVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
               +CG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   
Sbjct: 592 ----ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNTPTLVEAL 635

Query: 409 ENVKALQVSCGFNHTGAL 426
           ++     ++CG N T A+
Sbjct: 636 KDKDVKSIACGTNFTAAI 653



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 152/349 (43%), Gaps = 57/349 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  + 
Sbjct: 334 WGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNC 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 394 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 453 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDENGRVYIFGD 264
           GRLGHG + + L   R            L  VK         HS    +   G VY  G 
Sbjct: 511 GRLGHGDKEAKLVPTRVA----------LVNVKPNFCQVACGHSLTVALTTKGHVYTMGS 560

Query: 265 RAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGS 314
               ++          P    KLP          + EE+ CG YH  VLTS  E+YTWG 
Sbjct: 561 PVYGQLGI--------PQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGK 612

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             NG LG G  D  ++P  V     E+  D+   SI   +CG   TAAI
Sbjct: 613 GANGRLGHGDTDDRNTPTLV-----EALKDKDVKSI---ACGTNFTAAI 653



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 141/316 (44%), Gaps = 64/316 (20%)

Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           G++++WG+ +        N ++G  LG K   + P    +E    +  +  A G   +  
Sbjct: 267 GDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFP--KSLESAVVLDVQNIACGGRHAAL 324

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G++ SWG    GRLGHG +S +L          P+LI+ L    +++ A G  H+ 
Sbjct: 325 VTKQGEIFSWGEEAGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHTC 375

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
            +  +G +Y +G+   +  L   GN      P  ++   +  +   + CG +HT V+TS 
Sbjct: 376 AVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 435

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           G+L+T+G    G LG G    +  P  V+       +  + T  V  +CG  HTAA+ E 
Sbjct: 436 GQLFTFGDGTFGALGHGDRKSVSLPREVES------LKGLRT--VRAACGVWHTAAVVEV 487

Query: 366 ------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVNFGEN 410
                       GK+ TWG G              G+LGHG+    + PT   +VN   N
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGDKEAKLVPTRVALVNVKPN 535

Query: 411 VKALQVSCGFNHTGAL 426
               QV+CG + T AL
Sbjct: 536 F--CQVACGHSLTVAL 549



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 24/207 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ A  ++     +    P LI  L 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGC--LGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG+    C  LG G+      P+RV GP       
Sbjct: 361 NTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLE----- 415

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
                +  +SCG  HTA + S G++ T+G     GTF        G LGHG+      P 
Sbjct: 416 --GIHVSYISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGDRKSVSLPR 461

Query: 404 IVNFGENVKALQVSCGFNHTGALLEYV 430
            V   + ++ ++ +CG  HT A++E +
Sbjct: 462 EVESLKGLRTVRAACGVWHTAAVVEVM 488


>gi|293344078|ref|XP_001080802.2| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Rattus norvegicus]
 gi|293355949|ref|XP_344892.4| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Rattus norvegicus]
 gi|149055831|gb|EDM07262.1| similar to Gnefr protein (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 450

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 180/418 (43%), Gaps = 67/418 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E    P   S F K   +K++  GG H++ +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G    WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTDTGSTFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE   V  A AG  HSA + + G +Y++G           
Sbjct: 194 LPL--FLTAKE---PSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWG----------R 238

Query: 275 GNHARRPSLISKLPYSEEVVC-------------GGYHTCVLTSGGELYTWGSNENGCLG 321
             H +  SL + LP  + V               G  H    T  G+++TWG  + G LG
Sbjct: 239 NKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298

Query: 322 I----------GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTW 371
                      G  D   + +R+Q     SP+  + T    VSCG +H  A+   K  +W
Sbjct: 299 RTLGSPEAQKHGEQDSSLAFQRLQNSVP-SPLHCL-TGAAEVSCGSEHNLAVIRDKCCSW 356

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGALLE 428
           GW            +  G  G G + +   PT V       + L V CG  H+ AL +
Sbjct: 357 GW------------NEHGMCGDGTESNVWTPTPVQALPSPSRLLLVGCGAGHSLALCQ 402



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 143/298 (47%), Gaps = 41/298 (13%)

Query: 92  VYATGLNDFGQLGI--SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMW 147
           ++A G N +GQLG+   E++   L P ++S   K   +  ++ G  HS  +T  G L++ 
Sbjct: 17  LFAWGANSYGQLGLGHKEDV---LLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVC 73

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G
Sbjct: 74  GLNKDGQLGLG-HTEEVLRF-TICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG 131

Query: 208 RLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD- 264
           +LG  HG    ++          P+ I+ L   KV   AAG  H+    + G  + +G  
Sbjct: 132 QLGVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTDTGSTFQWGTG 180

Query: 265 -RAVDKMLFQEGN-----HARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSN 315
             +  + L    N      A+ PS ++ L  S  VVC   G  H+  LT  GELY WG N
Sbjct: 181 LASSGRRLCPGQNLPLFLTAKEPSRVTGL-ESSTVVCAVAGSDHSASLTDTGELYVWGRN 239

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
           ++G L       L  P+RV+  + +         +  V  GW H  A +E GK+ TWG
Sbjct: 240 KHGQLA-SLATFLPLPQRVEAHYFQD------EKVTAVWSGWTHLVAKTETGKVFTWG 290


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 12/256 (4%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    AFE   +  ++CG  H+L +   G V+A G    GQLGI E    S  P +I  
Sbjct: 87  KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146

Query: 121 LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L   +++Q+S GY+HS A++ DG+++ WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 147 LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTS-PQRVRSLEGIPL 205

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G    WG+  +G+L      ++ G       Y P  +  L+ + 
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQL------ALSGTKAPVQRYKPLSVGALKTLG 259

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGY 298
           V   + G  H+A + +NG VY FG  +  ++        R P  + ++     ++ CG Y
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQL--GHSAEQRGPQCVERIDGLVSQIDCGSY 317

Query: 299 HTCV-LTSGGELYTWG 313
           HT   + + G++ ++G
Sbjct: 318 HTLAYVYTTGQVVSFG 333



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 28/280 (10%)

Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           + E    S +P +I   +   V  +S G  HS A+   G ++ WG  S GQLG+G+   +
Sbjct: 78  LREESAPSSKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKER 137

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P K++ L+GI   Q + G+  S+A++  G+V SWG    G+LG G+E         
Sbjct: 138 SF-TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVP------- 189

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARR 280
            S+ +P+ ++ LEG+ +   AAG  HS  +  +G  + +G  +  ++     +      +
Sbjct: 190 -SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYK 248

Query: 281 PSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L       + CG  HT VLT  G +YT+G+N +G LG       HS E+ +GP 
Sbjct: 249 PLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLG-------HSAEQ-RGPQ 300

Query: 339 SESPVDQICTSIVLVSCGWKHTAA--ISEGKILTWGWGGS 376
               +D + + I    CG  HT A   + G+++++G G S
Sbjct: 301 CVERIDGLVSQI---DCGSYHTLAYVYTTGQVVSFGHGPS 337



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 30/237 (12%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAHTLFLTE 88
           R FA  WG G  G+LG+G  + R       +F    +KALA        CG  H+L L+E
Sbjct: 117 RVFA--WGAGSEGQLGIGEFKER-------SFTPQKIKALAGIKIIQVSCGYYHSLALSE 167

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
            G V++ G N  GQLG+ + +     P R+  L+   + Q++ G  HS A+++ G  + W
Sbjct: 168 DGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 227

Query: 148 GKNSNGQLGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           G NS GQL L G KA      P  V  L  +     + G E +  +T  G V ++GA  S
Sbjct: 228 GSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSS 287

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G+LGH  E           +  P+ ++ ++G+  +I    +   A +   G+V  FG
Sbjct: 288 GQLGHSAE-----------QRGPQCVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 333



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 13/183 (7%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            GEL+ WG+NS+GQLGLG+      P P  VE L+G+   Q + G   S+A++  G V SW
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSS-PTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW 971

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G    G+LG G          + S+ +P L++ L+  KV   A G  H+A + ++G V+ 
Sbjct: 972  GKNDFGQLGLGH---------TESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFT 1022

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG-GELYTWGSNENG 318
            FG     ++         RP L+++L      ++ CG +HT    S  G+++ +GS +NG
Sbjct: 1023 FGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNG 1082

Query: 319  CLG 321
             LG
Sbjct: 1083 QLG 1085



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 36/264 (13%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P +++    +     + G E S+AV   G+V +WGAG  G+LG G+        RS   +
Sbjct: 88  PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKE-----RS---F 139

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK 286
           TP+ IK L G+K+   + G+ HS  + E+G+V+ +G  +  ++ L +E      P  +  
Sbjct: 140 TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS 199

Query: 287 L---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
           L   P ++ V  GG H+  L+  G  + WGSN  G L +       +P +   P S   +
Sbjct: 200 LEGIPLAQ-VAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTK---APVQRYKPLSVGAL 255

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
             +   +V +SCG +HTA +++         G+  TF   G +S GQLGH    +   P 
Sbjct: 256 KTL--GVVYISCGSEHTAVLTQ--------NGAVYTF---GANSSGQLGHS--AEQRGPQ 300

Query: 404 IVNFGENVKAL--QVSCGFNHTGA 425
            V   E +  L  Q+ CG  HT A
Sbjct: 301 CV---ERIDGLVSQIDCGSYHTLA 321



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 13/176 (7%)

Query: 90   GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
            G ++A G N  GQLG+      S  P  +  L    +VQIS G  HS A+++ G +Y WG
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            KN  GQLGLG   +K    P+ +  L        A G   +  +T  G V ++GAG  G+
Sbjct: 973  KNDFGQLGLGHTESK--DSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
            LGH           +  E  P L+ EL G +V   A G  H+ A + E G+V+ FG
Sbjct: 1031 LGHSS---------TRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFG 1077



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  D+G+LGLG  ES+  P +  A +   +  LACGG+HT  LT+ G V+  G   +GQ
Sbjct: 971  WGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
            LG S      L P  ++ L    V QI+ G  H+ A   + G+++ +G   NGQLG
Sbjct: 1031 LGHSSTRD-ELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 43   WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG   +G+LGLG +  S   P +        L  ++ G AH++ L+ TG VY+ G NDFG
Sbjct: 918  WGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFG 977

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QLG+          L  +   ++V  ++ G  H++ +T DG ++ +G    GQLG     
Sbjct: 978  QLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTR 1037

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG----HGQESS 216
             ++   P  V  L G    Q A G   ++A V+  GKV ++G+G +G+LG    H Q +S
Sbjct: 1038 DEL--RPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTHNQPNS 1095

Query: 217  ILGFLR 222
             +   R
Sbjct: 1096 YVNLRR 1101



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 30/209 (14%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLIS 285
           P  I+  E ++V + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I 
Sbjct: 88  PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFT--PQKIK 145

Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESP 342
            L   +  +V CG YH+  L+  G++++WG N +G LG+G  +    SP+RV+      P
Sbjct: 146 ALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS-LEGIP 204

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDY 399
           + Q       V+ G  H+ A+S     ++GWG           +S GQL   G    V  
Sbjct: 205 LAQ-------VAAGGAHSFALSLSGT-SFGWGS----------NSAGQLALSGTKAPVQR 246

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
             P  V   + +  + +SCG  HT  L +
Sbjct: 247 YKPLSVGALKTLGVVYISCGSEHTAVLTQ 275



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 21/135 (15%)

Query: 292  EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
            ++  G  H+  L+  G +Y+WG N+ G LG+G  +   SP  ++   S+         + 
Sbjct: 951  QISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQ--------KVD 1002

Query: 352  LVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
             ++CG  HTA ++ +G + T+G G              GQLGH +  D + P +V     
Sbjct: 1003 FLACGGSHTALLTQDGLVFTFGAGKY------------GQLGHSSTRDELRPCLVTELLG 1050

Query: 411  VKALQVSCGFNHTGA 425
             +  Q++CG  HT A
Sbjct: 1051 NRVTQIACGRWHTLA 1065



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 30/128 (23%)

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-----TSIVLVSCGWKHTA 361
            GEL+ WG N +G LG+G I            F  SP  QI        +V +S G  H+ 
Sbjct: 913  GELFAWGQNSHGQLGLGRI------------FPSSPTPQIVEHLAGVPLVQISAGEAHSM 960

Query: 362  AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
            A+S  G + +W            G +  GQLG G+      P+++   ++ K   ++CG 
Sbjct: 961  ALSMTGNVYSW------------GKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGG 1008

Query: 421  NHTGALLE 428
            +HT  L +
Sbjct: 1009 SHTALLTQ 1016


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 163/344 (47%), Gaps = 37/344 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  S ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 310 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 369

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG  +  +V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 370 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 428

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
            +  + I  P +VE L G+ T   + G   + AV         T  GK+ +WG G   RL
Sbjct: 429 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 486

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  +  L       A  G   +  +  +G ++  G  +V  
Sbjct: 487 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 536

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EVVCG YH  VLT  GE+YTWG   NG LG G I 
Sbjct: 537 QLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIA 596

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
              +P      F E+  D+   S+  ++CG   TAAI + K ++
Sbjct: 597 DRKTPT-----FVEALRDR---SVKRIACGSGFTAAICQHKSVS 632



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 60/316 (18%)

Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG        +  +        AA  I +P  +E    +     A G + +  VT
Sbjct: 243 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 302

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG  +SI         + PRL++ L    V+  A G  H+  I
Sbjct: 303 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 353

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S  P        V CG +HT ++TS G
Sbjct: 354 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 412

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-- 365
           +LYT+G    G LG G+ + +  P+ V+       +  + T  + VSCG  HTAA+ E  
Sbjct: 413 KLYTFGDGTFGVLGHGNRETISYPKEVES------LKGLRT--ISVSCGVWHTAAVVEVI 464

Query: 366 --------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV------NFGENV 411
                   GK+ TWG G  +            +LGHG+    + PT V      NF + V
Sbjct: 465 MAQSNTSSGKLFTWGDGDKY------------RLGHGDRSSKLKPTCVPSLIDYNFHKAV 512

Query: 412 KALQVSCGFNHTGALL 427
               ++ G   +G + 
Sbjct: 513 CGHTLTIGLTTSGHIF 528



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 26/226 (11%)

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G +S+      +T    P+ ++    + V   A G  H+A +     V+ +G+    ++
Sbjct: 259 QGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 318

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G    +P L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +
Sbjct: 319 GHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGS-N 377

Query: 327 VLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 384
           V H  P+RV GP            +  VSCG  HTA I S GK+ T+G     GTF    
Sbjct: 378 VSHWIPKRVSGPLE-------GLQVSAVSCGTWHTALITSSGKLYTFG----DGTF---- 422

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
               G LGHGN     +P  V   + ++ + VSCG  HT A++E +
Sbjct: 423 ----GVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVI 464



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 168/376 (44%), Gaps = 60/376 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
           +ACG  H   +T    V+  G    G+LG     G S+ +P  +  L    V  I+ G  
Sbjct: 291 VACGVKHAALVTRQAEVFTWGEECSGRLG--HGAGTSIFQPRLVESLSICNVETIACGEF 348

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ AIT  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   + 
Sbjct: 349 HTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLEGLQVSAVSCGTWHTA 406

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  GK+ ++G G  G LGHG         R T  Y P+ ++ L+G++    + G  H+
Sbjct: 407 LITSSGKLYTFGDGTFGVLGHGN--------RETISY-PKEVESLKGLRTISVSCGVWHT 457

Query: 251 ACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEVV 294
           A + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  + V
Sbjct: 458 AAVVEVIMAQSNTSSGKLFTWGD--GDKYRLGHGDRSSKLKPTCVPSLID---YNFHKAV 512

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CG   T  LT+ G ++T GS+  G LG  + D  + P  V+       V ++        
Sbjct: 513 CGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRY-PRLVEEKLGGGGVVEVVCGAY--- 568

Query: 355 CGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
               H A +++ G++ TWG G +            G+LGHG+  D   PT V    +   
Sbjct: 569 ----HVAVLTQSGEVYTWGKGAN------------GRLGHGDIADRKTPTFVEALRDRSV 612

Query: 414 LQVSCGFNHTGALLEY 429
            +++CG   T A+ ++
Sbjct: 613 KRIACGSGFTAAICQH 628


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 172/367 (46%), Gaps = 38/367 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LGLGS E+             S+ ++A G  HT++LT T  VY+ G N+FGQ
Sbjct: 4   WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  ++      P  ++G   +E+  ++ G   S AI   G L+ WG++ NG+L   + +
Sbjct: 63  LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                +  K+   S +   Q A G +  +A+T  G +LSWG+   G+LG G  SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-QEGNHARR 280
                  P +I  L    +    AG  HS  +  +G ++ +G     ++      +    
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 281 PSLISKLPYSEEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P L+  L + E V    G  H+   T  G +++WG   NG LG  S+  +  P+++    
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKI---- 284

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
               ++ + T++  + CG +HT ++++ + L  G+          G +S  QLG  ND  
Sbjct: 285 ----MELMGTTVCQICCGRRHTISLTDKRKLL-GF----------GLNSNNQLGTHNDTS 329

Query: 399 YIHPTIV 405
              P  +
Sbjct: 330 ARLPITI 336



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 147/343 (42%), Gaps = 42/343 (12%)

Query: 92  VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +Y  G ND+GQLG+ SEN+  S  P  I    + V+ I++G  H+  +T   ++Y  G N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQLG  K   +    P+ V           A G   S+A+   G +  WG   +G L 
Sbjct: 59  EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             Q+S           + P+L+ ++    V   A G  H   + E G +  +G     ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164

Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L         P++I+ L   P S+ +  G YH+ VL+  G L+TWG N  G LG G+ D
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 385
              S  R+        V       V V+ G +H+   +  G + +WG GG+         
Sbjct: 224 SFQSSPRLVKTLRHQEV-------VFVAMGEEHSVCRTRNGGVFSWGHGGN--------- 267

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              GQLGH +  +   P  +         Q+ CG  HT +L +
Sbjct: 268 ---GQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTD 307



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)

Query: 43  WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  ++G+LG G+ +S +  P +        +  +A G  H++  T  G V++ G    G
Sbjct: 209 WGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNG 268

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++    +P +I  L    V QI  G  H+ ++T   +L  +G NSN QLG    
Sbjct: 269 QLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHND 327

Query: 161 AAKVIPIPTKV 171
            +  +PI   +
Sbjct: 328 TSARLPITIPI 338


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG  +
Sbjct: 52  GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 111

Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            N G+    +  + + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  P
Sbjct: 112 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 169

Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           IP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S +
Sbjct: 170 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 220

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
           + TP  I  L+G++V+  A G+ H+  + + G++Y +G  +  ++     ++   P+  +
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 280

Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           + K    E   C   HT    T  G++Y WG
Sbjct: 281 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 311



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 143/325 (44%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ TE   V+  G+N  G LG  + +  ++E
Sbjct: 6   KWPIFSLCSPEEIKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 64

Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G      +P      
Sbjct: 65  PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            ++     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 LVNKKVI-EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 175 TSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V        VD+    
Sbjct: 235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV-------VVDKD-RV 286

Query: 350 IVLVSCGWKHTAA--ISEGKILTWG 372
           I + +C   HT+A     G++  WG
Sbjct: 287 IEIAACHSAHTSAAKTQSGQVYMWG 311



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   +V   G   SG LG G        ++ST E  PR +  L G K+   + G   H  
Sbjct: 38  TENDEVFVLGMNCSGCLGTGD-------MQSTIE--PRRLDSLCGKKIACLSYGSGPHVV 88

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
              E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS GE
Sbjct: 89  LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE 148

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           +YTWG N +G +G GS      P RV        V       V ++CG   + A+ E G+
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV-------VNIACGQMCSMAVVENGE 201

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  +   + ++  +V+CG+ HT  L 
Sbjct: 202 VYVWGYNGN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 249

Query: 428 E 428
           +
Sbjct: 250 D 250



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 128/297 (43%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T  
Sbjct: 38  TENDEVFVLGMNCSGCLGTGDMQSTIEP--RRLDSLCG--KKIACLSYGSGPHVVLATEE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +   GF+        ++   L   KV   A G  HS  +  
Sbjct: 94  GEVYTWGHNAYSQLGNGTTNH--GFVPC------QVSTNLVNKKVIEVACGSHHSMVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 146 DGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVW 205

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P R+   QG             +  V+CG+ HT  ++ EG+I
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRIAALQG-----------IRVQRVACGYAHTLVLTDEGQI 254

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 255 YAWG------------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 299



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  V++I+  +  H S+A T  G++YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 312


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L     V   CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 148/314 (47%), Gaps = 41/314 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA ++ +GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGALLEYV 430
            CG  HT   L YV
Sbjct: 293 DCGSYHT---LAYV 303



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG    D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++        ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM------TLNDI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 157/324 (48%), Gaps = 27/324 (8%)

Query: 8   AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
           A +K++LK D+ L    G     + +   + F  ++G+ ++G+LGLG+  +  +P    A
Sbjct: 27  APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
                +K  ACG  HTL  T  G +YA G N+ GQLG+ + N   S   +     +  + 
Sbjct: 85  LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            ++ G + S+A+T DG LYM G NS GQ+GLGK++  + P    V    G      + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G + ++G   SG+LG   E       +  +   P+ + ++    V++A  G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253

Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
             H+  + EN  VY FG     ++     +F+    +R P ++        +   CG  H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
           T ++T  G LYT+G   +G LG+G
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLG 331



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 158/345 (45%), Gaps = 42/345 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + E+G V+  G + F     S+    +  PLRIS           G  H++ +T +G+L+
Sbjct: 9   IPESGAVFTFGKSKFADNAPSKFWLKNDVPLRIS----------CGDEHTALVTENGKLF 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGLG K    +  PT V+ L     K  A G   ++  T  G + + G   
Sbjct: 59  MFGSNNWGQLGLGTKT--TVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGD 264
            G+LG G  +    F          L++       +K+ AAG   SA + ++GR+Y+ GD
Sbjct: 117 EGQLGLGDCNDRTSF---------HLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGD 167

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++   + ++A  P  +S       V CG YH+  +T  G LYT+G  ++G LG+  
Sbjct: 168 NSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL-- 225

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
                S E++        V  I   +V V+CG  HT A++E ++ ++G G          
Sbjct: 226 -----STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTENEVYSFGLG---------- 270

Query: 385 HSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               GQLGHG  + +   P +V      +    +CG NHT  + +
Sbjct: 271 --QFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD 313



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G ++  G N++GQLG+      + +P  +  L+ E V+++  G  H
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALRSERVKLTACGRTH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
           +   T  G LY  G N+ GQLGLG    +          L   F KQ      A G   S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDRT------SFHLVEFFNKQGPIKMLAAGSNTS 153

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++   G    G++G G+ES+ L         TP+ +    G +V   + G+ H
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202

Query: 250 SACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG++   K+ L  E   NH + P  ++ +P    +V CGG HT  LT 
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
             E+Y++G  + G LG G+        RV   F +  V          +CG  HTA I++
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKH-------AACGENHTALITD 313

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             +L     G HG            LG  N  +   PT+     +     V+CG
Sbjct: 314 NGLLYTFGDGRHGKLG---------LGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G G +G+LG G+   ESR  P V   F K  +K  ACG  HT  +T+ G +Y  G    
Sbjct: 267 FGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325

Query: 101 GQLGI-SENIGYSLEP 115
           G+LG+  EN     +P
Sbjct: 326 GKLGLGEENFTNQFKP 341



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  ++++P +C  F  + + ++ CGG H L L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVL 365


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 157/327 (48%), Gaps = 37/327 (11%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K+DI +    G     I++   + F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 54  SKFWFKKDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 111

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
              +K +ACG  HTL LT  G VYATG N+ GQLG+    E   + L     S  K  + 
Sbjct: 112 PEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 169

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           Q+S G + S+A+T DGEL+MWG NS GQ+GL       +P    V    G      + G+
Sbjct: 170 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTV----GKPISWISCGY 225

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G++ ++G   SG+LG       L      +   P+L+  +    +++A  G
Sbjct: 226 YHSAFVTTEGELYTFGEPESGKLG-------LPPKLLVNHKVPQLVPGISEKVIQVACGG 278

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGN--------HARRPSLISKLPYSE--EVVCG 296
             H+  + E   VY FG       L Q G             P +I  +   +   V CG
Sbjct: 279 G-HTVVLTEKA-VYTFG-------LGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCG 329

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
             HT ++T  G LYT+G   +G LG+G
Sbjct: 330 ENHTALITESGLLYTFGDGRHGKLGLG 356



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 54/351 (15%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ++G V+      FG+   +ENI     P +    K   + +S G  H++  T + +L+
Sbjct: 34  IEDSGAVFT-----FGKTKFAENI-----PSKFWFKKDIPISLSCGDEHTAITTGNNKLF 83

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGLG KA   +  PT ++ L     K  A G   ++ +TGGGKV + G   
Sbjct: 84  MFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNHTLVLTGGGKVYATGGNN 141

Query: 206 SGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            G+LG G         ++ F   TS++           K+K  +AG   SA + E+G ++
Sbjct: 142 EGQLGLGDTDERSAFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGELF 188

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           ++GD +  ++  Q   +   P  ++       + CG YH+  +T+ GELYT+G  E+G L
Sbjct: 189 MWGDNSEGQIGLQNITNMCVPHQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKL 248

Query: 321 GIG-SIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
           G+   + V H  P+ V G         I   ++ V+CG  HT  ++E  + T+G G    
Sbjct: 249 GLPPKLLVNHKVPQLVPG---------ISEKVIQVACGGGHTVVLTEKAVYTFGLG---- 295

Query: 379 TFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                     GQLG G    +   P ++   ++ K   V CG NHT  + E
Sbjct: 296 --------QFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITE 338



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 162/365 (44%), Gaps = 52/365 (14%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+K    +L+CG  HT   T    ++  G N++GQLG+      + +P  I  LK E V+
Sbjct: 58  FKKDIPISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVN-KPTCIKALKPEKVK 116

Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
            ++ G +H+  +T  G++Y  G N+ GQLGLG    +          L   FT     KQ
Sbjct: 117 FVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDER------SAFHLISFFTSQHKIKQ 170

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S A+T  G++  WG    G++G             T+   P  +    G  + 
Sbjct: 171 LSAGSNTSAALTEDGELFMWGDNSEGQIG---------LQNITNMCVPHQV--TVGKPIS 219

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSEEVV---C 295
             + G+ HSA +   G +Y FG+    K+        NH + P L+  +  SE+V+   C
Sbjct: 220 WISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNH-KVPQLVPGI--SEKVIQVAC 276

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           GG HT VLT    +YT+G  + G LG+G+     S  +V     +  +  +C       C
Sbjct: 277 GGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVC-------C 328

Query: 356 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKAL 414
           G  HTA I+E  +L     G HG            LG  N  +   PT+  NF + +  L
Sbjct: 329 GENHTALITESGLLYTFGDGRHGKLG---------LGMENFANQFLPTLCSNFLKYIVHL 379

Query: 415 QVSCG 419
            V+CG
Sbjct: 380 -VACG 383



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 14/69 (20%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P +CS F K+ +  +ACGG H L       V+AT     
Sbjct: 345 FGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHML-------VFAT----- 392

Query: 101 GQLGISENI 109
            +LG++E+I
Sbjct: 393 PRLGMAEDI 401


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 170/370 (45%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  V +QI  G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P  V   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--- 296

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + ++I  V+CG +HT A+  S G++  +G G            S GQLG  +
Sbjct: 297 -----MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRS 339

Query: 396 DVDYIHPTIV 405
               + P +V
Sbjct: 340 TKSLMLPQVV 349



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 130/287 (45%), Gaps = 44/287 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   +     G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L++K     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             G LG+ S + L   + P R+           +   +  ++CG  H+  IS+   + +G
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRL--------TTLLGIPLAAIACGGNHSFLISKSGAV-FG 221

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           W          G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 222 W----------GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 30/159 (18%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN+   LG  + +   L 
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLL 83

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
            PE       +  + QIC       CG +H+ A+S+ G++L+WG             +  
Sbjct: 84  IPE-----LQDYVIIQIC-------CGSRHSLALSDWGQVLSWG------------DNDC 119

Query: 389 GQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           GQLGH  D + +  P +V        +Q++CG NH+ AL
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH    S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 157/335 (46%), Gaps = 28/335 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E      P         S++  ACG +HTL LT+ G +++ G ND 
Sbjct: 6   WGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +   +  P  IS L+  +V  +S G  HS A+T  G+++ WG NS GQLG   
Sbjct: 66  GQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG-HD 124

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    P  ++ ++     Q A G   S+A+T  G++ SWGA G G+LG G       
Sbjct: 125 TDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG------- 177

Query: 220 FLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
              +T E   TP L+K L G+ +   A G  HS  + ++G ++ +G     ++   +   
Sbjct: 178 ---TTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVS 234

Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P  +  L       + CG   +  LT  G ++T G+   G LG G+      P  V 
Sbjct: 235 RCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMV- 293

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKI 368
                   + + + I  ++CG +HT A   S GKI
Sbjct: 294 -------FELMGSKITQIACGRRHTLAFVPSRGKI 321



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 17/300 (5%)

Query: 44  GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG  +  L ++ RP   S+ E + +  ++CG  H+L LT  G V++ G N  G
Sbjct: 61  GNNDHGQLGHDTDCLPNK-RPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++     P  I  +  K VVQI++G  HS A+T  GEL+ WG N  GQLGLG  
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV+  PT V+ L+GI     A G   S AV+  G +  WG    G+LG          
Sbjct: 180 GEKVV-TPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND------- 231

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P+ +K L  + V+  + G   SA + + G V+  G     ++     ++   
Sbjct: 232 --LVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL 289

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P ++ +L  S+  ++ CG  HT     S G++Y +G    G LG+G I   ++P+ V+GP
Sbjct: 290 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVISNYNTPQIVRGP 349



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 39/310 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQA 182
           V Q + G  H+  +T DG+L+  G N +GQLG        +P   P  +  L        
Sbjct: 38  VQQAACGTSHTLLLTKDGKLFSCGNNDHGQLG---HDTDCLPNKRPQFISSLENYIVTHV 94

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G+V SWG+   G+LGH  +      L++ +  TPR+IK +    V  
Sbjct: 95  SCGTTHSLALTNWGQVFSWGSNSIGQLGHDTD------LQTYT--TPRMIKTIATKTVVQ 146

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGY 298
            A+G  HS  +  +G ++ +G     ++ L   G     P+L+  L   P +  + CGG 
Sbjct: 147 IASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAF-IACGGN 205

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  ++  G ++ WG N  G LG+  +     P++++   +          +  +SCG  
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRN--------LGVRYISCGDD 257

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            +A ++ EG + T G     GTF        GQLGHG   + I P +V      K  Q++
Sbjct: 258 FSAFLTQEGGVFTCG----AGTF--------GQLGHGTCSNEILPRMVFELMGSKITQIA 305

Query: 418 CGFNHTGALL 427
           CG  HT A +
Sbjct: 306 CGRRHTLAFV 315



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 31/289 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG   +G+LGLG    + + +P +++       +QAA G   ++ +T  GK+ S G 
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH  +              P+ I  LE   V   + G  HS  +   G+V+ +G
Sbjct: 63  NDHGQLGHDTD--------CLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWG 114

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             ++ ++           P +I  +      ++  G +H+  LT+ GEL++WG+N  G L
Sbjct: 115 SNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQL 174

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
           G+G+     + E+V  P     +  I   I  ++CG  H+ A+S+ G I  WG      T
Sbjct: 175 GLGT-----TGEKVVTPTLVKSLAGI--PIAFIACGGNHSFAVSKSGAIFGWG----KNT 223

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           F        GQLG  + V    P  +    N+    +SCG + +  L +
Sbjct: 224 F--------GQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQ 264



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL  L SR  P          ++ ++CG   + FLT+ G V+  G   FGQ
Sbjct: 219 WGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQ 278

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
           LG        L  +    +  ++ QI+ G  H+ A +   G++Y
Sbjct: 279 LGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 172/367 (46%), Gaps = 38/367 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LGLGS E+             S+ ++A G  HT++LT T  VY+ G N+FGQ
Sbjct: 4   WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  ++      P  ++G   +E+  ++ G   S AI   G L+ WG++ NG+L   + +
Sbjct: 63  LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                +  K+   S +   Q A G +  +A+T  G +LSWG+   G+LG G  SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-QEGNHARR 280
                  P +I  L    +    AG  HS  +  +G ++ +G     ++      +    
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 281 PSLISKLPYSEEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P L+  L + E V    G  H+   T  G +++WG   NG LG  S+  +  P+++    
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKI---- 284

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
               ++ + T++  + CG +HT ++++ + L  G+          G +S  QLG  ND  
Sbjct: 285 ----MELMGTTVCQICCGRRHTISLTDKRKL-LGF----------GLNSNNQLGTHNDTS 329

Query: 399 YIHPTIV 405
              P  +
Sbjct: 330 ARLPITI 336



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 147/343 (42%), Gaps = 42/343 (12%)

Query: 92  VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +Y  G ND+GQLG+ SEN+  S  P  I    + V+ I++G  H+  +T   ++Y  G N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQLG  K   +    P+ V           A G   S+A+   G +  WG   +G L 
Sbjct: 59  EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             Q+S           + P+L+ ++    V   A G  H   + E G +  +G     ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164

Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L         P++I+ L   P S+ +  G YH+ VL+  G L+TWG N  G LG G+ D
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 385
              S  R+        V       V V+ G +H+   +  G + +WG GG+         
Sbjct: 224 SFQSSPRLVKTLRHQEV-------VFVAMGEEHSVCRTRNGGVFSWGHGGN--------- 267

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              GQLGH +  +   P  +         Q+ CG  HT +L +
Sbjct: 268 ---GQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTD 307



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)

Query: 43  WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  ++G+LG G+ +S +  P +        +  +A G  H++  T  G V++ G    G
Sbjct: 209 WGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNG 268

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++    +P +I  L    V QI  G  H+ ++T   +L  +G NSN QLG    
Sbjct: 269 QLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHND 327

Query: 161 AAKVIPIPTKV 171
            +  +PI   +
Sbjct: 328 TSARLPITIPI 338


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L     V   CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 148/314 (47%), Gaps = 41/314 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGALLEYV 430
            CG  HT   L YV
Sbjct: 293 DCGSYHT---LAYV 303



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG    D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++        ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM------TLNDI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 170/370 (45%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  V +QI  G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P  V   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--- 296

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + ++I  V+CG +HT A+  S G++  +G G            S GQLG  +
Sbjct: 297 -----MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRS 339

Query: 396 DVDYIHPTIV 405
               + P +V
Sbjct: 340 TKSLMLPQVV 349



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 130/287 (45%), Gaps = 44/287 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   +     G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L++K     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             G LG+ S + L   + P R+           +   +  ++CG  H+  IS+   + +G
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRL--------TTLLGIPLAAIACGGNHSFLISKSGAV-FG 221

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           W          G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 222 W----------GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 30/159 (18%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN+   LG  + +   L 
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLL 83

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
            PE       +  + QIC       CG +H+ A+S+ G++L+WG             +  
Sbjct: 84  IPE-----LQDYVIIQIC-------CGSRHSLALSDWGQVLSWG------------DNDC 119

Query: 389 GQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           GQLGH  D + +  P +V        +Q++CG NH+ AL
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 162/353 (45%), Gaps = 41/353 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  +R  PV+      H +  +  G   ++ L + G V+  G N+ GQ
Sbjct: 57  WGYGDRGQLGDGTWNTRTTPVMAKNL-NHVID-IHSGVRSSMALRQDGTVWTWGANENGQ 114

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI   I     P ++ GL   +  IS G  +H  A++ +G ++ WGKN NG+LG G   
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTI 172

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  LS + T  AA G+  S+A+   G V +WG  GSG LG G         
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T  + P  +  L    V   AAG  HS  I ++G V+ +G+     +      H  RP
Sbjct: 221 -TTDRHVPVQVAGL--TDVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTRP 277

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L +   V  GGYH+  +   G +++WG N    LG+ S      P  V G     
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPVPG----- 332

Query: 342 PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                   +  +S G  H+ A+ +   + WGW          G++SGGQ+G G
Sbjct: 333 -----IEHVREISAGGFHSVAMKKDGTV-WGW----------GYNSGGQIGDG 369



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 20/283 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
           WG  + G+LG+G++ +   P          +KA++ G A H + L+E G V+  G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG    I  +  P+ ++GL  +V  I+ G ++S A+  DG ++ WG N +G+LG G   
Sbjct: 165 ELGNGTTIQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  +V  L+ +     A G   S+A+   G V +WG    G LG G         
Sbjct: 223 DRHVPV--QVAGLTDVMA--IAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTR------- 271

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T    P  ++ L+ + V +A  G+ HS  +D  G V+ +GD +  ++       +  P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIP 327

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             +  + +  E+  GG+H+  +   G ++ WG N  G +G G+
Sbjct: 328 VPVPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGT 370



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 26/257 (10%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +I  GY+H++++   GE+Y WG    GQLG G    +  P+  K   L+ +    +  G 
Sbjct: 37  KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G V +WGA  +G+LG G  +++           P  +  L G+K  I+   
Sbjct: 93  RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H   + ENG V+ +G     ++          P L++ L     +  GGY++  L S 
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G ++ WG N +G LG G+    H P +V G           T ++ ++ G  H+ AI + 
Sbjct: 203 GTVWAWGVNGSGELGDGTTTDRHVPVQVAG----------LTDVMAIAAGGSHSLAIKQD 252

Query: 367 KILTWGWG-GSHGTFSE 382
             + W WG  ++GT  +
Sbjct: 253 GTV-WAWGNNTYGTLGD 268



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 19/232 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G LG G+   R  PV  +      + A+A GG+H+L + + G V+A G N +G 
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGLTD--VMAIAAGGSHSLAIKQDGTVWAWGNNTYGT 265

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +   P+++  L + +V ++ G +HS A+   G ++ WG NS  QLGL   A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNAS 323

Query: 163 KVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +IP+P   +E +  I    +A GF  SVA+   G V  WG    G++G G  ++  G  
Sbjct: 324 SLIPVPVPGIEHVREI----SAGGF-HSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRGI- 377

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                  P L K +         +G L+   I  +  V +   +A D M  Q
Sbjct: 378 -------PTLTKAVLDTTSPDTGSGSLNPHSITSD-SVALEWPKASDNMTEQ 421


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 155/333 (46%), Gaps = 24/333 (7%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +  +++  ACGG+HTL LT+ G +Y  G ND 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N   +  P  IS L+  +V Q+S G  HS A+T  G+L+ WG N+ GQLG   
Sbjct: 66  GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 P P  ++ ++     Q + G    +A+T  G++ +WGA   G+LG G     + 
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   T  L+K L G+ +   A G  HS  + ++G ++ +G     ++   + +   
Sbjct: 185 --------TATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRC 236

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       + CG   +  LT  G ++T G    G LG G+      P  V   
Sbjct: 237 YPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV--- 293

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKI 368
                 + + + I  ++CG KHT A   S GK+
Sbjct: 294 -----FELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 150/304 (49%), Gaps = 21/304 (6%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG    +L ++ RP   SA E + +  ++CG +H+L LT  G +++ G N  G
Sbjct: 61  GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++     P  I  +  K VVQIS G+ H  A+T  GEL+ WG N  GQLGLG  
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV P  T V+ L+GI     A G   S AV+  G +  WG    G+LG          
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  +K L  + V+  + G   S  + + G V+  G     ++    G H   
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287

Query: 281 --PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P ++ +L  S+  ++ CG  HT     S G++Y +G    G LG+GS    ++P+ V+
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVR 347

Query: 336 GPFS 339
           GP+S
Sbjct: 348 GPWS 351



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 137/310 (44%), Gaps = 39/310 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQA 182
           V Q + G  H+  +T DG+LY  G N +GQLG        +P   P  +  L      Q 
Sbjct: 38  VQQAACGGSHTLLLTKDGKLYTCGNNDHGQLG---HDTNNLPNKRPQFISALENYIVTQV 94

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G++ SWG+  +G+LGH         L   S   PR+IK +    V  
Sbjct: 95  SCGLSHSLALTNWGQLFSWGSNATGQLGHD--------LDMVSYPAPRMIKSIATKTVVQ 146

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGY 298
            + G  H   +  +G ++ +G     ++ L   G      +L+  L   P +  + CGG 
Sbjct: 147 ISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAF-IACGGN 205

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           H+  ++  G ++ WG N  G LG+  +D    P +++   S          +  +SCG  
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRS--------LGVRYISCGDD 257

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            +  ++ EG + T G G    TF        GQLGHG   + I P +V      K  Q++
Sbjct: 258 FSVFLTQEGGVFTCGLG----TF--------GQLGHGTHGNEILPRMVFELMGSKITQIA 305

Query: 418 CGFNHTGALL 427
           CG  HT A +
Sbjct: 306 CGRKHTLAFV 315



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 33/281 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG   +G+LGLG    + +  P +++       +QAA G   ++ +T  GK+ + G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH           +     P+ I  LE   V   + G  HS  +   G+++ +G
Sbjct: 63  NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114

Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++    +      P +I  +      ++ CG  H   LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
           G+G+         +    +  P       I  ++CG  H+ A+S+ G I  WG      T
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIP-------IAFIACGGNHSFAVSKSGAIFGWG----KNT 223

Query: 380 FSEDGHSSGGQLGHGNDVD-YIHPTIVNFGENVKALQVSCG 419
           F        GQLG  ND+D   +PT +    ++    +SCG
Sbjct: 224 F--------GQLGL-NDLDSRCYPTQLKTLRSLGVRYISCG 255



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 20/120 (16%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           LY WGS  +G LG+G I+     E+V  P  E    Q   ++   +CG  HT  ++ +GK
Sbjct: 3   LYCWGSTVHGELGLGGIE----EEQVMTP-REMDWSQ-AANVQQAACGGSHTLLLTKDGK 56

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           + T G            ++  GQLGH  N++    P  ++  EN    QVSCG +H+ AL
Sbjct: 57  LYTCG------------NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLAL 104


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 169/381 (44%), Gaps = 44/381 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P+     E+  +KA+A   + +L L +TG V+A G N  GQ
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLER--VKAVASMDSDSLALLDTGAVFAWGANGSGQ 340

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +    +  P  + GL   V  +  G  H+  +  DG L+ WG   +GQLG G    
Sbjct: 341 LGDGDTTDRA-TPGPVPGLNA-VASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSER 398

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V+P P  V  L+G+ +   A G   S+A  G G V +WG    G+LG G  +     +R
Sbjct: 399 HVVPAP--VMRLAGVTSM--ATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVR 454

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                    ++ L GV+   +AA   HS  +  +G V+ +G  A  ++         RP 
Sbjct: 455 ---------VEGLGGVRSVASAA--HHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPV 503

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  GG H   L S G ++ WG N  G LG G+     +P RV G      
Sbjct: 504 AVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSG------ 557

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                 ++V V+ G   + A+ S+G + TWG G     F        GQLG G  V  + 
Sbjct: 558 ----LGAVVAVAAGSYFSMALQSDGTVWTWGEG-----FE-------GQLGDGGGVQRLS 601

Query: 402 PTIVNFGENVKALQVSCGFNH 422
           P  V    N+   +V+ G  H
Sbjct: 602 PVRVEGLANIT--RVAAGSAH 620



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 156/345 (45%), Gaps = 42/345 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           PV  +A E   + ++  G AH+L L   G V+  G N  GQLG       +  P+R++GL
Sbjct: 102 PVRLAALEN--IVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRA-TPMRVAGL 158

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              VV ++ G  HS A+  DG ++ WG N +GQLG G     + P   +V  L+G+    
Sbjct: 159 DS-VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTP--EQVPGLNGVVALA 215

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
           A  GF+ ++AV   G V +WG+ GSG+LG G          ST   +P  + EL G+ +V
Sbjct: 216 A--GFDFTLAVLEDGTVRAWGSNGSGQLGDGT---------STQRLSPVKVSELSGITEV 264

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           +   AG  H+  + ++G V+ +G  A  ++     N    P  +  L   + V      +
Sbjct: 265 R---AGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L   G ++ WG+N +G LG G      +P  V G            ++  V  G +H 
Sbjct: 322 LALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPG----------LNAVASVVGGAQHA 371

Query: 361 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
             + +   L W WGG             GQLGHG    ++ P  V
Sbjct: 372 LVLRKDGTL-WAWGGGL----------SGQLGHGGSERHVVPAPV 405



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 175/416 (42%), Gaps = 57/416 (13%)

Query: 27   CKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG 79
            C R ++S +Q   A         WG    G+LG G+   R  P +        + ALA G
Sbjct: 810  CVRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLR--GVVALAAG 867

Query: 80   GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
            G  ++ L   G V++ G N  GQLG       +L P  +  L   V  ++ G  H+ A+ 
Sbjct: 868  GDASVALRADGSVWSWGGNASGQLGDGTLTDRAL-PAHVEHLSNAVA-VAVGETHALAVG 925

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
             DG L+ WG N +GQLG G  A  + P+  +V+ L  + +  A   F  SVAV   G   
Sbjct: 926  EDGALWAWGANGSGQLGDGGTAPSLTPV--RVKGLERVASVAAGRAF--SVAVRDDGTAW 981

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            +WG   SG+LG G            +   P  +  L+G++    +AG  H   +  +G V
Sbjct: 982  AWGTNPSGQLGDGTNH---------ARSVPNQVTSLKGIRAM--SAGAHHVVALSADGTV 1030

Query: 260  YIFGDRAVDKMLFQEGNHARRPS-----LISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
            + +G    D  L Q G+ +  P+      + +L   E V  G   T  +   G    WGS
Sbjct: 1031 WTWG----DNTLGQLGDGSSSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGS 1086

Query: 315  NENGCLGIGSIDVLHSPE--RVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
            NE G LG G      +P   +++GP    PV  +       + G      +S+G + TWG
Sbjct: 1087 NEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVR------AWGQHAVVQMSDGTVQTWG 1140

Query: 373  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                  TF        GQLG G       P  V    +V A  VS G  H+ ALL 
Sbjct: 1141 ----DNTF--------GQLGDGTTTRRAVPLTVYGLASVVA--VSSGAWHSLALLS 1182



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 17/295 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+   R RPV  +      + A+  GG H L +   G V+  G N FGQ
Sbjct: 1189 WGANGFGQLGDGTSTPRTRPVQVAGLGD--VVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       SL P R+ GL+  VV ++ G H+S A+  DG L  WG N++GQLG G    
Sbjct: 1247 LGDGTAESRSL-PTRVEGLEG-VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT 1304

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +     ++V             G   +VA+ G G V +WG    G+LG G   + +    
Sbjct: 1305 RY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM---- 1356

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                  PR +  L    V    AG  H+  +   G V+ +G  +  ++   +  +   P 
Sbjct: 1357 ---RLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPL 1411

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L     V  G   +  +   G + +WGS+  G LG+G+     SP +V  P
Sbjct: 1412 RVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQVALP 1466



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 147/330 (44%), Gaps = 37/330 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G  H+L+L+  G V+A G N  GQLG +E     L P+R++ L+  +V + +G  HS
Sbjct: 63  IAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALEN-IVSVVSGDAHS 121

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG NS+GQLG G    +  P+  +V  L  +     A G   S+A+   
Sbjct: 122 LALGADGSVWTWGGNSSGQLGDGTTTDRATPM--RVAGLDSVVA--VAAGDFHSLALRED 177

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G     L         TP  +  L GV     AAGF  +  + E
Sbjct: 178 GTVWAWGTNFHGQLGRGHTQPGL---------TPEQVPGLNGVVAL--AAGFDFTLAVLE 226

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V  +G     ++          P  +S+L    EV  G YH   L   G ++TWGSN
Sbjct: 227 DGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWGSN 286

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
            +G LG G+ +    P +V G      V  + +  +         A +  G +  WG  G
Sbjct: 287 ASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDSL---------ALLDTGAVFAWGANG 337

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           S            GQLG G+  D   P  V
Sbjct: 338 S------------GQLGDGDTTDRATPGPV 355



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 177/482 (36%), Gaps = 134/482 (27%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R RPV        S+ A+A GG+H L L   G V+A G N  GQ
Sbjct: 483 WGRNAAGQLGDGTTLDRARPVAVPGLT--SVTAVAAGGSHVLALRSDGSVWAWGYNALGQ 540

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+R+SGL   VV ++ G + S A+  DG ++ WG+   GQLG G    
Sbjct: 541 LGDGTTV-DRLTPVRVSGLGA-VVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQ 598

Query: 163 KVIPI------------------------------------------------PTKVECL 174
           ++ P+                                                P +V  L
Sbjct: 599 RLSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGL 658

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
            GI       G   S+A+ G G V +WG  G G+LG G           TS   P LI  
Sbjct: 659 QGITAVSG--GRSHSMALQGDGTVRAWGYNGYGQLGDGTL---------TSRVRPALIPG 707

Query: 235 LEGVK----------------------------VKIAAAGF------------------- 247
           L G++                            + + AAG+                   
Sbjct: 708 LTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVG 767

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H+  +  +G V  +G+    ++      H   P  +  +P    V  G  H+  L   
Sbjct: 768 RAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASGIQHSLALACD 827

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G ++ WG+N  G LG G+     +P  V+G         +   + L + G    A  ++G
Sbjct: 828 GTVWAWGANARGQLGDGTTTPRVTPGLVEG---------LRGVVALAAGGDASVALRADG 878

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            +  W WGG          ++ GQLG G   D   P  V    N  A+ V+ G  H  A+
Sbjct: 879 SV--WSWGG----------NASGQLGDGTLTDRALPAHVEHLSN--AVAVAVGETHALAV 924

Query: 427 LE 428
            E
Sbjct: 925 GE 926



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 153/354 (43%), Gaps = 36/354 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  +R  P   ++ +   ++A++ G  H + L+  G V+  G N  GQ
Sbjct: 983  WGTNPSGQLGDGTNHARSVPNQVTSLK--GIRAMSAGAHHVVALSADGTVWTWGDNTLGQ 1040

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG   +    + P ++  L+  V  ++ G   + A+ +DG    WG N  GQLG GK   
Sbjct: 1041 LGDGSSSPTGMWPRQVPELRG-VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGP 1099

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++ P+  K+E        +    + Q +V     G V +WG    G+LG G         
Sbjct: 1100 QLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGT-------- 1151

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             +T    P  +  L    V   ++G  HS  +  +G V+ +G     ++         RP
Sbjct: 1152 -TTRRAVPLTVYGL--ASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRP 1208

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              ++ L     +  GGYH   + S G ++TWG N  G LG G+ +    P RV+G     
Sbjct: 1209 VQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEG----- 1263

Query: 342  PVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                    +V V+ G  ++ A+            S GT S  G+++ GQLG G 
Sbjct: 1264 -----LEGVVAVAGGDHYSLALH-----------SDGTLSAWGNNASGQLGDGT 1301



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 160/377 (42%), Gaps = 44/377 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG G  E   R VV +   + + + ++A G  H+L     G V+A G N +G
Sbjct: 383 WGGGLSGQLGHGGSE---RHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYG 439

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   +       +R+ GL   V  +++  HHS A+ +DG ++ WG+N+ GQLG G   
Sbjct: 440 QLG-DGSTAERHAAVRVEGLGG-VRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTL 497

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  L+ +     A G    +A+   G V +WG    G+LG G         
Sbjct: 498 DRARPV--AVPGLTSV--TAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGT-------- 545

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    TP  +  L G  V +AA  +  S  +  +G V+ +G+    ++    G     P
Sbjct: 546 -TVDRLTPVRVSGL-GAVVAVAAGSYF-SMALQSDGTVWTWGEGFEGQLGDGGGVQRLSP 602

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L     V  G  H   +   G ++ WG N  G LG GS      P +V G     
Sbjct: 603 VRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPG----- 657

Query: 342 PVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                   I  VS G  H+ A+  +G +  WG+ G             GQLG G     +
Sbjct: 658 -----LQGITAVSGGRSHSMALQGDGTVRAWGYNGY------------GQLGDGTLTSRV 700

Query: 401 HPTIVNFGENVKALQVS 417
            P ++     ++AL  S
Sbjct: 701 RPALIPGLTGIQALHPS 717


>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
           protein 1-like [Metaseiulus occidentalis]
          Length = 550

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 17/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  Y ++G         PV+   F++  +  +ACGG H++  T +G VY  G N+ GQ
Sbjct: 121 WGHNGYSQVGNDQNSQANSPVL--VFDRQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQ 178

Query: 103 LGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG+S ++ +   P ++ G   E+    IS G++ ++A+   GE+Y+WG N NGQLGLG  
Sbjct: 179 LGLSASVNHQ-SPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWGSNGNGQLGLGSL 237

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P P K+E L  +F K+ A GF  ++A+T  G V  WGA   G+LG   +      
Sbjct: 238 TNQ--PFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENK------ 289

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
              T++  P L+K + G   ++AA  +   SA + E  +V ++G
Sbjct: 290 ---TNQSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWG 330



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 168/373 (45%), Gaps = 41/373 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
           G+   G LG+G   S   P       K  +++ ACG G H L LT  G VY  G N + Q
Sbjct: 69  GSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQ 128

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G  +N   +  P+ +   ++ V QI+ G +HS   TV G +Y WG+N+ GQLGL     
Sbjct: 129 VGNDQN-SQANSPVLVFD-RQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVN 186

Query: 163 KVIPIPT-----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              P        +++C +GI     + G   + AV   G+V  WG+ G+G+LG       
Sbjct: 187 HQSPRKVGGAIAEMKC-TGI-----SCGHNFTTAVFDTGEVYVWGSNGNGQLG------- 233

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           LG L  T++  P  I++L+ V +K  A GF H+  + + G VY++G  A+ ++  +   +
Sbjct: 234 LGSL--TNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENKTN 291

Query: 278 ARRPSLISKLP-YSEEVVCGGYH--TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              P L+  +     EV    Y+  +  +T   ++  WG      + + +     S   V
Sbjct: 292 QSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWGLCRGQHVTVPTETPFDSVHDV 351

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
              FS  PV  +    ++V   W++  A++  +            F    HS    L  G
Sbjct: 352 FVAFSSVPVTPV---PMIVRSVWENKLALAMAE-----------HFDNPAHSDLKFLVEG 397

Query: 395 NDVDYIHPTIVNF 407
             + ++H T++ F
Sbjct: 398 KKI-HVHKTVLKF 409



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 30/243 (12%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V + G+  +G LG G   S L         +P  ++ L    V+  A G 
Sbjct: 55  EALLVTEEDEVWAMGSNAAGCLGIGDTRSCL---------SPTKVEGLSKKGVQSFACGT 105

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H   +   G VY +G     ++   + + A  P L+       ++ CGGYH+ + T  
Sbjct: 106 GPHVLALTARGEVYGWGHNGYSQVGNDQNSQANSPVLVFDRQPVAQIACGGYHSVIRTVS 165

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           G +YTWG N  G LG+ +     SP +V G  +E      CT I   SCG   T A+ + 
Sbjct: 166 GGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMK----CTGI---SCGHNFTTAVFDT 218

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G++  WG  G+            GQLG G+  +   P  +   ++V   +V+CGF+HT A
Sbjct: 219 GEVYVWGSNGN------------GQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLA 266

Query: 426 LLE 428
           L +
Sbjct: 267 LTD 269



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 131/305 (42%), Gaps = 47/305 (15%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITV 140
           L +TE   V+A G N  G LGI +     L P ++ GL K+ VQ     TG  H  A+T 
Sbjct: 57  LLVTEEDEVWAMGSNAAGCLGIGDTRS-CLSPTKVEGLSKKGVQSFACGTG-PHVLALTA 114

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA----ALGFEQSVAVTGGG 196
            GE+Y WG N   Q+G  + +    P+         +F +Q     A G   SV  T  G
Sbjct: 115 RGEVYGWGHNGYSQVGNDQNSQANSPVL--------VFDRQPVAQIACGGYHSVIRTVSG 166

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDE 255
            V +WG    G+         LG   S +  +PR +   +  +K    + G   +  + +
Sbjct: 167 GVYTWGQNNCGQ---------LGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFD 217

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
            G VY++G     ++      +   P  I +L   + ++V CG  HT  LT  G +Y WG
Sbjct: 218 TGEVYVWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWG 277

Query: 314 SNENGCLGI-----GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           +N  G LG       SI VL   + + G  +E    Q   +          +AA++E  K
Sbjct: 278 ANALGQLGTENKTNQSIPVLM--KTIHGRINEVAATQYNQT----------SAAMTETSK 325

Query: 368 ILTWG 372
           +L WG
Sbjct: 326 VLMWG 330



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 38/273 (13%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
           +T + E++  G N+ G LG+G   + + P  TKVE LS    +  A G     +A+T  G
Sbjct: 59  VTEEDEVWAMGSNAAGCLGIGDTRSCLSP--TKVEGLSKKGVQSFACGTGPHVLALTARG 116

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V  WG  G  ++G+ Q S            +P L+ + + V  +IA  G+ HS     +
Sbjct: 117 EVYGWGHNGYSQVGNDQNS---------QANSPVLVFDRQPV-AQIACGGY-HSVIRTVS 165

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWG 313
           G VY +G     ++      + + P  +       +   + CG   T  +   GE+Y WG
Sbjct: 166 GGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWG 225

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWG 372
           SN NG LG+GS+     P ++     E   D     I  V+CG+ HT A++ EG +  W 
Sbjct: 226 SNGNGQLGLGSLTNQPFPVKI-----EQLKDVF---IKKVACGFSHTLALTDEGLVYVW- 276

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
                      G ++ GQLG  N  +   P ++
Sbjct: 277 -----------GANALGQLGTENKTNQSIPVLM 298



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+   G+LGLGSL ++  PV     +   +K +ACG +HTL LT+ G VY  G N  G
Sbjct: 223 VWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALG 282

Query: 102 QLGISENIGYSLEPLR--ISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLG 158
           QLG       S+  L   I G   EV   +T Y+ +S A+T   ++ MW        GL 
Sbjct: 283 QLGTENKTNQSIPVLMKTIHGRINEVA--ATQYNQTSAAMTETSKVLMW--------GLC 332

Query: 159 KKAAKVIPIPTKVECLSGIF 178
           +     +P  T  + +  +F
Sbjct: 333 RGQHVTVPTETPFDSVHDVF 352


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 160/338 (47%), Gaps = 55/338 (16%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           + G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA G N  G
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDG 203

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +   +     + ++ Q+S G + S+A+T DGELYMWG NS GQ+GL  +
Sbjct: 204 QLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASE 263

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +   +P       + G      + G+  S  VT  G++ ++G   +G+LG   E      
Sbjct: 264 SNVCVP----CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSE------ 313

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------DRA 266
            +  +   P+L+  + G KV   A G  H+  + E   VY FG              + +
Sbjct: 314 -QLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEED-VYTFGLGEFGQLGLGTCIFETS 370

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           V K++     H R+     K+ Y   V CG  HT +++  G +YT+G   +G LG+G  +
Sbjct: 371 VPKVV----EHLRK----QKIHY---VACGENHTALISDTGLMYTFGDGRHGKLGLGEEN 419

Query: 327 VLHSPERVQGPFSESPVDQICT-----SIVLVSCGWKH 359
                      F+   +  +C+     S+ LV+CG  H
Sbjct: 420 -----------FTNQFIPTLCSNFLRFSVHLVACGGCH 446



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 169/376 (44%), Gaps = 48/376 (12%)

Query: 55  SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           S+E +   ++   F K     L            +G V+      FG+   +ENI     
Sbjct: 65  SVEEKRETMIYDDFRKKD--ELRANTYRKFRTRHSGAVFT-----FGKSKFAENI----- 112

Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
           P +       + Q+S G  H++ +T + +LYM G N+ GQLGLG K    +  PT V+ L
Sbjct: 113 PSKFWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKT--TVNKPTCVKAL 170

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                K AA G   ++  T GG V + G    G+LG G       F    S +T R    
Sbjct: 171 KPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTF-HQISFFTSRY--- 226

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEV 293
               K+K  +AG   SA + E+G +Y++GD +  ++ L  E N      ++   P S  V
Sbjct: 227 ----KIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVS-WV 281

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIV 351
            CG YH+ ++T+ GELYT+G  ENG LG+ S  + +   P+ V G         I   + 
Sbjct: 282 SCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPG---------ISGKVN 332

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGEN 410
            V+CG  HT A++E  + T+G G              GQLG G  + +   P +V     
Sbjct: 333 QVACGGGHTVALTEEDVYTFGLG------------EFGQLGLGTCIFETSVPKVVEHLRK 380

Query: 411 VKALQVSCGFNHTGAL 426
            K   V+CG NHT  +
Sbjct: 381 QKIHYVACGENHTALI 396



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 162/359 (45%), Gaps = 48/359 (13%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST- 130
           +L  L+CG  HT F+T    +Y  G N++GQLG+      + +P  +  LK E V+ +  
Sbjct: 122 TLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKFAAC 180

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALG 185
           G +H+   T  G +Y  G NS+GQLGLG    +     T    +S  FT     KQ + G
Sbjct: 181 GRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEER-----TTFHQIS-FFTSRYKIKQLSAG 234

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S A+T  G++  WG    G++G   ES++    R            + G  V   + 
Sbjct: 235 SNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV-----------VIGKPVSWVSC 283

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTC 301
           G+ HSA +  +G +Y FG+    K+     Q  NH R P L+  +     +V CGG HT 
Sbjct: 284 GYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNH-RIPQLVPGISGKVNQVACGGGHTV 342

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            LT   ++YT+G  E G LG+G+     S  +V     +         I  V+CG  HTA
Sbjct: 343 ALTE-EDVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQ-------KIHYVACGENHTA 394

Query: 362 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            IS+ G + T+G  G HG            LG  N  +   PT+ +         V+CG
Sbjct: 395 LISDTGLMYTFG-DGRHGKLG---------LGEENFTNQFIPTLCSNFLRFSVHLVACG 443



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 38/254 (14%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q + G E +  VTG  K+   G+   G+LG G ++++           P  +K L+  KV
Sbjct: 125 QLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTV---------NKPTCVKALKPEKV 175

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLPYSEEVVCGG 297
           K AA G  H+    E G VY  G  +  ++     +E     + S  +     +++  G 
Sbjct: 176 KFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGS 235

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             +  LT  GELY WG N  G +G+ S   +  P RV           I   +  VSCG+
Sbjct: 236 NTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVV----------IGKPVSWVSCGY 285

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKAL 414
            H+A ++ +G++ T+G                G+LG  ++    H  P +V  G + K  
Sbjct: 286 YHSALVTTDGELYTFG------------EPENGKLGLSSEQLKNHRIPQLVP-GISGKVN 332

Query: 415 QVSCGFNHTGALLE 428
           QV+CG  HT AL E
Sbjct: 333 QVACGGGHTVALTE 346



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + S+  +ACGG H L  
Sbjct: 405 FGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVF 450


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG  +
Sbjct: 57  GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 116

Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            N G+    +  + + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  P
Sbjct: 117 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 174

Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           IP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S +
Sbjct: 175 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 225

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
           + TP  I  L+G++V+  A G+ H+  + + G++Y +G  +  ++     ++   P+  +
Sbjct: 226 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 285

Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           + K    E   C   HT    T  G++Y WG
Sbjct: 286 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 316



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ TE   V+  G+N  G LG  + +  ++E
Sbjct: 11  KWPIFSLCSQEELKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 69

Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G      +P      
Sbjct: 70  PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 129

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            ++     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 130 LVNKKVI-EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 179

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 K+ +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 180 TSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 239

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V        VD+    
Sbjct: 240 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV-------VVDKD-RV 291

Query: 350 IVLVSCGWKHTAA--ISEGKILTWG 372
           I + +C   HT+A     G++  WG
Sbjct: 292 IEIAACHSAHTSAAKTQSGQVYMWG 316



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   +V   G   SG LG G        ++ST E  PR +  L G K+   + G   H  
Sbjct: 43  TENDEVFVLGMNCSGCLGTGD-------MQSTIE--PRRLDSLCGKKIACLSYGSGPHVV 93

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
              E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS GE
Sbjct: 94  LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE 153

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           +YTWG N +G +G GS      P RV        V       V ++CG   + A+ E G+
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV-------VNIACGQMCSMAVVENGE 206

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  +   + ++  +V+CG+ HT  L 
Sbjct: 207 VYVWGYNGN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 254

Query: 428 E 428
           +
Sbjct: 255 D 255



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T  
Sbjct: 43  TENDEVFVLGMNCSGCLGTGDMQSTIEP--RRLDSLCG--KKIACLSYGSGPHVVLATEE 98

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +   GF+    + +  L+ +    KV   A G  HS  +  
Sbjct: 99  GEVYTWGHNAYSQLGNGTTNH--GFV--PCQVSTNLVNK----KVIEVACGSHHSMVLTS 150

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 151 DGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVW 210

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P R+   QG             +  V+CG+ HT  ++ EG+I
Sbjct: 211 GYNGNGQLGLGSSGNQPTPCRIAALQG-----------IRVQRVACGYAHTLVLTDEGQI 259

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 260 YAWG------------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 304



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 209 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 268

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  V++I+  +  H S+A T  G++YMWG+   GQ     
Sbjct: 269 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 321

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 322 --SVILPHLTHFACTDDVF 338


>gi|159039899|ref|YP_001539152.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918734|gb|ABW00162.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 554

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 167/390 (42%), Gaps = 39/390 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG LG GS      PVV S     ++ A+A GG H+L LT  G V A G ND GQ
Sbjct: 61  WGQNDYGELGNGSTAGSNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGRNDHGQ 120

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +   +EP+ +       V  I+ G  H+ A+T  G +  WG+N  GQLG G   
Sbjct: 121 LGDGSTVDK-VEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLGDGSTV 179

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K+ P+   V+  +G      A G + ++A+T  G V +WG+  SG LG G         
Sbjct: 180 DKLEPV--SVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGELGDG--------- 228

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    TP L+            AG  HS  +     V+ +GD + D  L    N  +  
Sbjct: 229 TTIDRTTPILVGLPG--TTVTTTAGGGHSFAVTSADTVHAWGDNS-DGQLGNGNNVDQLE 285

Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            ++  +P    V     G  H+  LT+ G L  WG+N+ G LG G+      P  V  P 
Sbjct: 286 PVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQLGNGNTLDQSEPVDVNLPT 345

Query: 339 SESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
             +          + +    H+ A++  G +L W            G +  G+LG G+ +
Sbjct: 346 GTT-------ITAIATRDSDHSLALTAAGSVLAW------------GENDDGELGDGSTL 386

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           D   P  VN         ++ G  H+ AL+
Sbjct: 387 DRSEPVDVNLPTGTTVTAIAAGDGHSLALV 416



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 34/319 (10%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            + A G ND+G+LG     G S  P+ +S      V  ++ G  HS A+T  G +  WG+
Sbjct: 57  TILAWGQNDYGELGNGSTAG-SNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGR 115

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLG G    KV P+   V+  +G      A G + ++A+T  G VL+WG    G+L
Sbjct: 116 NDHGQLGDGSTVDKVEPV--SVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQL 173

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G          +  +  P  +    G  V   A G  H+  I   G V+ +G  +  +
Sbjct: 174 GDGS---------TVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGE 224

Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVL 328
           +          P L+     +     GG H+  +TS   ++ WG N +G LG G ++D L
Sbjct: 225 LGDGTTIDRTTPILVGLPGTTVTTTAGGGHSFAVTSADTVHAWGDNSDGQLGNGNNVDQL 284

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 388
             P  V  P           ++  ++ G  H+ A++    L   W          G++  
Sbjct: 285 E-PVVVSMPLGA--------TVTAIAGGNDHSLALTAAGALL-AW----------GNNDV 324

Query: 389 GQLGHGNDVDYIHPTIVNF 407
           GQLG+GN +D   P  VN 
Sbjct: 325 GQLGNGNTLDQSEPVDVNL 343



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 38/284 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG+N  G+LG G  A    P+   V   S       A G + S+A+T  G VL+WG 
Sbjct: 58  ILAWGQNDYGELGNGSTAGSNTPV--VVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGR 115

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG G          +  +  P  +    G  V   A G  H+  +   G V  +G
Sbjct: 116 NDHGQLGDGS---------TVDKVEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWG 166

Query: 264 DRAVDKMLFQEGNHARRPSLIS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGC 319
                +    +G+   +   +S   P    V     G  H   +TS G ++TWGSN +G 
Sbjct: 167 RN--HRGQLGDGSTVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGE 224

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
           LG G+     +P  V  P +              + G  H+ A++    +   W      
Sbjct: 225 LGDGTTIDRTTPILVGLPGTTV----------TTTAGGGHSFAVTSADTV-HAW------ 267

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
               G +S GQLG+GN+VD + P +V+         ++ G +H+
Sbjct: 268 ----GDNSDGQLGNGNNVDQLEPVVVSMPLGATVTAIAGGNDHS 307


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 158/345 (45%), Gaps = 41/345 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E   RP +  +    ++  +ACG  HT  +T TG +Y    G  + 
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  +V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
               K +  P +VE LSG+ T   A G   + A+                GK+ +WG G 
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             RLGHG + + L          P  +  L        A G   +  +  +G+V   G+ 
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
           AV   L    +  R P L+      E+V+   CG YH  VLT+  E++TWG   NG LG 
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGH 387

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
           G  +    P  V     E+  D+   ++  ++CG   TAAI + K
Sbjct: 388 GDTEDRKVPTLV-----EALKDR---AVRYIACGANFTAAICQYK 424



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 165/376 (43%), Gaps = 60/376 (15%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   + + G V+  G +  G+LG    E+    + P  +  L    V  ++ G  H
Sbjct: 84  CGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDC---VRPRLVESLTVSNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  +   G LG G      IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIP--KRISGALEGLQVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG        L+S S   PR ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGD-------LKSVS--YPREVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVV 294
            I E              G+++ +GD   DK     G+   R  P+ ++ L   +   V 
Sbjct: 250 AIVEVIVTRSSSSVKLSAGKLFTWGDG--DKHRLGHGDKETRLKPTCVATLIDHDFYRVA 307

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CG   T  LT+ G++ + G+   G LG       HS  R+     +  V +    ++ ++
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNP-----HSDGRIPCLVEDKIVGE---QVLQIA 359

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  H A ++   ++ TWG G +            G+LGHG+  D   PT+V   ++   
Sbjct: 360 CGSYHVAVLTNRSEVFTWGKGAN------------GRLGHGDTEDRKVPTLVEALKDRAV 407

Query: 414 LQVSCGFNHTGALLEY 429
             ++CG N T A+ +Y
Sbjct: 408 RYIACGANFTAAICQY 423



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 95/191 (49%), Gaps = 26/191 (13%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G  H+A + +NG V+ +G+ +  ++         RP L+  L  S  + V CG +HTC +
Sbjct: 85  GVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAV 144

Query: 304 TSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
           T+ GELYTWG  +   G LG G+ DV H  P+R+ G             +  VSCG  HT
Sbjct: 145 TTTGELYTWGDGTYNVGLLGHGN-DVGHWIPKRISGALEG-------LQVAYVSCGTWHT 196

Query: 361 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           A I S G++ T+G G            S G LGHG+     +P  V     +K + V+CG
Sbjct: 197 ALITSMGQLFTFGDG------------SFGVLGHGDLKSVSYPREVESLSGLKTIAVACG 244

Query: 420 FNHTGALLEYV 430
             HT A++E +
Sbjct: 245 VWHTAAIVEVI 255



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 18/124 (14%)

Query: 307 GELYTWGSNENGC---LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA-A 362
           G++Y WG  E  C   +  GS  V+ S  R+     +     +   +  V CG KH A  
Sbjct: 35  GDVYVWG--EVVCDTSVRTGSDTVISSTGRIDILLPKPLESNLVLDVYHVDCGVKHAALV 92

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           +  G++ TWG         ED   SGG+LGHG   D + P +V          V+CG  H
Sbjct: 93  MKNGEVFTWG---------ED---SGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFH 140

Query: 423 TGAL 426
           T A+
Sbjct: 141 TCAV 144


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A++ GG H + L+  G VY+ G  D G+LG    + Y    L    L  E+V I+ G HH
Sbjct: 18  AVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHH 77

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT  G LY WGK   G+LG G    ++   P  VE L        A G    Q++ V
Sbjct: 78  SAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCV 135

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T    V SWG G  G+LG G          S     P  I  L G+ V     G   S  
Sbjct: 136 TDDDNVWSWGDGDYGKLGRGG---------SDGCKVPLKIDSLAGLGVVKVECGSQFSVA 186

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           +  +G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE++
Sbjct: 187 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVF 246

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
           TWG N+ G LG G+   LH P  V     +         I  V+CG  HT A S  K
Sbjct: 247 TWGDNDEGQLGDGTTSALHRPRLVHALQGK--------KITRVACGSAHTLAWSTAK 295



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 44/321 (13%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           LE ++   +KK  V +S+G  H  A++ +G +Y WG+  +G+LG G K +     P  +E
Sbjct: 6   LESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLIE 61

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L G+     A G   S A+T  G + +WG G  GRLGHG          S  +  P+++
Sbjct: 62  DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---------SDDQLRPKVV 112

Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
           + L+  KV   A  +G   + C+ ++  V+ +GD    K+     +  + P  I  L   
Sbjct: 113 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 172

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQ 345
              +V CG   +  LT  G +YTWG  +   LG G+ D +  P +V   QG         
Sbjct: 173 GVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQG--------- 223

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
               I+ ++ G  H  A S+ G++ TW            G +  GQLG G       P +
Sbjct: 224 --KKIISIATGSLHCVACSDKGEVFTW------------GDNDEGQLGDGTTSALHRPRL 269

Query: 405 VNFGENVKALQVSCGFNHTGA 425
           V+  +  K  +V+CG  HT A
Sbjct: 270 VHALQGKKITRVACGSAHTLA 290



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  S  RP +        +  +ACGG H+  +T  G +Y  G   +G+
Sbjct: 38  WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 97

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG  ++    L P  +  L+  +V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 98  LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 156 -GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 212

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    PR +  L+G K+   A G LH     + G V+ +GD    ++     +   
Sbjct: 213 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 265

Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
           RP L+  L   +   V CG  HT
Sbjct: 266 RPRLVHALQGKKITRVACGSAHT 288



 Score = 44.7 bits (104), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 13/85 (15%)

Query: 343 VDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
           +  +    V VS G KH  A+S EG + +WG G              G+LGHGN V Y  
Sbjct: 9   IQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDD------------GKLGHGNKVSYDR 56

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P ++     V+ + ++CG +H+ A+
Sbjct: 57  PKLIEDLLGVEIVDIACGGHHSAAI 81



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 15/124 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG G+  +  RP +  A +   +  +ACG AHTL        ++T      +
Sbjct: 248 WGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL-------AWSTAKATQSR 300

Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +  S  + Y L + L  S L+  +V +    HH + +     L M+     G +GL K A
Sbjct: 301 MPASTPMEYDLVKDLSYSVLRNRLVLL----HHFAELLCPA-LAMF--PITGHIGLSKLA 353

Query: 162 AKVI 165
             ++
Sbjct: 354 PMLV 357


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 9/259 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 46  GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 106 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L      ++ G   
Sbjct: 166 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQL------ALSGNSA 218

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++     +    P 
Sbjct: 219 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQ 278

Query: 283 LISKL-PYSEEVVCGGYHT 300
           LI  +  +  ++ CG YHT
Sbjct: 279 LIEGIGGHVSQIECGSYHT 297



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 30/313 (9%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 24  LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 81

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 82  KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 140

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 141 LSEDGQVFSWGSNRQGQLGLGNNL--------CSQASPQKVKSLEGIPLAQVAAGGTHSF 192

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 193 ALSLMGTSFGWGNNRSGQLAL-SGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 251

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--I 363
            G+++T+G       G  S  + HSP   +G      ++ I   +  + CG  HT A   
Sbjct: 252 DGQVFTFG-------GSSSEQLQHSPRSGRG--GPQLIEGIGGHVSQIECGSYHTIAYVY 302

Query: 364 SEGKILTWGWGGS 376
           + G++++ G G S
Sbjct: 303 TTGQVVSLGRGPS 315



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 39/322 (12%)

Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           +P R+ +G   ++++ ++G  HS  +  +  +Y  G NS GQ  LG+K+ +    P  ++
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQ--LGQKSPQSTKRPEPIQ 68

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS +     + G E SVAV   G+V +WGAG  G+LG G+   I         + P  I
Sbjct: 69  ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPTKI 120

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKL 287
             L G+K+   + G  HS  + E+G+V+ +G     ++     L  + +  +  SL   +
Sbjct: 121 NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-EGI 179

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
           P + +V  GG H+  L+  G  + WG+N +G L +       + E++  P S   +  + 
Sbjct: 180 PLA-QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNS---AKEQIYKPHSIGALKTL- 234

Query: 348 TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
            ++V +SCG++HT+ ++E G++ T+G     G+ SE       QL H        P ++ 
Sbjct: 235 -NVVYISCGYEHTSVLTEDGQVFTFG-----GSSSE-------QLQHSPRSGRGGPQLIE 281

Query: 407 -FGENVKALQVSCGFNHTGALL 427
             G +V   Q+ CG  HT A +
Sbjct: 282 GIGGHVS--QIECGSYHTIAYV 301



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 97  WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 156

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 157 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 216

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S   G
Sbjct: 217 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 276

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+LI+ + G   +I    +   A +   G+V   G               R
Sbjct: 277 ---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG---------------R 312

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTS 305
            PS  S   + +E  C    TC+L++
Sbjct: 313 GPSCTSNATH-QEAACSDV-TCLLSA 336



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 31/266 (11%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 62

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 63  RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 122

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 123 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 181

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHP 402
            Q       V+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P
Sbjct: 182 AQ-------VAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKP 225

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
             +   + +  + +SCG+ HT  L E
Sbjct: 226 HSIGALKTLNVVYISCGYEHTSVLTE 251


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 154/314 (49%), Gaps = 31/314 (9%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G  +  ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           T  G+++T+G N  G LG       H P    +GP     V++I   +  + CG  HT A
Sbjct: 252 TQDGKVFTFGDNSYGQLG-------HDPTAEKRGP---QLVERIEGLVSQIDCGSDHTLA 301

Query: 363 --ISEGKILTWGWG 374
              + G+++++G G
Sbjct: 302 YIYTTGQVVSFGRG 315



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 38/310 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+   A
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            G  HS  + E+G+V+ +G  +  ++     F      +R   +  +P ++ V  GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L+  G  + WGSN  G L +   +   +P +   P S   +  +   +V +SCG+KHT
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTL--GVVSISCGYKHT 248

Query: 361 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVS 417
           A ++ +GK+ T+            G +S GQLGH    +   P +V   E ++ L  Q+ 
Sbjct: 249 AVLTQDGKVFTF------------GDNSYGQLGHDPTAEKRGPQLV---ERIEGLVSQID 293

Query: 418 CGFNHTGALL 427
           CG +HT A +
Sbjct: 294 CGSDHTLAYI 303



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N  G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G   + R  H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           SS +  L S         K+L  V+VK   AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 161/337 (47%), Gaps = 35/337 (10%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G     ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNNAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           T  G+++T+G N  G LG       H P    +GP     V++I   +  + CG  HT A
Sbjct: 252 TQDGKVFTFGDNSYGQLG-------HDPTAEKRGP---QLVERIEGLVSQIDCGSDHTLA 301

Query: 363 --ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
              + G+++++G G   G  S   H   G L   +D+
Sbjct: 302 YIYTTGQVVSFGRGP--GCASRSPHP--GALAESSDI 334



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 141/354 (39%), Gaps = 126/354 (35%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLHVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKII--- 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
                                                          +V CG YH+  L+
Sbjct: 132 -----------------------------------------------QVACGHYHSVALS 144

Query: 305 SGGELYTWGSNENGCLGIG-SIDVLHSPERVQG----PFSE------------------- 340
             G++++WG+N +G LG+G       SP+RV+     P ++                   
Sbjct: 145 EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFG 204

Query: 341 ---------------SPVDQI---------CTSIVLVSCGWKHTAAIS-EGKILTWGWGG 375
                          +PV +             +V +SCG+KHTA ++ +GK+ T+    
Sbjct: 205 WGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF---- 260

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGALL 427
                   G +S GQLGH    +   P +V   E ++ L  Q+ CG +HT A +
Sbjct: 261 --------GDNSYGQLGHDPTAEKRGPQLV---ERIEGLVSQIDCGSDHTLAYI 303



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 21/214 (9%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N+ G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG-----SGRLGHG 212
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G      S   G  
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAL 328

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
            ESS +  L S         K+L  V+VK   AG
Sbjct: 329 AESSDISCLVSA--------KDLADVQVKHIFAG 354


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 180/401 (44%), Gaps = 70/401 (17%)

Query: 43   WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-------GCVYA 94
            WG   +  LG G  + +   P +   F    +  +ACG  H+  L  +       G V+ 
Sbjct: 1018 WGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFT 1077

Query: 95   TGLNDFGQLG---------ISENIG-----------YSLEPLRIS-GLKKEVVQISTGYH 133
             GL + G+LG         +S+ IG           ++ +P+ +S GL+  +V I+ G +
Sbjct: 1078 FGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIACGAN 1137

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H+   TVDG +Y WG  + G LG G  A +  P+   V     IF  +   G   S+A+ 
Sbjct: 1138 HTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKV-VFPSDNIFISKCCAGSRHSMALD 1196

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G V SWG GG+GRLG G          + + YTP LI+  +  +V   + G  HSAC+
Sbjct: 1197 KEGNVWSWGYGGNGRLGLGS---------TRNYYTPNLIRIFDTYEVFQISCGDSHSACL 1247

Query: 254  DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            D  G VY +G     K+ L +  +    P+++  L  +   ++ CG  +T  L++ G++Y
Sbjct: 1248 DRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIY 1307

Query: 311  TWGS----NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-E 365
             WG     N+     I +ID           +   PV       V ++ G    AAI+  
Sbjct: 1308 QWGCTLGFNKQSEGLISNID-----------YVPQPVPDTGFKNVFIAAGPYSCAAINIF 1356

Query: 366  GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
            G +LTWG G            +G +LGHG+  D++ P  V+
Sbjct: 1357 GDLLTWGLG------------TGYRLGHGDSKDHVAPKFVS 1385



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 152/347 (43%), Gaps = 66/347 (19%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G  GRLGLGS  + + P +   F+ + +  ++CG +H+  L   G VY  G    G+
Sbjct: 1204 WGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRGGK 1263

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG+ + +   LEP  +  LK   ++QI+ G  ++ A++  G++Y WG      LG  K++
Sbjct: 1264 LGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWG----CTLGFNKQS 1319

Query: 162  AKVI------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
              +I      P P        +F    A G     A+   G +L+WG G   RLGHG   
Sbjct: 1320 EGLISNIDYVPQPVPDTGFKNVFI---AAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSK 1376

Query: 216  S-----ILGFLRSTSEYTPRLIK-------ELEG------------VKVKIAAAGFLHSA 251
                   +  LR T  Y   L+K       EL+              +++  A G  H  
Sbjct: 1377 DHVAPKFVSHLR-TRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGV 1435

Query: 252  CIDENGRVYIFG--------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
             +  NG VY +G              +   + MLF   NH    S ISK      + CG 
Sbjct: 1436 LLTCNGTVYTWGVNNGTGYNSTKDQIESYSEPMLF---NHFS--SKISK------IACGS 1484

Query: 298  YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
             H+  +T  G L+TWG N+NG LG G +     P+ V  P+ E+ ++
Sbjct: 1485 NHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHV--PYIENCIN 1529



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 159/374 (42%), Gaps = 61/374 (16%)

Query: 56   LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--------ISE 107
            +ES   P++ + F    +  +ACG  H+L +T  G ++  G ND GQLG        I +
Sbjct: 1461 IESYSEPMLFNHFSS-KISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPD 1519

Query: 108  NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
            ++ Y    + +         I +  H        G L+++G +S G+LGLG+     +  
Sbjct: 1520 HVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMT 1579

Query: 168  PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            P ++  ++G++  + ALG   SV +T  G + S GAG  GRLG G  S+   F    +E 
Sbjct: 1580 PREITTVTGVY--KLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTE- 1636

Query: 228  TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
                      VK     AG  HS  I  +  +Y +G+    K +  +  H   P+L+  +
Sbjct: 1637 ----------VKFVDVCAGSSHSLAISVDNELYGWGE---GKYICSDEKHVLEPTLMEVI 1683

Query: 288  PYSE------EVVCGGYHTCVLTSGGELYTWGSNENGCLGI------GSIDVLHSPERVQ 335
            P           V  G H+ VLT+ G +  +G+N  G LG+       + + +  P  V 
Sbjct: 1684 PSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVN 1743

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG- 394
                ++ V  I TS    SC      +  +G   +WG             SS  +LG G 
Sbjct: 1744 ---LDANVTCIATSRYFSSC------STLKGDAYSWGL------------SSDDRLGVGF 1782

Query: 395  --NDVDYIHPTIVN 406
              N V Y   TIVN
Sbjct: 1783 TNNKVVYAPTTIVN 1796



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 58/263 (22%)

Query: 198  VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---- 253
            V SWG      LG G + S       TSEY P++I    G K+   A G  HSA +    
Sbjct: 1015 VYSWGKVPFNCLGQGVDVS-------TSEY-PKIIPFFSGRKIAQVACGDYHSAVLVSSS 1066

Query: 254  ---DENGRVYIFG-----------DRAVDKMLFQEGNHAR-RPSLISKLPYSE------- 291
                  G V+ FG           D   D +  Q G   +  PS  +  P          
Sbjct: 1067 KQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLR 1126

Query: 292  ----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
                 + CG  HT V T  G +Y+WG    G LG GS+   ++P +V  P     + + C
Sbjct: 1127 NAIVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCC 1186

Query: 348  TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
                    G +H+ A+  EG + +WG+GG+            G+LG G+  +Y  P ++ 
Sbjct: 1187 -------AGSRHSMALDKEGNVWSWGYGGN------------GRLGLGSTRNYYTPNLIR 1227

Query: 407  FGENVKALQVSCGFNHTGALLEY 429
              +  +  Q+SCG +H+  L  +
Sbjct: 1228 IFDTYEVFQISCGDSHSACLDRF 1250



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 5/140 (3%)

Query: 43   WGNGDY-GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG G Y        LE     V+ S   +  + +    G H+L LT +G V A G N +G
Sbjct: 1661 WGEGKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYG 1720

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            QLG+  +I  S    ++      L   V  I+T  + SS  T+ G+ Y WG +S+ +LG+
Sbjct: 1721 QLGVQLSIKSSANNFIKMPSTVNLDANVTCIATSRYFSSCSTLKGDAYSWGLSSDDRLGV 1780

Query: 158  GKKAAKVIPIPTKVECLSGI 177
            G    KV+  PT +   S I
Sbjct: 1781 GFTNNKVVYAPTTIVNTSMI 1800


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 49/344 (14%)

Query: 43  WGNGDYG-----RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           WG G  G     R+GLG +E               L+  A G  H+L L   G V++ G 
Sbjct: 5   WGPGPRGPVSRRRVGLGGVE---------------LRQAASGERHSLLLLSNGQVHSCGD 49

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N  GQLG       S +  RI  L+   V  +S G  HS A+   G ++ WG  S GQLG
Sbjct: 50  NGRGQLG-QRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 157 LGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G+ K   +IP+  K++ L+ I  KQ + G   S+A++ GG+V SWG+   G+LG G+  
Sbjct: 109 TGEFKETNLIPM--KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGK-- 164

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 +  S+ +P+ ++ L+G+ +   AAG  HS  +  +G  + +G     ++   + 
Sbjct: 165 ------KFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKN 218

Query: 276 N---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           N    + +P  IS L       + CG  HT VLT  G+++T+G N  G LG         
Sbjct: 219 NVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG 278

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAA--ISEGKILTWG 372
           P+ V+G      +D + + I    CG  HT A   + GK++++G
Sbjct: 279 PQLVEG------IDGLVSQI---DCGSYHTLAYVYTTGKVVSFG 313



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 39/272 (14%)

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P+  +   L G+  +QAA G   S+ +   G+V S G  G G+LG           R   
Sbjct: 12  PVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKR--- 68

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPS 282
                 I+ LE + V + + G  HS  +   GRV+ +G  +  ++    F+E N    P 
Sbjct: 69  ------IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PM 120

Query: 283 LISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFS 339
            I  L     ++V CG YH+  L+ GG++++WGSN +G LG+G       SP+RV+    
Sbjct: 121 KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS--- 177

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV- 397
              +D I   +  V+ G  H+ A+S     ++GW          G ++ GQL  H N+V 
Sbjct: 178 ---LDGI--PLAQVAAGGAHSFALSLSGT-SFGW----------GRNNAGQLALHKNNVS 221

Query: 398 -DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                P  ++  +N+  + +SCG+ HT  L +
Sbjct: 222 GQSYKPYSISALKNLGVIYISCGYEHTVVLTQ 253


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 158/353 (44%), Gaps = 44/353 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-------SENIGYSLE 114
           P+         +  +A G  HT+ +   G VY+ G +  GQLG+       ++  GY  +
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 115 PL-RISGLKK--EVVQISTGYHHSSAITVDGELYMWGKN--------SNGQLGLGKKAAK 163
           P  RI  L +  +V+QI+ G  H+ A+T DG+LY WG              +   +    
Sbjct: 74  PTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCP 133

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
             P P  +  L  +  KQ A G   +VAV   G + SWGAG  G+LGH   SS   F   
Sbjct: 134 YQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSS---FPAD 190

Query: 224 TSEYT----PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              Y     PR +  L+  K+  A+ G +H+  + + G +Y FG  +  ++ F  GN ++
Sbjct: 191 EDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGF--GNISQ 248

Query: 280 RPSLISKLPYSE--------------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            P  +   P+                 + CG  H+  L+  G +Y WG    G LG+  I
Sbjct: 249 MPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDI 308

Query: 326 DVL--HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
             L  ++  +   PF +  V  +   IV +SCG  HT A++EG  L + +GG+
Sbjct: 309 RDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHL-YSFGGN 360



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 158/358 (44%), Gaps = 53/358 (14%)

Query: 110 GYSLEP--LRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK------- 159
           GY  +P  L I  L+ K + Q++ G  H+ A+ + G +Y WG ++ GQLGL         
Sbjct: 7   GYPFQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTD 66

Query: 160 -KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            +     P P  +E L  +   Q A G   +VA+T  GK+ SWG GG G+LGH   S++ 
Sbjct: 67  VEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMP 126

Query: 219 GFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                   +  P+LI  L+ ++VK  A G  H+  +  NG +Y +G  A  ++     + 
Sbjct: 127 KDEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQL--GHPDT 184

Query: 278 ARRPSLISKLPYSE--------------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           +  P+     PY                   CG  HT VLT  GE+Y +G    G LG G
Sbjct: 185 SSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFG 244

Query: 324 SIDVLHSPERVQG-PFSESPVDQICTS-----IVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           +I  +  P  V   PF   PV +   S     IV +SCG  H+ A+S EG +  WG    
Sbjct: 245 NISQM--PLDVDSCPF--MPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWG---- 296

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ------VSCGFNHTGALLE 428
             T+ + G      L    D     P    F + V AL       +SCG  HT AL E
Sbjct: 297 EATYGQLGLDDIRDLPKNTDNKPYQP----FPQKVVALMNKKIVAISCGETHTLALTE 350



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 49/324 (15%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WG    G+LGL S++           +  P +    +   +  +ACG AHT+ LT+ G +
Sbjct: 47  WGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKL 106

Query: 93  YA--------TGLNDFGQLGISEN-IGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDG 142
           Y+         G  D   +   E+   Y  +P  I  LK  EV Q++ G  H+ A+  +G
Sbjct: 107 YSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNG 166

Query: 143 ELYMWGKNSNGQLGLGKKAA--------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            LY WG  + GQLG    ++           PIP  V  L       A+ G   ++ +T 
Sbjct: 167 HLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTD 226

Query: 195 GGKVLSWGAGGSGRLGHGQESSI-LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G++  +G G  G+LG G  S + L          P+ I+ L+G+ +   + G  HS  +
Sbjct: 227 QGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMAL 286

Query: 254 DENGRVY-----IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV-----------CGG 297
              G VY      +G   +D +     N   +P      P+ ++VV           CG 
Sbjct: 287 SREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ----PFPQKVVALMNKKIVAISCGE 342

Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
            HT  LT GG LY++G N  G LG
Sbjct: 343 THTLALTEGGHLYSFGGNTCGQLG 366


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 158/347 (45%), Gaps = 55/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  ++
Sbjct: 356 WGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNY 415

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 416 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 474

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P +VE L G+ T +A+ G   + AV               GK+ +WG G  
Sbjct: 475 DR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 532

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  +E    ++A    L +  +  +G VY  G   
Sbjct: 533 GRLGHGDKEAKL---------VPTCVALVEHNFCQVACGHSL-TVALTTSGHVYAMGS-- 580

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLT   E+YTWG   
Sbjct: 581 --PVYGQLGN----PQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGA 634

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG G  D  ++P  V     ++  D+   SI   +CG   TAAI
Sbjct: 635 NGRLGHGDTDDRNNPTLV-----DALKDKHVKSI---ACGTNFTAAI 673



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 181/376 (48%), Gaps = 58/376 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 334 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDALSNTNIELVA 390

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 391 CGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSYISCGP 448

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   A+ G
Sbjct: 449 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTMRASCG 499

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE- 291
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ + ++  
Sbjct: 500 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVALVEHNFC 557

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V CG   T  LT+ G +Y  GS   G LG    D    P RV+G   +S V++I     
Sbjct: 558 QVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADG-KLPTRVEGKLLKSFVEEI----- 611

Query: 352 LVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
             +CG  H A ++   ++ TWG G +            G+LGHG+  D  +PT+V+  ++
Sbjct: 612 --ACGAYHVAVLTLRNEVYTWGKGAN------------GRLGHGDTDDRNNPTLVDALKD 657

Query: 411 VKALQVSCGFNHTGAL 426
                ++CG N T A+
Sbjct: 658 KHVKSIACGTNFTAAI 673



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 128/289 (44%), Gaps = 50/289 (17%)

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           GLG K   + P    +E    +  +  A G   +  VT  G++ SWG    GRLGHG +S
Sbjct: 313 GLGVKIDSLFP--KALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDS 370

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
            +L          P+LI  L    +++ A G  H+  +  +G +Y +G+ A +  L   G
Sbjct: 371 DVL---------HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHG 421

Query: 276 NHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           N      P  ++   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  
Sbjct: 422 NQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSL 481

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-------------GKILTWGWGGSH 377
           P  V+       +  + T  +  SCG  HTAA+ E             GK+ TWG G   
Sbjct: 482 PREVES------LKGLRT--MRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK- 532

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                      G+LGHG+    + PT V   E+    QV+CG + T AL
Sbjct: 533 -----------GRLGHGDKEAKLVPTCVALVEH-NFCQVACGHSLTVAL 569



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 24/207 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG+     G LG G+      P+RV GP       
Sbjct: 383 NTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLE----- 437

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
                +  +SCG  HTA + S G++ T+G     GTF        G LGHG+      P 
Sbjct: 438 --GIHVSYISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGDRKSVSLPR 483

Query: 404 IVNFGENVKALQVSCGFNHTGALLEYV 430
            V   + ++ ++ SCG  HT A++E +
Sbjct: 484 EVESLKGLRTMRASCGVWHTAAVVEVM 510


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 186/414 (44%), Gaps = 44/414 (10%)

Query: 33  STLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           + L R  A L WG+G+ G+LG+G  + +      +A + +++ A+  G  ++L + + G 
Sbjct: 2   APLPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGR 61

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
           ++  G N  G LG          P  +  L   ++VQ + G  H  A+   G  Y WG N
Sbjct: 62  LFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGN 121

Query: 151 SNGQLGL-------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
             GQ G        G +A +   IPT   C   +  +Q A G   SV +T  G V +WG 
Sbjct: 122 EYGQCGEEPERKEDGTRALRRD-IPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWG- 179

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     +    G ++  S  TP  ++ LE  KV + A G  H+  + E+  ++ +G
Sbjct: 180 ----------QPWPPGDIKQIS--TPVRVQGLE--KVMMIAVGAFHNLALSEDAVLWAWG 225

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +    ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLG 285

Query: 322 IGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGT 379
            G     H  P +VQ    E         IV VSCG  H+ A+ S+G+I ++G  G HG 
Sbjct: 286 FGDDKSSHMVPLKVQLLDGE--------DIVQVSCGGTHSVALTSDGRIFSYG-RGDHGR 336

Query: 380 FSEDGHSSGGQLGHGNDVDY-IHPTIVNFGEN--VKALQVSCGFNHTGALLEYV 430
               G+      GH  +V   + P   + G +   +A  V+CG  HT A++ + 
Sbjct: 337 L---GYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAIVTWT 387


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 154/314 (49%), Gaps = 31/314 (9%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G  +  ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           T  G+++T+G N  G LG       H P    +GP     V++I   +  + CG  HT A
Sbjct: 252 TQDGKVFTFGDNSYGQLG-------HDPTAEKRGP---QLVERIEGLVSQIDCGSDHTLA 301

Query: 363 --ISEGKILTWGWG 374
              + G+++++G G
Sbjct: 302 YIYTTGQVVSFGRG 315



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 38/310 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+   A
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            G  HS  + E+G+V+ +G  +  ++     F      +R   +  +P ++ V  GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L+  G  + WGSN  G L +   +   +P +   P S   +  +   +V +SCG+KHT
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTL--GVVSISCGYKHT 248

Query: 361 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVS 417
           A ++ +GK+ T+            G +S GQLGH    +   P +V   E ++ L  Q+ 
Sbjct: 249 AVLTQDGKVFTF------------GDNSYGQLGHDPTAEKRGPQLV---ERIEGLVSQID 293

Query: 418 CGFNHTGALL 427
           CG +HT A +
Sbjct: 294 CGSDHTLAYI 303



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N  G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G   + R  H G E
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           SS +  L S         K+L  V+VK   AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352


>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
           musculus]
 gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
          Length = 557

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +         IK+L        +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVFFTPADTIKQL--------SAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 265 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 307

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 308 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 175/372 (47%), Gaps = 43/372 (11%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV-----LVSCG 356
           ++T  G LYT+G   +G LG+G  +           F+      +C++ +     L++CG
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLGMEN-----------FTNQFFPTLCSNFLRFAVQLIACG 395

Query: 357 WKHTAAISEGKI 368
             H    +  ++
Sbjct: 396 GCHMLVFATPRL 407



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 351

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 352 GLLYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 38/252 (15%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
            G  H+    + G VY  G     ++ L    +      ++   P    +++  G   + 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H+A
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYHSA 241

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSC 418
            ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV+C
Sbjct: 242 FVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVAC 288

Query: 419 GFNHTGALLEYV 430
           G  HT  L E V
Sbjct: 289 GGGHTVVLTEKV 300



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 41/208 (19%)

Query: 230 RLIKELEGVKVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           R+   +   + +I  AGF      + + + G V+ FG     K  F E       ++ SK
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSK 67

Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +  ++     CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E  
Sbjct: 68  FWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPE-- 125

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYI 400
                  + L +CG  HT       +++   GG +      G ++ GQLG G  +D D  
Sbjct: 126 ------KVKLAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTF 168

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLE 428
           H  IV F       Q+S G N + AL E
Sbjct: 169 H-QIVFFTPADTIKQLSAGANTSAALTE 195


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 154/314 (49%), Gaps = 31/314 (9%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G  +  ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           T  G+++T+G N  G LG       H P    +GP     V++I   +  + CG  HT A
Sbjct: 252 TQDGKVFTFGDNSYGQLG-------HDPTAEKRGP---QLVERIEGLVSQIDCGSDHTLA 301

Query: 363 --ISEGKILTWGWG 374
              + G+++++G G
Sbjct: 302 YIYTTGQVVSFGRG 315



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 38/310 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+   A
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            G  HS  + E+G+V+ +G  +  ++     F      +R   +  +P ++ V  GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L+  G  + WGSN  G L +   +   +P +   P S   +  +   +V +SCG+KHT
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTL--GVVSISCGYKHT 248

Query: 361 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVS 417
           A ++ +GK+ T+            G +S GQLGH    +   P +V   E ++ L  Q+ 
Sbjct: 249 AVLTQDGKVFTF------------GDNSYGQLGHDPTAEKRGPQLV---ERIEGLVSQID 293

Query: 418 CGFNHTGALL 427
           CG +HT A +
Sbjct: 294 CGSDHTLAYI 303



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N  G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G   + R  H G E
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           SS +  L S         K+L  V+VK   AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D I  +I  +S G  H    TA   + +++ W
Sbjct: 713 SG------LDGI--AIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQIC----TSIVLVS--------------CGWK 358
           LG G  + ++ P   E +QG F    + ++C    +S+ L S              CG  
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 359 HTAA--------ISEGKILTWGWGGSHG-TFSED------GHSSGGQLGHGNDVDYI-HP 402
              A        ++  +I+    G SH  + S D      G++S GQ G GN    I  P
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 403 TIVNFGENVKALQVSCGFNHTGA 425
             V+  + +   Q+S G +H+ A
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLA 732



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G     G  + +++   
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 654

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                   P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 655 -------RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 56/362 (15%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQISTGYHHSSA-- 137
           C  A  +     LG S +     EP R S            L +EV ++++ Y  + A  
Sbjct: 298 CFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASP 357

Query: 138 ----------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
                     ++   E+Y+WG NS+ QL  G +  + I  P      S   T +A  G  
Sbjct: 358 DSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQY 413

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  ++  G V + G G  GRLG G +S+    L+  +    R IK     KV  +    
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEPHRSIK-----KVSSSKGSD 467

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLT 304
            H+      G V+ +GD    K+     +  + P LI      + VVC   GY H+  +T
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             GELYTWG  + G LG G  +  + P  V+            +++  VSCG  HT A+S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD----------ISNVGEVSCGSSHTIALS 577

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +     W +GG             G+LGHG+      P ++   + +   +V  G   + 
Sbjct: 578 KDGRTVWSFGGG----------DNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 425 AL 426
           AL
Sbjct: 628 AL 629



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G    G LG+G  +   + +++      S + ++ +S         HT A  +EG++ +W
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSS----KGSDGHTLAFTTEGEVFSW 482

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           G G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 483 GDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
           boliviensis boliviensis]
          Length = 1170

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 33/293 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYATG ND G
Sbjct: 58  VFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEG 117

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL 
Sbjct: 118 QLGLGDTEERTTFHL--ISFFTPQHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLP 175

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                 +P     +  +G      + G+  S  VT  G++  +G   +G+LG       L
Sbjct: 176 DMPNACVPH----QVTTGKPVSWISCGYYHSAFVTTDGELYIFGEPENGKLG-------L 224

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI----FGDRAVDKMLFQE 274
            +   ++   P+L+ E+    +++A  G  HS  + EN         FG   +   LF+ 
Sbjct: 225 PYELLSNHRIPQLVPEIPEKVIQVACGG-EHSVVLTENDLYTFGLGKFGQLGLGTFLFE- 282

Query: 275 GNHARRPSLIS-----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
                 P ++      K+ Y   + CG  H  +LT  G +YT+G   +G LG+
Sbjct: 283 ---TSEPRVVESIKGRKISY---ISCGENHAALLTDTGLMYTFGDGRHGKLGL 329



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 163/345 (47%), Gaps = 40/345 (11%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + ++G V+      FG+   +EN      P +        V +S G  HS+ +T + +L
Sbjct: 7   LMPDSGAVFV-----FGKSKFTENT-----PGKFWFKNDVAVHLSCGDEHSAVVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y++G N+ GQLGLG K+A  +  PT V+ L     K AA G   ++  T GG V + G  
Sbjct: 57  YVFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGN 114

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F    S +TP+        K+K  +AG   SA + E+GR++++GD
Sbjct: 115 DEGQLGLGDTEERTTF-HLISFFTPQH-------KIKQLSAGSNTSAALTEDGRLFMWGD 166

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++   +  +A  P  ++       + CG YH+  +T+ GELY +G  ENG LG+  
Sbjct: 167 NSEGQIGLPDMPNACVPHQVTTGKPVSWISCGYYHSAFVTTDGELYIFGEPENGKLGLPY 226

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
              L S  R+        V +I   ++ V+CG +H+  ++E  + T+G G          
Sbjct: 227 --ELLSNHRIP-----QLVPEIPEKVIQVACGGEHSVVLTENDLYTFGLG---------- 269

Query: 385 HSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               GQLG G  + +   P +V   +  K   +SCG NH   L +
Sbjct: 270 --KFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTD 312



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 147/315 (46%), Gaps = 37/315 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N  GQLGLG    +     T    +S  FT     KQ + G   S
Sbjct: 99  TLVSTEGGNVYATGGNDEGQLGLGDTEER-----TTFHLIS-FFTPQHKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G     +     + T+           G  V   + G+ H
Sbjct: 153 AALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTT-----------GKPVSWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           SA +  +G +YIFG+    K  + ++  ++ R P L+ ++P    +V CGG H+ VLT  
Sbjct: 202 SAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTE- 260

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE 365
            +LYT+G  + G LG+G+     S  RV        V+ I    I  +SCG  H A +++
Sbjct: 261 NDLYTFGLGKFGQLGLGTFLFETSEPRV--------VESIKGRKISYISCGENHAALLTD 312

Query: 366 GKILTWGWGGSHGTF 380
             ++     G HG  
Sbjct: 313 TGLMYTFGDGRHGKL 327


>gi|147920282|ref|YP_685948.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
 gi|110621344|emb|CAJ36622.1| predicted regulator of chromosome condensation [Methanocella
           arvoryzae MRE50]
          Length = 451

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 13/285 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ +YG+LG G+     + V      +  + A++ G  H L L   G V+A G N FGQ+
Sbjct: 100 GDNEYGQLGDGTRVDSSKAVQVQCLSE--VVAISAGDCHNLALKRDGTVWAWGCNLFGQI 157

Query: 104 GISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G ++N+G+  L P+++ GL   V +IS GY  S AIT DG ++ WG N  GQ+G G K  
Sbjct: 158 G-NDNVGHDELTPVQVPGLSG-VKEISAGYMGSKAITGDGTVWAWGINEYGQIGDGTKEI 215

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+   +  +S I T +    +  S+A+   G V +WG  G G+LG   E ++   L 
Sbjct: 216 RSLPVRISINNVSAIDTGE----YGTSIALKSDGSVWTWGNNGQGQLGDPAEDTLSMMLP 271

Query: 223 STSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNHA 278
            ++  + RL+    G    V   +AG  +S  + ++G ++++G+    +     + G  +
Sbjct: 272 VSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGENQEGRFGNGLKFGRDS 331

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            RP ++  L     V  G  +   L+  G +Y WG N  G +G G
Sbjct: 332 IRPVIVPGLNNIVSVKAGASYMLALSDDGTVYGWGKNIFGAVGNG 376



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 19/186 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT-LFLTETGCVYATGLNDFG 101
           WG  +YG++G G+ E R  PV  S    +++ A+  G   T + L   G V+  G N  G
Sbjct: 200 WGINEYGQIGDGTKEIRSLPVRISI---NNVSAIDTGEYGTSIALKSDGSVWTWGNNGQG 256

Query: 102 QLGISENIGYSLEPLRISGLKKE------------VVQISTGYHHSSAITVDGELYMWGK 149
           QLG       S+  L +S L  E            V  +S G  +S A+  DG L++WG+
Sbjct: 257 QLGDPAEDTLSMM-LPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGE 315

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N  G+ G G K  +    P  V  L+ I + +A  G    +A++  G V  WG    G +
Sbjct: 316 NQEGRFGNGLKFGRDSIRPVIVPGLNNIVSVKA--GASYMLALSDDGTVYGWGKNIFGAV 373

Query: 210 GHGQES 215
           G+G+ S
Sbjct: 374 GNGERS 379



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 13/135 (9%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEK---------HSLKALACGGAHTLFLTETGC 91
           WGN   G+LG  + +  S   PV     E+         +++ +++ G  ++L + + G 
Sbjct: 250 WGNNGQGQLGDPAEDTLSMMLPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGT 309

Query: 92  VYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           ++  G N  G+ G     G  S+ P+ + GL   +V +  G  +  A++ DG +Y WGKN
Sbjct: 310 LWVWGENQEGRFGNGLKFGRDSIRPVIVPGLNN-IVSVKAGASYMLALSDDGTVYGWGKN 368

Query: 151 SNGQLGLGKKAAKVI 165
             G +G G+++  V+
Sbjct: 369 IFGAVGNGERSETVV 383


>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
          Length = 245

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 15/237 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 34/255 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   + G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIG-SIDVLHSPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
           G+G       SP+ ++     PF +            V+ G  H+  ++  G I  WG  
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWGRN 217

Query: 375 --GSHGTFSEDGHSS 387
             G  G   E+G  S
Sbjct: 218 KFGQLGLNDENGRFS 232



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G ++  G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 102 QLGIS-ENIGYSLE 114
           QLG++ EN  +SLE
Sbjct: 221 QLGLNDENGRFSLE 234


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 24/290 (8%)

Query: 44   GNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLN 98
            G G YGRLG G+ +   R RP+  +A +   +  LA       H+L LTETG V++ G  
Sbjct: 3462 GEGSYGRLGQGNSDDLPRLRPI--TALQGFVVTELATSTGLEGHSLALTETGEVFSWGDG 3519

Query: 99   DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            D+G+LG   N      P +I  L+ ++V+ ++ G+ HS+ +TVDG+L+ +G +  G+LGL
Sbjct: 3520 DYGKLG-HGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGL 3578

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
            G  + K   +P +V  L  I  +  A G   +V VT   + V ++G G  G+LG G    
Sbjct: 3579 GNTSNK--KLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG---- 3632

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 R+T++ TP+ +     + +K    G   +  + + G+VY  G    + +   +  
Sbjct: 3633 -----RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQ 3687

Query: 277  HARR-PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            HA   P  +  L   + E++  G  H   LT  G++++WG++ +G LG+G
Sbjct: 3688 HADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLG 3737



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 180/399 (45%), Gaps = 52/399 (13%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            A  WG G +G+L   S     +P + S+F K   K + CG   T  +   G V A G   
Sbjct: 3409 AYTWGGGRHGQLA-ESGRLVLQPTLTSSFSKA--KQIHCGHNSTFVIEHDGTVLACGEGS 3465

Query: 100  FGQLGISENIGYSLEPLR-ISGLKKEVVQ---ISTGYH-HSSAITVDGELYMWGKNSNGQ 154
            +G+LG  +     L  LR I+ L+  VV     STG   HS A+T  GE++ WG    G+
Sbjct: 3466 YGRLG--QGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGK 3523

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G    +    P ++E L G      A G + S  VT  GK+ ++GA   GRLG G  
Sbjct: 3524 LGHGNSERQ--RRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNT 3581

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
            S+         +  P  +  L+ + V++ A G  H+  +  +   V+ FG+    ++   
Sbjct: 3582 SN---------KKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG 3632

Query: 274  EGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                   P  +   SKL   +++ CG   T  LT  G++Y+ G N   C GI  +D  H+
Sbjct: 3633 RTTAKMTPQYVDAFSKLNI-KKICCGARFTLALTKEGKVYSCGHNR--CNGIFEVDTQHA 3689

Query: 331  ---PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 386
               P++V    SE  ++ I       + G++H  A++ EG +  W WG          + 
Sbjct: 3690 DYYPQQVMA-LSEQFIEDI-------AAGYEHALALTKEGDV--WSWG----------ND 3729

Query: 387  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            + GQLG G  +    P +++  +     Q+S G NH+ A
Sbjct: 3730 TDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAA 3768



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 31/291 (10%)

Query: 46  GDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDFGQ 102
           G+YGRLGLG   ++ RP +     +  +K L        HTL +   G +Y+ G  D+G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   ++      L +  ++ +VV QI+ GY HS+AIT +G LY WG    G+LG G   
Sbjct: 501 LGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNH 560

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           ++   IPT V+ ++G+ +      F   ++      V S+GAG +G+LGHG  S +    
Sbjct: 561 SR--SIPTLVKDITGVGSVSCGSSFTVVIS-QDATTVWSFGAGDNGKLGHGDTSRV---- 613

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI--------FGDRAVDKMLFQ 273
                Y P++I  L+G+ ++        S  +   G+V++        +G      ++ +
Sbjct: 614 -----YRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLVPK 668

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             +  +   +I       ++  G  H   LT   ++Y+WG+N +G  G+G+
Sbjct: 669 RLDEFQDLQII-------DIAVGDNHCLALTCDNDVYSWGNNASGQCGLGN 712



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 143/332 (43%), Gaps = 42/332 (12%)

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QL  S      L P ++  + +E+++  T       ++   E Y WG   +GQL    ++
Sbjct: 3368 QLITSTKENEILPPWKL-AMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLA---ES 3423

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +++  PT     S    KQ   G   +  +   G VL+ G G  GRLG G         
Sbjct: 3424 GRLVLQPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGN-------- 3473

Query: 222  RSTSEYTPRL--IKELEG-VKVKIAAAGFL--HSACIDENGRVYIFGDRAVDKMLFQEGN 276
               S+  PRL  I  L+G V  ++A +  L  HS  + E G V+ +GD    K+      
Sbjct: 3474 ---SDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSE 3530

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RRP  I  L   +   V CG  H+ ++T  G+L+T+G+++ G LG+G+      P +V
Sbjct: 3531 RQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQV 3590

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                   P+      + L++CG  HT  ++  +   W +G   G +        GQLG G
Sbjct: 3591 TA---LQPI-----MVELIACGANHTVVVTTDRESVWTFG--EGEY--------GQLGLG 3632

Query: 395  NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 + P  V+    +   ++ CG   T AL
Sbjct: 3633 RTTAKMTPQYVDAFSKLNIKKICCGARFTLAL 3664



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 34   TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
            T  R     +G G+YG+LGLG   ++  P    AF K ++K + CG   TL LT+ G VY
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVY 3671

Query: 94   ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
            + G N    +   +       P ++  L ++ ++ I+ GY H+ A+T +G+++ WG +++
Sbjct: 3672 SCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTD 3731

Query: 153  GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            GQLGLG+   +    P  +  L G   +Q + G   S A T     +      S  L  G
Sbjct: 3732 GQLGLGQTLPQ--REPCLISSLQGKGIRQISAGHNHSAAWTVAPASIRKAMATSSSLELG 3789

Query: 213  QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
                         E  P +   L G+ +++
Sbjct: 3790 -----------LPERIPEIYGSLAGIDIQL 3808



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 143/323 (44%), Gaps = 72/323 (22%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIF-----------TKQAALGFE 187
           +  +Y+WG NS+ QLG+ +    +IP   P+      G +            +   + FE
Sbjct: 404 ESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRFE 463

Query: 188 Q----------------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
                            ++A+   G++ SWG G  G+LGHG            ++ +P+L
Sbjct: 464 HECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNH---------VTQKSPKL 514

Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPY 289
           I   ++G  V+  A G+ HSA I   G +Y +GD    + L    NH+R  P+L+  +  
Sbjct: 515 ILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGR-LGHGDNHSRSIPTLVKDITG 573

Query: 290 SEEVVCGGYHTCVLTSGG-ELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQ 345
              V CG   T V++     ++++G+ +NG LG G    ++ P+    +QG      + +
Sbjct: 574 VGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLL----IRK 629

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPT 403
           +C       C  + + A++  G++  WG              SG  LG+G  D  ++ P 
Sbjct: 630 VC-------CASQSSLALTSIGQVFVWG--------------SGPCLGYGQADATFLVPK 668

Query: 404 IVNFGENVKALQVSCGFNHTGAL 426
            ++  ++++ + ++ G NH  AL
Sbjct: 669 RLDEFQDLQIIDIAVGDNHCLAL 691



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 22/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   ++ +A G  H+  +T  G +Y  G  D+G
Sbjct: 493 WGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYG 552

Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
           +LG  +N   S     I  L K++     +S G   +  I+ D   ++ +G   NG+LG 
Sbjct: 553 RLGHGDNHSRS-----IPTLVKDITGVGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGH 607

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G  +   +  P  +  L G+  ++     + S+A+T  G+V  WG+G    LG+GQ  + 
Sbjct: 608 GDTSR--VYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC--LGYGQADA- 662

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
             FL       P+ + E + +++   A G  H   +  +  VY +G+ A
Sbjct: 663 -TFL------VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNA 704



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V S  +   ++ + C    +L LT  G V+  G      
Sbjct: 597 FGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC-- 654

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +     L P R+   +  +++ I+ G +H  A+T D ++Y WG N++GQ GLG   
Sbjct: 655 LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNN 714

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           + V+ +P KV         Q ++G   S+A T 
Sbjct: 715 SPVL-LPRKVTGFDNHVIYQISVGTSHSIAWTA 746



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 9/214 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG+GDYGRLG G   SR  P +        + +++CG + T+ +++    V++ G  D G
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQDATTVWSFGAGDNG 603

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +       P  IS L+  ++ ++      S A+T  G++++WG  S   LG G+ 
Sbjct: 604 KLGHGDT-SRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWG--SGPCLGYGQA 660

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  + +P +++    +     A+G    +A+T    V SWG   SG+ G G  +S +  
Sbjct: 661 DATFL-VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLL 719

Query: 221 LRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
            R  + +   +I ++  G    IA        CI
Sbjct: 720 PRKVTGFDNHVIYQISVGTSHSIAWTALPTDRCI 753



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 4/142 (2%)

Query: 2    LGRSLTAMTKYYLKQDIKLGSKLGIC--KRWISSTLQRRFAALWGNGDYGRLGLGSLESR 59
            LGR+   MT  Y+    KL  K   C  +  ++ T + +  +   N   G   + +  + 
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHAD 3690

Query: 60   WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
            + P    A  +  ++ +A G  H L LT+ G V++ G +  GQLG+ + +    EP  IS
Sbjct: 3691 YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQR-EPCLIS 3749

Query: 120  GLK-KEVVQISTGYHHSSAITV 140
             L+ K + QIS G++HS+A TV
Sbjct: 3750 SLQGKGIRQISAGHNHSAAWTV 3771


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 180/394 (45%), Gaps = 72/394 (18%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 1177 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1236

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQI-----------------------STGYHHSS 136
            G+LG   N      P +I  L+ +EVVQ+                       S G+ HS+
Sbjct: 1237 GKLG-HGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSA 1295

Query: 137  AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVT 193
             +T DG+L+ +G    G+LGLG  + K   +P +V  L G    Q    A G   ++ V+
Sbjct: 1296 VVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVAALEGYQIGQVANVACGLNHTLVVS 1353

Query: 194  GGGKVL-SWGAGGSGRLGHGQESSILGFLRSTSEY------TPRLIKELE-----GVKVK 241
              G ++ ++G G  G+LG G  ++     +S+ +       +P L +EL+     G+ +K
Sbjct: 1354 ADGMMVWAFGDGDYGKLGLGNSTA-----KSSPQVWAVILQSPTLCQELKVDVLCGISIK 1408

Query: 242  IAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
              A G   S  + ++GRV+ FG DR +     +  NH  RP  +  L   + ++V  G  
Sbjct: 1409 KVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNH-NRPQQLPALSGVHVQDVAVGAE 1467

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            HT  L+S G++Y WGSN  G LG+G  + +  P                 ++V +  G K
Sbjct: 1468 HTLALSSTGDVYAWGSNSEGQLGLGHTNHVREP-----------------TVVTMLQG-K 1509

Query: 359  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
            H   +S G+  +  W          G S   QLG
Sbjct: 1510 HIHQVSAGRCHSAAWTAPSLPPRAPGSSVPLQLG 1543



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 53/306 (17%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFE-----------------------KHSLKALACG 79
            WG+GDYG+LG G+ + + RP    A +                        H    ++CG
Sbjct: 1231 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCG 1290

Query: 80   GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK----EVVQISTGYHHS 135
              H+  +T  G ++  G  D+G+LG+       L P R++ L+     +V  ++ G +H+
Sbjct: 1291 FKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGQVANVACGLNHT 1349

Query: 136  SAITVDGEL-YMWGKNSNGQLGLGKKAAKVIP--------IPT-----KVECLSGIFTKQ 181
              ++ DG + + +G    G+LGLG   AK  P         PT     KV+ L GI  K+
Sbjct: 1350 LVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKK 1409

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             A G + SVA+T  G+V ++G     RL    ES      R+ +   P+ +  L GV V+
Sbjct: 1410 VACGTQFSVALTKDGRVFTFG---QDRLIGLPES------RARNHNRPQQLPALSGVHVQ 1460

Query: 242  IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYH 299
              A G  H+  +   G VY +G  +  ++     NH R P++++ L   +  +V  G  H
Sbjct: 1461 DVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIHQVSAGRCH 1520

Query: 300  TCVLTS 305
            +   T+
Sbjct: 1521 SAAWTA 1526



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 131/315 (41%), Gaps = 59/315 (18%)

Query: 119  SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            SGL ++++  +T       +    ++++WG   +GQL    +A + I +PT     S   
Sbjct: 1099 SGLDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTTAPSFSQ-- 1153

Query: 179  TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
             +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G 
Sbjct: 1154 AQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQGF 1204

Query: 239  KVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
             V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV 
Sbjct: 1205 VVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQ 1263

Query: 295  -------------------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                                     CG  H+ V+T+ G+L+T+G+ + G LG+G+     
Sbjct: 1264 VGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK 1323

Query: 330  SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 389
             PERV        + Q+      V+CG  HT  +S   ++ W +G        DG    G
Sbjct: 1324 LPERVAA-LEGYQIGQVAN----VACGLNHTLVVSADGMMVWAFG--------DGDY--G 1368

Query: 390  QLGHGNDVDYIHPTI 404
            +LG GN      P +
Sbjct: 1369 KLGLGNSTAKSSPQV 1383



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 157/379 (41%), Gaps = 91/379 (24%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
            Q+  G + +  I  +G +   G+ S G+LG G   +  + + T +  L G    Q   + 
Sbjct: 1156 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 1213

Query: 185  GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV--- 240
            G +  S+A+T  G+V SWG G  G+LGHG          S  +  PR I+ L+G +V   
Sbjct: 1214 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQV 1264

Query: 241  ---KIAAAG-----------------FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               + A AG                 F HSA +  +G+++ FG+    ++     ++ + 
Sbjct: 1265 GRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 1324

Query: 281  PSLISKLP-----YSEEVVCGGYHTCVLTSGGEL-YTWGSNENGCLGIGSIDVLHSPER- 333
            P  ++ L          V CG  HT V+++ G + + +G  + G LG+G+     SP+  
Sbjct: 1325 PERVAALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVW 1384

Query: 334  ---VQGPF--SESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGW------------- 373
               +Q P    E  VD +C  SI  V+CG + + A++ +G++ T+G              
Sbjct: 1385 AVILQSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARN 1444

Query: 374  --------------------GGSH-------GTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
                                G  H       G     G +S GQLG G+      PT+V 
Sbjct: 1445 HNRPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVT 1504

Query: 407  FGENVKALQVSCGFNHTGA 425
              +     QVS G  H+ A
Sbjct: 1505 MLQGKHIHQVSAGRCHSAA 1523



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 43/181 (23%)

Query: 271  LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            L + G +   P+       +++VVCG   T V+   G +   G    G LG G+ D LH 
Sbjct: 1135 LAEAGRNILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV 1194

Query: 331  PERVQGPFSESPVDQICTSIVLVSCGWK-HTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
               +      S +     + ++ SCG   H+ A++E G++ +WG G              
Sbjct: 1195 LTVI------SALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY------------ 1236

Query: 389  GQLGHGNDVDYIHPT---------IVNFGENVKA--------------LQVSCGFNHTGA 425
            G+LGHGN      P          +V  G    A              LQ+SCGF H+  
Sbjct: 1237 GKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAV 1296

Query: 426  L 426
            +
Sbjct: 1297 V 1297


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 152/330 (46%), Gaps = 35/330 (10%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      + V IS G  H++ +T +G+LYM+G N  GQLGLG 
Sbjct: 21  FGKSNFAENI-----PSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 75

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    +  PT V+ L    TK A  G   ++  T  G V + G    G+LG G       
Sbjct: 76  K--NTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTT 133

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F    S +T +        K+K  AAG   SA + E+G+++++GD +  ++   +     
Sbjct: 134 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVS 185

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +        + CG YH+  +T  GELYT+G  ENG LG+        PE+++    
Sbjct: 186 VPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGL-------LPEQLKNSRV 238

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             PV  I   +  V+CG +HT  ++E  + T+G G              GQLGHG  +  
Sbjct: 239 PQPVLGIMEKVNKVACGGEHTVVLTETGVYTFGLG------------QYGQLGHGTLLFK 286

Query: 400 IH-PTIVNFGENVKALQVSCGFNHTGALLE 428
              P  V    + K   V+CG +HT  + E
Sbjct: 287 TSVPKSVKHLRSHKIHNVTCGESHTAVIAE 316



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 154/328 (46%), Gaps = 35/328 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLGS  +  +P    A +    K   CG  HTL  TE G VYA G N  G
Sbjct: 62  MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 121

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL 
Sbjct: 122 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 179

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K    +P    V    G      + G+  S  +TG G++ ++G   +G+LG   E    
Sbjct: 180 DKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 232

Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIF-----GDRAVDKMLF 272
             L+++    P L I E    KV   A G  H+  + E G VY F     G      +LF
Sbjct: 233 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 285

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           +         L S   ++  V CG  HT V+   G ++T+G   +G LG+G        E
Sbjct: 286 KTSVPKSVKHLRSHKIHN--VTCGESHTAVIAENGLMFTFGDGRHGKLGLGE-------E 336

Query: 333 RVQGPFSESPVDQICT-SIVLVSCGWKH 359
                F  +      + +++LV+CG  H
Sbjct: 337 NFANQFDPALCSNFLSFTVLLVACGGCH 364



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 167/359 (46%), Gaps = 50/359 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
           ++CG  HT  +T  G +Y  G ND+GQLG+ S+N     +P  +  LK E  +++  G +
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNT--VRKPTCVKALKPEKTKLAVCGRN 101

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
           H+   T  G +Y  G NS GQLGLG    +     T    +S  FT     KQ A G   
Sbjct: 102 HTLVYTEKGNVYAAGGNSEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 155

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S AVT  G++  WG    G++G   ++ +           P  +    G  V   + G+ 
Sbjct: 156 SAAVTEDGQLFVWGDNSEGQIGLADKTCV---------SVPCQVD--VGKPVSSISCGYY 204

Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
           HSA I  +G +Y FG+    K  +L ++  ++R P  ++  +    +V CGG HT VLT 
Sbjct: 205 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 264

Query: 306 GGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            G +YT+G  + G LG G++    S P+ V+   S          I  V+CG  HTA I+
Sbjct: 265 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSH--------KIHNVTCGESHTAVIA 315

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           E G + T+G  G HG            LG  N  +   P + +   +   L V+CG  H
Sbjct: 316 ENGLMFTFG-DGRHGKLG---------LGEENFANQFDPALCSNFLSFTVLLVACGGCH 364



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F   ++  +ACGG H L  
Sbjct: 323 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVF 368


>gi|130488540|ref|NP_001076272.1| Williams-Beuren syndrome chromosome region 16 [Danio rerio]
 gi|126631511|gb|AAI33898.1| Si:dkeyp-36f5.3 protein [Danio rerio]
          Length = 451

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 33/313 (10%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKE 124
           ++  +  ++CG AH+L LT++  V++ G N FGQ G  I E+  YS   +  +I G    
Sbjct: 159 QETRVPQVSCGRAHSLVLTDSEGVFSMGSNTFGQCGRKIVEDEVYSGSHVVHKIEGFDSR 218

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V+Q++ G  HS  +T  G ++  G  ++GQ GLG       P+P   + L+G+  +Q A 
Sbjct: 219 VIQVACGQDHSLFLTDRGSVFACGWGADGQTGLGHHNKASCPVPVGGD-LAGVTVQQVAT 277

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIA 243
             + S+AV+  G+V  WG     +L    ES+ +         +PRL+  L+GV +++ A
Sbjct: 278 YGDCSLAVSTDGQVFGWGNSEYLQLASVTESTQIS--------SPRLL-PLKGVGRIRQA 328

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLI---SKLPYSEEVV---C 295
           A G    A ++E+G V+++G   + K   L +     R P+     S+   + +V    C
Sbjct: 329 ACGGTQVAVLNEDGDVFVWGFGILGKGPKLSESAIPERVPATFFGRSEFNPTVKVASIRC 388

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           G  H   +T GGEL+ WG N  GCLGIG  D  + P RV  P            +  V+C
Sbjct: 389 GLSHFAAVTDGGELFVWGKNVRGCLGIGKHDDQYFPWRVTVP----------GHVTDVAC 438

Query: 356 GWKHTAAISEGKI 368
           G  H  A+ +  I
Sbjct: 439 GVDHMVALVKSLI 451


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN +G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+   V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 41/258 (15%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVK 239
           QAA G   S+ +    +VLS G    G+LG  G +   L          P  I+ LE + 
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL----------PEPIQALETLT 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
           V + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V 
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVS 134

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ Q       V
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ-------V 186

Query: 354 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGEN 410
           + G  H+ A+S     ++GWG           +S GQL   G    V    P  V   +N
Sbjct: 187 AAGGAHSFALSLCGT-SFGWGS----------NSSGQLALSGRNVPVQSNKPLSVGALKN 235

Query: 411 VKALQVSCGFNHTGALLE 428
           +  + +SCG  HT  L +
Sbjct: 236 LGVVYISCGDAHTAVLTQ 253



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++      + ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI------TTLNGI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 171/394 (43%), Gaps = 64/394 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV  ++ +     +   G  H L L   G V+A G N +GQ
Sbjct: 224 WGDNRYGQLGDGTTVRRITPVQVASLDSVVSVS--VGAYHALALRADGTVWAWGHNAYGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N   + +P+ +S    +V  +  G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 282 LGDGTNTQRT-QPVSVS--LTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +     G+       G+  SVA+   G   SWG    G+LG            
Sbjct: 339 S--PLPLQAGMTGGVTL---VAGYRHSVALGADGTAWSWGDNVFGQLGD----------- 382

Query: 223 STSEYTPRLIK-ELEGVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
             + + PR+   ++ G+ +  A A  G LH+  +  NGR++ +GD        Q+G    
Sbjct: 383 --TTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDN-------QQGQLGN 433

Query: 280 RPSLISKLPYSEEV-----VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                S LP    +     V  GY HT  L S G ++TWG N  G LG G++    +P +
Sbjct: 434 GTQQDSSLPLPVNLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQ 493

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G             +  ++ G  H+ A+ S G +  WG             +  GQLG
Sbjct: 494 VVG----------LGGVTAIATGDNHSLALRSNGTVWAWG------------FNRYGQLG 531

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G  VD   P   +   N+ A  ++ G +H+ AL
Sbjct: 532 DGTAVDRRQPVQASGLSNIVA--IAAGGSHSLAL 563



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 168/386 (43%), Gaps = 48/386 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+L SR  P   SA     + +LA G AH L L   G V+A G N   Q
Sbjct: 124 WGDNASGQLGDGTLTSRLLPQRVSALSN--VVSLASGFAHVLALRADGTVWAWGDNRNNQ 181

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S  PL++ GL   VV +  G   S A+  DG L+ WG N  GQLG G    
Sbjct: 182 LG-DGTLTRSSVPLQVPGLSG-VVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVR 239

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L        ++G   ++A+   G V +WG    G+LG G          
Sbjct: 240 RITPV--QVASLD--SVVSVSVGAYHALALRADGTVWAWGHNAYGQLGDG---------- 285

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
           + ++ T  +   L  V+  +  AG  HS  +  +G V+ +GD    ++    GN    P 
Sbjct: 286 TNTQRTQPVSVSLTDVRTLV--AGNYHSLAVRTDGAVWAWGDNRYRQL--GTGNLTSSPL 341

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            L + +     +V G  H+  L + G  ++WG N  G LG  + +   +P +V G     
Sbjct: 342 PLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSG----- 396

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
               +       + G  HT  + + G++  W            G +  GQLG+G   D  
Sbjct: 397 ----LALGRADATSGQLHTVMLGANGRLWAW------------GDNQQGQLGNGTQQDSS 440

Query: 401 HPTIVNFGENVKALQVSCGFNHTGAL 426
            P  VN       + V+ G+ HT AL
Sbjct: 441 LPLPVNL---TDVISVASGYRHTAAL 463



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 171/389 (43%), Gaps = 52/389 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG  + E R  PV  S        A   G  HT+ L   G ++A G N  GQ
Sbjct: 372 WGDNVFGQLGDTTFEPRMAPVQVSGLALGRADA-TSGQLHTVMLGANGRLWAWGDNQQGQ 430

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       SL PL ++    +V+ +++GY H++A+  DG ++ WG N  GQLG G    
Sbjct: 431 LGNGTQQDSSL-PLPVN--LTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTD 487

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  L G+     A G   S+A+   G V +WG    G+LG G          
Sbjct: 488 R--PTPVQVVGLGGV--TAIATGDNHSLALRSNGTVWAWGFNRYGQLGDGT--------- 534

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P     L  + V IAA G  HS  +  +G V+ FG         Q GN  R  +
Sbjct: 535 AVDRRQPVQASGLSNI-VAIAAGGS-HSLALRSDGTVWAFGY----NFDGQLGNGTRTWT 588

Query: 283 LIS----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           L+      L     +  G  ++  L + G ++ WG N +G LG+G+      P +V G  
Sbjct: 589 LVPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSAQPLQVPG-- 646

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                    + I  ++ G  H+ A+ S+G +  WG       F+ +G     QLG+G   
Sbjct: 647 --------LSGITSIAAGSYHSLALRSDGWVWAWG-------FNFEG-----QLGNGTST 686

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             + P +V    N  A+ +  G  H+ A+
Sbjct: 687 PRLSPGLVAGMSN--AVAIIAGDQHSLAM 713



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G++  R  PV         + A+A G  H+L L   G V+A G N +GQ
Sbjct: 472 WGMNRFGQLGEGTVTDRPTPVQVVGLG--GVTAIATGDNHSLALRSNGTVWAWGFNRYGQ 529

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +    +P++ SGL   +V I+ G  HS A+  DG ++ +G N +GQLG G +  
Sbjct: 530 LGDGTAVDRR-QPVQASGLSN-IVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTRTW 587

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++P+  +   LS + +  A  G   S+A+   G V +WG   SG+LG G          
Sbjct: 588 TLVPV--QAVGLSSVVSLAA--GSLYSLALRADGTVWAWGYNASGQLGVGT--------- 634

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P  +  L G+     AAG  HS  +  +G V+ +G     ++          P 
Sbjct: 635 TQGSAQPLQVPGLSGITS--IAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPG 692

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           L++ +  +  ++ G  H+  + + G ++ WG N  G LG G       P +VQG
Sbjct: 693 LVAGMSNAVAIIAGDQHSLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQVQG 746



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 165/386 (42%), Gaps = 48/386 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G+L     P+         + A+  GG+ +L L   G ++A G N +GQ
Sbjct: 174 WGDNRNNQLGDGTLTRSSVPLQVPGLS--GVVAVVAGGSSSLALRADGTLWAWGDNRYGQ 231

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   + P++++ L   V   S G +H+ A+  DG ++ WG N+ GQLG G    
Sbjct: 232 LGDGTTV-RRITPVQVASLDSVVSV-SVGAYHALALRADGTVWAWGHNAYGQLGDGTNTQ 289

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   +  +  +       G   S+AV   G V +WG     +LG G          
Sbjct: 290 RTQPVSVSLTDVRTLVA-----GNYHSLAVRTDGAVWAWGDNRYRQLGTGNL-------- 336

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS   P       GV +    AG+ HS  +  +G  + +GD    ++          P 
Sbjct: 337 -TSSPLPLQAGMTGGVTL---VAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPV 392

Query: 283 LISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S L     +   G  HT +L + G L+ WG N+ G LG G+              S  
Sbjct: 393 QVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQ-----------DSSL 441

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
           P+    T ++ V+ G++HTAA+ S+G + TW            G +  GQLG G   D  
Sbjct: 442 PLPVNLTDVISVASGYRHTAALRSDGTVWTW------------GMNRFGQLGEGTVTDRP 489

Query: 401 HPTIVNFGENVKALQVSCGFNHTGAL 426
            P  V     V A  ++ G NH+ AL
Sbjct: 490 TPVQVVGLGGVTA--IATGDNHSLAL 513



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 150/322 (46%), Gaps = 33/322 (10%)

Query: 54  GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
           G+   R   V   A E+     LA G  H+L +   G V+A G N  GQLG   +   + 
Sbjct: 33  GAAAPREATVRQRAGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKA- 91

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P++++GL  +V  ++ G  +S A+  DG ++ WG N++GQLG G   +++  +P +V  
Sbjct: 92  SPVQVAGLT-QVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRL--LPQRVSA 148

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           LS + +   A GF   +A+   G V +WG   + +LG G         RS+    P  + 
Sbjct: 149 LSNVVSL--ASGFAHVLALRADGTVWAWGDNRNNQLGDGT------LTRSS---VPLQVP 197

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE 291
            L GV   +  AG   S  +  +G ++ +GD    ++   +G   RR  P  ++ L    
Sbjct: 198 GLSGVVAVV--AGGSSSLALRADGTLWAWGDNRYGQL--GDGTTVRRITPVQVASLDSVV 253

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
            V  G YH   L + G ++ WG N  G LG G+     + +R Q      PV    T + 
Sbjct: 254 SVSVGAYHALALRADGTVWAWGHNAYGQLGDGT-----NTQRTQ------PVSVSLTDVR 302

Query: 352 LVSCGWKHTAAI-SEGKILTWG 372
            +  G  H+ A+ ++G +  WG
Sbjct: 303 TLVAGNYHSLAVRTDGAVWAWG 324



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 43/364 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  Y +LG G+L S   P+   A     +  L  G  H++ L   G  ++ G N FGQ
Sbjct: 323 WGDNRYRQLGTGNLTSS--PLPLQAGMTGGVT-LVAGYRHSVALGADGTAWSWGDNVFGQ 379

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P+++SGL       ++G  H+  +  +G L+ WG N  GQLG G +  
Sbjct: 380 LG-DTTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQD 438

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+P  +  +  +     A G+  + A+   G V +WG    G+LG G          
Sbjct: 439 SSLPLPVNLTDVISV-----ASGYRHTAALRSDGTVWTWGMNRFGQLGEGTV-------- 485

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L GV     A G  HS  +  NG V+ +G     ++        R+P 
Sbjct: 486 -TDRPTPVQVVGLGGVTA--IATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQPV 542

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             S L     +  GG H+  L S G ++ +G N +G LG G+      P +  G      
Sbjct: 543 QASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTRTWTLVPVQAVG------ 596

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                +S+V ++ G  ++ A+ ++G +  W            G+++ GQLG G       
Sbjct: 597 ----LSSVVSLAAGSLYSLALRADGTVWAW------------GYNASGQLGVGTTQGSAQ 640

Query: 402 PTIV 405
           P  V
Sbjct: 641 PLQV 644



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 39/297 (13%)

Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           +G +   V+++ G +HS A+  DG ++ WG N  GQLG G    K  P+  +V  L+ + 
Sbjct: 46  AGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPV--QVAGLTQVT 103

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           +   A G + S+A+   G V +WG   SG+LG G           TS   P+ +  L   
Sbjct: 104 S--VAAGDQYSLALDADGAVWAWGDNASGQLGDGTL---------TSRLLPQRVSALS-- 150

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
            V   A+GF H   +  +G V+ +GD   +++       +  P  +  L     VV GG 
Sbjct: 151 NVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGVVAVVAGGS 210

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            +  L + G L+ WG N  G LG G+     +  R+  P   + +D + +     S G  
Sbjct: 211 SSLALRADGTLWAWGDNRYGQLGDGT-----TVRRIT-PVQVASLDSVVSV----SVGAY 260

Query: 359 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           H  A+ ++G +  W            GH++ GQLG G +     P  V+   +V+ L
Sbjct: 261 HALALRADGTVWAW------------GHNAYGQLGDGTNTQRTQPVSVSL-TDVRTL 304


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 180/405 (44%), Gaps = 45/405 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG+G  E +    V +A E + ++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               GK   + I IP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 130 KDDTGKTLRRDIVIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S   P  ++ LE  KVK+ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--KVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 388
            P++V     E         IV +SCG  H+ A++ +G++ ++G  G HG        + 
Sbjct: 293 VPQKVNLLAGE--------DIVQLSCGGTHSVALTQDGRMFSFG-RGDHGRLGYGKKVTT 343

Query: 389 GQLGHGNDVDYIHPTIVNFGENVK----ALQVSCGFNHTGALLEY 429
           GQ       D   P  ++  E  +    A  V+CG  HT A++E+
Sbjct: 344 GQPVE-VPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVEW 387



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 120/341 (35%), Gaps = 83/341 (24%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           L  WG   +GQLG+G    K       V  L     +    G   S+A+   GK+ +WG 
Sbjct: 7   LIAWGAGEDGQLGIGINEEK--EWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGW 64

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G LGH  E+         +E  P  +K L  V +  AA G  H   +D+ GR Y +G
Sbjct: 65  NQRGTLGHPAETK--------TENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWG 116

Query: 264 ----------------------------DRAVDKMLFQE----GNHA------------- 278
                                        R   K++ ++    G H+             
Sbjct: 117 GNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 176

Query: 279 -----------RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
                        P  +  L   + +  G +H   L   G L+ WG+NE G LG G    
Sbjct: 177 QPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
              P  VQG    + VD       + + GW  TA   +G++  WG  G HG         
Sbjct: 237 RSQPIPVQGLSGLTLVD-------IAAGGWHSTALTDDGEVYGWG-RGEHGRLG------ 282

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               G  +    + P  VN       +Q+SCG  H+ AL +
Sbjct: 283 ---FGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQ 320


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 188/395 (47%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDF 100
            +WG  D  +LG G   S+ +  V S F          GG+ +LF+ +  G +YA G    
Sbjct: 2898 VWGLNDKDQLG-GMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTN 2956

Query: 101  GQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
            G+LG+  S N+ Y   P  I  L + V++   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2957 GRLGLGHSNNVPY---PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3013

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3014 GHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3069

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+LIK L G ++   A G     +  + + G V+ +GD    K+   
Sbjct: 3070 -------NITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG 3122

Query: 274  EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  I +L   E  ++ CG   +  LT  GE++TWG  +   LG GS   +  P
Sbjct: 3123 GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP 3182

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              +     ES  D+    ++ V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3183 TVI-----ESLKDK---KVIHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQ 3222

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G+G  +    P +V+  E+V   +V+CG +H+ A
Sbjct: 3223 QGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIA 3257



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 176/396 (44%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G VYATG    G
Sbjct: 3875 WGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLV-GGEQTLFAVTADGKVYATGYGAGG 3933

Query: 102  QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI       +   LE ++   +KK  + +++G  H  A++ D ++Y WG+  +G+LG 
Sbjct: 3934 RLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH 3991

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + A     P  +E L G      A G   S A+T  G++ +WG G  GRLGHG     
Sbjct: 3992 GNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD---- 4045

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+LI+EL G KV   A  +G   + CI ++  V+ +GD    K+     
Sbjct: 4046 -----SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4100

Query: 276  NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ + +  P++
Sbjct: 4101 DGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK 4160

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A S EG++ TW            G +  G
Sbjct: 4161 VAALQG-----------KKIISIATGSLHCVACSDEGEVFTW------------GDNDEG 4197

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            QLG         P +V+  +  K   V+CG  HT A
Sbjct: 4198 QLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLA 4233



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 3064

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +NI   L+P  I  L    +VQ++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3065 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 3122

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+ +   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3123 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 3179

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P +I+ L+  KV   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3180 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3228

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
               R+P+L+  L   +   V CG  H+   T
Sbjct: 3229 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 3259



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 165/360 (45%), Gaps = 65/360 (18%)

Query: 90   GC-VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
            GC V+  GLND  QLG          +  +    L P+ I+G  K +  +S         
Sbjct: 2893 GCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSH-------- 2944

Query: 139  TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGG 196
              +G+LY  G+ +NG+LGLG   +  +P P  +  LS    K+ A+  G + ++A+T  G
Sbjct: 2945 --EGKLYACGEGTNGRLGLGH--SNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDG 3000

Query: 197  KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            KV SWG G  G+LGHG   ++           P++I+ L   K++  A G  HSA I  +
Sbjct: 3001 KVFSWGEGEDGKLGHGNRLNL---------DKPKMIEALRSKKIRDIACGSSHSAAITSS 3051

Query: 257  GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTW 312
            G +Y +G     ++   +     +P LI  L      +V CG     T  LT  G +++W
Sbjct: 3052 GELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSW 3111

Query: 313  GSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
            G  + G LG G     ++ H+ ER+               +V + CG + + A+++ G++
Sbjct: 3112 GDGDFGKLGRGGSEGCNIPHNIERLNA-----------LEVVQIECGAQFSLALTKTGEV 3160

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             TWG G               +LGHG+D     PT++   ++ K + V+ G  H  A+ +
Sbjct: 3161 WTWGKGDYF------------RLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD 3208



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 154/363 (42%), Gaps = 44/363 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P  C    + ++K + C     L LT+TG V+         +  S +     E   +SG+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF--------MYYSSDTQCPQEMTGLSGI 513

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
               +       H  A+T D E+Y WG    G+LG G  + K    PT ++ L G     
Sbjct: 514 NMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK--EEPTLIQALKGKDIID 571

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G   S A++  G + +WG G  GRLGHG     L         TP +I  L    + 
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCL---------TPTMISALSDEHII 622

Query: 242 IAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
             A G  + H+ CI   G+VY +GD    K+     + ++ P LI KL   +  +V CG 
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGA 682

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             +  L+  G +YTWG  E   LG  + + +  PE V     E   D+    +V VS G 
Sbjct: 683 QFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMV-----EVLRDR---KVVGVSLGV 734

Query: 358 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H  A+++ G++  +GWG +             Q+   +++    P ++   +  K + V
Sbjct: 735 SHVLALTDQGEV--YGWGKNENK----------QICDSSELFVQQPRLIEALKGQKVVGV 782

Query: 417 SCG 419
            CG
Sbjct: 783 CCG 785



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 21/273 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G   ++  P +  A +   +  + CGG ++  ++  G +Y  G  ++G+
Sbjct: 539 WGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGR 598

Query: 103 L--GISENIGYSLEPLRISGLKKE-VVQISTG--YHHSSAITVDGELYMWGKNSNGQLGL 157
           L  G +E+    L P  IS L  E +++++ G  Y H+  IT  G++Y WG    G+LG 
Sbjct: 599 LGHGTAED---CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGR 655

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G        +P  +E L  +   Q   G + SVA++  G V +WG G   +LGH  E ++
Sbjct: 656 GGSDGS--KLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENV 713

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                      P +++ L   KV   + G  H   + + G VY +G     ++       
Sbjct: 714 ---------RFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELF 764

Query: 278 ARRPSLISKLPYSEE--VVCGGYHTCVLTSGGE 308
            ++P LI  L   +   V CG   +   T   E
Sbjct: 765 VQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 16/220 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G+ E    P + SA     +  +ACG   AHTL +T  G VY+ G  D+
Sbjct: 591 WGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDY 650

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G  L P  I  L+  ++VQ+  G   S A++ DG +Y WGK    +  LG 
Sbjct: 651 GKLGRGGSDGSKL-PRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWK--LGH 707

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + +  P  VE L        +LG    +A+T  G+V  WG   + ++    E  +  
Sbjct: 708 PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFV-- 765

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGR 258
                    PRLI+ L+G KV     G   S A  D+N R
Sbjct: 766 -------QQPRLIEALKGQKVVGVCCGPAQSFAWTDDNER 798



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 41/307 (13%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            Q STG   S   TV   +++WG N   QLG G K +KV  +P + + LS ++    A G 
Sbjct: 2882 QDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAGGS 2936

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
            +    V+  GK+ + G G +GRLG G  +++           PR I  L    +K  A  
Sbjct: 2937 KSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVAVH 2987

Query: 245  AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
            +G  H+  +  +G+V+ +G+    K+      +  +P +I  L   +  ++ CG  H+  
Sbjct: 2988 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 3047

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-- 360
            +TS GELYTWG  E G LG G       P+ ++          +   IV V+CG +    
Sbjct: 3048 ITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKS--------LVGHRIVQVACGSRDAQT 3099

Query: 361  -AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             A   EG + +WG     G F        G+LG G       P  +     ++ +Q+ CG
Sbjct: 3100 LALTDEGWVFSWG----DGDF--------GKLGRGGSEGCNIPHNIERLNALEVVQIECG 3147

Query: 420  FNHTGAL 426
               + AL
Sbjct: 3148 AQFSLAL 3154



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 126/289 (43%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  IPT  E LS +   Q   G +   AVT  GKV + 
Sbjct: 3870 GTIYGWGHNHRGQLG-GIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3927

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+L          P L++ ++ V +K  A  +G  H   +  +  V
Sbjct: 3928 GYGAGGRLGIGGTDSVL---------VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3978

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+          P LI  L   E  ++ CGG H+  +TS G+LYTWG    
Sbjct: 3979 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY 4038

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P+ ++       +D  C S      G   T  I++   + W WG   
Sbjct: 4039 GRLGHGDSEDQLKPKLIEELVGYKVIDVACGS------GDAQTLCITDDDNV-WSWG--- 4088

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  +     +  ++V CG   + AL
Sbjct: 4089 -----DGDY--GKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 4130



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 27/223 (12%)

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGF-LHSACIDENGRVYIFGDRAVDKM 270
           Q   +     S+    P+ +  L G+  +KIAA     H   + ++  VY +G+    ++
Sbjct: 488 QTGKVFFMYYSSDTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRL 547

Query: 271 LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              + +    P+LI  L   +  +V CGG ++  +++ G LYTWG    G LG G+ +  
Sbjct: 548 GHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDC 607

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCG--WKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
            +P  +     E         I+ V+CG  + HT  I S+GK+ +WG  G +G     G 
Sbjct: 608 LTPTMISALSDE--------HIIKVACGSFYAHTLCITSQGKVYSWG-DGDYGKLGRGG- 657

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           S G +L          P ++   +NVK +QV CG   + AL E
Sbjct: 658 SDGSKL----------PRLIEKLQNVKIVQVYCGAQFSVALSE 690



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 40/234 (17%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A          
Sbjct: 3868 GSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTA------- 3920

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+VY  G  A  ++     +    P+L+  + +       V  GG H   L++  ++
Sbjct: 3921 --DGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3978

Query: 310  YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
            Y+WG  ++G LG G+     +P   E +QG             I+ ++CG  H+AAI S 
Sbjct: 3979 YSWGEGDDGKLGHGNRLACETPKLIEALQG-----------YEIIDIACGGAHSAAITST 4027

Query: 366  GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            G++ TWG G              G+LGHG+  D + P ++      K + V+CG
Sbjct: 4028 GQLYTWGKG------------RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 4069


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 163/355 (45%), Gaps = 44/355 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           L+CG  H+  +T  G +Y  G ND+GQLG      Y+ +P  +  LK E V  ++ G +H
Sbjct: 40  LSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYT-KPSVVKKLKPEKVYMVACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           + A T  G LY +G   +GQLG G   A+   +P  +E L     K  A G + S A+T 
Sbjct: 99  TIAATESGHLYSFGCGGDGQLGHGD--AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITE 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ +WG+ G G+ G G+++ I            RL   L G KV++ + G+ H A + 
Sbjct: 157 NGELYTWGSCGEGQNGLGEDTEI----------PTRL--HLHG-KVRMVSCGYYHMAVVT 203

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELY 310
           E+G +Y+ G++   K+           S + K+   E+ V    CG   T V+T  G +Y
Sbjct: 204 EDGSLYMCGEKEGGKLGLDH-EQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVY 262

Query: 311 TWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
           T+G    G LG+G S+     PER+  P  E            VSCG   TA I++    
Sbjct: 263 TFGQGNQGQLGLGSSMMETEFPERI--PLFEK------VKARTVSCGESFTAVITK---- 310

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVNFGENVKALQVSCGFNH 422
                  HG     G    G+LG G++   +   P  V    N     V+CG  H
Sbjct: 311 -------HGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCH 358



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 139/307 (45%), Gaps = 34/307 (11%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VV +S G  HS+ +T +G+LY +G N  GQLG G    K    P+ V+ L        A 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGN--TKSYTKPSVVKKLKPEKVYMVAC 94

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++A T  G + S+G GG G+LGHG          +   + P++I+ L+  K K  A
Sbjct: 95  GRNHTIAATESGHLYSFGCGGDGQLGHGD---------AEDSHVPKIIEGLDVQKYKHLA 145

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
            G   SA I ENG +Y +G     +     G     P+ +        V CG YH  V+T
Sbjct: 146 CGSDFSAAITENGELYTWGSCGEGQNGL--GEDTEIPTRLHLHGKVRMVSCGYYHMAVVT 203

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             G LY  G  E G LG+         E++        +  I   +V+ +CG + TA ++
Sbjct: 204 EDGSLYMCGEKEGGKLGL-------DHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVT 256

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNH 422
           + G + T+G G              GQLG G+  ++   P  +   E VKA  VSCG + 
Sbjct: 257 KNGSVYTFGQGNQ------------GQLGLGSSMMETEFPERIPLFEKVKARTVSCGESF 304

Query: 423 TGALLEY 429
           T  + ++
Sbjct: 305 TAVITKH 311



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 153/324 (47%), Gaps = 31/324 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D+G+LG G+ +S  +P V    +   +  +ACG  HT+  TE+G +Y+ G    GQ
Sbjct: 59  FGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQ 118

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    S  P  I GL  ++   ++ G   S+AIT +GELY WG    GQ GLG+  
Sbjct: 119 LGHGDAED-SHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                IPT++     +  +  + G+     VT  G +   G    G+LG   E      L
Sbjct: 178 ----EIPTRLHLHGKV--RMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQ-----L 226

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
            +TS+   + IK +E  +V +AA G   +A + +NG VY FG     ++       E   
Sbjct: 227 DNTSQL--QKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEF 283

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQ 335
             R  L  K+  +  V CG   T V+T  G LYT+G   +G LG+G         PE+V+
Sbjct: 284 PERIPLFEKVK-ARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVK 342

Query: 336 GPFSESPVDQICTSIVLVSCGWKH 359
             F+         ++ +V+CG  H
Sbjct: 343 -RFNN-------FTVKMVTCGGCH 358



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 13/81 (16%)

Query: 349 SIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
           ++V +SCG +H+A ++  GK+ T+G             +  GQLGHGN   Y  P++V  
Sbjct: 36  AVVNLSCGDEHSAVVTANGKLYTFGC------------NDWGQLGHGNTKSYTKPSVVKK 83

Query: 408 GENVKALQVSCGFNHTGALLE 428
            +  K   V+CG NHT A  E
Sbjct: 84  LKPEKVYMVACGRNHTIAATE 104


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 189/443 (42%), Gaps = 95/443 (21%)

Query: 43  WGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG    G LG  G +E  W P+   +     +K +A G  H+L LTE G V + GLND G
Sbjct: 572 WGANSDGVLGHTGGIEQLW-PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQG 630

Query: 102 QLGI-------SENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           Q G        S ++     P  I       KK VV I+ G +HS+ +T DGELY +G+ 
Sbjct: 631 QCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG 690

Query: 151 SNGQLG------LGK------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
              QLG      LG+            + +   P PT++  L+G   KQ A G   S  V
Sbjct: 691 GEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACV 750

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI---AAAGFLH 249
           T  G + +WG G +G+LGHG           T + TP+ ++   G+K KI    A G  H
Sbjct: 751 TEEGALYTWGRGANGQLGHGD---------MTDQATPKRVE--AGIKDKIMVKVACGENH 799

Query: 250 SACIDENGRVYIFGDRAVDKM---------LFQEG-------NHARRPSLISKLPYSE-- 291
           SA +D  G +Y  G     ++            EG          R P+ +S L      
Sbjct: 800 SAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQ 859

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
             ++ CG      +T+ G LYTWG  +   LG+G    +  P  +      S +D     
Sbjct: 860 FVDIACGHGFCAAITNRGLLYTWG--KGTALGLGPSGDVSEPTHL------SSID----G 907

Query: 350 IVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IV 405
           +V V+CG  H AA+++ G++  W            G S  G+LG G   + +  T   + 
Sbjct: 908 VVSVACGDIHAAALTDKGQLYMW------------GSSEAGRLGDGRSTEGVTRTPKLVP 955

Query: 406 NFGE--NVKALQVSCGFNHTGAL 426
            F +    + L VS G  H  A+
Sbjct: 956 AFADIHQARCLGVSIGPRHALAI 978



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 51/319 (15%)

Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
           IS+    SL  L  + LK +  +    Y+ +      G +  WG NS+G LG      ++
Sbjct: 531 ISKQNMTSLHLLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQL 589

Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSILG 219
            P+   +E LS +  K  A G   S+ +T  G+V S+G    G+ G       + S +  
Sbjct: 590 WPLA--IESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAA 647

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVD-- 268
             R      P  +++     V IAA G+ HSA +  +G +Y FG         D  +   
Sbjct: 648 VARPRPIVLPDDLRK--KTVVSIAAGGY-HSALVTADGELYTFGRGGEFQLGHDTVMALG 704

Query: 269 ---KMLFQEGNHAR------RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
                L    N A+      +P+ +S L     ++V CG +H+  +T  G LYTWG   N
Sbjct: 705 EGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGAN 764

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           G LG G +    +P+RV+        D+I   +V V+CG  H+AA+            S 
Sbjct: 765 GQLGHGDMTDQATPKRVEAGIK----DKI---MVKVACGENHSAAVD-----------SA 806

Query: 378 GTFSEDGHSSGGQLGHGND 396
           G     G    GQLG G++
Sbjct: 807 GVIYTTGGDESGQLGKGDE 825


>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1193

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 160/372 (43%), Gaps = 47/372 (12%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---------ACGGAHTLFLTETG 90
            A  WG+  YGRLG G+   R  PV+    ++ +   L         + G  ++L +   G
Sbjct: 696  AYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDYYSLAVGSDG 755

Query: 91   CVYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITV 140
             VYA G N +GQLG + +   S  P+R+           GLK   +Q+S G +HS A+  
Sbjct: 756  YVYAWGYNSYGQLG-NNSTSSSYVPVRVRDPASPNDASKGLK--AIQVSAGDYHSLALGS 812

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGG 195
            DG  Y WG  S G+LG   +++  +P+      +  +   G+   Q + G   S+AV   
Sbjct: 813  DGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSD 872

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G   +WG G  G+LG+   SS    +R     +P      +G+K    +AG+ HS  +  
Sbjct: 873  GYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASP--TDTSKGLKAAQISAGYGHSLAVGS 930

Query: 256  NGRVYIFGDRAVDKMLFQEG-------------NHARRPSLISKLPYSEEVVCGGYHTCV 302
            +G  Y +G   ++    Q G                  PS  SK   + +V  G  H+  
Sbjct: 931  DGYAYAWG---LNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLA 987

Query: 303  LTSGGELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +   G  Y WG N+NG LGI GS      P +V      +         V ++ G  H+ 
Sbjct: 988  VDKDGNAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSL 1047

Query: 362  AI-SEGKILTWG 372
            AI ++G    WG
Sbjct: 1048 AIGTDGNTKAWG 1059



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 147/340 (43%), Gaps = 43/340 (12%)

Query: 39   FAALWGNGDYGRLGLGSLESRWRPV-----VCSAFEKHSLKAL--ACGGAHTLFLTETGC 91
            +   WG   YG+LG  S  S + PV              LKA+  + G  H+L L   G 
Sbjct: 756  YVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVSAGDYHSLALGSDGY 815

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITVD 141
             YA G   +G+LG + +   S  P+R+           GLK    Q+S G +HS A+  D
Sbjct: 816  AYAWGDGSYGKLG-NNSRSSSYVPVRVRDPDSPNDASKGLK--ATQVSAGQNHSLAVGSD 872

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGGG 196
            G  Y WG  S G+LG    ++  +P+      +  +   G+   Q + G+  S+AV   G
Sbjct: 873  GYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSLAVGSDG 932

Query: 197  KVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
               +WG      +LG+   S+    +R     +P      +G+K    +AG  HS  +D+
Sbjct: 933  YAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPS--DASKGLKATQVSAGQEHSLAVDK 990

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------------EVVCGGYHTCVL 303
            +G  Y +GD   +  L  +G+    P  +  L  ++            ++  G +H+  +
Sbjct: 991  DGNAYAWGDND-NGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAI 1049

Query: 304  TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
             + G    WGSN +G LG G+ +   +P  V   F+  PV
Sbjct: 1050 GTDGNTKAWGSNRDGRLGDGTTNTKWAPVPVA--FNLQPV 1087



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 112/262 (42%), Gaps = 28/262 (10%)

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK------VECLSGIFT-KQAAL 184
           Y  S A+  DG  Y WG NS G+LG G    +  P+  K         L   FT  Q + 
Sbjct: 684 YGFSLAVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSA 743

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   S+AV   G V +WG    G+LG+   SS    +R     +P      +G+K    +
Sbjct: 744 GDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPN--DASKGLKAIQVS 801

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-------------RPSLISKLPYSE 291
           AG  HS  +  +G  Y +GD +  K+    GN++R              P+  SK   + 
Sbjct: 802 AGDYHSLALGSDGYAYAWGDGSYGKL----GNNSRSSSYVPVRVRDPDSPNDASKGLKAT 857

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V  G  H+  + S G  Y WG    G LG  S      P RV+ P S +   +   +  
Sbjct: 858 QVSAGQNHSLAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKA-A 916

Query: 352 LVSCGWKHTAAI-SEGKILTWG 372
            +S G+ H+ A+ S+G    WG
Sbjct: 917 QISAGYGHSLAVGSDGYAYAWG 938



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 103/271 (38%), Gaps = 57/271 (21%)

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG +A  + P  T         +    L +  S+AV   G   +WG+   GRLG G    
Sbjct: 655 LGNEATTITPPDTSRGIRFSQISGSNDLTYGFSLAVGSDGNAYAWGSNSYGRLGDGT--- 711

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 +T   TP L+K+                                 D+  +    
Sbjct: 712 ------ATQRTTPVLVKK--------------------------------PDRKTY---- 729

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               P L     Y  +V  G Y++  + S G +Y WG N  G LG  S    + P RV+ 
Sbjct: 730 ----PDLPEDFTY-MQVSAGDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRD 784

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P S +   +   +I  VS G  H+ A+ S+G    WG  GS+G    +  SS        
Sbjct: 785 PASPNDASKGLKAI-QVSAGDYHSLALGSDGYAYAWG-DGSYGKLGNNSRSSSYVPVRVR 842

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           D D  +    +  + +KA QVS G NH+ A+
Sbjct: 843 DPDSPN----DASKGLKATQVSAGQNHSLAV 869


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 10/270 (3%)

Query: 47  DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
           D+       LE    P      E   +  ++CG  H+L +   G V+A G    GQLG  
Sbjct: 22  DFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG 81

Query: 107 ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           E  G +  P +I  L   +++Q+S G +HS A++  G+++ WGKNS GQLGLGK+     
Sbjct: 82  EVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQ- 140

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             P +V  L GI   Q A G   S A++  G    WG   +G+L       + G      
Sbjct: 141 DSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLA------LSGNNVPVQ 194

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            Y PR I  L  + V   + G+ H+A + +NG+V+ FGD +  ++        R P L+ 
Sbjct: 195 SYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVE 254

Query: 286 KLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           ++     ++ CG YHT   + + G++ ++G
Sbjct: 255 RIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 284



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 136/273 (49%), Gaps = 34/273 (12%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           +LE LR+S        +S G  HS A+   G ++ WG  S GQLG G+    +   P K+
Sbjct: 42  TLETLRVS-------LVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGE-VKGINFTPKKI 93

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           + L+GI   Q + G   S+A++ GG+V SWG    G+LG G+E          S+ +P+ 
Sbjct: 94  KTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFP--------SQDSPQR 145

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP 288
           ++ LEG+ +   AAG  HS  +  +G  + +G+ +  ++     N    + +P  I  L 
Sbjct: 146 VRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALR 205

Query: 289 Y--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQ 345
                 + CG  HT VLT  G+++T+G N  G LG       HSP  + +GP     +D 
Sbjct: 206 NLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG-------HSPSAQDRGPQLVERIDG 258

Query: 346 ICTSIVLVSCGWKHTAA--ISEGKILTWGWGGS 376
           + + I    CG  HT A   + G+++++G G S
Sbjct: 259 LVSQI---DCGSYHTLAYVYTTGQVVSFGRGPS 288



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 26/246 (10%)

Query: 24  LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAH 82
           L +C R       R FA  WG G  G+LG G ++   + P          +  ++CG  H
Sbjct: 59  LAVCHR------GRVFA--WGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
           +L L+E G V++ G N  GQLG+ +       P R+  L+   + Q++ G  HS A++V 
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVS 170

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           G  + WG NS GQL L   +   +P+    P  +  L  +     + G+E +  +T  GK
Sbjct: 171 GTSFGWGNNSAGQLAL---SGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGK 227

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V ++G    G+LGH   +   G         P+L++ ++G+  +I    +   A +   G
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRG---------PQLVERIDGLVSQIDCGSYHTLAYVYTTG 278

Query: 258 RVYIFG 263
           +V  FG
Sbjct: 279 QVVSFG 284



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 81/265 (30%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +  L  +     + G E S+AV   G+V +WGAG  G+LG G+   I         +
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGI--------NF 88

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ IK L G+K+                                               
Sbjct: 89  TPKKIKTLTGIKII---------------------------------------------- 102

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQI 346
               +V CG YH+  L+ GG++++WG N  G LG+G       SP+RV+      P+ Q 
Sbjct: 103 ----QVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRS-LEGIPLAQ- 156

Query: 347 CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPT 403
                 V+ G  H+ A+S     ++GW          G++S GQL   G+   V    P 
Sbjct: 157 ------VAAGGAHSFALSVSGT-SFGW----------GNNSAGQLALSGNNVPVQSYKPR 199

Query: 404 IVNFGENVKALQVSCGFNHTGALLE 428
            +    N+  + +SCG+ HT  L +
Sbjct: 200 SIGALRNLGVIYISCGYEHTAVLTQ 224


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 162/371 (43%), Gaps = 36/371 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  S+ +   PV+ S  +  +   ++ G  H+L +   G  YA G N  G+
Sbjct: 73  WGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGR 132

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS---TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   + G S+  L  +G     V IS    G  HS A+  +G++Y WG N +GQLG G 
Sbjct: 133 LGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGT 192

Query: 160 KAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             A  +P+      + +G+   Q + G   S+A+   GK  +WG    G+LG G  S   
Sbjct: 193 TLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSIS--- 249

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
              R+ +   P L+    GV     +AG LHS  +  +G+ Y +G+    ++       +
Sbjct: 250 ---RTPA---PALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSS 303

Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P L+S +      +V  G  H+  + + G  Y WG N NG LG  +I     P  V  
Sbjct: 304 LAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTA 363

Query: 337 PFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P      D +  +   +  G  H+  A S+    TW            G +S GQLG+G 
Sbjct: 364 P------DGV--TFTRIEAGGLHSLTAASDENTYTW------------GANSFGQLGNGT 403

Query: 396 DVDYIHPTIVN 406
               + P  ++
Sbjct: 404 SDGSLVPVAIS 414



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 154/378 (40%), Gaps = 68/378 (17%)

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
           +F   S+ AL+      L +  +G  +A     FG        G +     +SG+   VV
Sbjct: 3   SFRVASVVALSA-----LLVGMSGSAFAAPAETFGS-------GPTAGGTTVSGVLPGVV 50

Query: 127 --QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
             Q+S G +HS A+  DG +Y WG NS+GQLG        +P+   V    G+   Q + 
Sbjct: 51  FTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPV--LVSTPDGVTFTQVSA 108

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE---LEGVKVK 241
           G + S+AV   G   +WG    GRLG+G          ST    P L+       GV + 
Sbjct: 109 GADHSLAVGSDGNAYAWGRNTDGRLGNGT---------STGSSVPLLVSAGAVPSGVTIS 159

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----------- 290
              AG  HS  +  NG +Y +G         + G      +L S +P             
Sbjct: 160 QVMAGGFHSLAVGSNGDIYSWGYN-------RSGQLGDGTTLASSVPLKVSAGAVPAGVT 212

Query: 291 -EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
             +V  G  H+  + S G+ Y WG    G LGIGSI    +P  V  P           S
Sbjct: 213 FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAP--------AGVS 264

Query: 350 IVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
              VS G  H+ A+ S+GK   W            G++  GQLG+      + P +V+  
Sbjct: 265 FTQVSAGDLHSLAVGSDGKAYAW------------GNNDSGQLGNATTTSSLAPVLVSPM 312

Query: 409 ENVKALQVSCGFNHTGAL 426
             +   QVS G +H+ A+
Sbjct: 313 GGLAVTQVSAGADHSLAI 330



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 155/353 (43%), Gaps = 32/353 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           ++ G  H+L +   G +YA G N  GQLG +  +  S+  L  +       Q+S G  HS
Sbjct: 54  VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTG 194
            A+  DG  Y WG+N++G+LG G      +P+      + SG+   Q   G   S+AV  
Sbjct: 114 LAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGS 173

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G + SWG   SG+LG G   +    L+ ++   P       GV     +AG  HS  I 
Sbjct: 174 NGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP------AGVTFSQVSAGDRHSLAIG 227

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYT 311
            NG+ Y +G+    ++     +    P+L+S  P      +V  G  H+  + S G+ Y 
Sbjct: 228 SNGKTYAWGEARGGQLGIGSISRTPAPALVSA-PAGVSFTQVSAGDLHSLAVGSDGKAYA 286

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           WG+N++G LG  +     +P  V      SP+  +   +  VS G  H+ AI ++G    
Sbjct: 287 WGNNDSGQLGNATTTSSLAPVLV------SPMGGLA--VTQVSAGADHSLAIGADGNAYA 338

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           WG             +  GQLG+        P +V   + V   ++  G  H+
Sbjct: 339 WGL------------NVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHS 379


>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
          Length = 681

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +         IK+L        +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVFFTPADTIKQL--------SAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 265 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 307

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 308 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 351

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 352 GLLYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 42/254 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYH 239

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQV 416
           +A ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV
Sbjct: 240 SAFVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQV 286

Query: 417 SCGFNHTGALLEYV 430
           +CG  HT  L E V
Sbjct: 287 ACGGGHTVVLTEKV 300



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 41/199 (20%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E         + 
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPE--------KVK 128

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGE 409
           L +CG  HT       +++   GG +      G ++ GQLG G  +D D  H  IV F  
Sbjct: 129 LAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTP 176

Query: 410 NVKALQVSCGFNHTGALLE 428
                Q+S G N + AL E
Sbjct: 177 ADTIKQLSAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 152/339 (44%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  +    P +  +    S+  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 301 WGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNA 360

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  ++  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 361 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 419

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            K  + +  P +VE LSG+ T   A G             QS +    GK+ +WG G   
Sbjct: 420 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKS 477

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   +  +  +G+VY  G   V
Sbjct: 478 RLGHGDKESRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 527

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L       + P L+  KL     EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 528 YGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGD 587

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           I+   +P  V     E  V  I       +CG   TAAI
Sbjct: 588 IEDRKAPSLVDT-LKERHVKNI-------ACGSNFTAAI 618



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 166/371 (44%), Gaps = 54/371 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYH 133
           +ACG  H   ++  G V+  G    G+LG    +G  +  P  I  L    V  ++ G  
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLG--HGMGKDVTGPQLIESLAATSVDFVACGEF 339

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           H+ A+T+ GE+Y WG  ++  G LG G   +  IP       L G+     + G   +  
Sbjct: 340 HTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQIASVSCGPWHTAL 398

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG + ++         + PR ++ L G++    A G  H+A
Sbjct: 399 ITSTGQLFTFGDGTFGVLGHGDKETV---------FYPREVESLSGLRTIAVACGVWHAA 449

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EEVVCG 296
            I E           +G+++ +GD   DK     G+   R  P+ +S L       V CG
Sbjct: 450 AIVEVIVTQSTSSISSGKLFTWGDG--DKSRLGHGDKESRLKPTCVSALIDHTFHRVACG 507

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              T  LT+ G++YT GS   G LG  + D    P  V+    +  V++I       +CG
Sbjct: 508 HSLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLIKDCVEEI-------ACG 559

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   P++V+  +      
Sbjct: 560 AYHVAVLTSRNEVFTWGKGAN------------GRLGHGDIEDRKAPSLVDTLKERHVKN 607

Query: 416 VSCGFNHTGAL 426
           ++CG N T A+
Sbjct: 608 IACGSNFTAAI 618



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 132/304 (43%), Gaps = 42/304 (13%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  + G  K A  V     + IP  +E    +     A G   +  V+
Sbjct: 234 GDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVS 293

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V +WG    GRLGHG    + G         P+LI+ L    V   A G  H+  +
Sbjct: 294 RQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSVDFVACGEFHTCAV 344

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G       P  IS  P        V CG +HT ++TS G
Sbjct: 345 TMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTG 403

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-----TSIVLVSCGWKHTAA 362
           +L+T+G    G LG G  + +  P  V+       +   C      +IV V    + T++
Sbjct: 404 QLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVT-QSTSS 462

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           IS GK+ TWG          DG  S  +LGHG+    + PT V+   +    +V+CG + 
Sbjct: 463 ISSGKLFTWG----------DGDKS--RLGHGDKESRLKPTCVSALIDHTFHRVACGHSL 510

Query: 423 TGAL 426
           T  L
Sbjct: 511 TVGL 514



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H+A +   G V+ +G+ +  ++    G     P LI  L 
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLA 327

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  + V CG +HTC +T  GE+YTWG  ++  G LG G+ DV H  P+R+ GP      
Sbjct: 328 ATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEG--- 383

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 I  VSCG  HTA I S G++ T+G     GTF        G LGHG+     +P
Sbjct: 384 ----LQIASVSCGPWHTALITSTGQLFTFG----DGTF--------GVLGHGDKETVFYP 427

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V     ++ + V+CG  H  A++E +
Sbjct: 428 REVESLSGLRTIAVACGVWHAAAIVEVI 455


>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Acyrthosiphon pisum]
          Length = 505

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 161/324 (49%), Gaps = 31/324 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G   +G+LGLG  E+ ++P    + +   +K +ACG +HT+  TE   VY  G N  GQ
Sbjct: 58  FGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNSDGQ 117

Query: 103 LGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-- 158
           LG S  ++ +S  P+ ++    K ++Q+S G +H++A+  +G++Y+WG NS+ QLGL   
Sbjct: 118 LGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSM 177

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +  + +PT V     +     + G   +  VT  G + + G    G+LGHG  S   
Sbjct: 178 DDDSVNVSVPTIVPIALPVL--YVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWS--- 232

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               S  + T +++K          + G  H+  +++ G+V++ G+    ++  +     
Sbjct: 233 ---LSRVDTTEKIVK---------VSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQ 280

Query: 279 --RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               P  I+  P   ++VCG  H+  +T+ G+L+  G  + G LGI  ++ + +P  V  
Sbjct: 281 GHLYPCPITNEPIV-QIVCGQSHSAFITASGKLFMCGDGKYGKLGI-DVNQITTPTLVLA 338

Query: 337 PFSESPVDQICTSIVLVSCGWKHT 360
              ++       ++ +VSCG  HT
Sbjct: 339 FVDKN------LNVQMVSCGGNHT 356



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 56/361 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           ++CG  H+  + + G V+  G N FGQLG+  +EN+    +P  +  LK + V+ I+ G 
Sbjct: 39  ISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENV---YKPNCVKSLKPDKVKHIACGR 95

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+   T +  +Y +G NS+GQLG          +P +V   +     Q + G   + A+
Sbjct: 96  SHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAAL 155

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V  WG+    +LG            S +   P ++     + V   + G  H+A 
Sbjct: 156 LENGDVYVWGSNSDRQLGLNSMDD-----DSVNVSVPTIVP--IALPVLYVSCGHTHTAF 208

Query: 253 IDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
           +   G +Y  GDR   K+   L+           +S++  +E++V   CG  HT  L   
Sbjct: 209 VTRIGDLYTCGDREYGKLGHGLWS----------LSRVDTTEKIVKVSCGANHTIALNDA 258

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-E 365
           G+++  G+N+ G +G+ ++         QG     P+      IV + CG  H+A I+  
Sbjct: 259 GKVFVCGNNDCGQIGLRNV-------TSQGHLYPCPITN--EPIVQIVCGQSHSAFITAS 309

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIV--NFGENVKALQVSCGFNH 422
           GK+   G G              G+LG   DV+ I  PT+V     +N+    VSCG NH
Sbjct: 310 GKLFMCGDG------------KYGKLGI--DVNQITTPTLVLAFVDKNLNVQMVSCGGNH 355

Query: 423 T 423
           T
Sbjct: 356 T 356



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 150/348 (43%), Gaps = 55/348 (15%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG V+      +G+   ++NI     P         V++IS G  HS  +  +G ++
Sbjct: 7   IPETGAVFT-----YGKSSFADNI-----PSHFFIRNDPVIEISCGEEHSGIVCKNGRVF 56

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +GKNS GQLGLG    + +  P  V+ L     K  A G   ++  T    V  +G   
Sbjct: 57  CFGKNSFGQLGLGH--TENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNS 114

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG             T    P  +       +   +AG  H+A + ENG VY++G  
Sbjct: 115 DGQLGQ-------SVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSN 167

Query: 266 AVDKM-LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
           +  ++ L    + +   S+ + +P +  V+   CG  HT  +T  G+LYT G  E G LG
Sbjct: 168 SDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLG 227

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTF 380
                         G +S S VD     IV VSCG  HT A+++ GK+            
Sbjct: 228 -------------HGLWSLSRVDTT-EKIVKVSCGANHTIALNDAGKVFVC--------- 264

Query: 381 SEDGHSSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 426
              G++  GQ+G  N     +++P  +    N   +Q+ CG +H+  +
Sbjct: 265 ---GNNDCGQIGLRNVTSQGHLYPCPIT---NEPIVQIVCGQSHSAFI 306



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 23/140 (16%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           E+ CG  H+ ++   G ++ +G N  G LG+G  + ++ P  V+   S  P       + 
Sbjct: 38  EISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVK---SLKP-----DKVK 89

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH---PTIVNFG 408
            ++CG  HT   +E  I+ +G+G +          S GQLG     D  H   P  V   
Sbjct: 90  HIACGRSHTIVSTENNIV-YGFGDN----------SDGQLGQS-VADVTHSDVPIEVTRF 137

Query: 409 ENVKALQVSCGFNHTGALLE 428
            +   +Q+S G  HT ALLE
Sbjct: 138 NDKNIIQLSAGSYHTAALLE 157


>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
           musculus]
 gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 746

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 166/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 265 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 307

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 308 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 351

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 352 GLLYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 42/254 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYH 239

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQV 416
           +A ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV
Sbjct: 240 SAFVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQV 286

Query: 417 SCGFNHTGALLEYV 430
           +CG  HT  L E V
Sbjct: 287 ACGGGHTVVLTEKV 300



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 41/199 (20%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E         + 
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPE--------KVK 128

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGE 409
           L +CG  HT       +++   GG +      G ++ GQLG G  +D D  H  IV F  
Sbjct: 129 LAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTP 176

Query: 410 NVKALQVSCGFNHTGALLE 428
                Q+S G N + AL E
Sbjct: 177 ADTIKQLSAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN +G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+   V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++      + ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI------TTLNGI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 188/395 (47%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDF 100
            +WG  D  +LG G   S+ +  V S F          GG+ +LF+ +  G +YA G    
Sbjct: 2059 VWGLNDKDQLG-GMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTN 2117

Query: 101  GQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
            G+LG+  S N+ Y   P  I  L + V++   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2118 GRLGLGHSNNVPY---PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 2174

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 2175 GHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 2230

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+LIK L G ++   A G     +  + + G V+ +GD    K+   
Sbjct: 2231 -------NITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG 2283

Query: 274  EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  I +L   E  ++ CG   +  LT  GE++TWG  +   LG GS   +  P
Sbjct: 2284 GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP 2343

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              +     ES  D+    ++ V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 2344 TVI-----ESLKDK---KVIHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQ 2383

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G+G  +    P +V+  E+V   +V+CG +H+ A
Sbjct: 2384 QGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIA 2418



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 179/397 (45%), Gaps = 52/397 (13%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G VYATG    
Sbjct: 3036 WGHNHRGQLGGIEGAKVKIPTPCEALS--TLRPVQLVGGEQTLFAVTADGKVYATGYGAG 3093

Query: 101  GQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI       +   LE ++   +KK  + +++G  H  A++ D ++Y WG+  +G+LG
Sbjct: 3094 GRLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLG 3151

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G + A     P  +E L G      A G   S A+T  G++ +WG G  GRLGHG    
Sbjct: 3152 HGNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD--- 3206

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+LI+EL G KV   A  +G   + CI ++  V+ +GD    K+    
Sbjct: 3207 ------SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 3260

Query: 275  GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ + +  P+
Sbjct: 3261 SDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPK 3320

Query: 333  RV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 388
            +V   QG             I+ ++ G  H  A S EG++ TW            G +  
Sbjct: 3321 KVAALQG-----------KKIISIATGSLHCVACSDEGEVFTW------------GDNDE 3357

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            GQLG         P +V+  +  K   V+CG  HT A
Sbjct: 3358 GQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLA 3394



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 2225

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +NI   L+P  I  L    +VQ++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2226 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 2283

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+ +   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 2284 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 2340

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P +I+ L+  KV   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2341 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 2389

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
               R+P+L+  L   +   V CG  H+   T
Sbjct: 2390 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 165/360 (45%), Gaps = 65/360 (18%)

Query: 90   GC-VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
            GC V+  GLND  QLG          +  +    L P+ I+G  K +  +S         
Sbjct: 2054 GCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSH-------- 2105

Query: 139  TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGG 196
              +G+LY  G+ +NG+LGLG   +  +P P  +  LS    K+ A+  G + ++A+T  G
Sbjct: 2106 --EGKLYACGEGTNGRLGLGH--SNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDG 2161

Query: 197  KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            KV SWG G  G+LGHG   ++           P++I+ L   K++  A G  HSA I  +
Sbjct: 2162 KVFSWGEGEDGKLGHGNRLNL---------DKPKMIEALRSKKIRDIACGSSHSAAITSS 2212

Query: 257  GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTW 312
            G +Y +G     ++   +     +P LI  L      +V CG     T  LT  G +++W
Sbjct: 2213 GELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSW 2272

Query: 313  GSNENGCLGIGS---IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
            G  + G LG G     ++ H+ ER+               +V + CG + + A+++ G++
Sbjct: 2273 GDGDFGKLGRGGSEGCNIPHNIERLNA-----------LEVVQIECGAQFSLALTKTGEV 2321

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             TWG G               +LGHG+D     PT++   ++ K + V+ G  H  A+ +
Sbjct: 2322 WTWGKGDYF------------RLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD 2369



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 138/309 (44%), Gaps = 41/309 (13%)

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            V Q STG   S   TV   +++WG N   QLG G K +KV  +P + + LS ++    A 
Sbjct: 2041 VAQDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAG 2095

Query: 185  GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
            G +    V+  GK+ + G G +GRLG G  +++           PR I  L    +K  A
Sbjct: 2096 GSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVA 2146

Query: 245  --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
              +G  H+  +  +G+V+ +G+    K+      +  +P +I  L   +  ++ CG  H+
Sbjct: 2147 VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206

Query: 301  CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
              +TS GELYTWG  E G LG G       P+ ++          +   IV V+CG +  
Sbjct: 2207 AAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKS--------LVGHRIVQVACGSRDA 2258

Query: 361  ---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
               A   EG + +WG     G F        G+LG G       P  +     ++ +Q+ 
Sbjct: 2259 QTLALTDEGWVFSWG----DGDF--------GKLGRGGSEGCNIPHNIERLNALEVVQIE 2306

Query: 418  CGFNHTGAL 426
            CG   + AL
Sbjct: 2307 CGAQFSLAL 2315



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 126/289 (43%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  IPT  E LS +   Q   G +   AVT  GKV + 
Sbjct: 3031 GTIYGWGHNHRGQLG-GIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3088

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+L          P L++ ++ V +K  A  +G  H   +  +  V
Sbjct: 3089 GYGAGGRLGIGGTDSVL---------VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3139

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+          P LI  L   E  ++ CGG H+  +TS G+LYTWG    
Sbjct: 3140 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY 3199

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P+ ++       +D  C S      G   T  I++   + W WG   
Sbjct: 3200 GRLGHGDSEDQLKPKLIEELVGYKVIDVACGS------GDAQTLCITDDDNV-WSWG--- 3249

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  +     +  ++V CG   + AL
Sbjct: 3250 -----DGDY--GKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 3291



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 40/234 (17%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A          
Sbjct: 3029 GSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTA------- 3081

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+VY  G  A  ++     +    P+L+  + +       V  GG H   L++  ++
Sbjct: 3082 --DGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3139

Query: 310  YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
            Y+WG  ++G LG G+     +P   E +QG             I+ ++CG  H+AAI S 
Sbjct: 3140 YSWGEGDDGKLGHGNRLACETPKLIEALQG-----------YEIIDIACGGAHSAAITST 3188

Query: 366  GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            G++ TWG G              G+LGHG+  D + P ++      K + V+CG
Sbjct: 3189 GQLYTWGKG------------RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 3230


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 159/333 (47%), Gaps = 45/333 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA G N  G
Sbjct: 58  MFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEG 117

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL 
Sbjct: 118 QLGLGDTEERTTFQL--VSFFTAQHKIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGLA 175

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           ++A   +P     E   G      + G+  S  VT  G++ ++G   +G+LG       L
Sbjct: 176 EEANVCVP----SEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKLG-------L 224

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
              +  +   P+L+  + G KV   A G  H+  + E   VY      FG   +   +F+
Sbjct: 225 SPEQLKNHRIPQLVLGIPG-KVNQVACGGGHTVALTEE-EVYTFGLGQFGQLGLGTFIFE 282

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                  P ++  L     + + CG  HT +++  G +YT+G   +G LG+G        
Sbjct: 283 ----TSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLG-------- 330

Query: 332 ERVQGPFSESPVDQICTS-----IVLVSCGWKH 359
              Q  F+   V  +C++     + LV+CG  H
Sbjct: 331 ---QENFTNQFVPTLCSNFLKFIVRLVACGGCH 360



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 166/349 (47%), Gaps = 42/349 (12%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAI 138
           G     + ++G V+      FG+   +ENI           LK ++   +S G  H++ I
Sbjct: 2   GEPEELVPDSGAVFT-----FGKSKFAENIPSKF------WLKNDIPAYLSCGDEHTALI 50

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           T + +LYM+G N+ GQLGLG K    +  PT V+ L     K AA G   ++  T  GKV
Sbjct: 51  TGNSKLYMFGSNNWGQLGLGSKT--TVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKV 108

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            + G    G+LG G       F +  S +T +        K+K  +AG   SA + E+G 
Sbjct: 109 YAAGGNSEGQLGLGDTEERTTF-QLVSFFTAQH-------KIKQLSAGSNTSAALTEDGV 160

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++++GD +  ++   E  +   PS ++       + CG YH+  +T+ GELYT+G  ENG
Sbjct: 161 LFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENG 220

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
            LG+       SPE+++       V  I   +  V+CG  HT A++E ++ T+G G    
Sbjct: 221 KLGL-------SPEQLKNHRIPQLVLGIPGKVNQVACGGGHTVALTEEEVYTFGLG---- 269

Query: 379 TFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     GQLG G  + +   P +V   +N K   ++CG NHT  +
Sbjct: 270 --------QFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALI 310



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 166/356 (46%), Gaps = 50/356 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      + +P  +  LK E V+I+  G +H
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKIAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T +G++Y  G NS GQLGLG    +     T  + +S  FT     KQ + G   S
Sbjct: 99  TLVYTEEGKVYAAGGNSEGQLGLGDTEER-----TTFQLVS-FFTAQHKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G +  WG    G++G  +E+++       SE T        G  +   + G+ H
Sbjct: 153 AALTEDGVLFMWGDNSEGQIGLAEEANVC----VPSEVTI-------GKPISWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +   G +Y FG+    K+     Q  NH R P L+  +P    +V CGG HT  LT 
Sbjct: 202 SAFVTTEGELYTFGEPENGKLGLSPEQLKNH-RIPQLVLGIPGKVNQVACGGGHTVALTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
             E+YT+G  + G LG+G+     S  +V               I  ++CG  HTA IS+
Sbjct: 261 E-EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQ-------KIQYIACGENHTALISD 312

Query: 366 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 419
            G + T+G  G HG            LG  N  +   PT+  NF + +  L V+CG
Sbjct: 313 TGHMYTFG-DGRHGKLG---------LGQENFTNQFVPTLCSNFLKFIVRL-VACG 357



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 107/250 (42%), Gaps = 38/250 (15%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  +TG  K+  +G+   G+LG G ++++           P  +K L+  KVKIAA
Sbjct: 43  GDEHTALITGNSKLYMFGSNNWGQLGLGSKTTV---------NKPTCVKALKPEKVKIAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTC 301
            G  H+    E G+VY  G  +  ++   +        L+S        +++  G   + 
Sbjct: 94  CGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSA 153

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            LT  G L+ WG N  G +G+     +  P  V           I   I  +SCG+ H+A
Sbjct: 154 ALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVT----------IGKPISWISCGYYHSA 203

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSC 418
            ++ EG++ T+G                G+LG   +    H  P +V  G   K  QV+C
Sbjct: 204 FVTTEGELYTFG------------EPENGKLGLSPEQLKNHRIPQLV-LGIPGKVNQVAC 250

Query: 419 GFNHTGALLE 428
           G  HT AL E
Sbjct: 251 GGGHTVALTE 260



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F K  ++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVF 364


>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
          Length = 590

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +         IK+L        +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVFFTPADTIKQL--------SAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 265 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 307

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 308 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 351

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 352 GLLYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 38/252 (15%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
            G  H+    + G VY  G     ++ L    +      ++   P    +++  G   + 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H+A
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYHSA 241

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSC 418
            ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV+C
Sbjct: 242 FVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVAC 288

Query: 419 GFNHTGALLEYV 430
           G  HT  L E V
Sbjct: 289 GGGHTVVLTEKV 300



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 41/208 (19%)

Query: 230 RLIKELEGVKVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           R+   +   + +I  AGF      + + + G V+ FG     K  F E       ++ SK
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSK 67

Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +  ++     CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E  
Sbjct: 68  FWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPE-- 125

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYI 400
                  + L +CG  HT       +++   GG +      G ++ GQLG G  +D D  
Sbjct: 126 ------KVKLAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTF 168

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLE 428
           H  IV F       Q+S G N + AL E
Sbjct: 169 H-QIVFFTPADTIKQLSAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 178/398 (44%), Gaps = 74/398 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG G  E+R  P   +    H+L +       +  L+ T           GQ
Sbjct: 52  WGRGSSGQLGGGIEETRLYPSPVANL--HALPS-------SFSLSPTP----------GQ 92

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           L I +N   ++        K+E ++  IS G  HS A+ VDG +++WGK   G+LG G +
Sbjct: 93  LLI-KNQNSTIT-------KQEAIEVGISCGLFHS-ALLVDGNIWIWGKGDGGRLGFGHE 143

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +PT    L     K  ALG   SVA+T  G+V +WG GG G LGH         
Sbjct: 144 --NPVFVPTLNPNLDP--AKCVALGGVHSVALTSLGQVFTWGYGGFGALGH--------- 190

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------Q 273
                E  PRL++ +   K++  A    H+A I E G VY +G    D  L         
Sbjct: 191 CVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPN 250

Query: 274 EGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           EG     PS +  L      V CGG+ T VLT  G+++ WG+N N  LG G+        
Sbjct: 251 EGGGLSIPSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGN-------- 302

Query: 333 RVQGPFSESPVDQI--CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
              G +   P+  +     I + S G+   A   EGK+L+WG+GG             GQ
Sbjct: 303 -KTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGH------------GQ 349

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           LGH +  +   P +++   + + + ++CG + + A+ +
Sbjct: 350 LGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITD 387



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 25/291 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G     + P +    +    K +A GG H++ LT  G V+  G   FG
Sbjct: 129 IWGKGDGGRLGFGHENPVFVPTLNPNLDP--AKCVALGGVHSVALTSLGQVFTWGYGGFG 186

Query: 102 QLGISENIGYSLE--PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LG   +  Y  E  P  + G+  E ++ I+T   H++AIT  GE+Y WG++        
Sbjct: 187 ALG---HCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGL 243

Query: 159 KKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
                      + IP+KV+ L+         GF  +V +T  G++ +WGA  +  LG G 
Sbjct: 244 GPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGFFTAV-LTEEGQIWNWGANSNYELGRGN 302

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +         T  + P+ I  LEGV+V   A+G  HS  + + G+V  +G     ++   
Sbjct: 303 K---------TGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHP 353

Query: 274 EGNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI 322
              + + P +I  L     V   CGG  +  +T  G+LY WG+ ++  LG+
Sbjct: 354 SIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGV 404



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 20/246 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG G +G LG         P +        ++ +A  G HT  +TETG VY  G ++   
Sbjct: 180 WGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDG 239

Query: 100 ----FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                   G +E  G S+ P ++  L   V  +  G   ++ +T +G+++ WG NSN +L
Sbjct: 240 RLGLGPGRGPNEGGGLSI-PSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYEL 298

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G K     P P  +  L G+   Q A G   S+A+T  GKVLSWG GG G+LGH    
Sbjct: 299 GRGNKTGGWQPKP--IPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGH---P 353

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           SI       ++  P +I  L   +V   A G   SA I + G++Y++G+ A D  L   G
Sbjct: 354 SI------QNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGN-AKDSQLGVPG 406

Query: 276 NHARRP 281
               +P
Sbjct: 407 LPEVQP 412



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 3/133 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG      LG G+    W+P      E   +  +A GG H+L LT+ G V + G    GQ
Sbjct: 290 WGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQ 349

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +I     P+ I  L  + VV I+ G   S+AIT +G+LYMWG   + QLG+    
Sbjct: 350 LG-HPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGV-PGL 407

Query: 162 AKVIPIPTKVECL 174
            +V P P +V  L
Sbjct: 408 PEVQPCPVEVVFL 420



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 30/196 (15%)

Query: 197 KVLSWGAGGSGRLGHGQESSIL--------GFLRSTSEYTP-----------RLIKELEG 237
           ++LSWG G SG+LG G E + L          L S+   +P             I + E 
Sbjct: 48  QLLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEA 107

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           ++V I+  G  HSA +  +G ++I+G     ++ F   N    P+L   L  ++ V  GG
Sbjct: 108 IEVGISC-GLFHSALL-VDGNIWIWGKGDGGRLGFGHENPVFVPTLNPNLDPAKCVALGG 165

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            H+  LTS G+++TWG    G LG         P  VQG  S   +  I TS        
Sbjct: 166 VHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQG-ISNEKIRHIATS-------G 217

Query: 358 KHTAAISE-GKILTWG 372
            HTAAI+E G++ TWG
Sbjct: 218 THTAAITETGEVYTWG 233


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN +G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+   V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++      + ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI------TTLNGI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|74190775|dbj|BAE28179.1| unnamed protein product [Mus musculus]
          Length = 370

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 158/355 (44%), Gaps = 40/355 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E  + P   S F +   +K++  GG H+  +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G V  WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE      A AG  HSA + + G +Y++G R     L   
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247

Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                 P  I    + +E V     G  H    T  G+++TWG  + G LG      L  
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303

Query: 331 PE-----------RVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISEGKILTWGW 373
           PE             QGP +  P    C T    +SCG +H  A+   K  +WGW
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW 358



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 35/295 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           ++A G N +GQLG+       L P ++S   +   +  ++ G  HS+ +T  G+L++ G 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G+L
Sbjct: 76  NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133

Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
           G  HG    ++          P+ I+ L   KV   AAG  H+      G V+ +G    
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182

Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
           +  + L    N      A+ PS ++ L  S  V  V G  H+  LT  GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            L   ++  L  P+R++  + +         +  V  GW H  A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQD------EKVTAVWSGWTHLVAKTETGKVFTWG 290



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 131/301 (43%), Gaps = 36/301 (11%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LGLG  E   R  +C       ++ +ACG   T+ LTE G V + G N FGQLG+   
Sbjct: 79  GQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG---KNSNGQLGLGKKAAKVI 165
               + P  I  L+++VV ++ G  H+ A T  G ++ WG    +S  +L  G+     +
Sbjct: 139 PRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFL 198

Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P++V  L       A  G + S ++T  G++  W     GR  HGQ +S   FL  
Sbjct: 199 TAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVW-----GRNKHGQLASRAVFLP- 252

Query: 224 TSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG----------------DR 265
                P+ I+    +  KV    +G+ H     E G+V+ +G                 +
Sbjct: 253 ----LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308

Query: 266 AV--DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            V  D  L  +G     PS +  L  + E+ CG  H   +    +  +WG NE+G  G G
Sbjct: 309 PVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIR-DKCCSWGWNEHGMCGDG 367

Query: 324 S 324
           +
Sbjct: 368 T 368



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 32/250 (12%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S  ++    L+ WG NS GQLGLG K    +P      C +G   K    G   S  VT 
Sbjct: 8   SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           GG +   G    G+LG G    +L F          + K L G  ++  A G+  +  + 
Sbjct: 67  GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117

Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
           E G+V   G  A  ++    G      P  I  L   E+VVC   G  H    T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175

Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            WG     S    C G  +        P RV G  +        ++ V    G  H+A++
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLEN--------STAVCAVAGSDHSASL 227

Query: 364 SE-GKILTWG 372
           ++ G++  WG
Sbjct: 228 TDTGELYVWG 237



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 24/174 (13%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P   +  E  +      G  H+  LT+TG +Y  G N  GQL  S  +   L P RI  
Sbjct: 202 EPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPL-PQRIEA 259

Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GKKAAKVIP-------- 166
                ++V  + +G+ H  A T  G+++ WG+   GQLG      +A K +         
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQ 319

Query: 167 -----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                +P+ + CL+G    + + G E ++AV    K  SWG    G  G G ES
Sbjct: 320 GPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTES 370


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 180/384 (46%), Gaps = 54/384 (14%)

Query: 57  ESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +SR+   + S F      +K ++CG  HT  + ++G V+  G NDFGQLG   +     +
Sbjct: 20  KSRFAEDLSSHFFVRNDPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFG-HTKIVNK 78

Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKV 171
           P  +  LK  + + ++ G  H+   T   +++ +G NS+GQLG+G    + +P  I T +
Sbjct: 79  PSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDL 138

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           E  + I    A  G   S  +T  G V  WG    G+ G   E+ +L          PR 
Sbjct: 139 EKTNNIIALSA--GCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLN---------PRK 187

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           I E +   +   + G+ H+A I   G+VY FG+    K+        R   L + +P   
Sbjct: 188 I-EFQN-PINSISCGYYHTAFISL-GKVYTFGEDDNGKL-------GRSDKLPNDVPEGV 237

Query: 292 E-------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPV 343
           E       V CGG HT +LT  G+ Y +GSN +G LG+G+ +   S P+RV   F++  V
Sbjct: 238 ELDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVN--FTDENV 295

Query: 344 DQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           +     ++ V+CG  H+A ++ EGK+ T G G +    +ED  +           +   P
Sbjct: 296 N-----LIYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDEST-----------NICTP 339

Query: 403 TIVNFGENVKALQVSCGFNHTGAL 426
           T +   ++     VSCG  HT  L
Sbjct: 340 TTIEMFKSFFCTYVSCGGCHTMVL 363



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 49/348 (14%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + +TG V+  G + F +  +S +     +P++         +IS G  H++ +   G ++
Sbjct: 9   IPDTGAVFTFGKSRFAE-DLSSHFFVRNDPVK---------EISCGDEHTALVCKSGRVF 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           ++GKN  GQLG G    K++  P+ ++ L    +   A G   ++  T   K+ ++G   
Sbjct: 59  LFGKNDFGQLGFGH--TKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNS 116

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFG 263
            G+LG G              + P++I  +LE     IA +AG  HSA + E G VYI+G
Sbjct: 117 DGQLGVGD---------LDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWG 167

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +  +   +  N+   P  I        + CG YHT  + S G++YT+G ++NG LG  
Sbjct: 168 DNSDGQCGIKNENYLLNPRKIEFQNPINSISCGYYHTAFI-SLGKVYTFGEDDNGKLGRS 226

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
                  PE V+       +D+ C S   V CG  HT  ++E GK   +G   S      
Sbjct: 227 DKLPNDVPEGVE-------LDENCIS---VKCGGSHTIILTESGKAYAFGSNFS------ 270

Query: 383 DGHSSGGQLGHGN-DVDYIHPTIVNF-GENVKALQVSCGFNHTGALLE 428
                 GQLG GN + ++  P  VNF  ENV  + V+CG +H+  L +
Sbjct: 271 ------GQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTD 312



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 142/286 (49%), Gaps = 25/286 (8%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRP-VVCSAFEK-HSLKALACGGAHTLFLTE 88
           IS+   + FA  +G    G+LG+G L+ RW P ++ +  EK +++ AL+ G  H+ FLTE
Sbjct: 102 ISTECNKIFA--FGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTE 159

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            G VY  G N  GQ GI +N  Y L P +I   +  +  IS GY+H++ I++ G++Y +G
Sbjct: 160 EGSVYIWGDNSDGQCGI-KNENYLLNPRKIE-FQNPINSISCGYYHTAFISL-GKVYTFG 216

Query: 149 KNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           ++ NG+LG   K    +P  +     C+S         G   ++ +T  GK  ++G+  S
Sbjct: 217 EDDNGKLGRSDKLPNDVPEGVELDENCIS------VKCGGSHTIILTESGKAYAFGSNFS 270

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG       LG   +      R+    E V +     G  HSA + + G++Y  GD  
Sbjct: 271 GQLG-------LGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGR 323

Query: 267 VDKMLFQ-EGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGEL 309
             K+  + E  +   P+ I   K  +   V CGG HT VL    +L
Sbjct: 324 NGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKALKL 369



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 154/346 (44%), Gaps = 59/346 (17%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           L+G  D+G+LG G  +   +P    + +      +ACG +HTL  TE   ++A G N  G
Sbjct: 59  LFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDG 118

Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+ +     +  +  + L+K   ++ +S G HHS+ +T +G +Y+WG NS+GQ G+  
Sbjct: 119 QLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNSDGQCGI-- 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    +  P K+E  + I     + G+  + A    GKV ++G   +G+LG         
Sbjct: 177 KNENYLLNPRKIEFQNPI--NSISCGYYHT-AFISLGKVYTFGEDDNGKLGR-------- 225

Query: 220 FLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S+  P  +    EL+   + +   G  H+  + E+G+ Y FG     ++    GN
Sbjct: 226 -----SDKLPNDVPEGVELDENCISVKCGG-SHTIILTESGKAYAFGSNFSGQLGL--GN 277

Query: 277 HARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                S+  ++ +++E      V CG  H+  LT  G+LYT G   NG L          
Sbjct: 278 FETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGKLC--------- 328

Query: 331 PERVQGPFSESPVDQICTSIVL----------VSCGWKHTAAISEG 366
                   +E     ICT   +          VSCG  HT  +++ 
Sbjct: 329 --------NEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKA 366


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 185/401 (46%), Gaps = 52/401 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 4382 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4439

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      +    +E L+   +KK  V +++G  H  A++ DGE++ WG+  +G+LG
Sbjct: 4440 GRLGIGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG    
Sbjct: 4498 HGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD--- 4552

Query: 217  ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+    
Sbjct: 4553 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4606

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P+
Sbjct: 4607 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4666

Query: 333  RV---QGPFSESPVDQICTSIVLVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSG 388
            +V   QG             I+ ++ G  H  A S+G ++ TWG             +  
Sbjct: 4667 KVAALQG-----------KKIISIATGSLHCVACSDGGEVFTWG------------DNDE 4703

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
            GQLG G       P +V   +    ++V CG  HT AL  Y
Sbjct: 4704 GQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4744



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 135/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +        ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3352 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3411

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L    VVQ++ G   +    +T +G ++ WG    G+LG G 
Sbjct: 3412 LGHGDNC-TQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3469

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP +VE L+G+   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3470 -GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV-- 3526

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P  I+ L G KV   A G LH   + ++G+VY +GD   D      GN   
Sbjct: 3527 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTIV 3577

Query: 279  -RRPSLISKLP--YSEEVVCGGYHT 300
             ++PSL+  L   +   V CG  H+
Sbjct: 3578 NKKPSLVLGLDGIFVNRVACGSSHS 3602



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 3245 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3301

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 3302 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3360

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3361 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3416

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L   +V   A G     + C+ E G V+ +GD    K+   
Sbjct: 3417 -------NCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3469

Query: 274  EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3470 GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3529

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              +QG   +         ++ V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3530 TPIQGLRGK--------KVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQ 3569

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G GN +    P++V   + +   +V+CG +H+ A
Sbjct: 3570 QGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVA 3604



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 161/353 (45%), Gaps = 64/353 (18%)

Query: 96   GLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
            GLND  QLG             ++   L+P+ I+G  K +  +S           DG+LY
Sbjct: 3247 GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQ----------DGKLY 3296

Query: 146  MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGA 203
              G+ +NG+LGLG      +P P +V  LS    K+ A+  G + ++A+T  GKV SWG 
Sbjct: 3297 ACGEGTNGRLGLGHN--NNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3354

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G  G+LGHG         R T E  P+LI+ L   +++  A G  HSA I  +G +Y +G
Sbjct: 3355 GEDGKLGHGN--------RLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3405

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGC 319
                 ++   +     +P L++ L      +V CG     T  LT  G +++WG  + G 
Sbjct: 3406 LGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3465

Query: 320  LGIGSID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGG 375
            LG G  +   + H  ER+ G             ++ + CG + + A+++ G++ TWG G 
Sbjct: 3466 LGRGGSEGCSIPHQVERLNG-----------VGVMQIECGAQFSLALTKSGEVWTWGKGD 3514

Query: 376  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +            +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3515 YY------------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3555



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 16/247 (6%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
           A  C G H L LT TG V++ G  + G+LG  +     + P RI  L +++V  +  G  
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDI-PTRIVALAERQVTGVFCGSS 692

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
           +S+AIT  GELY WG+ + G+LG G    K   +PT V+ L        ALG     S+ 
Sbjct: 693 YSAAITAAGELYTWGRGTYGRLGHGNSEDK--HLPTIVQVLKQQRVIHVALGCGDAHSLC 750

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G V +WG G  G+LG+G  +       S+      L +  +G     + + F  S 
Sbjct: 751 VTDTGIVYAWGDGDFGKLGNGTCNG------SSVPVAIELPQCSDGAVKVFSGSHF--SV 802

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +  +G VY +G     ++      H   P  I  L      ++  G  H   LT+ GEL
Sbjct: 803 ALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGEL 862

Query: 310 YTWGSNE 316
           Y WG N+
Sbjct: 863 YGWGRND 869



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 125/294 (42%), Gaps = 38/294 (12%)

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            +  ++ +WG N   QLG G K +KV  +PT    LS +     A G +    V+  GK+ 
Sbjct: 3239 LSSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3296

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENG 257
            + G G +GRLG G  +++          TP+ +  L    VK  A  +G  H+  +  +G
Sbjct: 3297 ACGEGTNGRLGLGHNNNV---------PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3347

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
            +V+ +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  
Sbjct: 3348 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3407

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI---SEGKILTWG 372
            E G LG G       P+ V               +V V+CG +    +    EG + +WG
Sbjct: 3408 EYGRLGHGDNCTQLKPKLVTALADH--------RVVQVACGSRDAQTLCLTEEGLVFSWG 3459

Query: 373  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 G F        G+LG G       P  V     V  +Q+ CG   + AL
Sbjct: 3460 ----DGDF--------GKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLAL 3501



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 139/311 (44%), Gaps = 37/311 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           ++ +AC       LT TG V +   ++        +   +  P  I GL+   +VQ++  
Sbjct: 584 VRQVACSETSIYILTTTGQVLSLQHSNC-------HTPDTTAPKPIEGLESVNIVQLAAH 636

Query: 132 Y--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
               H  A+T  G+++ WG    G+LG G  ++K   IPT++  L+         G   S
Sbjct: 637 CEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSK--DIPTRIVALAERQVTGVFCGSSYS 694

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
            A+T  G++ +WG G  GRLGHG          S  ++ P +++ L+  +V   A   G 
Sbjct: 695 AAITAAGELYTWGRGTYGRLGHGN---------SEDKHLPTIVQVLKQQRVIHVALGCGD 745

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVL 303
            HS C+ + G VY +GD    K+     N +  P  I +LP   +    V  G + +  L
Sbjct: 746 AHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAI-ELPQCSDGAVKVFSGSHFSVAL 804

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
              G +Y+WG    G LG G  +   SP+ +Q    ++ VD        ++ G  H  A+
Sbjct: 805 GRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVD--------LAVGLAHCLAL 856

Query: 364 SEGKILTWGWG 374
           +    L +GWG
Sbjct: 857 TASGEL-YGWG 866



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 20/227 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNG+ GRLG G   S+  P    A  +  +  + CG +++  +T  G +Y  G   +G+
Sbjct: 654 WGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGR 713

Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   +    L P  +  LK++    V +  G  HS  +T  G +Y WG    G+LG G 
Sbjct: 714 LGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGT 772

Query: 160 KAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +P+  ++ +C  G     +   F  SVA+   G V SWG                
Sbjct: 773 CNGSSVPVAIELPQCSDGAVKVFSGSHF--SVALGRDGTVYSWGK-----------GHGG 819

Query: 219 GFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 SE+T  P+ I+ LEG  +   A G  H   +  +G +Y +G
Sbjct: 820 RLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWG 866



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 43/213 (20%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           STS Y+   I+   GV+V+         AC + +  +YI       ++L  + ++   P 
Sbjct: 567 STSRYSTATIELPAGVQVR-------QVACSETS--IYIL--TTTGQVLSLQHSNCHTPD 615

Query: 283 LISKLPY----SEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             +  P     S  +V     C G H   LT+ G++++WG+ E G LG G       P R
Sbjct: 616 TTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTR 675

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           +        V      +  V CG  ++AAI+  G++ TWG     GT+        G+LG
Sbjct: 676 I--------VALAERQVTGVFCGSSYSAAITAAGELYTWG----RGTY--------GRLG 715

Query: 393 HGNDVDYIHPTIVNFGENVKALQVS--CGFNHT 423
           HGN  D   PTIV   +  + + V+  CG  H+
Sbjct: 716 HGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHS 748



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH-TLFLTETGCVYA--TGLND 99
           WG+GD+G+LG G+      PV     +          G+H ++ L   G VY+   G   
Sbjct: 760 WGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGG 819

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
               G SE   ++  P  I  L+ K +V ++ G  H  A+T  GELY WG+N   QL
Sbjct: 820 RLGHGHSE---HTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 26/209 (12%)

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           +E  +G+  +Q A        +T  G+VLS        L H           +     P+
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLS--------LQHSN-------CHTPDTTAPK 620

Query: 231 LIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
            I+ LE V +   AA     H   +   G V+ +G+    ++   + +    P+ I  L 
Sbjct: 621 PIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALA 680

Query: 289 YSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
             +   V CG  ++  +T+ GELYTWG    G LG G+ +  H P  VQ       + Q 
Sbjct: 681 ERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQV------LKQQ 734

Query: 347 CTSIVLVSCGWKHTAAISE-GKILTWGWG 374
               V + CG  H+  +++ G +  WG G
Sbjct: 735 RVIHVALGCGDAHSLCVTDTGIVYAWGDG 763


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 180/413 (43%), Gaps = 62/413 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G  E        +A +  ++ A+  G  ++L +   G ++  G N  G 
Sbjct: 16  WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
           LG          P  +  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 76  LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAER 135

Query: 158 ---GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
              G +A  + IPIP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 136 KEDGTRALRRDIPIPQR--CAPKLKVRQVAAGGTHSVVLTQDGHVWTWG----------- 182

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S  TP  ++ LE   VK+ A G  H+  + E+G ++ +G+    ++   
Sbjct: 183 QPWPPGDIKQIS--TPVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G     H  
Sbjct: 239 DTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV 298

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V+    E         I+ VSCG  H+ A++ +G++ ++G  G H           G
Sbjct: 299 PQKVELLAGE--------DIIQVSCGGTHSVALTRDGRMFSYG-RGDH-----------G 338

Query: 390 QLGHGNDVDYIHPTIV------------NFGENVKALQVSCGFNHTGALLEYV 430
           +LG+G  V   HP  V            + G   +A  V+CG  HT A+  + 
Sbjct: 339 RLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIATWT 391



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 147/340 (43%), Gaps = 32/340 (9%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLR--ISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            V A G  + GQLG+    GY  E     ++ L    V  +  G  +S AI  DG L+ W
Sbjct: 12  AVLAWGSGEDGQLGMG---GYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTW 68

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N  G LG   +  K    P  V+ L+G+   QAA+G    +AV   G+  +WG    G
Sbjct: 69  GWNQRGTLGHPPET-KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYG 127

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G   E    G  R+     P   +    +KV+  AAG  HS  + ++G V+ +G    
Sbjct: 128 QCGEEAERKEDG-TRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP 186

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              + Q       P  +  L   + +  G +H   LT  G L+ WG+NE G LG G    
Sbjct: 187 PGDIKQ----ISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQP 242

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
              P RV+G    S VD       + + GW  TA   EG++  WG  G H          
Sbjct: 243 RSQPIRVEGLSDLSLVD-------IAAGGWHSTALTKEGEVYAWG-RGEH---------- 284

Query: 388 GGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LG G+D   ++ P  V        +QVSCG  H+ AL
Sbjct: 285 -GRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVAL 323


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 178/380 (46%), Gaps = 45/380 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P + ++ +   ++ ++CG  H   +T+ G V++ G  D G+LG   ++G  L P  I  L
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV-LHPKIIESL 317

Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFT 179
               V  I+ G  H+ A+ + GEL+ WG+ ++       +  +    P K+   L G+  
Sbjct: 318 AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSV 377

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            + A G   +  ++  G++ ++G G  G LGHG  SS+           P+ ++ L+G++
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVA---------RPKEVESLKGLR 428

Query: 240 VKIAAAGFLHSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           VK  A G  H+A I E          +G+++ +GD    K+   +      P+ +  L  
Sbjct: 429 VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 488

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
           S+  +V C    T  LT  G ++T GS E+G LG   +D   S   V+GP     V +I 
Sbjct: 489 SDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD-SSICSVEGPLKTEFVREI- 546

Query: 348 TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
                 S G  H A ++  GK+ TWG G            + GQLG GN VD   PT+V 
Sbjct: 547 ------SSGSSHVAVLTMNGKVFTWGKG------------TEGQLGLGNYVDRSSPTLVE 588

Query: 407 FGENVKALQVSCGFNHTGAL 426
             E+ +   ++CG N T A+
Sbjct: 589 ALEDKQVDSIACGSNFTVAV 608



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D GRLG         P +  +     +KA+A G  HT  L  +G ++  G      
Sbjct: 292 WGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS- 350

Query: 103 LGISENIGYSLE--PLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG+ ++     +  P ++ G  +   VV+++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 351 LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG 410

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
             ++  +  P +VE L G+  K  A G   + A+             GK+ +WG    G+
Sbjct: 411 DTSS--VARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 468

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH  + S L          P  +K L        +     +  +   G V+  G +   
Sbjct: 469 LGHSDKESKL---------VPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 519

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    G+H    S I       K  +  E+  G  H  VLT  G+++TWG    G LG+
Sbjct: 520 QL----GSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGL 575

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G+     SP  V+    +  VD I       +CG   T A+
Sbjct: 576 GNYVDRSSPTLVEA-LEDKQVDSI-------ACGSNFTVAV 608



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 140/346 (40%), Gaps = 53/346 (15%)

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           N F  L +++ I    +   I+ + K  ++ S G H +       ++++WG      L  
Sbjct: 195 NSFQDLTVADTI----KEQGITQMPK--LKPSEGSHVAYGTDSLKDIFVWGDVLGSVLDD 248

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              +   + +P  +     +  +  + G + +  VT  G+V SWG    GRLGH     +
Sbjct: 249 RDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV 308

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           L          P++I+ L    VK  A G  H+  +  +G ++ +G+     +   +   
Sbjct: 309 LH---------PKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGE-GTHSLGVWDDQC 358

Query: 278 ARRPSLISKL--PYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            R      KL  P       ++ CG +HT +++S G+L+T+G    G LG G    +  P
Sbjct: 359 QRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP 418

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-----------GKILTWGWGGSHGTF 380
           + V+              +  V+CG  HTAAI E           GK+ TW         
Sbjct: 419 KEVESLKG--------LRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW--------- 461

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              G +  G+LGH +    + PT V    +    QVSC    T AL
Sbjct: 462 ---GDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVAL 504



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PRL+   + + V+  + G  H+A + + G V+ +G     ++  +       P +I  L 
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA 318

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPV 343
           ++  + +  G  HTC L   GEL+ WG   +  LG+       S   P ++ GP      
Sbjct: 319 FTHVKAIAFGAKHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEG--- 374

Query: 344 DQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                S+V ++CG  HTA IS  G++ T+G     GTF        G LGHG+      P
Sbjct: 375 ----VSVVKMACGQWHTAIISSSGQLFTYG----DGTF--------GVLGHGDTSSVARP 418

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++   V+CG  HT A++E +
Sbjct: 419 KEVESLKGLRVKAVACGPWHTAAIVEIL 446


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 160/343 (46%), Gaps = 29/343 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG +E      P         ++K +ACG  HTLFLT +G VYA G ND 
Sbjct: 10  WGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDH 69

Query: 101 GQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I   L   VVQI+ G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               ++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 127 D-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEV-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ V   A G  HS  I ++  V+ +G     ++   +     
Sbjct: 184 ----THSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRS 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCL--GIGSIDVLHSPERVQ 335
            P+ +  L       V CG   +  LT+ G ++T G+   G L  G G+ ++L  P  V 
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEML--PRMV- 296

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGS 376
                  ++ + ++I  V+CG +HT A+  S G++  +G G S
Sbjct: 297 -------MELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 332



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 133/290 (45%), Gaps = 40/290 (13%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +T   ELY WG  S+GQLGLG    + I  P++V        KQ A G   ++ +T  G+
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V + G+    +LGH   +             P LI EL    V   A G  HS  + E G
Sbjct: 61  VYACGSNDHSQLGHDLPTK-----------RPLLIPELLDYVVVQIACGSRHSMALSEWG 109

Query: 258 RVYIFGD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
           +V  +GD       +A D+ + Q     R+  L+SK     ++ CG  H+  LTS GELY
Sbjct: 110 QVLSWGDNDCGQLGQATDQDIVQLPKIVRQ--LVSKTVV--QIACGNNHSLALTSCGELY 165

Query: 311 TWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
           +WGSN  G LG+ +  +V HS + V+          +   +  ++CG  H+  IS+   +
Sbjct: 166 SWGSNIYGQLGVNTPKEVTHSNQPVRL------TTLLGIPVAAIACGGNHSFIISKSSAV 219

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            +GW          G ++ GQLG  ++    +PT +     +    V+CG
Sbjct: 220 -FGW----------GRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACG 258



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 26/157 (16%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           E      PS +   P S  ++V CG  HT  LTS G +Y  GSN++  LG       H  
Sbjct: 24  EDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDHSQLG-------HDL 76

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              +       +D +   +V ++CG +H+ A+SE G++L+WG             +  GQ
Sbjct: 77  PTKRPLLIPELLDYV---VVQIACGSRHSMALSEWGQVLSWG------------DNDCGQ 121

Query: 391 LGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           LG   D D +  P IV    +   +Q++CG NH+ AL
Sbjct: 122 LGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLAL 158



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL    SR  P          ++ +ACG   ++FLT  G V+  G   +GQ
Sbjct: 222 WGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
           LG        L  + +  +   + Q++ G  H+ A+    G +Y +G  S+GQ  LG ++
Sbjct: 282 LGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGTRS 339

Query: 162 AKVIPIPTKV 171
            K + +P  V
Sbjct: 340 TKSLTLPQVV 349



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 19/127 (14%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           +T+G ELY WG+  +G LG+G I+        Q P++        ++I  V+CG +HT  
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPD------SAIKQVACGHRHTLF 54

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           ++           S G     G +   QLGH  D+    P ++    +   +Q++CG  H
Sbjct: 55  LT-----------SSGRVYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRH 101

Query: 423 TGALLEY 429
           + AL E+
Sbjct: 102 SMALSEW 108


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 184/400 (46%), Gaps = 50/400 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 3942 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 3999

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI      S  P  +  L+  +++   +++G  H  A++ DGE++ WG+  +G+LG 
Sbjct: 4000 GRLGIGGTDSVS-APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4058

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG     
Sbjct: 4059 GNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---- 4112

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4113 -----SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4167

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P++
Sbjct: 4168 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKK 4227

Query: 334  V---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 389
            V   QG             I+ ++ G  H  A S+ G++ TWG             +  G
Sbjct: 4228 VAALQG-----------KKIISIATGSLHCVACSDSGEVFTWG------------DNDEG 4264

Query: 390  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
            QLG G       P +V   +    ++V CG  HT AL  Y
Sbjct: 4265 QLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4304



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 187/395 (47%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 2896 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 2952

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2953 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3011

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3012 GHGNRL--TLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3067

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L+G +V   A G     + C+ E G V+ +GD    K+   
Sbjct: 3068 -------NCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3120

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3121 GSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3180

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              +QG   +         ++ V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3181 TPIQGLRGKK--------VIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQ 3220

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G GN V    P +V   + V   +V+CG +H+ A
Sbjct: 3221 QGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVA 3255



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 143/327 (43%), Gaps = 25/327 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H + LT  G V++ G  + G
Sbjct: 2950 GEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3009

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    +      L  S   K V  I+ G  HS+AIT  GELY WG    G+LG G   
Sbjct: 3010 KLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNC 3069

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  V  L G    Q A G    Q++ +T  G V SWG G  G+LG G       
Sbjct: 3070 TQL--KPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG------ 3121

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  ++ L  V V     G   S  + ++G V+ +G     ++      H R
Sbjct: 3122 ---SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3178

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            +P+ I  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V G 
Sbjct: 3179 KPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLG- 3237

Query: 338  FSESPVDQICTSIVLVSCGWKHTAAIS 364
                 +D +  +   V+CG  H+ A S
Sbjct: 3238 -----LDGVFVN--RVACGSSHSVAWS 3257



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 161/357 (45%), Gaps = 64/357 (17%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            V   GLND  QLG             ++   L+P+ I+G  K +  +S           D
Sbjct: 2894 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQ----------D 2943

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG      +P P +V  L+    K+ A+  G + ++A+T  GKV 
Sbjct: 2944 GKLYACGEGTNGRLGLGHN--NNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVF 3001

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG         R T E  P+LI+ L   +V+  A G  HSA I  +G +
Sbjct: 3002 SWGEGEDGKLGHGN--------RLTLE-KPKLIESLRTKRVRDIACGSSHSAAITSSGEL 3052

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L++ L      +V CG     T  LT  G +++WG  
Sbjct: 3053 YTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3112

Query: 316  ENGCLGIGSID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTW 371
            + G LG G  +   V H  ER+               ++ + CG + + A+++ G++ TW
Sbjct: 3113 DFGKLGRGGSEGCSVPHQVERLNS-----------VGVMQIECGAQFSLALTKSGEVWTW 3161

Query: 372  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G G  +            +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3162 GKGDYY------------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3206



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 124/271 (45%), Gaps = 22/271 (8%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
           A  C G H + L+    V++ G  D G+LG  + +     P  I GL +K+V  I  G  
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKE-HPTMIVGLHEKQVCGIYCGAS 630

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
           +S+AIT+ GEL+ WG+ + G+LG G    K+  +PT+V+ L        ALG     S+ 
Sbjct: 631 YSAAITIAGELFTWGRGTYGRLGHGNSDDKL--VPTQVQALKSYKVVDVALGSGDAHSMC 688

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G + +WG G  G+LG+G                P  I  L  V V    +G   S 
Sbjct: 689 VTDNGLLFAWGDGDFGKLGNGS---------CNGSPIPVQIDTL--VNVSRIYSGSQFSV 737

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +  +G +Y +G     ++      H+  P L+  L   +  +V  G  H   LTS GEL
Sbjct: 738 ALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGEL 797

Query: 310 YTWGSNENGCL---GIGSIDVLHSPERVQGP 337
           Y WG N+   +   G+    ++HSP     P
Sbjct: 798 YGWGRNDYQQICPSGVSRDPIIHSPILTTPP 828



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 17/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD GRLG G   S+  P +     +  +  + CG +++  +T  G ++  G   +G+
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGR 651

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N    L P ++  LK  +VV ++  +G  HS  +T +G L+ WG    G+LG G 
Sbjct: 652 LG-HGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNG- 709

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +    PIP +++ L  +   +   G + SVA++  G + +WG G  GRLGHG       
Sbjct: 710 -SCNGSPIPVQIDTLVNV--SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGN------ 760

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              S     P+L++ LEG K+   A G  H   +  +G +Y +G
Sbjct: 761 ---SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWG 801



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 132/309 (42%), Gaps = 41/309 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
           ++ +AC   +   LT  G V++   N       SENI     P    GL+   VVQI+  
Sbjct: 525 VRQVACTENNIYILTTGGQVFSLHSNS------SENIA----PKAFEGLEGVHVVQIAAH 574

Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA---LGF 186
               H   ++   E++ WG    G+LG G   +K  P       + G+  KQ      G 
Sbjct: 575 CEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPT-----MIVGLHEKQVCGIYCGA 629

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
             S A+T  G++ +WG G  GRLGHG          S  +  P  ++ L+  KV   A  
Sbjct: 630 SYSAAITIAGELFTWGRGTYGRLGHGN---------SDDKLVPTQVQALKSYKVVDVALG 680

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
           +G  HS C+ +NG ++ +GD    K+     N +  P  I  L     +  G   +  L+
Sbjct: 681 SGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVSRIYSGSQFSVALS 740

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI- 363
             G LYTWG    G LG G+ +  + P+ V+    +   D        V+ G  H  A+ 
Sbjct: 741 CDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIAD--------VAVGSAHCLALT 792

Query: 364 SEGKILTWG 372
           S G++  WG
Sbjct: 793 SSGELYGWG 801



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 133/309 (43%), Gaps = 45/309 (14%)

Query: 129  STGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
            S+ Y    ++  +  ++ +WG N   QLG G K +KV  +PT    LS +     A G +
Sbjct: 2878 SSNYADDQSLNEISSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSK 2935

Query: 188  QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--A 245
                V+  GK+ + G G +GRLG G  +++          TPR +  L    VK  A  +
Sbjct: 2936 SLFIVSQDGKLYACGEGTNGRLGLGHNNNV---------PTPRQVPILNQYVVKKVAVHS 2986

Query: 246  GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
            G  H+  +  +G+V+ +G+    K+         +P LI  L      ++ CG  H+  +
Sbjct: 2987 GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAI 3046

Query: 304  TSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHT 360
            TS GELYTWG  E G LG G       P+ V   QG             +V V+CG +  
Sbjct: 3047 TSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQG-----------HRVVQVACGSRDA 3095

Query: 361  AAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
              +    EG + +WG     G F        G+LG G       P  V    +V  +Q+ 
Sbjct: 3096 QTLCLTEEGLVFSWG----DGDF--------GKLGRGGSEGCSVPHQVERLNSVGVMQIE 3143

Query: 418  CGFNHTGAL 426
            CG   + AL
Sbjct: 3144 CGAQFSLAL 3152



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  GRLG G+ E    P +  A E   +  +A G AH L LT +G +Y  G ND+ Q
Sbjct: 748 WGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQ 807

Query: 103 L---GISEN------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           +   G+S +      I  +   LRISG+     Q S  + HSS + V  ++
Sbjct: 808 ICPSGVSRDPIIHSPILTTPPTLRISGMTCGAAQ-SIVWCHSSTLGVASKI 857



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 32/180 (17%)

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSG 306
           S+C  E   +Y F   A +      G+  R  +   +LP +    +V C   +  +LT+G
Sbjct: 485 SSCSPE---MYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTENNIYILTTG 541

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G++++  SN +  +   + + L     VQ               +   C  KH   +S  
Sbjct: 542 GQVFSLHSNSSENIAPKAFEGLEGVHVVQ---------------IAAHCEGKHVMVLSSA 586

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             + W WG             GG+LGHG+ V   HPT++      +   + CG +++ A+
Sbjct: 587 NEV-WSWGAG----------DGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAI 635


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 170/371 (45%), Gaps = 39/371 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDH 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  VV QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHELP---TKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 127 D-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++ L  E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239

Query: 279 RRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P  V  
Sbjct: 240 -YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV-- 296

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + ++I  V+CG +HT A+  S G++  +G G            S GQLG  
Sbjct: 297 ------MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTR 338

Query: 395 NDVDYIHPTIV 405
           +    + P +V
Sbjct: 339 STKSLMLPQVV 349



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+ +LG   L ++ RP++    + + +  ++CG  H+L L+E G V + G ND GQL
Sbjct: 65  GSNDHSQLG-HELPTK-RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQL 122

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   K 
Sbjct: 123 GHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++  G V  WG    G+LG   E+      
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA------ 236

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 237 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  S   L  P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 44/287 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   V   + G  HS  + E G+V  +
Sbjct: 66  SNDHSQLGHELPTK-----------RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             G LG+ S  D+ H   P R+           +   +  ++CG  H+  IS+   + +G
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRL--------TTLLGIPLAAIACGGNHSFLISKSGAV-FG 221

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           W          G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 222 W----------GRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACG 258



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 26/157 (16%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN++  LG      L + 
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLG----HELPTK 79

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             +  P  +  V      ++ +SCG +H+ A+SE G++L+WG             +  GQ
Sbjct: 80  RPLLIPELQDYV------VIQISCGSRHSLALSEWGQVLSWG------------DNDCGQ 121

Query: 391 LGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           LGH  D + +  P +V    +   +Q++CG NH+ AL
Sbjct: 122 LGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVAVHLSCGDEHSAVVTGNNKLY--VFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG ND GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL       +P    +    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTI----GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   E  +L   R      P+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYIFGESENGKLGLPNE--LLSNHR-----IPQLVPEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCV 302
           S  + E+  VY      FG   +  +LF+       P ++  +       + CG  H  +
Sbjct: 255 SVVLTEDA-VYTFGLGQFGQLGLGTLLFE----TSEPKVVENIGNKTISYISCGENHAAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           LT  G +YT+G   +G LG+G
Sbjct: 310 LTDNGLMYTFGDGRHGKLGLG 330



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 158/330 (47%), Gaps = 35/330 (10%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+  I+ENI     P +        V +S G  HS+ +T + +LY++G N+ GQLGLG 
Sbjct: 17  FGKSKIAENI-----PGKFWFKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGS 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K+A  +  PT V+ L     K AA G   ++  T GG V + G    G+LG G       
Sbjct: 72  KSA--VSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTT 129

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F R +   +   IK+L        +AG   SA + E+GR++++GD +  ++      +A 
Sbjct: 130 FHRVSFFTSQHKIKQL--------SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNAC 181

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  ++       + CG YH+  +T+ GELY +G +ENG LG+   + L S  R+     
Sbjct: 182 VPHQVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLP--NELLSNHRIP---- 235

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-D 398
              V +I   ++ V+CG +H+  ++E  + T+G G              GQLG G  + +
Sbjct: 236 -QLVPEIPEKVIQVACGGEHSVVLTEDAVYTFGLG------------QFGQLGLGTLLFE 282

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              P +V    N     +SCG NH   L +
Sbjct: 283 TSEPKVVENIGNKTISYISCGENHAALLTD 312



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 165/356 (46%), Gaps = 50/356 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N  GQLGLG    +     T    +S  FT     KQ + G   S
Sbjct: 99  TLVSTEGGNVYATGGNDEGQLGLGDTEER-----TTFHRVS-FFTSQHKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G      +   L +   +   +     G  V   + G+ H
Sbjct: 153 AALTEDGRLFMWGDNSEGQIG------LPNILNACVPHQVTI-----GKPVSWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +YIFG+    K+ L  E   NH R P L+ ++P    +V CGG H+ VLT 
Sbjct: 202 SAFVTTDGELYIFGESENGKLGLPNELLSNH-RIPQLVPEIPEKVIQVACGGEHSVVLTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI-CTSIVLVSCGWKHTAAIS 364
              +YT+G  + G LG+G++    S  +V        V+ I   +I  +SCG  H A ++
Sbjct: 261 DA-VYTFGLGQFGQLGLGTLLFETSEPKV--------VENIGNKTISYISCGENHAALLT 311

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI-VNFGENVKALQVSCG 419
           +  ++     G HG            LG  N  +   PT+  NF + V  L V+CG
Sbjct: 312 DNGLMYTFGDGRHGKLG---------LGLENFTNQFTPTLCCNFLKFVVKL-VACG 357



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +C  F K  +K +ACGG H +  
Sbjct: 319 FGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVF 364


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 164/393 (41%), Gaps = 42/393 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G   YG L       R  P   S      +  +ACG   T FL ETG V+  G ND GQ
Sbjct: 16  FGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQ 75

Query: 103 LGISENIGYSLEPLRISGLKKEVVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            GI          L  + + +++  I  + G  H +AI+  G LY +G NS GQLG G  
Sbjct: 76  CGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG-- 133

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +   I  PTK++ L+     + A  +  ++ +T  G + ++G    G+LG          
Sbjct: 134 STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDD------- 186

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHA 278
                 + P  +       V   A G  H+     NG V  FG  D       +    HA
Sbjct: 187 --GMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHA 244

Query: 279 RRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             PSL++  P    VV    CG YHT  L   G +Y++G N+ G LG G    L  P  +
Sbjct: 245 -SPSLLAA-PLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLI 302

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 393
           +       V         V+CG  HT  +SE GK+  +G             ++ GQLG 
Sbjct: 303 KALAKTHAVQ--------VTCGCYHTLVLSEDGKVYPFGR------------NNHGQLGL 342

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GN +D   P I+    +   ++V+ GF H+  L
Sbjct: 343 GNLIDCTSPQIIASLRDKFVVKVASGFYHSICL 375



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 36/342 (10%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
           Y+ G N +G+L  ++ +  +L P  IS     +++ ++ G   ++ +   G+++  G N 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTL-PTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 152 NGQLGLGK--KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           +GQ G+G   +   +  +P  V     I   ++A G E   A++  G + ++G    G+L
Sbjct: 73  SGQCGIGSTSRVQSLRLVPALVT--EDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQL 130

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  + I          TP  IK+L    V   A  + H+  +   G +Y FG   + +
Sbjct: 131 GHGSTNPIT---------TPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQ 181

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
           +   +G     P  ++         V CG +HT V  + G +  +G N++G LG G ++D
Sbjct: 182 LGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLD 241

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 386
              SP  +  P     V  +       +CG+ HT A++E           HG+    G +
Sbjct: 242 YHASPSLLAAPLDSLVVPSL-------ACGYYHTIALAE-----------HGSVYSFGRN 283

Query: 387 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             GQLGHG+      PT++       A+QV+CG  HT  L E
Sbjct: 284 DYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSE 325



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 117/266 (43%), Gaps = 13/266 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G    G+LG GS      P        + +  +AC   HT+ +T  G +YA G ND GQ
Sbjct: 122 FGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQ 181

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI + +   + P+ ++    + V+ ++ G HH+     +G +  +GKN +GQLG G   
Sbjct: 182 LGIDDGMDRHV-PVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTL 240

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                       L  +     A G+  ++A+   G V S+G    G+LGHG    +    
Sbjct: 241 DYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHL---- 296

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              SE  P LIK L          G  H+  + E+G+VY FG     ++          P
Sbjct: 297 ---SE--PTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSP 351

Query: 282 SLISKL--PYSEEVVCGGYHTCVLTS 305
            +I+ L   +  +V  G YH+  LT+
Sbjct: 352 QIIASLRDKFVVKVASGFYHSICLTA 377



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 36/291 (12%)

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y +G+NS G+L       + +P P  +     +     A G EQ+  +   G V + G  
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTP--ISFCHNVKILDVACGNEQTAFLFETGDVFTCGYN 71

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
            SG+ G G  S +      +    P L+ E   +    +A G  H   I  +G +Y FG 
Sbjct: 72  DSGQCGIGSTSRV-----QSLRLVPALVTE--DIAHIRSANGCEHLTAISRSGALYTFGF 124

Query: 265 RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  ++     N    P+ I  L   +  EV C  +HT V+T  G LY +G N+ G LGI
Sbjct: 125 NSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGI 184

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA-AISEGKILTWGWGGSHGTFS 381
                 H P  +   F+  PV       + V+CG  HT  +++ G ++ +G         
Sbjct: 185 DDGMDRHVPVPLTY-FNSRPV-------LAVACGQHHTVVSLTNGGVVAFG--------- 227

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV---SCGFNHTGALLEY 429
           ++ H   GQLG G  +DY H +       + +L V   +CG+ HT AL E+
Sbjct: 228 KNDH---GQLGTGYTLDY-HASPSLLAAPLDSLVVPSLACGYYHTIALAEH 274


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 178/380 (46%), Gaps = 45/380 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P + ++ +   ++ ++CG  H   +T+ G V++ G  D G+LG   ++G  L P  I  L
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV-LHPKIIESL 252

Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFT 179
               V  I+ G  H+ A+ + GEL+ WG+ ++       +  +    P K+   L G+  
Sbjct: 253 AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSV 312

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            + A G   +  ++  G++ ++G G  G LGHG  SS+           P+ ++ L+G++
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVA---------RPKEVESLKGLR 363

Query: 240 VKIAAAGFLHSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           VK  A G  H+A I E          +G+++ +GD    K+   +      P+ +  L  
Sbjct: 364 VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 423

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
           S+  +V C    T  LT  G ++T GS E+G LG   +D   S   V+GP     V +I 
Sbjct: 424 SDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD-SSICSVEGPLKTEFVREI- 481

Query: 348 TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
                 S G  H A ++  GK+ TWG G            + GQLG GN VD   PT+V 
Sbjct: 482 ------SSGSSHVAVLTMNGKVFTWGKG------------TEGQLGLGNYVDRSSPTLVE 523

Query: 407 FGENVKALQVSCGFNHTGAL 426
             E+ +   ++CG N T A+
Sbjct: 524 ALEDKQVDSIACGSNFTVAV 543



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D GRLG         P +  +     +KA+A G  HT  L  +G ++  G      
Sbjct: 227 WGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS- 285

Query: 103 LGISENIGYSLE--PLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG+ ++     +  P ++ G  +   VV+++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 286 LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG 345

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
             ++  +  P +VE L G+  K  A G   + A+             GK+ +WG    G+
Sbjct: 346 DTSS--VARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 403

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH  + S L          P  +K L        +     +  +   G V+  G +   
Sbjct: 404 LGHSDKESKL---------VPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 454

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    G+H    S I       K  +  E+  G  H  VLT  G+++TWG    G LG+
Sbjct: 455 QL----GSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGL 510

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G+     SP  V+    +  VD I       +CG   T A+
Sbjct: 511 GNYVDRSSPTLVEA-LEDKQVDSI-------ACGSNFTVAV 543



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 140/346 (40%), Gaps = 53/346 (15%)

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           N F  L +++ I    +   I+ + K  ++ S G H +       ++++WG      L  
Sbjct: 130 NSFQDLTVADTI----KEQGITQMPK--LKPSEGSHVAYGTDSLKDIFVWGDVLGSVLDD 183

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              +   + +P  +     +  +  + G + +  VT  G+V SWG    GRLGH     +
Sbjct: 184 RDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV 243

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           L          P++I+ L    VK  A G  H+  +  +G ++ +G+     +   +   
Sbjct: 244 LH---------PKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGE-GTHSLGVWDDQC 293

Query: 278 ARRPSLISKL--PYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            R      KL  P       ++ CG +HT +++S G+L+T+G    G LG G    +  P
Sbjct: 294 QRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP 353

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-----------GKILTWGWGGSHGTF 380
           + V+              +  V+CG  HTAAI E           GK+ TW         
Sbjct: 354 KEVESLKG--------LRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW--------- 396

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              G +  G+LGH +    + PT V    +    QVSC    T AL
Sbjct: 397 ---GDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVAL 439



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PRL+   + + V+  + G  H+A + + G V+ +G     ++  +       P +I  L 
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA 253

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPV 343
           ++  + +  G  HTC L   GEL+ WG   +  LG+       S   P ++ GP      
Sbjct: 254 FTHVKAIAFGAKHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEG--- 309

Query: 344 DQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                S+V ++CG  HTA IS  G++ T+G     GTF        G LGHG+      P
Sbjct: 310 ----VSVVKMACGQWHTAIISSSGQLFTYG----DGTF--------GVLGHGDTSSVARP 353

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++   V+CG  HT A++E +
Sbjct: 354 KEVESLKGLRVKAVACGPWHTAAIVEIL 381


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1525

 Score =  117 bits (294), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 100/336 (29%), Positives = 158/336 (47%), Gaps = 32/336 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG  DY +LGLG   +R  P         ++ ++A G   +L L   G ++A G N +G
Sbjct: 90  VWGRNDYNQLGLGDDINRLAPEQAPVVS--NIVSVAAGRLFSLALASDGSLWAWGGNYYG 147

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+ +N    L P +  GL  +V  I+ G +H+ A T  GE++  G+N +GQLG     
Sbjct: 148 QLGMGDN-DNRLTPSKTPGLS-DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDH 205

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A     P +V  LS +  K  A G   S+A+   G V +WG   S +LG G        +
Sbjct: 206 ADA---PVQVAGLSNV--KSVAAGEFFSLALKNDGTVWAWGNNESAQLGTG--------I 252

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +  TP  I  L  +     AAG  H+  + E+G V+ +G     ++ F +    + P
Sbjct: 253 AGEAVATPAPIAVLSNITA--IAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAP 310

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +S L     +  G +H+  LTS G L+ WG+N +G LG  +      P +V       
Sbjct: 311 GRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSS----- 365

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                 ++ V  + G +H+ AI ++G +  W WGG+
Sbjct: 366 -----ISNAVSFAGGQRHSLAIAADGSV--WSWGGN 394



 Score =  114 bits (285), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG+G  ++R  P          + A+A G  H L  T++G V+A G ND GQ
Sbjct: 141 WGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHALAATQSGEVWAMGRNDHGQ 198

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + +  ++  P++++GL   V  ++ G   S A+  DG ++ WG N + QLG G  A 
Sbjct: 199 LGFTGD--HADAPVQVAGLSN-VKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGI-AG 254

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +  P  +  LS I     A G   ++A+   G V +WGA GSG+LG G          
Sbjct: 255 EAVATPAPIAVLSNI--TAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFE------- 305

Query: 223 STSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                TP+    +  +  V   A+G+ HS  +  +G ++ +G+    ++     +    P
Sbjct: 306 -----TPKAPGRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLP 360

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           + +S +  +     G  H+  + + G +++WG N  G LG+ S+
Sbjct: 361 AQVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVESL 404



 Score =  114 bits (284), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 39/321 (12%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGYH 133
            +A G  H L L   G V++ G N  GQLG+  +  YS +  P +I+ +   V  I+ G  
Sbjct: 1038 IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN-VAAIACGGS 1096

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            HS A+  DG L+ WG N  GQLGLG   +K  P   KV  +S +     A G   S+A+T
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTP--QKVNAISNV--AAIAAGEYYSLALT 1152

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G V SWG    G+LG G          +    TP+ ++ L  V     AAG  HS  +
Sbjct: 1153 RDGSVWSWGDNSDGQLGLGD---------NEDRNTPQKVEVLSNVAA--IAAGEDHSLAL 1201

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
              +G V+ +G  +  ++   + +    P  ++ +   + +  G  H+  ++  G  + WG
Sbjct: 1202 TRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFAISEEGLAWAWG 1261

Query: 314  SNENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
             N +G LGIG+   L   ++P++V          ++ +++V +S G  H+ A++E   L 
Sbjct: 1262 YNYDGQLGIGTSGSLANENTPQKV----------KVISNVVGLSGGNYHSLALTEDGAL- 1310

Query: 371  WGWGGSHGTFSEDGH--SSGG 389
            W WG      ++DG   S+GG
Sbjct: 1311 WAWGD-----NDDGQIGSTGG 1326



 Score =  110 bits (275), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 24/252 (9%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           ++ A+ACGG+H+L L   G  ++ G N +GQLG+ +N+  +  P +++ L   VV ++ G
Sbjct: 598 NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKT-TPRKVNALSN-VVAMAAG 655

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+T+DG L+ WG N+ GQLGLG    +    P KV  +S +     A G+  S+A
Sbjct: 656 DRHSLALTLDGSLWSWGDNTYGQLGLGDNDHR--NTPRKVNAISNVVA--IAAGYRHSLA 711

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G V SWG    G+LG G          +    TP+ +  +  +K    A G  +S 
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGD---------NDDRNTPQPVTTISNIKA--IAVGNNYSI 760

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHA-----RRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            I E G V+ +G     ++    G H        P  +  +     +  G  H+  LT  
Sbjct: 761 AISEEGLVWAWGYNCSGQLGI--GTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTED 818

Query: 307 GELYTWGSNENG 318
           G L+ WG+NE G
Sbjct: 819 GALWAWGNNEAG 830



 Score =  110 bits (274), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGY 132
           ++A GG H L L   G V++ G N  GQLG+     YS E  P +I+ +   V  I+ G 
Sbjct: 548 SIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN-VAAIACGG 606

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            HS A+  DG  + WG N  GQLGLG   +K    P KV  LS +    A  G   S+A+
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKT--TPRKVNALSNVVAMAA--GDRHSLAL 662

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G + SWG    G+LG G          +    TPR +  +  V V I AAG+ HS  
Sbjct: 663 TLDGSLWSWGDNTYGQLGLGD---------NDHRNTPRKVNAISNV-VAI-AAGYRHSLA 711

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G V+ +G+    ++   + +    P  ++ +   + +  G  ++  ++  G ++ W
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAW 771

Query: 313 GSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
           G N +G LGIG+   L   ++P++V           + +++V +S G  H+ A++E   L
Sbjct: 772 GYNCSGQLGIGTHGSLADENTPQKV----------IVISNVVGLSAGSSHSIALTEDGAL 821

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
            W W          G++  GQ+     ++YI
Sbjct: 822 -WAW----------GNNEAGQIAAEEAIEYI 841



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 36/355 (10%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHH 134
            +A GG  +L L   G +++ G N  GQLG+      ++  P ++  L     +I+ G +H
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP-AAKIAAGDNH 1044

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            + A+  DG ++ WG NS+GQLGLG          P K+  +S +     A G   S+AV 
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV--AAIACGGSHSLAVA 1102

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G + SWG    G+LG G          + S+ TP+ +  +  V     AAG  +S  +
Sbjct: 1103 RDGSLWSWGYNYYGQLGLGD---------NYSKTTPQKVNAISNVAA--IAAGEYYSLAL 1151

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
              +G V+ +GD +  ++   +      P  +  L     +  G  H+  LT  G +++WG
Sbjct: 1152 TRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWG 1211

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
             N  G LG+   D  ++P+         PV  I ++I  ++ G  H+ AISE + L W W
Sbjct: 1212 RNSRGQLGLDDNDDRNTPQ---------PVTTI-SNIKAIAAGNSHSFAISE-EGLAWAW 1260

Query: 374  GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G ++    + G  + G L + N      P  V    NV  L  S G  H+ AL E
Sbjct: 1261 GYNYD--GQLGIGTSGSLANENT-----PQKVKVISNVVGL--SGGNYHSLALTE 1306



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 84/296 (28%), Positives = 134/296 (45%), Gaps = 30/296 (10%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L L   G V+  G ND+ QLG+ ++I   L P + + +   +V ++ G   S A+  D
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDIN-RLAPEQ-APVVSNIVSVAAGRLFSLALASD 135

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G L+ WG N  GQLG+G    ++   P+K   LS +     A G   ++A T  G+V  W
Sbjct: 136 GSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDV--AAIAGGDYHALAATQSGEV--W 189

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
                GR  HGQ    LGF   T ++    ++      VK  AAG   S  +  +G V+ 
Sbjct: 190 AM---GRNDHGQ----LGF---TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWA 239

Query: 262 FGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           +G+    ++     G     P+ I+ L     +  G  H   L   G ++ WG+N +G L
Sbjct: 240 WGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQL 299

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
           G G  +   +P RV               +  ++ GW H+ A++   +L W WG +
Sbjct: 300 GFGDFETPKAPGRVSS----------LADVTAIASGWFHSLALTSDGVL-WAWGNN 344



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 103/359 (28%), Positives = 158/359 (44%), Gaps = 44/359 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYH 133
           +A GG  +L L   G V++ G N  GQLG+   EN      P  +  L      I+ G  
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDV-FTPTNVDALPL-AASIAAGGG 554

Query: 134 HSSAITVDGELYMWGKNS-NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           H+ A+  DG ++ WG+NS                 P K+  +S +     A G   S+A+
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNV--AAIACGGSHSLAL 612

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G   SWG    G+LG G          + S+ TPR +  L  V     AAG  HS  
Sbjct: 613 ARDGSFWSWGYNYYGQLGLGD---------NVSKTTPRKVNALSNVVA--MAAGDRHSLA 661

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G ++ +GD    ++   + +H   P  ++ +     +  G  H+  LT  G +++W
Sbjct: 662 LTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSW 721

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G+N  G LG+G  D  ++P+         PV  I ++I  ++ G  ++ AISE + L W 
Sbjct: 722 GNNTRGQLGLGDNDDRNTPQ---------PVTTI-SNIKAIAVGNNYSIAISE-EGLVWA 770

Query: 373 WGGSHGTFSEDGHSSGGQLG---HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           W          G++  GQLG   HG+  D   P  V    NV  L  S G +H+ AL E
Sbjct: 771 W----------GYNCSGQLGIGTHGSLADENTPQKVIVISNVVGL--SAGSSHSIALTE 817



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 96/350 (27%), Positives = 157/350 (44%), Gaps = 48/350 (13%)

Query: 83  TLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           T+FL   G  +A      G+ D  Q G  +N  +  EP   +G       +++   HS A
Sbjct: 25  TIFLIAPGAAFAADSDGDGVED-AQDGCPDNF-FKSEP-GFTGCGNAEPMVASRLDHSLA 81

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +  DG +++WG+N   QLGLG    ++   P +   +S I +  A   F  S+A+   G 
Sbjct: 82  LKGDGTVWVWGRNDYNQLGLGDDINRL--APEQAPVVSNIVSVAAGRLF--SLALASDGS 137

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           + +WG    G+LG G   +     R T   TP L        V   A G  H+    ++G
Sbjct: 138 LWAWGGNYYGQLGMGDNDN-----RLTPSKTPGL------SDVAAIAGGDYHALAATQSG 186

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            V+  G     ++ F  G+HA  P  ++ L   + V  G + +  L + G ++ WG+NE+
Sbjct: 187 EVWAMGRNDHGQLGFT-GDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNES 245

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGS 376
             LG G      + E V  P   +P+  + ++I  ++ G +H  A++E G +  WG  GS
Sbjct: 246 AQLGTGI-----AGEAVATP---API-AVLSNITAIAAGRRHAMALAEDGSVWAWGANGS 296

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                       GQLG G+      P  V+   +V A  ++ G+ H+ AL
Sbjct: 297 ------------GQLGFGDFETPKAPGRVSSLADVTA--IASGWFHSLAL 332


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 187/422 (44%), Gaps = 59/422 (13%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           +++ L+      WG+G+ G+LG+G  E +  P    A   +++ A+  G  ++L + + G
Sbjct: 1   MATPLRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDG 60

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGK 149
            ++  G N  G LG          P  +  L   ++VQ + G  H  A+   G  Y WG 
Sbjct: 61  RLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGG 120

Query: 150 NSNGQLGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           N  GQ G        G +A  + IPIP +  C   +  +Q A G   SV +T  G V +W
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTW 178

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G           +    G ++  S  TP  ++ LE  KV++ A G  H+  + E+  ++ 
Sbjct: 179 G-----------QPWPPGDIKQIS--TPVRVQGLE--KVRVIAVGAFHNLALTEDVILWA 223

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +G+    ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G 
Sbjct: 224 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGR 283

Query: 320 LGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           LG G     H  P +V+    E         IV VSCG  H+ A++ +G++ ++G  G H
Sbjct: 284 LGFGDDKSSHMVPLKVELLAGE--------DIVQVSCGGTHSVALARDGRMFSYG-RGDH 334

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPT--IVNFGE-------NVKALQVSCGFNHTGALLE 428
                      G+LG+G  V   HP    +N            +A  V+CG  HT A+ E
Sbjct: 335 -----------GRLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIAE 383

Query: 429 YV 430
           + 
Sbjct: 384 WT 385


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 24/302 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG   ++  P         +++ ++       HTL +T  G V++ G  D+
Sbjct: 426 GKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDY 485

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G+LG   N      P  I G  L K VV +S GY HS+A+T DGELY WG+   G+LG  
Sbjct: 486 GKLGHG-NSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHS 544

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSI 217
              ++   +PT V+ +SG+   Q A G   ++AV   G+++ S+G G +G+LGHG  + +
Sbjct: 545 DSHSRN--VPTLVKDISGV--GQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRV 600

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L G  ++   AG   S  +   G+V+ +G  +       E   
Sbjct: 601 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 650

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERV 334
           + RP LI +L  ++  ++ CG  H   L+   E++ WG+N  G  G G     +  P++V
Sbjct: 651 SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKV 710

Query: 335 QG 336
            G
Sbjct: 711 IG 712



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 178/396 (44%), Gaps = 51/396 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+    +L  G+LE   +P +   F    +  +  G   T  ++  G V A G   +G
Sbjct: 374 VWGSNSSHQLAEGTLEKILQPKLAQGFSDAQM--IEAGQYCTFSVSADGAVKACGKGSYG 431

Query: 102 QLGISENIGYS------LEPLRISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQ 154
           +LG+ ++   S      LEP R   ++K  V  S G   H+ A+T +GE++ WG    G+
Sbjct: 432 RLGLGDSNNQSMPKKLVLEPPRT--MRK--VSSSKGSDGHTLAVTAEGEVFSWGDGDYGK 487

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G  A +  P   +   L  +    +A G+  S AVT  G++ +WG G  GRLGH   
Sbjct: 488 LGHGNSATQKYPKIIQGPLLGKVVVCVSA-GYRHSAAVTNDGELYTWGEGDFGRLGHSD- 545

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
                   S S   P L+K++ GV     A G  H+  + ++GR V+ FG     K+   
Sbjct: 546 --------SHSRNVPTLVKDISGVGQ--VACGSSHTIAVAQDGRIVWSFGGGDNGKLGHG 595

Query: 274 EGNHARRPSLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           + N   RP +I  L  +    VC G  + + LTS G+++ WG     CLG GS +     
Sbjct: 596 DTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC--GSCLGCGSSETTSLR 653

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
            R+    S        T I+ +SCG  H  A+S E ++  W            G+++ GQ
Sbjct: 654 PRLIEELS-------ITKIIDISCGDSHCLALSHENEVFAW------------GNNAMGQ 694

Query: 391 LGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G+       P  V   E V   Q++ G +H+ A
Sbjct: 695 CGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLA 730



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 41/239 (17%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +  + P + SA + + +  L        H+L LTETG V++ G  D+
Sbjct: 3915 GEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDY 3974

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I GL+ +EVVQ++ G+ HS+ +T DG+L+ +G   +G+LG   
Sbjct: 3975 GKLGHG-NSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRS 4033

Query: 160  KAAKVIP---------------------------IPTKVECLSGIFTKQAALGFEQSVAV 192
             + K+IP                            P  +  L G+F +  A+G E  +A+
Sbjct: 4034 TSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILAL 4093

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +  G V +WG     +LG G  + +           P L+  L+G  ++  +AG  HS+
Sbjct: 4094 SNTGDVYAWGCNCEAQLGLGHSNPV---------KEPILVTTLQGKNIRQISAGRCHSS 4143



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 52/300 (17%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWGNG +G+L      S   P +  +  +   + + CG   T  +   G V A G   +G
Sbjct: 3864 LWGNGRHGQLADAG-TSASVPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGSYG 3920

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGY---HHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   N      P  IS L+  VV Q+ T Y    HS A+T  GE++ WG    G+LG 
Sbjct: 3921 RLG-QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGH 3979

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +    P ++E L G    Q A GF+ S  VT  GK+ ++G+G SGRLG       
Sbjct: 3980 GNSERQR--RPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQ------ 4031

Query: 218  LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV---DKMLFQ 273
                RSTS +  P  +  L+G                      +  G R +   D ML  
Sbjct: 4032 ----RSTSNKMIPERVTALDG----------------------HHIGQRLIGLPDAML-- 4063

Query: 274  EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              NH  RP +I  L   + E++  G  H   L++ G++Y WG N    LG+G  + +  P
Sbjct: 4064 -KNH-NRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEP 4121



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 155/346 (44%), Gaps = 42/346 (12%)

Query: 88  ETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           +T  VY  G N   QL  G  E I   L+P    G   +   I  G + + +++ DG + 
Sbjct: 368 DTVMVYVWGSNSSHQLAEGTLEKI---LQPKLAQGFS-DAQMIEAGQYCTFSVSADGAVK 423

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAG 204
             GK S G+LGLG    + +P    +E    +    ++ G +  ++AVT  G+V SWG G
Sbjct: 424 ACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDG 483

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             G+LGHG          S ++  P++I+  L G  V   +AG+ HSA +  +G +Y +G
Sbjct: 484 DYGKLGHGN---------SATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWG 534

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL-YTWGSNENGCLGI 322
           +    ++   + +    P+L+  +    +V CG  HT  +   G + +++G  +NG LG 
Sbjct: 535 EGDFGRLGHSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGH 594

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT--AAISEGKILTWGWGGSHGTF 380
           G  + ++ P+ ++          +   I+   C    +  A  S G++  WG G   G  
Sbjct: 595 GDTNRVYRPKVIEA---------LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCG 645

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           S +  S             + P ++      K + +SCG +H  AL
Sbjct: 646 SSETTS-------------LRPRLIEELSITKIIDISCGDSHCLAL 678



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 92/198 (46%), Gaps = 21/198 (10%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            E+Y+WG   +GQL     +A V   PT    LS   T+Q   G   +  V   G VL+ G
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASV---PTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVG 3915

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRV 259
             G  GRLG G    +         YTP +I  L+G  V      +    HS  + E G V
Sbjct: 3916 EGSYGRLGQGNSDDL---------YTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEV 3966

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+        RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+GS +
Sbjct: 3967 FSWGDGDYGKLGHGNSERQRRPKQIEGL-QGEEVVQLACGFKHSAVVTADGKLFTFGSGD 4025

Query: 317  NGCLGIGSIDVLHSPERV 334
            +G LG  S      PERV
Sbjct: 4026 SGRLGQRSTSNKMIPERV 4043



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 11/185 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V  A     ++ +  G   +L LT  G V+A G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 643

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G SE    SL P  I  L   +++ IS G  H  A++ + E++ WG N+ GQ G G  +
Sbjct: 644 CGSSETT--SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTS 701

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             V   P KV  L G+  +Q   G   S+   AV    ++++W       L    E S  
Sbjct: 702 TPVTK-PKKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDL----EESTF 756

Query: 219 GFLRS 223
            +LRS
Sbjct: 757 TYLRS 761



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 47/258 (18%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSA 251
            G  +V  WG G  G+L              TS   P L   L   +  +      FL   
Sbjct: 3858 GKSEVYLWGNGRHGQLADA----------GTSASVPTLAPSLSQTQQVVCGQNCTFL--- 3904

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGY----HTCVLTSG 306
             +  NG V   G+ +  ++     +    P++IS L  Y    +   Y    H+  LT  
Sbjct: 3905 -VQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-E 365
            GE+++WG  + G LG G+ +    P++++G   E         +V ++CG+KH+A ++ +
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGE--------EVVQLACGFKHSAVVTAD 4015

Query: 366  GKILTWGWGGS--------------HGTFSEDGHSSGGQLGHGNDV---DYIHPTIVNFG 408
            GK+ T+G G S                  + DGH  G +L    D    ++  P I+   
Sbjct: 4016 GKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPAL 4075

Query: 409  ENVKALQVSCGFNHTGAL 426
            E V    ++ G  H  AL
Sbjct: 4076 EGVFIEDIAVGCEHILAL 4093


>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
 gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
           Y-400-fl]
          Length = 790

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 176/391 (45%), Gaps = 47/391 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV  +  E   + A+A G  HT  LT +G V   G N  GQ
Sbjct: 193 WGDNSSGQLGDGTTNDRNTPVDVAGLES-GVAAIAAGEGHTCALTTSGGVKCWGDNLEGQ 251

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   + P+ ++GL+ +V  I+ G+ H+ A+T  G +  WG NS+GQLG G    
Sbjct: 252 LG-GGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTMTE 310

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+   +   SG+    A  G   + A+T GG V  WG    G+LG+           
Sbjct: 311 RNVPVGV-IGLESGVTAITAGGG--HTCALTTGGGVKCWGNNFYGQLGN----------- 356

Query: 223 STSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             + + P +  ++ G+ + +   AAG  H+  +  +G V  +G      +   +G    R
Sbjct: 357 -VTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGGVKCWGYNY--DVQLGDGTTTAR 413

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +       +VV    GG HTC LT+ G +  WG N N  LG G++   ++P  V G 
Sbjct: 414 STPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMIDRNTPVDVIGL 473

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
            S          +  ++ G  HT A++    +  W            G +  GQLGHG  
Sbjct: 474 GSR---------VTAITAGGNHTCALTTSDGVKCW------------GSNLYGQLGHGTM 512

Query: 397 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
             Y  P  V  G N     ++ G+ HT AL+
Sbjct: 513 NFYGTPVDV-IGLNGDVTAIAAGWWHTCALM 542



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 177/435 (40%), Gaps = 86/435 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G++  R  PV     E   + A+A GG+HT  LT  G V   G N  GQ
Sbjct: 91  WGDNSSGQLGDGTMNDRNTPVDVVGLES-GVAAIAAGGSHTCALTTNGGVKCWGANVSGQ 149

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I YS  P+ +  L + V  I+ G+ H+ A+T  G +  WG NS+GQLG G    
Sbjct: 150 LGNETQIPYS-APVDVVELGRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTND 208

Query: 163 KVIPIPTK------------------------VEC----------------------LSG 176
           +  P+                           V+C                      ++G
Sbjct: 209 RNTPVDVAGLESGVAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAG 268

Query: 177 IFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           + +  AA+  G+E + A+T  G V  WG   SG+LG G           T    P  +  
Sbjct: 269 LESDVAAIAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTM---------TERNVPVGVIG 319

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEV 293
           LE     I A G  H+  +   G V  +G+    ++     +    P  ++ L      +
Sbjct: 320 LESGVTAITAGGG-HTCALTTGGGVKCWGNNFYGQLGNVTAHQPGIPVDVAGLGIGVVAI 378

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
             GG HTC LT+ G +  WG N +  LG G+     +P  V G  S+         +V +
Sbjct: 379 AAGGAHTCALTTSGGVKCWGYNYDVQLGDGTTTARSTPVDVSGLESD---------VVTI 429

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENV 411
           + G  HT A+ + G +  W            G +   QLG G  +D   P  ++  G  V
Sbjct: 430 TAGGAHTCALTTSGGVKCW------------GRNFNFQLGDGTMIDRNTPVDVIGLGSRV 477

Query: 412 KALQVSCGFNHTGAL 426
            A  ++ G NHT AL
Sbjct: 478 TA--ITAGGNHTCAL 490



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 172/389 (44%), Gaps = 44/389 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG  +      PV  +      + A+A GGAHT  LT +G V   G N   Q
Sbjct: 346 WGNNFYGQLGNVTAHQPGIPVDVAGLGI-GVVAIAAGGAHTCALTTSGGVKCWGYNYDVQ 404

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL+ +VV I+ G  H+ A+T  G +  WG+N N QLG G    
Sbjct: 405 LGDGTTTARS-TPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMID 463

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P+      + G+ ++  A+  G   + A+T    V  WG+   G+LGHG     + F
Sbjct: 464 RNTPVD-----VIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGHGT----MNF 514

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                  TP  +  L G  V   AAG+ H+  +  +G V  +G  A D     +G  + R
Sbjct: 515 YG-----TPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWG--ANDSGQLGDGTRSDR 566

Query: 281 --PSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             P  +S L      +  G +HTC LT+ G +  WGSN +  LG  ++   + P  V G 
Sbjct: 567 SIPVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQPYIPVDVFGL 626

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
           +S          +  ++ G  HT A++ G      WGG++           GQLG G   
Sbjct: 627 WS---------GVTAITAGLHHTCALTTGSAQVQCWGGNY----------DGQLGDGTTN 667

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               P  V  G       ++ G  HT AL
Sbjct: 668 LRRFPQTV-IGLEGSETAIAAGGAHTCAL 695



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 150/336 (44%), Gaps = 33/336 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG     +LG G++  R  PV         + A+  GG HT  LT +  V   G N +GQ
Sbjct: 448 WGRNFNFQLGDGTMIDRNTPVDVIGLGSR-VTAITAGGNHTCALTTSDGVKCWGSNLYGQ 506

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + +   P+ + GL  +V  I+ G+ H+ A+  DG +  WG N +GQLG G ++ 
Sbjct: 507 LG-HGTMNFYGTPVDVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSD 565

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + IP+      +SG+ +  AA+  G   + A+T  G V  WG+  S +LG+         
Sbjct: 566 RSIPVD-----VSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGN--------- 611

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNHA 278
           +     Y P  +  L      I A   LH  C    G  +V  +G     ++     N  
Sbjct: 612 ITVGQPYIPVDVFGLWSGVTAITAG--LHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLR 669

Query: 279 RRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           R P  +  L  SE  +  GG HTC LT  G +  WG N  G LG GS+    +P  V   
Sbjct: 670 RFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDVI-- 727

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTWG 372
             ES VD I       + G+ HT A++  K +  WG
Sbjct: 728 RLESNVDAI-------AAGFFHTCALTTDKGVKCWG 756



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 25/304 (8%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST 130
            ++ A+A G  HT  LT  G V   G N  GQLG    +     P+ + GL+  V  I+ 
Sbjct: 67  RNITAIATGRYHTCALTTGGGVKCWGDNSSGQLG-DGTMNDRNTPVDVVGLESGVAAIAA 125

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  H+ A+T +G +  WG N +GQLG   +     P+   VE   G+F   A  G+E + 
Sbjct: 126 GGSHTCALTTNGGVKCWGANVSGQLGNETQIPYSAPVDV-VELGRGVFDITA--GWEHTC 182

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T GG V  WG   SG+LG G          +    TP  +  LE   V   AAG  H+
Sbjct: 183 ALTTGGGVKCWGDNSSGQLGDGT---------TNDRNTPVDVAGLES-GVAAIAAGEGHT 232

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGEL 309
             +  +G V  +GD    ++          P  ++ L      +  G+ HTC LT+ G +
Sbjct: 233 CALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGV 292

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
             WG+N +G LG G++   + P  V G  S          +  ++ G  HT A++  G +
Sbjct: 293 RCWGNNSSGQLGDGTMTERNVPVGVIGLES---------GVTAITAGGGHTCALTTGGGV 343

Query: 369 LTWG 372
             WG
Sbjct: 344 KCWG 347



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 21/285 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G++     PV         + A+A G  HT  L   G V   G ND GQ
Sbjct: 499 WGSNLYGQLGHGTMNFYGTPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWGANDSGQ 557

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P+ +SGL   V  I+ G  H+ A+T  G +  WG NS+ QLG      
Sbjct: 558 LGDGTRSDRSI-PVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQ 616

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILG 219
             IP+      + G+++   A+  G   + A+T G  +V  WG    G+LG G  +    
Sbjct: 617 PYIPVD-----VFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN---- 667

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            LR      P+ +  LEG +  IAA G  H+  +  +G +  +GD    ++     +   
Sbjct: 668 -LRRF----PQTVIGLEGSETAIAAGG-AHTCALTVSGGMKCWGDNFYGQLGDGSMHDRS 721

Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
            P  + +L  + + +  G+ HTC LT+   +  WG N    LG G
Sbjct: 722 TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDG 766



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 135/306 (44%), Gaps = 37/306 (12%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           + +  I+TG +H+ A+T  G +  WG NS+GQLG G    +  P+   V   SG+     
Sbjct: 67  RNITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDV-VGLESGV--AAI 123

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G   + A+T  G V  WGA  SG+LG+  E+ I           P  + EL G  V  
Sbjct: 124 AAGGSHTCALTTNGGVKCWGANVSGQLGN--ETQI-------PYSAPVDVVEL-GRGVFD 173

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTC 301
             AG+ H+  +   G V  +GD +  ++     N    P  ++ L      +  G  HTC
Sbjct: 174 ITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESGVAAIAAGEGHTC 233

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            LT+ G +  WG N  G LG G+I    +P  V G  S+         +  ++ GW+HT 
Sbjct: 234 ALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESD---------VAAIAVGWEHTC 284

Query: 362 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++  G +  W            G++S GQLG G   +   P  V  G       ++ G 
Sbjct: 285 ALTTVGGVRCW------------GNNSSGQLGDGTMTERNVPVGV-IGLESGVTAITAGG 331

Query: 421 NHTGAL 426
            HT AL
Sbjct: 332 GHTCAL 337



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P      E  S  A+A GGAHT  LT +G +   G N +GQ
Sbjct: 653 WGGNYDGQLGDGTTNLRRFPQTVIGLEG-SETAIAAGGAHTCALTVSGGMKCWGDNFYGQ 711

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +  L+  V  I+ G+ H+ A+T D  +  WG N   QLG G+   
Sbjct: 712 LGDGSMHDRS-TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGRPLW 770

Query: 163 KVIPI 167
           + +P+
Sbjct: 771 RSVPV 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 81/220 (36%), Gaps = 51/220 (23%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+   R  PV  S      + A+  G  HT  LT +G V   G N   Q
Sbjct: 550 WGANDSGQLGDGTRSDRSIPVDVSGLGS-GVAAITAGLFHTCALTTSGGVKCWGSNSSWQ 608

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKKA 161
           LG +  +G    P+ + GL   V  I+ G HH+ A+T    ++  WG N +GQLG G   
Sbjct: 609 LG-NITVGQPYIPVDVFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN 667

Query: 162 AKVIP------------------------IPTKVECLSGIFTKQ---------------- 181
            +  P                        +   ++C    F  Q                
Sbjct: 668 LRRFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDVI 727

Query: 182 --------AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
                    A GF  + A+T    V  WG     +LG G+
Sbjct: 728 RLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGR 767


>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 1001

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 166/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 7   LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ S
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPS 226

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 227 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 269

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 270 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 28  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 86  PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPSE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 148/313 (47%), Gaps = 37/313 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 99  TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPSELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 313

Query: 366 GKILTWGWGGSHG 378
           G + T+G  G HG
Sbjct: 314 GLLYTFG-DGRHG 325



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 42/254 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 43  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 94  CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 151

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYH 201

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQV 416
           +A ++ +G++ T+G                G+LG  +++   H  P  V  G   + +QV
Sbjct: 202 SAFVTMDGELYTFG------------EPENGKLGLPSELLMNHRSPQRV-LGIPERVIQV 248

Query: 417 SCGFNHTGALLEYV 430
           +CG  HT  L E V
Sbjct: 249 ACGGGHTVVLTEKV 262



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 150/328 (45%), Gaps = 29/328 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +  +P   +    + +K +A   GG H L LT  G V++ G  + G
Sbjct: 2710 GEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDG 2769

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    I Y   P  +  LK K +  ++ G  HS+A+T  GELY WG    G+LG G  
Sbjct: 2770 KLGHGNKISYD-RPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDN 2828

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++   P +V  LS     Q A G    Q++A+T    V SWG G  G+LG G      
Sbjct: 2829 VPQL--KPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG----- 2881

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P+ ++ L   +V     G   S  + +NG+V+ +G     ++     +H 
Sbjct: 2882 ----SDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV 2937

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R P ++ +L      +V  G  H   +T  GE+Y WG N++G  G G+  V   P  V+G
Sbjct: 2938 RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRG 2997

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAAIS 364
                        +I  V+CG  H+ A S
Sbjct: 2998 ----------LEAITNVACGSSHSVAWS 3015



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 176/391 (45%), Gaps = 43/391 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG           +C A    +L+ +   GG  TLF LT  G VYATG    
Sbjct: 3624 WGHNHRGQLGGVEGAKVKTATICDALT--ALRPVQIVGGEQTLFALTSDGKVYATGYGAG 3681

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI      S  P  I  L+  +V    +++G  H  A+T  G+++ WG+  +G+LG 
Sbjct: 3682 GRLGIGGTESVS-TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH 3740

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G KA  +   P  +E L        A G   S  +T  G++ +WG G  GRLGHG     
Sbjct: 3741 GSKA--LCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGD---- 3794

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+ ++EL G  V   A  +G   + C+  +G V+ +GD    K+     
Sbjct: 3795 -----SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGS 3849

Query: 276  NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L  +   +V CG   +  LT+ G +YTWG  +   LG GS D +  P+ 
Sbjct: 3850 DGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQA 3909

Query: 334  VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
            VQG      V Q       V+ G  H  A ++ G++ TW            G +  GQLG
Sbjct: 3910 VQGALQGKRVIQ-------VAVGSLHCVACTDSGEVFTW------------GDNDEGQLG 3950

Query: 393  HGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
             G+      P +V   +  K  +V+CG  HT
Sbjct: 3951 DGSTNAIQRPKLVASLKGKKMNRVACGSAHT 3981



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 23/272 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +  + +   ++ +ACG +H+  +T +G +Y  G  ++G+
Sbjct: 2763 WGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGR 2822

Query: 103  LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N+   L+P ++  L  E VVQ++ G   +   A+T    +Y WG    G+LG G 
Sbjct: 2823 LGHGDNVP-QLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG 2881

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   +P  VE L+     Q   G + S+A++  GKV +WG G   RLGHG +S +  
Sbjct: 2882 SDGS--SLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV-- 2937

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--- 276
                     P++++EL    V   + G LH   + + G VY +GD        Q+GN   
Sbjct: 2938 -------RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHG----QQGNGNT 2986

Query: 277  -HARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
               R+P+++  L     V CG  H+   +S G
Sbjct: 2987 TVNRKPAIVRGLEAITNVACGSSHSVAWSSTG 3018



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 60/355 (16%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V+  GLND  QLG            SE I  +L+P+ I+G  K +  +S           
Sbjct: 2654 VFVWGLNDKDQLGGLKGSKIKEPKFSEVIS-NLKPMNIAGGSKSLFIVSH---------- 2702

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            DG+++  G+ +NG+LGLG       P P  +  LS  F K+ A+  G   ++A+T  G+V
Sbjct: 2703 DGKVFACGEGTNGRLGLGHSHNVAQPKP--LTDLSPYFIKKVAVHSGGRHALALTIDGRV 2760

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG +          S   P+L++ L+  +++  A G  HSA +  +G 
Sbjct: 2761 FSWGEGEDGKLGHGNK---------ISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGE 2811

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   +     +P  +  L +    +V CG     T  LT    +Y+WG 
Sbjct: 2812 LYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGD 2871

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGW 373
             + G LG G  D    P+ V+   S+         ++ V CG + + A+S+ GK+ TWG 
Sbjct: 2872 GDFGKLGKGGSDGSSLPQNVETLNSQ--------QVIQVECGAQFSLALSKNGKVWTWGK 2923

Query: 374  GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G               +LGHG+D     P +V    +   +QVS G  H  A+ +
Sbjct: 2924 GDYF------------RLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTD 2966



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 32/292 (10%)

Query: 139  TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
             ++ ++++WG N   QLG G K +K I  P   E +S +     A G +    V+  GKV
Sbjct: 2649 NIECKVFVWGLNDKDQLG-GLKGSK-IKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKV 2706

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             + G G +GRLG G   ++    +  ++ +P  IK     KV + + G  H+  +  +GR
Sbjct: 2707 FACGEGTNGRLGLGHSHNV-AQPKPLTDLSPYFIK-----KVAVHSGG-RHALALTIDGR 2759

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
            V+ +G+    K+         RP L+  L      +V CG  H+  +TS GELYTWGS E
Sbjct: 2760 VFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGE 2819

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK--HTAAISEGKILTWGWG 374
             G LG G       P++V+    E         +V V+CG +   T A++E +   + WG
Sbjct: 2820 YGRLGHGDNVPQLKPKQVRALSHE--------RVVQVACGSRDAQTLALTE-RHWVYSWG 2870

Query: 375  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               G F        G+LG G       P  V    + + +QV CG   + AL
Sbjct: 2871 D--GDF--------GKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL 2912



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 127/289 (43%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G ++ WG N  GQLG G + AKV    T  + L+ +   Q   G +   A+T  GKV + 
Sbjct: 3619 GVIHGWGHNHRGQLG-GVEGAKV-KTATICDALTALRPVQIVGGEQTLFALTSDGKVYAT 3676

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+          TP LI+ L+ V V   A  +G  H   +  +G V
Sbjct: 3677 GYGAGGRLGIGGTESV---------STPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDV 3727

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +G+    K+         RP LI  L   +   V CGG H+  +T+ GELYTWG    
Sbjct: 3728 FSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRY 3787

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P++V+     + +D  C S      G   T  +S    L W WG   
Sbjct: 3788 GRLGHGDSEDQLKPKKVEELAGHNVLDVACGS------GDAQTLCVSRDG-LVWSWG--- 3837

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  ++  +N   ++V CG   + AL
Sbjct: 3838 -----DGDY--GKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVAL 3879



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 38/265 (14%)

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +AA    +  + EC  GI  +  +    +++      KV  WG     +LG  + S I  
Sbjct: 2620 EAANYRFLAQETECKLGIVNQMGSPSMRENIEC----KVFVWGLNDKDQLGGLKGSKI-- 2673

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+  + +  +K    A G      +  +G+V+  G+    ++     ++  
Sbjct: 2674 -------KEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVA 2726

Query: 280  RPSLISKL-PYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            +P  ++ L PY  + V    GG H   LT  G +++WG  E+G LG G+      P+ V+
Sbjct: 2727 QPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVE 2786

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                       C  I  V+CG  H+AA+ S G++ TWG G              G+LGHG
Sbjct: 2787 S--------LKCKRIRDVACGSSHSAAVTSSGELYTWGSG------------EYGRLGHG 2826

Query: 395  NDVDYIHPTIVNFGENVKALQVSCG 419
            ++V  + P  V    + + +QV+CG
Sbjct: 2827 DNVPQLKPKQVRALSHERVVQVACG 2851



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
            WG+ D G+LG GS  +  RP + ++ +   +  +ACG AHT+
Sbjct: 3941 WGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 134/273 (49%), Gaps = 21/273 (7%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P ++S     K+V++++ G +HS  +T DGE+Y WG N++GQ+G G  A + I
Sbjct: 111 TTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAI 170

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P      CL        A G   SVAV   G+V  WG  G+G+LG G          S +
Sbjct: 171 PRRV-TGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS---------SGN 220

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
           + TP  +  L+G++V+  A GF H+  + + G+VY +G  +  ++    GN + +    P
Sbjct: 221 QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPTP 278

Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            ++ K    E   C   HT    T GG +Y WG
Sbjct: 279 VVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  +LE
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGD-VQSTLE 64

Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N   QLG G     ++P      
Sbjct: 65  PRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGS---------TANQAIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 175 TGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 235 VQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDR 285

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 286 I---IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       LG ++ST E  PR +  L   K+   + G   H  
Sbjct: 38  TINDEIFVLGTNCSGCLG-------LGDVQSTLE--PRRLDSLSDKKIACLSYGSGPHII 88

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
                G V+ +G     ++     NH   P  +S    ++   EV CG YH+ VLTS GE
Sbjct: 89  LATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           +Y WG N +G +G GS      P RV G      V       V ++CG   + A+ + G+
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVV-------VNIACGQMCSVAVVDTGE 201

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CGF HT  L 
Sbjct: 202 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLT 249

Query: 428 E 428
           +
Sbjct: 250 D 250



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           T++ E+++ G N +G LGLG   + + P   +++ LS    K A L +      +  T  
Sbjct: 38  TINDEIFVLGTNCSGCLGLGDVQSTLEP--RRLDSLSD--KKIACLSYGSGPHIILATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG  G  +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 146 DGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVW 205

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGFAHTLVLTDEGQV 254

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 255 YAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 299



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 149/326 (45%), Gaps = 27/326 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       +  +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2647 GEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2706

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    I    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 2707 KLGHGNCISLD-KPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 2765

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +  P    V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 2766 ITQTRP--KLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 2818

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP  +  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 2819 ----SDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 2874

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 2875 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHD 2934

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAA 362
               ++ V++       VSCG  H+ A
Sbjct: 2935 -LEDARVNR-------VSCGSSHSIA 2952



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 23/266 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  +P +    +   ++ +ACG  H+  +   G +Y  GL ++G+
Sbjct: 2700 WGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 2759

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  + I  +   L  + + + VVQ++ G     + A+T DG +Y WG    G+LG G  
Sbjct: 2760 LGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 2819

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 P+   V+ L+G+   Q   G + S+A+T  G+V +WG G   RLGHG +  +   
Sbjct: 2820 DGCYTPL--AVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 2874

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P L++ L G K+   A G LH   + + G+VY +GD        Q+GN A  
Sbjct: 2875 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGATS 2924

Query: 279  --RRPSLISKLPYSE--EVVCGGYHT 300
              R+PSL+  L  +    V CG  H+
Sbjct: 2925 VNRKPSLVHDLEDARVNRVSCGSSHS 2950



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 164/361 (45%), Gaps = 64/361 (17%)

Query: 88   ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            +   VY  GLND  QLG          I   +   L+P+ I+G  K +  +S        
Sbjct: 2587 QQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQ------- 2639

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
               +G+LY  G+ +NG+LGLG      +  P  +  LS    K+ A+  G + ++A+T  
Sbjct: 2640 ---EGKLYACGEGTNGRLGLGDD--NNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQD 2694

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV SWG G  G+LGHG   S+           P+LI+ L+  +++  A G  HSA I  
Sbjct: 2695 GKVFSWGEGEDGKLGHGNCISL---------DKPKLIEILKSKRIRDIACGSGHSAAIAS 2745

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYT 311
            NG +Y +G     ++   +     RP L+  L      +V CG     T  LT+ G +Y+
Sbjct: 2746 NGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYS 2805

Query: 312  WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
            WG  + G LG G  D  ++P   +R+ G             ++ V CG + + A+++ G+
Sbjct: 2806 WGDGDFGKLGRGGSDGCYTPLAVDRLNG-----------LGVIQVECGAQFSLALTKYGE 2854

Query: 368  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            + TWG G               +LGHGND     PT+V      K + V+ G  H  A+ 
Sbjct: 2855 VWTWGKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVT 2902

Query: 428  E 428
            +
Sbjct: 2903 D 2903



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 199/424 (46%), Gaps = 46/424 (10%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
            +L  D ++  +    +R   +  Q+    +WG  D  +LG G   S+ + P+      K 
Sbjct: 2564 FLASDWEVLQEQVAIQRSTDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPIYSEVLSK- 2621

Query: 72   SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
             LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++     EP  I  L + V++  
Sbjct: 2622 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKAIPFLSQFVIKKV 2679

Query: 128  -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
             + +G  H+ A+T DG+++ WG+  +G+LG G   +  +  P  +E L     +  A G 
Sbjct: 2680 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEILKSKRIRDIACGS 2737

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A G
Sbjct: 2738 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALVGQRVVQVACG 2788

Query: 247  F--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCV 302
                 +  +  +G VY +GD    K+     +    P  + +L      +V CG   +  
Sbjct: 2789 SRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLA 2848

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
            LT  GE++TWG  +   LG G+   +  P  V+G   +         I+ V+ G  H  A
Sbjct: 2849 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK--------IIHVAVGALHCLA 2900

Query: 363  ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
            +++ G++  WG         ++ H   GQ G+G       P++V+  E+ +  +VSCG +
Sbjct: 2901 VTDTGQVYAWG---------DNDH---GQQGNGATSVNRKPSLVHDLEDARVNRVSCGSS 2948

Query: 422  HTGA 425
            H+ A
Sbjct: 2949 HSIA 2952



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 140/315 (44%), Gaps = 26/315 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           T +Y      LG K   C        +R    L  NG+   +  GS E+++ P+    F 
Sbjct: 93  TPFYCDPIAGLGIKQLCCT-------ERSLMILSLNGNAYNMYHGS-ETQY-PLRVHGFS 143

Query: 70  KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
              +  +A    G H L LT+ GCVY+ G  D G+LG  + + Y    L  S L K +V 
Sbjct: 144 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVF 203

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
           I+ G  +S+A++  GELY WG+ + G+LG G      +  PT V  L G      A G  
Sbjct: 204 IACGSTYSAALSASGELYTWGRGNYGRLGHGN--FDDVLTPTLVTTLKGHTVVHVACGSG 261

Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
             Q++ VT  G V SWG G  G+LG G          +    TP+++ +L  + V     
Sbjct: 262 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 312

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G   SA +  +G VY +G     ++      H R P +I  L     +++  G  H   L
Sbjct: 313 GGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL 372

Query: 304 TSGGELYTWGSNENG 318
           T    +Y WG N+ G
Sbjct: 373 TEDQFVYGWGRNDYG 387



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 141/323 (43%), Gaps = 44/323 (13%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C       +K L C     + L+  G  Y              N+ +  E   PLR+
Sbjct: 94  PFYCDPIAGLGIKQLCCTERSLMILSLNGNAY--------------NMYHGSETQYPLRV 139

Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
            G   + + +   +    H  A+T DG +Y WG    G+LG G   +     P  +E L 
Sbjct: 140 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIESLL 197

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                  A G   S A++  G++ +WG G  GRLGHG    +L         TP L+  L
Sbjct: 198 DKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVL---------TPTLVTTL 248

Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
           +G  V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      
Sbjct: 249 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 308

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V CGG  +  LT+ GE+YTWG  +   LG GS + +  P+ +     ES  D+    I 
Sbjct: 309 KVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVI-----ESLRDK---KIK 360

Query: 352 LVSCGWKHTAAISEGKILTWGWG 374
            +S G  H  A++E + + +GWG
Sbjct: 361 DLSVGTTHILALTEDQFV-YGWG 382



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 136/314 (43%), Gaps = 39/314 (12%)

Query: 124  EVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            EV+Q       S+        +Y+WG N   QLG G K +K I +P   E LS +     
Sbjct: 2570 EVLQEQVAIQRSTDTPPQQSAVYVWGLNDKDQLG-GLKGSK-IKLPIYSEVLSKLKPIHI 2627

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G ++++           P+ I  L    +K 
Sbjct: 2628 AGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC---------EPKAIPFLSQFVIKK 2678

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY 298
             A  +G  H+  + ++G+V+ +G+    K+         +P LI  L      ++ CG  
Sbjct: 2679 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSG 2738

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            H+  + S GELYTWG  E G LG G       P+ VQ    +         +V V+CG +
Sbjct: 2739 HSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQ--------RVVQVACGSR 2790

Query: 359  HT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
                 A  ++G + +WG     G F        G+LG G       P  V+    +  +Q
Sbjct: 2791 DAQTMALTTDGCVYSWG----DGDF--------GKLGRGGSDGCYTPLAVDRLNGLGVIQ 2838

Query: 416  VSCGFNHTGALLEY 429
            V CG   + AL +Y
Sbjct: 2839 VECGAQFSLALTKY 2852



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G+ +    P + +  + H++  +ACG   + TL +T +G V++ G  D+
Sbjct: 223 WGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 282

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG     G     +    L   VV++  G   S+A+T  GE+Y WGK    +LG G +
Sbjct: 283 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSE 342

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +  P  +E L     K  ++G    +A+T    V  W     GR  +GQ    LG 
Sbjct: 343 --EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 395

Query: 221 LRSTSEYTPRL 231
           + S     P L
Sbjct: 396 VVSEPTLCPTL 406



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 34/244 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 160 LALTQDGCVYSWGNGDGGRLGHGD---------TVSYDEPKLIESLLDKNIVFIACGSTY 210

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  +G +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 211 SAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 270

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G +++WG  + G LG G  D   +P+ V              ++V V CG + +AA++ 
Sbjct: 271 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLD--------INVVKVFCGGQFSAALTA 322

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ TWG G ++            +LGHG++    +P ++    + K   +S G  H  
Sbjct: 323 HGEVYTWGKGDAY------------RLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHIL 370

Query: 425 ALLE 428
           AL E
Sbjct: 371 ALTE 374


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 179/379 (47%), Gaps = 60/379 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQIST 130
           + ++ACGG H + +T+ G V++ G     +LG    +  S   L   + G+  E+V  + 
Sbjct: 294 VHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELV--AC 351

Query: 131 GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFE 187
           G +HS A+T+ G+LY WG   +++G LG G +A+    IP KV   + G+     A G  
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHW--IPKKVSGPMEGMHVSYVACGPW 409

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  VT  G++ ++G G  G LGHG  SS+           PR ++ L G +    A G 
Sbjct: 410 HTAVVTSAGQLFTFGDGTFGALGHGDHSSM---------SIPREVEALRGQRTMRVACGV 460

Query: 248 LHSACIDE---------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS 290
            H+A + E               +G+++ +GD   DK     G+   R  P  ++ L   
Sbjct: 461 WHTAAVVELMIASSSFESSGSSSSGKLFTWGDG--DKGRLGHGDKEPRLVPQSVTALINE 518

Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
              +V CG   +  LT+ G +YT GS   G LG    D    P  V+G  + S V++   
Sbjct: 519 SFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADG-KIPTLVEGKIANSFVEE--- 574

Query: 349 SIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
               V+CG  H A + S+ ++ TWG G            + GQLGHG++     PT+V+F
Sbjct: 575 ----VACGSYHVAVLTSKTEVYTWGKG------------TNGQLGHGDNDHRNTPTLVDF 618

Query: 408 GENVKALQVSCGFNHTGAL 426
            ++ +   V CG N T A+
Sbjct: 619 LKDKQVKNVVCGLNFTAAI 637



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 156/344 (45%), Gaps = 43/344 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG     RLG G       P +  A    +++ +ACG  H+  +T +G +Y    G ++ 
Sbjct: 316 WGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNS 375

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG      + + P ++SG  +   V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 376 GLLGHGSEASHWI-PKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHG 434

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
             ++  + IP +VE L G  T + A G   + AV                  GK+ +WG 
Sbjct: 435 DHSS--MSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGD 492

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG +   L          P+ +  L        A G   S  +  +GRVY  G
Sbjct: 493 GDKGRLGHGDKEPRL---------VPQSVTALINESFCQVACGHNLSVALTTSGRVYTMG 543

Query: 264 DRAVDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             AV   L       + P+L+  K+  S  EEV CG YH  VLTS  E+YTWG   NG L
Sbjct: 544 S-AVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQL 602

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           G G  D  ++P  V   F +   D+   ++V   CG   TAAIS
Sbjct: 603 GHGDNDHRNTPTLVD--FLK---DKQVKNVV---CGLNFTAAIS 638



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 137/314 (43%), Gaps = 58/314 (18%)

Query: 142 GELYMWGKN-SNGQLGLG------KKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+   +G +G G        + K+  + P  +E    +     A G + +V VT
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVT 308

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG     RLGHG E  +           P+LI  L G+ +++ A G  HS  +
Sbjct: 309 KKGEVFSWGEECGSRLGHGVEVDV---------SHPKLIDALCGMNIELVACGEYHSCAV 359

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +GD   +  L   G+ A    P  +S   +  +   V CG +HT V+TS G+
Sbjct: 360 TLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQ 419

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--- 365
           L+T+G    G LG G    +  P  V+    +          + V+CG  HTAA+ E   
Sbjct: 420 LFTFGDGTFGALGHGDHSSMSIPREVEALRGQ--------RTMRVACGVWHTAAVVELMI 471

Query: 366 -------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
                        GK+ TWG G              G+LGHG+    + P  V    N  
Sbjct: 472 ASSSFESSGSSSSGKLFTWGDGDK------------GRLGHGDKEPRLVPQSVTALINES 519

Query: 413 ALQVSCGFNHTGAL 426
             QV+CG N + AL
Sbjct: 520 FCQVACGHNLSVAL 533



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 108/248 (43%), Gaps = 39/248 (15%)

Query: 196 GKVLSWGAG--------GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           G V  WG G        G  R+G    + I   L       P+ ++    + V   A G 
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALL-------PKALESTVVLDVHSIACGG 301

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
            H+  + + G V+ +G+    ++          P LI  L     E V CG YH+C +T 
Sbjct: 302 KHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTL 361

Query: 306 GGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            G+LYTWG  ++ +G LG GS      P++V GP            +  V+CG  HTA +
Sbjct: 362 SGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPME-------GMHVSYVACGPWHTAVV 414

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
            S G++ T+G     GTF        G LGHG+      P  V      + ++V+CG  H
Sbjct: 415 TSAGQLFTFG----DGTF--------GALGHGDHSSMSIPREVEALRGQRTMRVACGVWH 462

Query: 423 TGALLEYV 430
           T A++E +
Sbjct: 463 TAAVVELM 470


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   ++ +SCG +H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNL--GVIYISCGDEH 247

Query: 360 TAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA  I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 33/311 (10%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
            G  + +G  +  ++     N    + +P  I  L      Y   + CG  HT VL   G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SE 365
           +++T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + 
Sbjct: 256 KVFTFGDNSSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTT 306

Query: 366 GKILTWGWGGS 376
           G+++++G G S
Sbjct: 307 GQVISFGHGPS 317



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ + +     P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  +  L  +     + G E +  +   GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  + S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL I  LK   V+ IS G  H++ +  DG+++ +G NS+GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 39/257 (15%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ Q       V+
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQ-------VA 187

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENV 411
            G  H+ A+S     ++GWG           +S GQL   G    V    P  +   +N+
Sbjct: 188 AGGAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 412 KALQVSCGFNHTGALLE 428
             + +SCG  HT  L++
Sbjct: 237 GVIYISCGDEHTAVLIQ 253



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++     
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI----- 122

Query: 340 ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 397
            + ++ I   I+ VSCG  H+ A+S + ++ +W            G +S GQLG G +V 
Sbjct: 123 -TTLNGI--KIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVP 167

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               P  V   E +   QV+ G  H+ AL
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFAL 196


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG + 
Sbjct: 92  GCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 150

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P ++S   + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 208

Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 209 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 259

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
           ++ TP  I  L+G++V+  A G  H+  + + G++Y +G  +  ++     ++   P+ +
Sbjct: 260 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 319

Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           +  K    E   C   HT    T  G++Y WG
Sbjct: 320 TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L++TE   V+  G+N  G LG  + I  ++E
Sbjct: 46  KWPIFSLCSQEELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD-IQSTIE 104

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G     ++P      
Sbjct: 105 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN 164

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L      + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 165 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 214

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 215 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 274

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V        VD+    
Sbjct: 275 VQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVT-------VDKD-RV 326

Query: 350 IVLVSCGWKHTAA--ISEGKILTWG 372
           + + +C   HT+A     G++  WG
Sbjct: 327 VEIAACHSAHTSAAKTQSGQVYMWG 351



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 108/242 (44%), Gaps = 33/242 (13%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
           VT   +V   G   SG LG G        ++ST E  P+ +  L G K+   + G   H 
Sbjct: 77  VTENDEVFVLGMNCSGCLGTGD-------IQSTIE--PKRLDSLCGKKIACLSYGSGPHV 127

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
               E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS G
Sbjct: 128 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 187

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-G 366
           E+YTWG N +G +G GS      P RV        V       V ++CG   + A+ E G
Sbjct: 188 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV-------VNIACGQMCSMAVVENG 240

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           ++  WG+ G+            GQLG G+  +   P  +   + ++  +V+CG  HT  L
Sbjct: 241 EVYVWGYNGN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVL 288

Query: 427 LE 428
            +
Sbjct: 289 TD 290



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 244 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 303

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  VV+I+  +  H S+A T  G++YMWG+   GQ     
Sbjct: 304 QLGTGNKSNQSY-PTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 356

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 357 --SVVLPHLTHFACTDDVF 373



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 45/298 (15%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
           +T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T 
Sbjct: 77  VTENDEVFVLGMNCSGCLGTGDIQSTIEP--KRLDSLCG--KKIACLSYGSGPHVVLATE 132

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG     +LG+G  +  L   + ++    + + E+        A G  HS  + 
Sbjct: 133 EGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEV--------ACGSHHSMVLT 184

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
            +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y 
Sbjct: 185 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 244

Query: 312 WGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           WG N NG LG+GS     +P R+   QG             +  V+CG  HT  ++ EG+
Sbjct: 245 WGYNGNGQLGLGSSGNQPTPCRIAALQG-----------IRVQRVACGCAHTLVLTDEGQ 293

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           I  WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 294 IYAWG------------ANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSA 339


>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
 gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
          Length = 233

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 15/237 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 36/256 (14%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   A G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIGSIDVLH--SPERVQG----PFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGW 373
           G+G ID     SP+ ++     PF +            V+ G  H+  ++  G I  WG 
Sbjct: 170 GLG-IDCQKQTSPQLIKSLLGIPFMQ------------VAAGGAHSFVLTLSGAIFGWGR 216

Query: 374 G--GSHGTFSEDGHSS 387
              G  G   E+G  +
Sbjct: 217 NKFGQLGLNDENGRCA 232



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G ++  G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 102 QLGISENIG 110
           QLG+++  G
Sbjct: 221 QLGLNDENG 229


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 35/345 (10%)

Query: 89  TGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           +G +Y+ G N +G+LG  ++I  + L  + + G   ++ Q+++G    + +T DG +   
Sbjct: 320 SGELYSCGQNSYGELGTGDDIERHQLTSISLCGWD-DIRQVASGNETLAVLTNDGVVLTC 378

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
           G N +GQ G G    +V+ +   V+ L     K   A+ G E  +A+T  G   SWG   
Sbjct: 379 GLNKSGQCGQGHFDERVMML-RPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYND 437

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH           +T  + P+LI+ L+  K++ A+  + HSA I ++G +Y FG  
Sbjct: 438 RGQLGHEN--------LTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMN 489

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++      H   P L+     +E   V CG YHT + T+ G L+  G N+ G LG+G
Sbjct: 490 DCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLG 549

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
                H+ +         P + +      V+ G+ H+  ++           S  TFS  
Sbjct: 550 -----HNRQIKVASLVSLPNEMVS----YVASGYYHSVVVT----------NSGRTFSF- 589

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G +  GQLG GN V    P +V    N + ++ +CG  HT  L E
Sbjct: 590 GRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSE 634



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 169/397 (42%), Gaps = 46/397 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G    R +    S      ++ +A G      LT  G V   GLN  GQ 
Sbjct: 327 GQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQC 386

Query: 104 G---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G     E +   L P++ +   + + +  S G  H  A+T  G  Y WG N  GQLG   
Sbjct: 387 GQGHFDERV-MMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHEN 445

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
              KV  +P  +E L     + A++ +  S  +T  G++ ++G    G+LG  H Q  S 
Sbjct: 446 LTTKV-HVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQS- 503

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                     TP+L+K  EG ++ + A G  H+      G ++  G     ++       
Sbjct: 504 ----------TPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQ 553

Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            +  SL+S LP      V  G YH+ V+T+ G  +++G N+ G LGIG+    + P  V 
Sbjct: 554 IKVASLVS-LPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVA 612

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
              +        T +V  +CG  HT  +SE G++  +            G ++ GQLG+ 
Sbjct: 613 LSAN--------TRMVRATCGCYHTVLLSEQGQVFVF------------GRNNKGQLGNR 652

Query: 395 NDVDYIHPTIVNF---GENVKALQVSCGFNHTGALLE 428
              D + P  +       + + + V+ GF  T  ++E
Sbjct: 653 GSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVE 689



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 146/327 (44%), Gaps = 27/327 (8%)

Query: 49  GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G+ G G  + R    RPV     ++    A + G  H + LT++G  Y+ G ND GQLG 
Sbjct: 384 GQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLG- 442

Query: 106 SENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
            EN+   +  P  I  LK K++   S  YHHS+ IT  GELY +G N  GQLGL     +
Sbjct: 443 HENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQ 502

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P  V+   G      A G   ++  T  G + + G    G+LG G    I    + 
Sbjct: 503 --STPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQI----KV 556

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
            S      +  L    V   A+G+ HS  +  +GR + FG     ++      H   P++
Sbjct: 557 AS------LVSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNV 610

Query: 284 ISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE 340
           ++    +  V   CG YHT +L+  G+++ +G N  G LG  GS D L     +  P   
Sbjct: 611 VALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADAL-----LPVPLKV 665

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGK 367
            P ++     V V+ G+  T+ I E K
Sbjct: 666 RP-EKNSRRCVDVAAGFYTTSLIVERK 691



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 13/218 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D G+LGL   + +  P +   FE   +  +ACG  HT+  T TG ++A G ND+GQ
Sbjct: 486 FGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQ 545

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+  N    +  L +S   + V  +++GY+HS  +T  G  + +G+N  GQLG+G K  
Sbjct: 546 LGLGHNRQIKVASL-VSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVH 604

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGF- 220
           +   +P  V   +     +A  G   +V ++  G+V  +G    G+LG+ G   ++L   
Sbjct: 605 Q--NVPNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVP 662

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
           L+   E   R   ++        AAGF  ++ I E  R
Sbjct: 663 LKVRPEKNSRRCVDV--------AAGFYTTSLIVERKR 692


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGG---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-- 282
           ++ TP  +  L+G++V+ AA G+ H+  + + G+VY++G  +  ++    GN + +P   
Sbjct: 244 NQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQPYPT 301

Query: 283 --LISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
             ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 140/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K+V  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            +   CG  HT VLT  G++Y WG+N  G LG G+        +   P+    + +    
Sbjct: 259 VQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGN--------KSNQPYPTPIIVEKDRI 310

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 311 IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G KV   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG   + A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VNIACGQMCSMAVVDTGEVYVWGYSGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G   +   P  V   + ++  + +CG+ HT  L +
Sbjct: 239 LGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTD 274



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG   ++  P   +A +   ++  ACG AHTL LT+ G VY  G N +G
Sbjct: 228 VWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG   N      P  I   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTG-NKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 168/373 (45%), Gaps = 55/373 (14%)

Query: 42  LWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +WG+ D G+LGLG    E ++ PV    F    ++ +ACG  H L + + G V+A G ND
Sbjct: 524 VWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 582

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG----------------E 143
            GQLG+   +  S EP  ++ L+ + + +  G  +S+ IT +G                +
Sbjct: 583 DGQLGLGV-LRPSFEPAAVTALR-QAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGD 640

Query: 144 LYMWGKNSNGQLGLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           L+ WG   +G+LGLG+  A   I  P KV     +     +LG   ++A+T  G+  +WG
Sbjct: 641 LWTWGAAESGKLGLGEDVASGSILTPQKVPF--SVPVCACSLGTSHALAITARGECYAWG 698

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG  GRLG G          + + Y P      +GV+++  AAG  HS  +  +G ++I+
Sbjct: 699 AGYYGRLGIGT---------TANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIW 749

Query: 263 GDRAVDKMLFQEGNHAR---RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN---E 316
           G +  D       N  R   +    S +P  + +    +H+  +T  GE++ WG N   +
Sbjct: 750 GKKE-DTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQ 808

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQIC--------TSIVLVSCGWKHTAAISEGKI 368
            GC G    + L  PE + G      +  +C         S  ++  G  + A +  G  
Sbjct: 809 TGC-GKRQAERLDRPEMIAG------LPNVCQWVATGPQASFFVLCSGEVYAAGVINGGR 861

Query: 369 LTWGWGGSHGTFS 381
           L  GW      F+
Sbjct: 862 LGTGWSKRKYQFA 874



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 182/447 (40%), Gaps = 95/447 (21%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHS------------------LKALACGGAHT 83
           WG G YG LG G     + PV V    EK S                  +   A G  H+
Sbjct: 205 WGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHS 264

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
           +  T  G ++  G    G+LG+  N G SL P  +   L ++VV +S G  HS+ I   G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDVVFVSAGDSHSACIDRQG 323

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            LY WG    G+LG G +    IP+P KVE   G+   Q A G   ++A+T  G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG +  LG G++              P+ + ++E V V   AAG  HSA +   G + ++
Sbjct: 382 AGLALGLGEGEDGG------GGMVTVPKHLSDIE-VAVLNVAAGPYHSAAVTVGGDLLVW 434

Query: 263 G-------------DRAVDKMLFQEGNHARRPSLISKL-------PYSEEVV-------- 294
           G             ++   K +    N      L S L        YS+  V        
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGA 494

Query: 295 -------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV-QGPFSE 340
                        CG  HT  LT  G ++ WGSN+ G LG+G        E+V +  +  
Sbjct: 495 GANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLG--------EQVEEDQYEP 546

Query: 341 SPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             +D   T I  ++CG KH  A+++ G +  W            G +  GQLG G     
Sbjct: 547 VKLDCFSTPIRRIACGSKHCLAVAQYGDVFAW------------GANDDGQLGLGVLRPS 594

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             P  V      +A+ V CG +++  +
Sbjct: 595 FEPAAVTALR--QAIDVFCGDDYSACI 619



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 184/446 (41%), Gaps = 95/446 (21%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG+G +GRLG G       P     F    +  +ACG  HTL LT  G V+A   GL   
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
              G     G    P  +S ++  V+ ++ G +HS+A+TV G+L +WG   + +LG G +
Sbjct: 388 LGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447

Query: 161 AAKVIPIPTKVECLSG---IFTKQAALGFEQ----------------------------- 188
             +  P P  V  L     +   Q+ LG  +                             
Sbjct: 448 QNQ--PFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQS 505

Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
                  +VA+TG G V  WG+   G+LG G++           +Y P  + +     ++
Sbjct: 506 LGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQV-------EEDQYEPVKL-DCFSTPIR 557

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
             A G  H   + + G V+ +G     ++       +  P+ ++ L  + +V CG  Y  
Sbjct: 558 RIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSA 617

Query: 301 CVLTSG---------------GELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSES 341
           C+ ++G               G+L+TWG+ E+G LG+G  DV    + +P++V  PFS  
Sbjct: 618 CITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGE-DVASGSILTPQKV--PFS-- 672

Query: 342 PVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                   +   S G  H  AI+  G+   WG G              G+LG G   +  
Sbjct: 673 ------VPVCACSLGTSHALAITARGECYAWGAG------------YYGRLGIGTTANAY 714

Query: 401 HPTIVNFGENVKALQVSCGFNHTGAL 426
            PT  +F + V+   V+ G +H+ AL
Sbjct: 715 APTKCDFPKGVRIRSVAAGASHSLAL 740



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 170/427 (39%), Gaps = 83/427 (19%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
           +P      +K  +  ++CG  HTL L++ G +YA G+  +G LG  +    +  P+R+  
Sbjct: 171 KPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDT-SDAYSPVRVLL 229

Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
                SG KKE + I             + G  HS A T DG L+ WG   NG+LGLG  
Sbjct: 230 GSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +   P  V+ +        + G   S  +   G + +WG+GG GRLGHG +  I   
Sbjct: 290 RGSL--SPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEI--- 344

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   PR ++   GV V   A G  H+  +   G V+ +G      +   E      
Sbjct: 345 ------PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGM 398

Query: 281 PSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---- 332
            ++   L   E     V  G YH+  +T GG+L  WG   +  LG G       P+    
Sbjct: 399 VTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVAD 458

Query: 333 -----------------RVQGPFSESPV----------DQICTSIVLVSCGWKHTAAISE 365
                            R++  +S+  V          +    ++  + CG  HT A++ 
Sbjct: 459 LRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALT- 517

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVN-FGENVKALQVSCGFNH 422
           G    W WG           +  GQLG G  V  D   P  ++ F   ++  +++CG  H
Sbjct: 518 GTGAVWVWGS----------NDEGQLGLGEQVEEDQYEPVKLDCFSTPIR--RIACGSKH 565

Query: 423 TGALLEY 429
             A+ +Y
Sbjct: 566 CLAVAQY 572



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 145/317 (45%), Gaps = 32/317 (10%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
           +L++L CG  HT+ LT TG V+  G ND GQLG+ E +     EP+++      + +I+ 
Sbjct: 502 TLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIAC 561

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
           G  H  A+   G+++ WG N +GQLGLG      + A V  +   ++   G        +
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITS 621

Query: 184 LGFEQSVAV-----TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            G  Q+V++     T  G + +WGA  SG+LG G++ +      S S  TP+ +     V
Sbjct: 622 NGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVA------SGSILTPQKVP--FSV 673

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCG 296
            V   + G  H+  I   G  Y +G     ++      +A  P+     K      V  G
Sbjct: 674 PVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAG 733

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             H+  L+  G+L+ WG  E+ C    S    +SP       S S V ++ +    ++  
Sbjct: 734 ASHSLALSMDGDLWIWGKKEDTC----STTNYNSPRIFMQLESPSGVPKVKS----IAAA 785

Query: 357 WKHTAAISE-GKILTWG 372
             H+ A++E G++  WG
Sbjct: 786 EHHSLAVTETGEVFAWG 802



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 42/277 (15%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G +H+ A+T  G +++WG N  GQLGLG++  +    P K++C S    ++ A G +  +
Sbjct: 509 GENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPI-RRIACGSKHCL 567

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLH 249
           AV   G V +WGA   G+LG       LG LR + E  P  +  L + + V     G  +
Sbjct: 568 AVAQYGDVFAWGANDDGQLG-------LGVLRPSFE--PAAVTALRQAIDV---FCGDDY 615

Query: 250 SACIDENGRVYI----------FGDR----AVDKMLFQEGNHARRPSLIS--KLPYSEEV 293
           SACI  NG              FGD     A +      G      S+++  K+P+S  V
Sbjct: 616 SACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPV 675

Query: 294 VC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
                G  H   +T+ GE Y WG+   G LGIG+    ++P +   P            I
Sbjct: 676 CACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKG--------VRI 727

Query: 351 VLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
             V+ G  H+ A+S    L W WG    T S   ++S
Sbjct: 728 RSVAAGASHSLALSMDGDL-WIWGKKEDTCSTTNYNS 763



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 152/389 (39%), Gaps = 98/389 (25%)

Query: 72  SLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQ 127
           S+K +A G  HTL +   G    + A G N    LG+       + P  +    +  V +
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFE 106

Query: 128 ISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAK------------------- 163
           +S G ++S+ +        G++Y +G  + G+LG  K  A+                   
Sbjct: 107 VSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166

Query: 164 -VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P P +V         + + G + ++A++ GG + +WG G  G LG G  S       
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTS------- 219

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y+P          V++       S    EN  +   G R  D ++           
Sbjct: 220 --DAYSP----------VRVLLGSEKGSGKKKENLGI---GRRGTDPVV----------- 253

Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
                     V C   G  H+   TS G L+TWG   NG LG+G     H+    +G  S
Sbjct: 254 ----------VTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLG-----HN----RGSLS 294

Query: 340 ESPVDQICT-SIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            + VD I    +V VS G  H+A I  +G + TWG GG             G+LGHG+  
Sbjct: 295 PAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGF------------GRLGHGDQG 342

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +   P  V     V  LQV+CG  HT AL
Sbjct: 343 EIPVPRKVEGFGGVPVLQVACGTFHTLAL 371



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 67/182 (36%), Gaps = 53/182 (29%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC-----------SAFEKHSL------------------ 73
           WG G YGRLG+G+  + + P  C           +A   HSL                  
Sbjct: 697 WGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTC 756

Query: 74  -----------------------KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG 110
                                  K++A    H+L +TETG V+A G N   Q G  +   
Sbjct: 757 STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQA 816

Query: 111 YSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
             L+ P  I+GL      ++TG   S  +   GE+Y  G  + G+LG G    K    P 
Sbjct: 817 ERLDRPEMIAGLPNVCQWVATGPQASFFVLCSGEVYAAGVINGGRLGTGWSKRKYQFAPA 876

Query: 170 KV 171
            V
Sbjct: 877 AV 878


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 175/391 (44%), Gaps = 44/391 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 25  WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 82

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 83  GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 195

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 196 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 249

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 309

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           +VQG   +  +     S+  V C         +G++ TW            G +  GQLG
Sbjct: 310 QVQGLQGKKVIAIATGSLHCVCC-------TEDGEVYTW------------GDNDEGQLG 350

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
            G       P +V   +  K  +V+CG  HT
Sbjct: 351 DGTTNAIQRPRLVAALQGKKVNRVACGSAHT 381



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 131/343 (38%), Gaps = 96/343 (27%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA--LGFEQS---------- 189
           G +Y WG N  GQLG G + AKV  +PT  E L+   T +    +G EQ+          
Sbjct: 20  GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALA---TLRPVQLIGGEQTLFAVTADGKL 74

Query: 190 -----------------------------------VAVTGGGK----------VLSWGAG 204
                                              VAV  GGK          V SWG  
Sbjct: 75  YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 134

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G 
Sbjct: 135 EDGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 185

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
               ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G L
Sbjct: 186 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 245

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
           G G  D    P ++               +V V CG + + A+++ G + TWG G  H  
Sbjct: 246 GRGGSDGCKVPMKIDSLTG--------LGVVKVECGSQFSVALTKSGAVYTWGKGDYH-- 295

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                     +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 296 ----------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 328



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 2   LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
           LGR  +   K  +K D   G  LG+    C    S  L +  A   WG GDY RLG GS 
Sbjct: 245 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 302

Query: 57  ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
           +   RP      +   + A+A G  H +  TE G VY  G ND GQLG          P 
Sbjct: 303 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 361

Query: 117 RISGLK-KEVVQISTGYHHSSA 137
            ++ L+ K+V +++ G  H+ A
Sbjct: 362 LVAALQGKKVNRVACGSAHTLA 383


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 158/339 (46%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  ++  +P +  A    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 366 WGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 425

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RI+G  +  +V  ++ G  H++ IT  G+L+ +G  + G LG G
Sbjct: 426 GLLGHGTDVSHWI-PKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 484

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            +  + I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 485 DR--ENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKN 542

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  I  L        A G   +  +  +GRV+  G   V
Sbjct: 543 RLGHGDKDARL---------EPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGS-TV 592

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  + P L+  KL     EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 593 YGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGD 652

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           ++   +P  V     E+  D+    +  ++CG  ++AAI
Sbjct: 653 VEDRKTPTLV-----EALKDR---HVKYIACGSNYSAAI 683



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 168/372 (45%), Gaps = 56/372 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G ++  G    G+LG  + +N+   ++P  +  L    V  ++ G 
Sbjct: 347 IACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNV---VQPCLVEALASSTVDFVACGE 403

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQ 188
            H+ A+T+ GE+Y WG  ++  G LG G   +  IP  I   +E L   F      G   
Sbjct: 404 FHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFV---TCGPWH 460

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  +T  G++ ++G G  G LGHG   +I           PR ++ L G++    A G  
Sbjct: 461 TALITSTGQLFTFGDGTFGVLGHGDRENI---------SYPREVESLSGLRTVSVACGVW 511

Query: 249 HSACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
           H+A I E           +G+++ +GD   +++   + +    P+ IS L  Y+   + C
Sbjct: 512 HTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIAC 571

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           G   T  LT+ G ++T GS   G LG    D    P  V+   +   V++I       +C
Sbjct: 572 GHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDG-KLPCLVEDKLAGECVEEI-------AC 623

Query: 356 GWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H T   S  ++ TWG G +            G+LGHG+  D   PT+V   ++    
Sbjct: 624 GAYHVTVLTSRNEVYTWGKGAN------------GRLGHGDVEDRKTPTLVEALKDRHVK 671

Query: 415 QVSCGFNHTGAL 426
            ++CG N++ A+
Sbjct: 672 YIACGSNYSAAI 683



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 113/226 (50%), Gaps = 33/226 (14%)

Query: 218 LGFLRSTSEYTPR----LIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G  ++ S  +PR    L K LE    + V   A G  H+A +   G ++ +G+ +  ++
Sbjct: 315 VGADKNVSYCSPRTDILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRL 374

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G +  +P L+  L  S  + V CG +HTC +T  GE+YTWG  ++  G LG G+ D
Sbjct: 375 GHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGT-D 433

Query: 327 VLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 384
           V H  P+R+ GP            +  V+CG  HTA I S G++ T+G     GTF    
Sbjct: 434 VSHWIPKRIAGPLE-------GLQVAFVTCGPWHTALITSTGQLFTFG----DGTF---- 478

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
               G LGHG+  +  +P  V     ++ + V+CG  HT A++E +
Sbjct: 479 ----GVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVEVI 520



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 60/313 (19%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+    +  ++G  K  +   P     +P  +E    +   Q A G + +  VT
Sbjct: 299 GDVYIWGEVISENVVKVGADKNVSYCSPRTDILLPKPLESNVVLDVLQIACGVKHAALVT 358

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ +WG    GRLGHG   +++          P L++ L    V   A G  H+  +
Sbjct: 359 RQGEMFTWGEESGGRLGHGVGKNVV---------QPCLVEALASSTVDFVACGEFHTCAV 409

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTS 305
              G +Y +GD   +  L   G       P  I+      ++ +   V CG +HT ++TS
Sbjct: 410 TMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAF---VTCGPWHTALITS 466

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G+L+T+G    G LG G  + +  P  V+               V V+CG  HTAAI E
Sbjct: 467 TGQLFTFGDGTFGVLGHGDRENISYPREVESLSG--------LRTVSVACGVWHTAAIVE 518

Query: 366 ------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
                       GK+ TWG G  +            +LGHG+    + PT ++   +   
Sbjct: 519 VIVTQSSASISSGKLFTWGDGDKN------------RLGHGDKDARLEPTCISALIDYNF 566

Query: 414 LQVSCGFNHTGAL 426
            +++CG + T  L
Sbjct: 567 HRIACGHSLTVGL 579


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   ++ +SCG +H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNL--GVIYISCGDEH 247

Query: 360 TAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA  I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 33/311 (10%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
            G  + +G  +  ++     N    + +P  I  L      Y   + CG  HT VL   G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SE 365
           +++T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + 
Sbjct: 256 KVFTFGDNSSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTT 306

Query: 366 GKILTWGWGGS 376
           G+++++G G S
Sbjct: 307 GQVISFGHGPS 317



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ + +     P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  +  L  +     + G E +  +   GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  + S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL I  LK   V+ IS G  H++ +  DG+++ +G NS+GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 39/257 (15%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ Q       V+
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQ-------VA 187

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENV 411
            G  H+ A+S     ++GWG           +S GQL   G    V    P  +   +N+
Sbjct: 188 AGGAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 412 KALQVSCGFNHTGALLE 428
             + +SCG  HT  L++
Sbjct: 237 GVIYISCGDEHTAVLIQ 253



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++     
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI----- 122

Query: 340 ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 397
            + ++ I   I+ VSCG  H+ A+S + ++ +W            G +S GQLG G +V 
Sbjct: 123 -TTLNGI--KIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVP 167

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               P  V   E +   QV+ G  H+ AL
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFAL 196


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   ++ +SCG +H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNL--GVIYISCGDEH 247

Query: 360 TAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA  I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 33/311 (10%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
            G  + +G  +  ++     N    + +P  I  L      Y   + CG  HT VL   G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SE 365
           +++T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + 
Sbjct: 256 KVFTFGDNSSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTT 306

Query: 366 GKILTWGWGGS 376
           G+++++G G S
Sbjct: 307 GQVISFGHGPS 317



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 39/257 (15%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ Q       V+
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQ-------VA 187

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENV 411
            G  H+ A+S     ++GWG           +S GQL   G    V    P  +   +N+
Sbjct: 188 AGGAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 412 KALQVSCGFNHTGALLE 428
             + +SCG  HT  L++
Sbjct: 237 GVIYISCGDEHTAVLIQ 253



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++     
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI----- 122

Query: 340 ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 397
            + ++ I   I+ VSCG  H+ A+S + ++ +W            G +S GQLG G +V 
Sbjct: 123 -TTLNGI--KIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVP 167

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               P  V   E +   QV+ G  H+ AL
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFAL 196


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 169/370 (45%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ ++CG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  P  I  L+  V +QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L         CG   +  LT+ G ++T G+   G LG G       P  V   
Sbjct: 240 YPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--- 296

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + ++I  V+CG +HT A   S GK+  +G G            S GQLG  +
Sbjct: 297 -----MELMGSTITQVACGNRHTLAFVPSRGKVYAFGLG------------SSGQLGTRS 339

Query: 396 DVDYIHPTIV 405
               + P +V
Sbjct: 340 TKSLMLPQVV 349



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L ++ RP +    + + +  ++CG  H+L L++ G V + G ND GQL
Sbjct: 65  GSNDYSQLG-HDLPTK-RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122

Query: 104 G-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G  +E     L  +    + K VVQI+ G +HS A+T  GELY WG N  GQLG+     
Sbjct: 123 GHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND 182

Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++  G V  WG    G+LG   E       
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+ AA G   S  +   G V+  G  A  ++     ++   P
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT     S G++Y +G   +G LG  S   L  P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 130/287 (45%), Gaps = 44/287 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P ++        +Q + G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P+LI EL+   +   + G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A +K + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             G LG+ S + L   + P R+           +   +  ++CG  H+  IS+   + +G
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRL--------TTLLGIPLAAIACGGNHSFLISKSGAV-FG 221

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           W          G ++ GQLG  ++ +  +PT +     +     +CG
Sbjct: 222 W----------GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACG 258



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 24/138 (17%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
           ++V CG  HT  LT+ G++Y  GSN+   LG       H     +        D +   I
Sbjct: 43  QQVSCGHRHTLFLTATGKVYACGSNDYSQLG-------HDLPTKRPQLIPELQDYV---I 92

Query: 351 VLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG 408
           + +SCG +H+ A+S+ G++L+WG             +  GQLGH  + + +  P +V   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATEKEIVQLPKVVRQL 140

Query: 409 ENVKALQVSCGFNHTGAL 426
            +   +Q++CG NH+ AL
Sbjct: 141 VSKTVVQIACGNNHSLAL 158



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 19/127 (14%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           + SG ELY WGS  +G LG+G I+        Q P++        T++  VSCG +HT  
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPD------TAVQQVSCGHRHTLF 54

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           ++           + G     G +   QLGH  D+    P ++   ++   +Q+SCG  H
Sbjct: 55  LT-----------ATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRH 101

Query: 423 TGALLEY 429
           + AL ++
Sbjct: 102 SLALSDW 108


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 185/439 (42%), Gaps = 101/439 (23%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            A +WG G +G+L   +  S   P V  +F +   + + CG   T  +   G V A G   
Sbjct: 3185 AYMWGGGRHGQLA-ETGRSLLTPTVTPSFSQ--AQQIICGQNCTFVIQANGTVQACGEGS 3241

Query: 100  FGQLGISENIGYSLEPLRI-SGLKKEVV-QISTG---YHHSSAITVDGELYMWGKNSNGQ 154
            +G+LG  +     L  L I S L+  VV Q+ T      HS A+T  GE++ WG    G+
Sbjct: 3242 YGRLG--QGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3299

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G    +    P ++E L G    Q A GF+ S  V+  GK+ ++G G  GRLG G  
Sbjct: 3300 LGHGNSDRQR--RPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNT 3357

Query: 215  SS--------------------------------------------ILGFLRSTSEYTPR 230
            S+                                             LG   ST++ TP+
Sbjct: 3358 SNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQ 3417

Query: 231  LIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISKLP- 288
             +  L G+ VK    G   S  + ++GRV+ FG +R + +   +  NH  RP  +  L  
Sbjct: 3418 RVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNH-NRPQQVPALEA 3476

Query: 289  -YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
             + E+VV G  H+  LTS GE++ WGSN +G LGIG  +    P               C
Sbjct: 3477 FFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREP---------------C 3521

Query: 348  TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
                L            +GK +   W GS+G          GQLG G+      P +V  
Sbjct: 3522 LVTAL------------QGKNVRQVW-GSNG---------DGQLGIGDTNARREPCLVTD 3559

Query: 408  --GENVKALQVSCGFNHTG 424
              G+NV+  Q+S G NH+G
Sbjct: 3560 LQGKNVR--QISAGRNHSG 3576



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 122/289 (42%), Gaps = 37/289 (12%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            E YMWG   +GQL    +  + +  PT     S    +Q   G   +  +   G V + G
Sbjct: 3184 EAYMWGGGRHGQLA---ETGRSLLTPTVTPSFSQ--AQQIICGQNCTFVIQANGTVQACG 3238

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 3239 EGSYGRLGQGNSDDL---------HQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEV 3289

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +GD    K+     +  RRP  I  L   E  ++ CG  H+ V+++ G+L+T+G+ + 
Sbjct: 3290 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDY 3349

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG+G+      PERV        V Q       V CG  HT A+S      W +G   
Sbjct: 3350 GRLGLGNTSNKKIPERVTA-LEGQMVGQ-------VGCGLNHTLAVSADGNTVWSFG--- 3398

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG GN      P  V+    +   +V CG   + AL
Sbjct: 3399 -----DGDY--GKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL 3440


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 182/402 (45%), Gaps = 41/402 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G  E +       A   +++ A+  G  ++L + E G ++  G N  G 
Sbjct: 13  WGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGT 72

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
           LG          P  +  L   ++VQ + G  H  A+  +G  Y WG N  GQ G     
Sbjct: 73  LGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCGEEPER 132

Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G +A +   IPT   C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 133 KEDGTRALRR-DIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWG-----------Q 180

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---L 271
               G ++  S  TP  ++ LE  KV++ A G  H+  + E+G ++ +G+    ++    
Sbjct: 181 PWPPGDIKQIS--TPVRVQGLE--KVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGD 236

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
            Q  +H  R   +S L    ++  GG+H+  LT  GE+Y WG  E+G LG G        
Sbjct: 237 TQPRSHPIRVEGLSDLSLV-DIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMV 295

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P +V+    E         IV VSCG  H+ A++ +G++ ++G  G HG        + G
Sbjct: 296 PLKVELLAGE--------DIVQVSCGGTHSVALTRDGRMFSYG-RGDHGRLGYGRKLTTG 346

Query: 390 QLGHGNDVDYIHP-TIVNFGENVKALQVSCGFNHTGALLEYV 430
           Q   G D+D   P T  +     +A  V+CG  HT A++ + 
Sbjct: 347 QP-MGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAIVVWA 387



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 138/337 (40%), Gaps = 26/337 (7%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            V A G  + GQLG+  N          +     V  +  G  +S AI  DG L+ WG N
Sbjct: 9   AVLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWN 68

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             G LG   K  K    P  V  L+G+   QAA+G    +AV   G   +WG    G+ G
Sbjct: 69  QRGTLGHPPKT-KTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCG 127

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              E    G  R+     P   +    +KV+  AAG  HS  + + G V+ +G       
Sbjct: 128 EEPERKEDG-TRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPPGD 186

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           + Q       P  +  L     +  G +H   LT  G L+ WG+NE G LG G       
Sbjct: 187 IKQ----ISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSH 242

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           P RV+G    S VD       + + GW  TA   +G++  WG  G H           G+
Sbjct: 243 PIRVEGLSDLSLVD-------IAAGGWHSTALTIQGEVYAWG-RGEH-----------GR 283

Query: 391 LGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           LG G+D    + P  V        +QVSCG  H+ AL
Sbjct: 284 LGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVAL 320


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 185/401 (46%), Gaps = 52/401 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 4094 WGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4151

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LG+      +    +E L+   +KK  V +++G  H  A++ DGE++ WG+  +G+LG
Sbjct: 4152 GRLGVGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG    
Sbjct: 4210 HGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD--- 4264

Query: 217  ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+    
Sbjct: 4265 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4318

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P+
Sbjct: 4319 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4378

Query: 333  RV---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
            +V   QG             I+ ++ G  H  A S+ G++ TWG             +  
Sbjct: 4379 KVAALQG-----------KKIISIATGSLHCVACSDAGEVFTWG------------DNDE 4415

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 429
            GQLG G       P +V   +    ++V CG  HT AL  Y
Sbjct: 4416 GQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4456



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 136/265 (51%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +        ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3139 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3198

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L+   VVQ++ G   +    +T DG ++ WG    G+LG G 
Sbjct: 3199 LGHGDNC-TQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG- 3256

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP +V+ L+G+   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3257 -GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV-- 3313

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P  I+ L G KV   A G LH   + ++G+VY +GD   D      GN   
Sbjct: 3314 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTIV 3364

Query: 279  -RRPSLISKLP--YSEEVVCGGYHT 300
             ++PSL+  L   +   V CG  H+
Sbjct: 3365 NKKPSLVLGLDGIFVNRVACGSSHS 3389



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 188/395 (47%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 3032 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3088

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 3089 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3147

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3148 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3203

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L+  +V   A G     + C+ E+G V+ +GD    K+   
Sbjct: 3204 -------NCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG 3256

Query: 274  EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKP 3316

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              +QG   +         ++ V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3317 TPIQGLRGK--------KVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQ 3356

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G GN +    P++V   + +   +V+CG +H+ A
Sbjct: 3357 QGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVA 3391



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 161/353 (45%), Gaps = 64/353 (18%)

Query: 96   GLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
            GLND  QLG             ++   L+P+ I+G  K +  +S           DG+LY
Sbjct: 3034 GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQ----------DGKLY 3083

Query: 146  MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGA 203
              G+ +NG+LGLG      +P P +V  LS    K+ A+  G + ++A+T  GKV SWG 
Sbjct: 3084 ACGEGTNGRLGLGHN--NNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3141

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G  G+LGHG         R T E  P+LI+ L   +++  A G  HSA I  +G +Y +G
Sbjct: 3142 GEDGKLGHGN--------RLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3192

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGC 319
                 ++   +     +P L++ L      +V CG     T  LT  G +++WG  + G 
Sbjct: 3193 LGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGK 3252

Query: 320  LGIGSID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGG 375
            LG G  +   + H  +R+ G             ++ + CG + + A+++ G++ TWG G 
Sbjct: 3253 LGRGGSEGCSIPHQVDRLNG-----------VGVMQIECGAQFSLALTKAGEVWTWGKGD 3301

Query: 376  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +            +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3302 YY------------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3342



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 132/295 (44%), Gaps = 33/295 (11%)

Query: 90  GCVYATGLNDFGQ-LGISENIGYSLE--PLRISGLKKEVVQISTGY--HHSSAITVDGEL 144
            CVY   L D G  L +S  I  + +  P ++ GL+  +VQ++      H  A+   G++
Sbjct: 573 NCVYI--LTDSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDV 630

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y WG    G+LG G  +AK   +PT++  L+         G   S A+T  G++ +WG G
Sbjct: 631 YSWGSGDGGRLGHGDTSAK--ELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRG 688

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIF 262
             GRLGHG          S  +Y P L+  L+  +V   A   G  HS C+ E G  + +
Sbjct: 689 TYGRLGHGN---------SEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           GD    K+  +       P  +  LP +    +V  G   +  LT  G +YTWG    G 
Sbjct: 740 GDGDFGKLGNESCVGTSVPVQVD-LPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGR 798

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
           LG G+ +    P+ VQ    +  VD        ++ G  H  A++    L +GWG
Sbjct: 799 LGHGNSEHSPVPKMVQALEGKKIVD--------LAVGLAHCLALTASGEL-YGWG 844



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 21/227 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD GRLG G   ++  P   +A     +  + CG +++  +T +G +Y  G   +G+
Sbjct: 633 WGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGR 692

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N      P  ++ LK   VV ++   G  HS  +T  G  + WG    G+LG   
Sbjct: 693 LG-HGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNES 751

Query: 160 KAAKVIPIPT---KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                +P+     +  C+  +F+     G + SVA+T  G V +WG G  GRLGHG    
Sbjct: 752 CVGTSVPVQVDLPQASCVVKVFS-----GSQFSVALTREGTVYTWGKGHGGRLGHGN--- 803

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 S     P++++ LEG K+   A G  H   +  +G +Y +G
Sbjct: 804 ------SEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 17/247 (6%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
           A  C G H L L  +G VY+ G  D G+LG  +     L P RI+ L  ++V  +  G  
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKEL-PTRIAALADRQVTGVFCGSS 671

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
           +S+AIT  GELY WG+ + G+LG G    K   +PT V  L        ALG     S+ 
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKY--VPTLVTALKAHRVVHVALGCGDAHSLC 729

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G   +WG G  G+LG+  ES +           P  +   +   V    +G   S 
Sbjct: 730 VTEAGLAFAWGDGDFGKLGN--ESCV-------GTSVPVQVDLPQASCVVKVFSGSQFSV 780

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +   G VY +G     ++      H+  P ++  L   +  ++  G  H   LT+ GEL
Sbjct: 781 ALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGEL 840

Query: 310 YTWGSNE 316
           Y WG N+
Sbjct: 841 YGWGRND 847



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 126/294 (42%), Gaps = 38/294 (12%)

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            V  ++ +WG N   QLG G K +KV  +PT    LS +     A G +    V+  GK+ 
Sbjct: 3026 VSSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3083

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENG 257
            + G G +GRLG G  +++          TP+ +  L    VK  A  +G  H+  +  +G
Sbjct: 3084 ACGEGTNGRLGLGHNNNV---------PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3134

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
            +V+ +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  
Sbjct: 3135 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3194

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI---SEGKILTWG 372
            E G LG G       P+ V               +V V+CG +    +    +G + +WG
Sbjct: 3195 EYGRLGHGDNCTQLKPKLVTALQDH--------RVVQVACGSRDAQTLCLTEDGLVFSWG 3246

Query: 373  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 G F        G+LG G       P  V+    V  +Q+ CG   + AL
Sbjct: 3247 ----DGDF--------GKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLAL 3288



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 103/243 (42%), Gaps = 36/243 (14%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G V SWG+G  GRLGHG  S+         +  P  I  L   +V     G  +
Sbjct: 622 LALASSGDVYSWGSGDGGRLGHGDTSA---------KELPTRIAALADRQVTGVFCGSSY 672

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV-----CGGYHTCVLT 304
           SA I  +G +Y +G     ++          P+L++ L  +  VV     CG  H+  +T
Sbjct: 673 SAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTAL-KAHRVVHVALGCGDAHSLCVT 731

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
             G  + WG  + G LG  S      P +V  P +        + +V V  G + + A++
Sbjct: 732 EAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQA--------SCVVKVFSGSQFSVALT 783

Query: 365 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
            EG + TWG G             GG+LGHGN      P +V   E  K + ++ G  H 
Sbjct: 784 REGTVYTWGKG------------HGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHC 831

Query: 424 GAL 426
            AL
Sbjct: 832 LAL 834



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            A  WG+GD+G+LG  S      PV     +   +  +  G   ++ LT  G VY  G  
Sbjct: 735 LAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 99  DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             G+LG   N  +S  P  +  L+ K++V ++ G  H  A+T  GELY WG+N   Q  +
Sbjct: 795 HGGRLG-HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQ--I 851

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             +     PI T     + I T    L      A  G  + L W    S    HG  + I
Sbjct: 852 CPECVTRDPIIT-----APILTTPPTLRVAGMAA--GVAQSLFWCHSSS----HGIPAKI 900

Query: 218 LGFLRSTSEYTPRLIKEL 235
             F+   SE+T RL+ +L
Sbjct: 901 -PFVVDLSEHTFRLLDQL 917



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 23/137 (16%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           C G H   L S G++Y+WGS + G LG G       P R+      +  D+  T +    
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRI-----AALADRQVTGVF--- 667

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
           CG  ++AAI+  G++ TWG     GT+        G+LGHGN  D   PT+V   +  + 
Sbjct: 668 CGSSYSAAITASGELYTWG----RGTY--------GRLGHGNSEDKYVPTLVTALKAHRV 715

Query: 414 LQVS--CGFNHTGALLE 428
           + V+  CG  H+  + E
Sbjct: 716 VHVALGCGDAHSLCVTE 732


>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 380

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 174/404 (43%), Gaps = 52/404 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           G   YG+LG G +E R  P +C  +  +  +++ +A GG HT  +T  G V+  G N  G
Sbjct: 1   GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+      S    R   L   V  ++ G+  +  +T  G +   G N+ GQLG+G+K 
Sbjct: 61  QLGLGHLADISAL-QRCPSLTHTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKP 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG----GSGRLGHGQESSI 217
                +   VE L       AA G   ++AVT  G+V  WG G        LG    SS+
Sbjct: 120 NFTAEVQV-VESLKAAVVSVAA-GLRHALAVTDSGRVYQWGRGLLSQAKRTLG---PSSV 174

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
              L ST    P  +  L+    ++  AG +H  C+ E+G ++++G     +++      
Sbjct: 175 PPHLGST---VPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQLV------ 225

Query: 278 ARRPSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
           +R P L S +P    ++          G  H    T  G ++TWG    G LG       
Sbjct: 226 SRDPFLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGR-PAPTS 284

Query: 329 HSPER---VQGPFSES--PVD-QICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
            SPE      G   E+  P + +       ++CG +H  AI  G++L+WGW         
Sbjct: 285 RSPESRSTTDGANLEAGLPAEVKALQGATQIACGSEHNLAILAGRLLSWGW--------- 335

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
              +  G  G G+  D   P +V     ++ L + CG  H+ A+
Sbjct: 336 ---NEHGMCGDGSHTDVRQPQLV---PALRPLLIGCGAGHSMAV 373


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   ++ +SCG +H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNL--GVIYISCGDEH 247

Query: 360 TAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA  I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 33/311 (10%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
            G  + +G  +  ++     N    + +P  I  L      Y   + CG  HT VL   G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SE 365
           +++T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + 
Sbjct: 256 KVFTFGDNSSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTT 306

Query: 366 GKILTWGWGGS 376
           G+++++G G S
Sbjct: 307 GQVISFGHGPS 317



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 39/257 (15%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ Q       V+
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQ-------VA 187

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENV 411
            G  H+ A+S     ++GWG           +S GQL   G    V    P  +   +N+
Sbjct: 188 AGGAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 412 KALQVSCGFNHTGALLE 428
             + +SCG  HT  L++
Sbjct: 237 GVIYISCGDEHTAVLIQ 253



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++     
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI----- 122

Query: 340 ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 397
            + ++ I   I+ VSCG  H+ A+S + ++ +W            G +S GQLG G +V 
Sbjct: 123 -TTLNGI--KIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVP 167

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               P  V   E +   QV+ G  H+ AL
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFAL 196


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG + 
Sbjct: 93  GCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 151

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P ++S   + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 209

Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 210 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 260

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
           ++ TP  I  L+G++V+  A G  H+  + + G++Y +G  +  ++     ++   P+ +
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 320

Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           +  K    E   C   HT    T  G++Y WG
Sbjct: 321 TVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L++TE   V+  G+N  G LG  + +  ++E
Sbjct: 47  KWPIFSLCSQEELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD-VQSTIE 105

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G     ++P      
Sbjct: 106 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN 165

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L      + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 166 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 215

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 216 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 275

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V        VD+    
Sbjct: 276 VQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVT-------VDKD-RV 327

Query: 350 IVLVSCGWKHTAA--ISEGKILTWG 372
           I + +C   HT+A     G++  WG
Sbjct: 328 IEIAACHSAHTSAAKTQSGQVYMWG 352



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 108/242 (44%), Gaps = 33/242 (13%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
           VT   +V   G   SG LG G        ++ST E  P+ +  L G K+   + G   H 
Sbjct: 78  VTENDEVFVLGMNCSGCLGTGD-------VQSTIE--PKRLDSLCGKKIACLSYGSGPHV 128

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
               E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS G
Sbjct: 129 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 188

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-G 366
           E+YTWG N +G +G GS      P RV        V       V ++CG   + A+ E G
Sbjct: 189 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV-------VNIACGQMCSMAVVENG 241

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           ++  WG+ G+            GQLG G+  +   P  +   + ++  +V+CG  HT  L
Sbjct: 242 EVYVWGYNGN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVL 289

Query: 427 LE 428
            +
Sbjct: 290 TD 291



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 245 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 304

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  V++I+  +  H S+A T  G++YMWG+   GQ     
Sbjct: 305 QLGTGNKSNQSY-PTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 357

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 358 --SVVLPHLTHFACTDDVF 374



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 45/298 (15%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
           +T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T 
Sbjct: 78  VTENDEVFVLGMNCSGCLGTGDVQSTIEP--KRLDSLCG--KKIACLSYGSGPHVVLATE 133

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG     +LG+G  +  L   + ++    + + E+        A G  HS  + 
Sbjct: 134 EGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEV--------ACGSHHSMVLT 185

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
            +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y 
Sbjct: 186 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 245

Query: 312 WGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           WG N NG LG+GS     +P R+   QG             +  V+CG  HT  ++ EG+
Sbjct: 246 WGYNGNGQLGLGSSGNQPTPCRIAALQG-----------IRVQRVACGCAHTLVLTDEGQ 294

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           I  WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 295 IYAWG------------ANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSA 340


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 168/347 (48%), Gaps = 46/347 (13%)

Query: 44  GNGDYGRLGLG--SLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG  + +S  + +V    +    + +      HTL LT  GC+++ G  D+
Sbjct: 340 GKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIFSWGDGDY 399

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G+LG   ++ +   P  I G   ++ VV +S GY HS+ +T +G+L+ WG+   G+LGLG
Sbjct: 400 GKLGHGSSLTHK-SPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLG 458

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSI 217
              ++ +P+  K    +G        G   ++ +   G  V S+GAG +G+LGHG  S +
Sbjct: 459 DNTSRNVPVLVKDIASAG----SVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRV 514

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV------DKML 271
                    Y P++I+ + G+      AG  +S  ++++G+V+ +G  A       D   
Sbjct: 515 ---------YRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDATF 565

Query: 272 FQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                   +P+LI +L ++   ++  G  H   LT   E+Y WG+N  G  G+G     H
Sbjct: 566 M-------KPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLG-----H 613

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTWG 372
           +   +  P     ++ +  +I  +S G  H    TA  S+  +++W 
Sbjct: 614 TNSPISVPTQVQQLNNV--TIHQISAGTSHSIAYTAMPSDRHVISWS 658



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 92/236 (38%), Gaps = 58/236 (24%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---------- 92
           WG GDYGRLGLG   SR  PV+       S  ++ CG +HTL L + G            
Sbjct: 447 WGEGDYGRLGLGDNTSRNVPVLVKDIA--SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNG 504

Query: 93  --------------------------------YATGLNDFGQ---------LGISENIGY 111
                                           Y+  LND GQ         LG       
Sbjct: 505 KLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDAT 564

Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            ++P  I  L    VV I++G  H  A+T + E+Y WG N+ GQ GLG   +  I +PT+
Sbjct: 565 FMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSP-ISVPTQ 623

Query: 171 VECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILGFLRS 223
           V+ L+ +   Q + G   S+A T       V+SW       L       +  FL S
Sbjct: 624 VQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPYCVDLSESTFKKMNNFLSS 679



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 166/374 (44%), Gaps = 69/374 (18%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY- 132
           + L  G   T  ++  GCV + G   +G+LG+ ++   S     +    + + +IS+   
Sbjct: 318 QMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKG 377

Query: 133 --HHSSAITVDGELYMWGKNSNGQLG----LGKKAAKVI--PIPTK-VECLSGIFTKQAA 183
              H+ A+T +G ++ WG    G+LG    L  K+ K+I  P+  + V C+S        
Sbjct: 378 SDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSA------- 430

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G+  S  VT  G++ +WG G  GRLG G          +TS   P L+K+       IA
Sbjct: 431 -GYRHSACVTQEGQLFTWGEGDYGRLGLGD---------NTSRNVPVLVKD-------IA 473

Query: 244 AAGFL-----HSACIDENG-RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVC 295
           +AG +     H+  + ++G  V+ FG     K+   + +   RP +I  +      ++  
Sbjct: 474 SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCA 533

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVS 354
           G  ++  L   G++++WG     CLG GS D              + +D++  T +V ++
Sbjct: 534 GSQYSLALNDSGQVFSWGC--GACLGCGSPDATF--------MKPTLIDELTFTRVVDIT 583

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ--LGHGNDVDYIHPTIVNFGENV 411
            G  H  A++   ++  W            G+++ GQ  LGH N    + PT V    NV
Sbjct: 584 SGDGHCMALTHNNEVYCW------------GNNAMGQCGLGHTNSPISV-PTQVQQLNNV 630

Query: 412 KALQVSCGFNHTGA 425
              Q+S G +H+ A
Sbjct: 631 TIHQISAGTSHSIA 644



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 18/228 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG GS  +   P ++     +  +  ++ G  H+  +T+ G ++  G  D+G
Sbjct: 394 WGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYG 453

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW--GKNSNGQLGLGK 159
           +LG+ +N   ++ P+ +  +      +  G  H+  +  DG L +W  G   NG+LG G 
Sbjct: 454 RLGLGDNTSRNV-PVLVKDIAS-AGSVVCGSSHTLVLAQDG-LTVWSFGAGDNGKLGHGD 510

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +   +  P  +E ++G+   +   G + S+A+   G+V SWG G    LG G   +   
Sbjct: 511 TSR--VYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGAC--LGCGSPDAT-- 564

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           F++      P LI EL   +V    +G  H   +  N  VY +G+ A+
Sbjct: 565 FMK------PTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAM 606



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 83/363 (22%)

Query: 121 LKKEVVQISTGYHHSSAITV-------DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           L ++VV +S  Y  S   T        + ++Y WG NS+ QL   +  +  I  P KV+ 
Sbjct: 256 LMEQVVSLSEEYAISCTETATKSVDMNNCDVYAWGSNSSHQLA--ELGSDKIVFPKKVKS 313

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
                ++    G   + AV+G G V S G G  GRLG G +S+    L++     P+ I+
Sbjct: 314 FGN--SQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLG-DSNNQSTLKTIVFDPPQTIR 370

Query: 234 ELEGVK------------------------------------------------VKIAAA 245
           ++   K                                                V   +A
Sbjct: 371 KISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSA 430

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G+ HSAC+ + G+++ +G+    ++   +      P L+  +  +  VVCG  HT VL  
Sbjct: 431 GYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAGSVVCGSSHTLVLAQ 490

Query: 306 GG-ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            G  ++++G+ +NG LG G    ++ P+ ++   +     ++C        G +++ A++
Sbjct: 491 DGLTVWSFGAGDNGKLGHGDTSRVYRPKVIES-INGMMFYKLC-------AGSQYSLALN 542

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           + G++ +WG G   G  S D               ++ PT+++     + + ++ G  H 
Sbjct: 543 DSGQVFSWGCGACLGCGSPDA-------------TFMKPTLIDELTFTRVVDITSGDGHC 589

Query: 424 GAL 426
            AL
Sbjct: 590 MAL 592


>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
           CCMP2712]
          Length = 312

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 150/313 (47%), Gaps = 25/313 (7%)

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLK-K 123
           S    H +  +A GG HTLFLT+ G V A G ND  QLG   E      EP ++S L+ K
Sbjct: 1   SLLAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWK 60

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            VV+++ G  H+    +DG +Y WG  S+G+LGLG    K +P P KV  L        A
Sbjct: 61  RVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGN--FKSVPQPCKVSGLGEERCVSVA 118

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKI 242
            G+  S AV  GGK+ +WG G  G+LG G+  S            P  ++E   G + + 
Sbjct: 119 AGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCC---------EPVQVEEPGNGQRWRA 169

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHT 300
              G  HS  + + G ++ +G     ++   +     RP  IS+L  ++     CG    
Sbjct: 170 VRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFN 229

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             +++G ++++WG+N  G LG G  D +   E      S  P+      ++ VSCG +H 
Sbjct: 230 VAISNGSQVFSWGNNRYGQLGHG--DKVEQIEETLRSGSHGPL------VLSVSCGGRHV 281

Query: 361 AAIS-EGKILTWG 372
             +  +G+I  WG
Sbjct: 282 LGLDRKGRIWAWG 294



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 126/269 (46%), Gaps = 24/269 (8%)

Query: 59  RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
           RW+ VV           +ACG AH L     G VY+ GL   G+LG+  N     +P ++
Sbjct: 58  RWKRVV----------EMACGDAHNLVRCLDGSVYSWGLGSSGRLGLG-NFKSVPQPCKV 106

Query: 119 SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           SGL +E  V ++ GY+HS A+   G+L+ WG  + GQLG GK  +   P+  + E  +G 
Sbjct: 107 SGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVE-EPGNGQ 165

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +    G   S+ +T  G + SWG    G+LGHG E              P+ I EL G
Sbjct: 166 RWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERC---------GRPKGISELVG 216

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVC 295
            K+   + G   +  I    +V+ +G+    ++   +       +L S    P    V C
Sbjct: 217 TKISCFSCGPNFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSC 276

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           GG H   L   G ++ WG NE+GCLGIG 
Sbjct: 277 GGRHVLGLDRKGRIWAWGCNESGCLGIGD 305



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 33/303 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VVQ++ G  H+  +T  G +   G+N   QLG G +  +  P P +V  L      + A 
Sbjct: 8   VVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRVVEMAC 67

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++     G V SWG G SGRLG       LG  +S  +  P  +  L   +    A
Sbjct: 68  GDAHNLVRCLDGSVYSWGLGSSGRLG-------LGNFKSVPQ--PCKVSGLGEERCVSVA 118

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTC 301
           AG+ HS  + E G+++ +G+    ++   +      P  + +    +    V  G YH+ 
Sbjct: 119 AGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRGGEYHSL 178

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +T  G L++WG N +G LG G  +    P+ +         + + T I   SCG     
Sbjct: 179 GMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGIS--------ELVGTKISCFSCGPNFNV 230

Query: 362 AISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           AIS G ++ +W            G++  GQLGHG+ V+ I  T+ +       L VSCG 
Sbjct: 231 AISNGSQVFSW------------GNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGG 278

Query: 421 NHT 423
            H 
Sbjct: 279 RHV 281



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  GRLGLG+ +S  +P   S   +    ++A G  H+  + E G ++A G    GQ
Sbjct: 84  WGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQ 143

Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG  +      EP+++   G  +    +  G +HS  +T  G L+ WG N++GQLG G +
Sbjct: 144 LGTGK-FESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDE 202

Query: 161 AAKVIP------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                P      + TK+ C S         G   +VA++ G +V SWG    G+LGHG +
Sbjct: 203 ERCGRPKGISELVGTKISCFS--------CGPNFNVAISNGSQVFSWGNNRYGQLGHGDK 254

Query: 215 -SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              I   LRS S           G  V   + G  H   +D  GR++ +G
Sbjct: 255 VEQIEETLRSGS----------HGPLVLSVSCGGRHVLGLDRKGRIWAWG 294



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G  E   RP   S      +   +CG    + ++    V++ G N +GQ
Sbjct: 189 WGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNNRYGQ 248

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  + +    E LR       V+ +S G  H   +   G ++ WG N +G LG+G    
Sbjct: 249 LGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRIWAWGCNESGCLGIGDNIP 308

Query: 163 KVIP 166
           ++ P
Sbjct: 309 RLAP 312


>gi|256075111|ref|XP_002573864.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
           mansoni]
 gi|360044963|emb|CCD82511.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
           mansoni]
          Length = 414

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 187/422 (44%), Gaps = 48/422 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G  +  + P + +  +  +L  ++ GG H+L   E   +++ GLN  GQ
Sbjct: 4   WGANSHGQLGTGDDKDAYEPKIINFTDPVAL--ISGGGGHSLISNENN-IFSCGLNSVGQ 60

Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG S +   + + P   +     V ++S G+  S A+  DG ++ WG N  GQLG     
Sbjct: 61  LGRSNDCNHFKIIPFSFA---PTVHKVSCGWDFSVAVLSDGSVFSWGSNEYGQLGKESIN 117

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           + ++P+   +E +  I     + G    V+VT  GK+  WG+    +L   +  +     
Sbjct: 118 SSIVPVRIDIEPVRSI-----SAGLRHVVSVTISGKLFGWGSNRRKQLFVDKVLNKAEHY 172

Query: 222 RSTSE--YTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
             + +  Y P L+  + G   +    AAG  HS       ++ +FGD    K+  +  + 
Sbjct: 173 DESKQICYRPTLLNSVLGDTHEWVDCAAGAYHSVARTRTNKLALFGDTRFFKLKSEVHDL 232

Query: 278 A--RRPSLISKLPYS---------EEVVCGGYHTCVLTSGGELYTWGSNENGCLG----- 321
           +      L S + Y          E+VVCG  H  V TS GE+Y+WG ++ G LG     
Sbjct: 233 SLNTESRLSSPIWYDAELFGNNKVEQVVCGWSHVLVRTSVGEVYSWGRSDFGQLGRTVNI 292

Query: 322 ----IG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGG 375
               IG S ++  + +   G       D    ++  ++CG +H+ AI S G++  WGW  
Sbjct: 293 LSKFIGKSNEIFPNFDAYPGKVHFHLNDGHEVTVKTIACGSEHSLAIDSNGQLWVWGW-N 351

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--------FGENVKALQVSCGFNHTGALL 427
            HG       ++     HG   + I P I          F +N K   + CG+ H+ A +
Sbjct: 352 EHGMCGVITKTASQIEQHGTQEEVI-PYITQPYRISFRCFNQNYKVKYIGCGYGHSMAYV 410

Query: 428 EY 429
           E+
Sbjct: 411 EF 412



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 27/231 (11%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +L+WGA   G+LG G +            Y P++I   + V +     G  HS   +EN 
Sbjct: 1   MLTWGANSHGQLGTGDDK---------DAYEPKIINFTDPVALISGGGG--HSLISNEN- 48

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            ++  G  +V ++      +  +    S  P   +V CG   +  + S G +++WGSNE 
Sbjct: 49  NIFSCGLNSVGQLGRSNDCNHFKIIPFSFAPTVHKVSCGWDFSVAVLSDGSVFSWGSNEY 108

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGS 376
           G LG  SI+    P R+       PV  I       S G +H  +++  GK+  WG    
Sbjct: 109 GQLGKESINSSIVPVRID----IEPVRSI-------SAGLRHVVSVTISGKLFGWGSNRR 157

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 425
              F +   +          + Y  PT++N   G+  + +  + G  H+ A
Sbjct: 158 KQLFVDKVLNKAEHYDESKQICY-RPTLLNSVLGDTHEWVDCAAGAYHSVA 207


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 136/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           NG+ G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   NGESGKPIRATLSSLKMLDVGKWPMFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + I  ++EP ++  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-IQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +      KV +  A G + S  + + G V+++G     ++
Sbjct: 187 GS---------TANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  I+ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
             P  V        V +    I + +C   HT+A     G +  WG
Sbjct: 298 SYPTPV--------VVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDIQSTIE--PRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G             IV ++CG   + A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNK-------VIVTIACGQMCSMAVVDTGEVFVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  +   + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD 274



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  V++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPYLTHFSCTDDVF 357


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 155/345 (44%), Gaps = 41/345 (11%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKE-VVQISTGY 132
           A GG H+L +   G V+A G N  GQLGI  N   SL P+R+   SG     V++++ G 
Sbjct: 61  AGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKA-SLSPVRVMHKSGAPLNGVLKVAAGE 119

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT---KVECLSGIFTKQAALGFEQS 189
            HS A+T  GE++ WG NS GQLG G    +  P+     +   L  I    AA G + S
Sbjct: 120 RHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVG--AACGGKHS 177

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +AV   G V +WG+   G++G G   +     R       R  K L GVK    AAGF H
Sbjct: 178 LAVASDGTVWAWGSNSDGQIGDGTLKN-----RQNPRQVMRFGKPLAGVKA--VAAGFAH 230

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLISKLPYSEEVVCGGYHTCVLT 304
           S  +  +G V+ +GD    ++        + P     S+   L     +  G   +  LT
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI-CTSIVLVSCGWKHTAAI 363
             GE++ WG+N  G LG+G  +       V+ P      + +    +  ++   +H+ A+
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGF-----VRDPLPVRAANGVPLKGVRAITANGRHSLAL 345

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
            ++G +L WG G              GQLG G      HPT+ + 
Sbjct: 346 MNDGSVLAWGAGDR------------GQLGQGAQNHEDHPTLASL 378



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 137/300 (45%), Gaps = 32/300 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---ACGGAHTLFLTETGCVYATGLND 99
           WG+   G+LG G    R  PV       + L+ +   ACGG H+L +   G V+A G N 
Sbjct: 134 WGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNS 193

Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ+G    +N     + +R       V  ++ G+ HS A++VDG ++ WG N  GQLG 
Sbjct: 194 DGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWGDNEFGQLGD 253

Query: 158 GKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                +  P+    +    L  +    A   F  S+A+T  G+V +WG  G G+LG G  
Sbjct: 254 CSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAF--SLALTRDGEVWAWGNNGVGQLGMGPH 311

Query: 215 SSILGFLRSTSEYTPRLIKELEGVK---VKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           +   GF+R      P  ++   GV    V+   A   HS  +  +G V  +G  A D+  
Sbjct: 312 N---GFVRD-----PLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWG--AGDRGQ 361

Query: 272 FQEG--NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             +G  NH   P+L S       V+C   G YH+  +   G +  WG N+ G LGIG  D
Sbjct: 362 LGQGAQNHEDHPTLASL----HSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGKAD 417



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 159/349 (45%), Gaps = 42/349 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G+LG+G+ ++   PV     S    + +  +A G  H+L LT  G V+  G N 
Sbjct: 79  WGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNS 138

Query: 100 FGQLGISENIGYSLE---PLRISGLK----KEVVQISTGYHHSSAITVDGELYMWGKNSN 152
            GQLG     G+  E   P+++  ++    + +V  + G  HS A+  DG ++ WG NS+
Sbjct: 139 KGQLG----DGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSD 194

Query: 153 GQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           GQ+G G    +  P       + L+G+  K  A GF  S+A++  G V +WG    G+LG
Sbjct: 195 GQIGDGTLKNRQNPRQVMRFGKPLAGV--KAVAAGFAHSLALSVDGTVWAWGDNEFGQLG 252

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              +       ++  +    + + L+ V V I AAG   S  +  +G V+ +G+  V ++
Sbjct: 253 DCSDYD----RKAPVQVMHSVDRPLDNV-VAI-AAGRAFSLALTRDGEVWAWGNNGVGQL 306

Query: 271 LFQEGNHARRPSLISK------LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
                N   R  L  +      L     +   G H+  L + G +  WG+ + G LG G+
Sbjct: 307 GMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLGQGA 366

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
            +             + P      S++ ++ G  H+ A++E G +L WG
Sbjct: 367 QN-----------HEDHPTLASLHSVICLAAGRYHSLAVAENGAVLAWG 404



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 30/230 (13%)

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
           AA G   S+ V   G V +WG   SG+LG G   + L  +R   +        L GV +K
Sbjct: 60  AAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSG----APLNGV-LK 114

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEV--VCG 296
           + AAG  HS  +   G V+ +GD +  ++    F E     +   I   P    V   CG
Sbjct: 115 V-AAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACG 173

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G H+  + S G ++ WGSN +G +G G++    +P +V          +    +  V+ G
Sbjct: 174 GKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVM------RFGKPLAGVKAVAAG 227

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           + H+ A+S +G +  W            G +  GQLG  +D D   P  V
Sbjct: 228 FAHSLALSVDGTVWAW------------GDNEFGQLGDCSDYDRKAPVQV 265



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 25/193 (12%)

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSE--EVVCG 296
           IAA G  HS  +  +G V+ +GD +  ++       +  P  +   S  P +   +V  G
Sbjct: 59  IAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAG 118

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             H+  LT+ GE++TWG N  G LG G      SP +V+     +P++    +IV  +CG
Sbjct: 119 ERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRH-IRTNPLE----NIVGAACG 173

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKAL 414
            KH+ A+ S+G +  W WG           +S GQ+G G   +  +P  ++ FG+ +  +
Sbjct: 174 GKHSLAVASDGTV--WAWGS----------NSDGQIGDGTLKNRQNPRQVMRFGKPLAGV 221

Query: 415 Q-VSCGFNHTGAL 426
           + V+ GF H+ AL
Sbjct: 222 KAVAAGFAHSLAL 234



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 43  WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLN 98
           WGN   G+LG+G      R P+   A     LK   A+   G H+L L   G V A G  
Sbjct: 298 WGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAG 357

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           D GQLG      +   P   S     V+ ++ G +HS A+  +G +  WG N  GQLG+G
Sbjct: 358 DRGQLGQGAQ-NHEDHPTLAS--LHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414

Query: 159 KKAAKVIPIPTK 170
           K       +P K
Sbjct: 415 KADKNFHALPEK 426


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 155/355 (43%), Gaps = 44/355 (12%)

Query: 43  WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGNGD GRLG G     ++   V+   +  H        G H + LT  G VY+ G  D 
Sbjct: 215 WGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHP------EGKHYMALTSEGEVYSWGNGDG 268

Query: 101 GQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG  +      EP  + GL      + VV I  G  +S+AIT DGEL+ WG+ + G+L
Sbjct: 269 GRLGHGDTNSRE-EPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRL 327

Query: 156 GLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           G G    ++   PT V  L G  +       G  Q++AVT  G V SWG G  G+LG G 
Sbjct: 328 GHGSSEDQL--TPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGG 385

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    S    TP++I  L+G  +     G   S  + + G ++ +G     ++   
Sbjct: 386 ---------SDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHG 436

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              H R P  +  L   +  +V  G  H  V+T  GE+Y WG N+ G LG  S      P
Sbjct: 437 TEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDP 496

Query: 332 ERVQGPFSESPVDQICTSIVLVSCG------WKHTAAISEGKILTWGWGGSHGTF 380
             +       P+D    SI  ++CG      W  T   S G  + +     HGTF
Sbjct: 497 TLM-------PLD--GKSISGIACGPAQSFCWTSTGHWSVGLRVPFVVDVCHGTF 542



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 174/381 (45%), Gaps = 58/381 (15%)

Query: 55  SLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYS 112
           S ES+   ++ S  +K  LK  A   G H + LT  G VY+ G  D G+LG  + N+ Y 
Sbjct: 174 SSESQGPQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYK 233

Query: 113 LEPLRISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
                     ++V+ I   YH    H  A+T +GE+Y WG    G+LG G   ++    P
Sbjct: 234 ---------GQKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSR--EEP 282

Query: 169 TKVECLSGIFTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           T V  LSG    +  +    G   S A+T  G++ +WG G  GRLGHG          S 
Sbjct: 283 TLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGS---------SE 333

Query: 225 SEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + TP L+  L+G +V      +G   +  + ++G V+ +GD    K+     +  + P 
Sbjct: 334 DQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPK 393

Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +I +L   +   V CG   +  LT  G ++TWG  ++  LG G+ + +  P++++G   +
Sbjct: 394 IIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGK 453

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
             VD        V+ G  H   ++ EG++  W            G +  GQLG  +    
Sbjct: 454 KVVD--------VAVGSMHCLVMTEEGEVYGW------------GRNDQGQLGDSSFSTK 493

Query: 400 IHPTIVNF-GENVKALQVSCG 419
             PT++   G+++    ++CG
Sbjct: 494 SDPTLMPLDGKSISG--IACG 512



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 157/386 (40%), Gaps = 76/386 (19%)

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
            C    +  +  LAC     + LT+TG VY    +       SE+ G  L     S   K
Sbjct: 140 TCEMLGELGVLQLACAERCLIALTKTGRVYMCFYS-------SESQGPQLME---SLADK 189

Query: 124 EVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPI--PTKVECL 174
           EV++++      H  A+T +GE+Y WG    G+LG G      K  KV+ I  P   E  
Sbjct: 190 EVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHPEG- 248

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                       +  +A+T  G+V SWG G  GRLGHG          + S   P L++ 
Sbjct: 249 ------------KHYMALTSEGEVYSWGNGDGGRLGHGD---------TNSREEPTLVRG 287

Query: 235 LEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
           L G +    V     G  +SA I  +G ++ +G     ++          P+L+  L   
Sbjct: 288 LSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGR 347

Query: 291 E--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPV 343
              ++ CG     T  +T  G +++WG  + G LG G  D   +P   +R+QG       
Sbjct: 348 RVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQG------- 400

Query: 344 DQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 IV V CG + + A+++ G I TWG G S             +LGHG +     P
Sbjct: 401 ----QDIVRVCCGAQFSLALTKTGHIWTWGKGDSQ------------RLGHGTEEHIRFP 444

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
             +      K + V+ G  H   + E
Sbjct: 445 KQLEGLRGKKVVDVAVGSMHCLVMTE 470


>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
           musculus]
 gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
          Length = 972

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 166/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 265 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 307

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 308 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 351

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 352 GLLYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 42/254 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYH 239

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQV 416
           +A ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV
Sbjct: 240 SAFVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQV 286

Query: 417 SCGFNHTGALLEYV 430
           +CG  HT  L E V
Sbjct: 287 ACGGGHTVVLTEKV 300



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 41/199 (20%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E         + 
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPE--------KVK 128

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGE 409
           L +CG  HT       +++   GG +      G ++ GQLG G  +D D  H  IV F  
Sbjct: 129 LAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTP 176

Query: 410 NVKALQVSCGFNHTGALLE 428
                Q+S G N + AL E
Sbjct: 177 ADTIKQLSAGANTSAALTE 195



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 17/295 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+  SR  PV  +  +K  + A+  GG H L +   G V+A G N FGQ
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQ 1237

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P+R+ GL   V  ++ G HHS A+  DG L  WG N+ GQLG G    
Sbjct: 1238 LG-DGTAESRLLPVRVEGLSN-VTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTT 1295

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +   +   V+ + G+   +A  G   ++A+ G G V +WG     +LG G +S+      
Sbjct: 1296 RYSRV--WVKGVDGVVEVRA--GAAHTLALRGDGTVWTWGDNTHSQLGAGDDST------ 1345

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
              +   PR +  L GV      AG  HS  +   G V+ +G  +  ++   +  +   P 
Sbjct: 1346 -RTRIVPRPVPGLSGVTA--IGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPL 1402

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L     V  G   +  +   G + +WGS+ +G LG+G+     SP +V  P
Sbjct: 1403 RVKELAEVSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVALP 1457



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 178/392 (45%), Gaps = 50/392 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG GS      PV     E   + +++ G A +L + + G  +A G N  GQ
Sbjct: 924  WGANGSGQLGEGSTTPSPTPVRVKGLE--GVASVSAGRAFSLAVRQDGTAWAWGANPSGQ 981

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG   N    + P +++ +K+ V  +S G HH  A+  DG ++ WG N+ GQLG G  A 
Sbjct: 982  LGDGTNHSQRV-PKQVTSVKR-VRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAP 1039

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              +  P +V  L  +  +  A G + SVAV  GG   +WG+   G+LG G+    L    
Sbjct: 1040 TWM-WPRQVPELRDV--EAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRL---- 1092

Query: 223  STSEYTPRLIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                 TP  ++ +E  K    V+   A   H+  +  +G V  +GD A  ++   +G   
Sbjct: 1093 -----TPVQVR-IEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQL--GDGTTE 1144

Query: 279  RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RR  P ++  L     V  G +H+  L S G ++ WG+N  G LG G+     +P RV G
Sbjct: 1145 RRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAG 1204

Query: 337  PFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                         +V +  G  H  A+ S+G +  W            G+++ GQLG G 
Sbjct: 1205 ----------LQKVVAIGAGGYHALAVRSDGSVWAW------------GYNAFGQLGDGT 1242

Query: 396  DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                + P  V    NV +  V+ G +H+ ALL
Sbjct: 1243 AESRLLPVRVEGLSNVTS--VAGGDHHSLALL 1272



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 153/360 (42%), Gaps = 39/360 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G      R           + ++  G AH+L L E G V+A G N  GQ
Sbjct: 73  WGGNTSGQLG-GEATPLQRLAPAPLPSPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQ 131

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P++++GL  +VV ++ G  HS A+  DG ++ WG N +GQLG G    
Sbjct: 132 LGDGTTT-DRVTPMQVAGL-TDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEP 189

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P P  V  L G+    A  GF+ ++AV   G V +WGA  SG+LG G          
Sbjct: 190 GLTPEP--VPGLEGVVALAA--GFDFTLAVMDDGTVRAWGANSSGQLGDGT--------- 236

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P  +  + G+      AG  H+  + ++G V+ +G  +  ++     +    P+
Sbjct: 237 FTQRLAPVEVAHISGISA--VTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPA 294

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L   + V      +  L   G +  WG+N +G LG    D   +P  V G      
Sbjct: 295 RVPGLERVKAVASMDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPG------ 348

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 S+  V  G +H  A+  G    W WGG             GQLGHG    ++ P
Sbjct: 349 ----LRSVAAVVGGAQHALAL-RGDGTLWAWGGGL----------AGQLGHGGSERHVVP 393



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 172/385 (44%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS   R RPV  S     S+ A+A GG+HT+ L   G V+A G N  GQ
Sbjct: 474 WGRNAAGQLGDGSTRDRARPVAVSGLT--SVVAVATGGSHTMALRGDGTVWAWGYNALGQ 531

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+R++ L   VV ++ G + S A+  DG ++ WG+   GQ+G G    
Sbjct: 532 LGDGTTV-DRLTPVRVARLDS-VVAVAAGTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQ 589

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +   + A G   ++AV G G V +WG  G G+LG G  S       
Sbjct: 590 RLFPV--QVAGLTNV--TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWS------- 638

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P  +  L G+     + G  HS  +  +G V  +G     ++         RP+
Sbjct: 639 --DRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPA 694

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           ++  L   + +     H   L + G L  WG N  G LG+G+      P +V+G      
Sbjct: 695 VVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRG---LGR 751

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
           VD++         G  HT  +  +G +L W            G ++ GQLG G       
Sbjct: 752 VDRLA-------VGRAHTLMVRPDGAVLAW------------GENASGQLGDGTTTHRAG 792

Query: 402 PTIVNFGENVKALQVSCGFNHTGAL 426
           P +V     V++  V+ G  H+ AL
Sbjct: 793 PVLVRGVPCVRS--VASGVLHSLAL 815



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 144/331 (43%), Gaps = 30/331 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P      E+  +KA+A   A +L L E G V A G N  GQ
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLER--VKAVASMDASSLALLEAGSVLAWGANGSGQ 331

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG S     +  P  + GL+  V  +  G  H+ A+  DG L+ WG    GQLG G    
Sbjct: 332 LGDSGTDDRA-TPGEVPGLRS-VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSER 389

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V+P P     L        A G   S+A  G G V SWG    G+LG G  +     +R
Sbjct: 390 HVVPAP----LLRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVR 445

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                    ++ L G++  +AA+G  HS  +  +G V+ +G  A  ++         RP 
Sbjct: 446 ---------VEGLSGIR-GVAASGH-HSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPV 494

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     V  GG HT  L   G ++ WG N  G LG G+     +P RV        
Sbjct: 495 AVSGLTSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRV-------- 546

Query: 343 VDQICTSIVLVSCGWKHTAAIS-EGKILTWG 372
                 S+V V+ G   + A+  +G + TWG
Sbjct: 547 --ARLDSVVAVAAGTYFSMALRGDGTVWTWG 575



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 155/353 (43%), Gaps = 43/353 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G  H+L+++ TG V+A G N  GQLG        L P  +    +++V + +G  HS
Sbjct: 54  IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPS-PRDIVSVVSGEAHS 112

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG NS+GQLG G    +V P+  +V  L+ +     A G   S+A+ G 
Sbjct: 113 LALDEAGTVWAWGGNSSGQLGDGTTTDRVTPM--QVAGLTDVVA--VAAGDFHSLALRGD 168

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G     L         TP  +  LEGV     AAGF  +  + +
Sbjct: 169 GTVWAWGTNFHGQLGRGHTEPGL---------TPEPVPGLEGVVAL--AAGFDFTLAVMD 217

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +G V  +G  +  ++   +G   +R  P  ++ +     V  G YH   L   G ++TWG
Sbjct: 218 DGTVRAWGANSSGQL--GDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVWTWG 275

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
           +N +G LG G+      P RV G      V  +  S +         A +  G +L WG 
Sbjct: 276 ANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSL---------ALLEAGSVLAWGA 326

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            GS            GQLG     D   P  V    +V A  V  G  H  AL
Sbjct: 327 NGS------------GQLGDSGTDDRATPGEVPGLRSVAA--VVGGAQHALAL 365



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 174/395 (44%), Gaps = 44/395 (11%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
            Q   A  WG    G+LG G+  S+  P   ++ ++  ++A++ G  H + L E G V+  
Sbjct: 967  QDGTAWAWGANPSGQLGDGTNHSQRVPKQVTSVKR--VRAMSAGAHHVVALGEDGAVWTW 1024

Query: 96   GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            G N  GQLG   +    + P ++  L+ +V  ++ G   S A+ V G  + WG N  GQL
Sbjct: 1025 GDNTLGQLGDGTSAPTWMWPRQVPELR-DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQL 1083

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQE 214
            G GK   ++ P+  ++E        +    + Q +VA+   G V +WG    G+LG G  
Sbjct: 1084 GDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT- 1142

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                    +     P +++ L GV     + G  HS  +  +G V+ +G     ++   +
Sbjct: 1143 --------TERRAAPVVVRGLTGVVA--VSTGAWHSLALRSDGTVWAWGANGFGQL--GD 1190

Query: 275  GNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            G    R  P  ++ L     +  GGYH   + S G ++ WG N  G LG G+ +    P 
Sbjct: 1191 GTTLSRTTPVRVAGLQKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPV 1250

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQL 391
            RV+G           +++  V+ G  H+ A +++G +  W            G+++ GQL
Sbjct: 1251 RVEG----------LSNVTSVAGGDHHSLALLADGSLGAW------------GNNAAGQL 1288

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G G          V   + V  ++V  G  HT AL
Sbjct: 1289 GDGTGTTRYSRVWVKGVDGV--VEVRAGAAHTLAL 1321



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 170/389 (43%), Gaps = 46/389 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  SR  P      +     A       +L L   G  +A G N  GQ
Sbjct: 824  WGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQ 881

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       ++ P ++  L   ++ ++ G  H  A   DG L+ WG N +GQLG G    
Sbjct: 882  LGDGSTSDRAV-PGQLK-LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP 939

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               P P +V+ L G+ +  A   F  S+AV   G   +WGA  SG+LG G          
Sbjct: 940  S--PTPVRVKGLEGVASVSAGRAF--SLAVRQDGTAWAWGANPSGQLGDG---------- 985

Query: 223  STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
              + ++ R+ K++  VK V+  +AG  H   + E+G V+ +GD  + ++   +G  A   
Sbjct: 986  --TNHSQRVPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGDNTLGQL--GDGTSAPTW 1041

Query: 281  --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
              P  + +L   E V  G   +  +  GG  + WGSNE G LG G      +P +V+   
Sbjct: 1042 MWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVR--I 1099

Query: 339  SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
              S + Q   ++   +   +H  A+ ++G +  WG         ++ H   GQLG G   
Sbjct: 1100 EASKLRQPVRTVRAWA---QHAVALMADGTVQAWG---------DNAH---GQLGDGTTE 1144

Query: 398  DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                P +V     V A  VS G  H+ AL
Sbjct: 1145 RRAAPVVVRGLTGVVA--VSTGAWHSLAL 1171



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 155/368 (42%), Gaps = 41/368 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            WG+ +YG+LG G    R  PV   + ++  +  ++ +     H + L   G V A G N 
Sbjct: 1075 WGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNA 1134

Query: 100  FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
             GQLG          P+ + GL   VV +STG  HS A+  DG ++ WG N  GQLG G 
Sbjct: 1135 HGQLG-DGTTERRAAPVVVRGLTG-VVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGT 1192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++  P+  +V  L  +    A  G   ++AV   G V +WG    G+LG G   S L 
Sbjct: 1193 TLSRTTPV--RVAGLQKVVAIGA--GGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRL- 1247

Query: 220  FLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                       L   +EG+  V   A G  HS  +  +G +  +G+ A  ++    G   
Sbjct: 1248 -----------LPVRVEGLSNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTR 1296

Query: 279  RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
                 +  +    EV  G  HT  L   G ++TWG N +  LG G        +  +   
Sbjct: 1297 YSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGD-------DSTRTRI 1349

Query: 339  SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
               PV  + + +  +  G +H+ A+   K   W W          G +S GQLG G++ +
Sbjct: 1350 VPRPVPGL-SGVTAIGAGARHSFAVGP-KGTVWAW----------GRNSHGQLGLGDNAN 1397

Query: 399  YIHPTIVN 406
               P  V 
Sbjct: 1398 RAEPLRVK 1405



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 51/297 (17%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI---PIPTKVECLSGIFTKQA 182
           ++I+ G  HS  ++  G ++ WG N++GQLG      + +   P+P+  + +S +  +  
Sbjct: 52  MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAH 111

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           +L  +++      G V +WG   SG+LG G          +T   TP  +  L    V  
Sbjct: 112 SLALDEA------GTVWAWGGNSSGQLGDGT---------TTDRVTPMQVAGL--TDVVA 154

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEEVV---CGGY 298
            AAG  HS  +  +G V+ +G         Q G     P L  + +P  E VV    G  
Sbjct: 155 VAAGDFHSLALRGDGTVWAWG----TNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFD 210

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
            T  +   G +  WG+N +G LG G+     +P  V             + I  V+ G  
Sbjct: 211 FTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEV----------AHISGISAVTAGTY 260

Query: 359 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           H  A+  +G + TW            G +S GQLG G   D   P  V   E VKA+
Sbjct: 261 HAVALGKDGGVWTW------------GANSSGQLGDGAWSDRAVPARVPGLERVKAV 305



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 22/153 (14%)

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           E   A R   I+       +  G  H+  ++  G ++ WG N +G LG G    L   +R
Sbjct: 35  EQPRAARTQRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLG-GEATPL---QR 90

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
           +      SP D     IV V  G  H+ A+ E   + W WGG          +S GQLG 
Sbjct: 91  LAPAPLPSPRD-----IVSVVSGEAHSLALDEAGTV-WAWGG----------NSSGQLGD 134

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G   D + P  V    +V A  V+ G  H+ AL
Sbjct: 135 GTTTDRVTPMQVAGLTDVVA--VAAGDFHSLAL 165


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 183/406 (45%), Gaps = 47/406 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +       A    ++ ++  G  ++L + E G ++  G N  G 
Sbjct: 11  WGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGT 70

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 71  LGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 130

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C S +  +Q A G   SV +T  G V +WG           
Sbjct: 131 KDDTGRPLRRDITIPQR--CASKLSVRQVAAGGTHSVVLTREGHVWTWG----------- 177

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S  TP  ++ LE  KV++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 178 QPWPPGDIKQIS--TPVRVQGLE--KVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTG 233

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  G +Y WG  E+G LG G        
Sbjct: 234 DTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMV 293

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++VQ    E        +IV +SCG  H+ A++ +G++ ++G  G HG     G+    
Sbjct: 294 PQKVQLLVEE--------NIVQISCGGTHSVALTRDGRMFSFG-RGDHGRL---GYGRKV 341

Query: 390 QLGHGNDVDYIHPTIVNF-----GENVKALQVSCGFNHTGALLEYV 430
             GH  +V    P   N      G +  +  V+CG  HT A++E++
Sbjct: 342 TTGHPMEVPINLPPATNLSGSGAGGHWCSKLVACGGRHTLAIVEWL 387



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 106/232 (45%), Gaps = 24/232 (10%)

Query: 40  AALWGNGDYGRLG--------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           A  WG  +YG+ G         G    R   +      K S++ +A GG H++ LT  G 
Sbjct: 113 AYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGH 172

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+      +GQ     +I     P+R+ GL+K V  I+ G  H+ A+  DG L+ WG N 
Sbjct: 173 VWT-----WGQPWPPGDIKQISTPVRVQGLEK-VRLIAVGAFHNLALLEDGILWAWGNNE 226

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG G    +  PI   V+ LS +     A G   S A+T  G V  WG G  GRLG 
Sbjct: 227 YGQLGTGDTQPRSQPI--AVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGF 284

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G + S        S+  P+ ++ L    +   + G  HS  +  +GR++ FG
Sbjct: 285 GDDKS--------SKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFG 328



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 105/285 (36%), Gaps = 79/285 (27%)

Query: 198 VLSWGAGGSGRLGHGQES-----------------SILGFLRST---------------- 224
           ++SWG+G  G+LG G                    S++   R++                
Sbjct: 8   IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67

Query: 225 -----------SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV------ 267
                      +E  P  +K L   K+  AA G  H   +D+ GR Y +G          
Sbjct: 68  RGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 127

Query: 268 DKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            +     G   RR   I +   S+    +V  GG H+ VLT  G ++TWG         G
Sbjct: 128 PERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQP----WPPG 183

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
            I  + +P RVQG             + L++ G  H  A+ E  IL W W          
Sbjct: 184 DIKQISTPVRVQG----------LEKVRLIAVGAFHNLALLEDGIL-WAW---------- 222

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           G++  GQLG G+      P  V    ++  + ++ G  H+ AL +
Sbjct: 223 GNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTD 267


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 151/325 (46%), Gaps = 42/325 (12%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L ++  G  +A G N  G+LG       S  P+R+ GLK EVV ++ G  HS A+  D
Sbjct: 372 HSLAVSADGSAWAWGHNSHGELGDGSTR-NSPAPVRVDGLK-EVVAVAAGSSHSLALLAD 429

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G +  WG N+ GQLG G +A+    +P +V  L G+     A G   S+A+   G V +W
Sbjct: 430 GTVLAWGDNTFGQLGDGTRASH--SVPAQVRGLRGVVA--VAAGSSHSLALLADGTVWTW 485

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   +G+LG G          +T  Y P  +K LEGV V +AA G  HS  +  +G  + 
Sbjct: 486 GYNLNGQLGDGT---------TTYRYEPVAVKGLEGV-VAVAAGGN-HSLAVRSDGTAWA 534

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +G+    K    +G    RP+ +     ++ V      +  + S G  + WG+N +G LG
Sbjct: 535 WGENV--KGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLG 592

Query: 322 IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTF 380
            GS      P RVQG             +V V+ G  H+ A+S EG +  W         
Sbjct: 593 DGSTTSRPMPMRVQG----------AGEVVAVAAGNGHSLALSPEGGVWAW--------- 633

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIV 405
              G ++ GQLG G     + PT V
Sbjct: 634 ---GQNARGQLGEGTLDRRLAPTRV 655



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 168/360 (46%), Gaps = 53/360 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A GG+H+L + + G V+A G N  GQLG          P+R+ GL   VV ++ G  HS
Sbjct: 15  IATGGSHSLSVHQDGTVWAVGGNSVGQLG-DGTTSLRRVPVRVLGLSG-VVTVAAGGGHS 72

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG NS+GQLG G    +  P+  +V  LSG+     A G   S+AV+  
Sbjct: 73  LAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPV--RVRGLSGVVA--VAAGGYHSLAVSAD 128

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK------IAAAGFLH 249
           G V +WG   SG+LG G                       E V+V+        AAG  H
Sbjct: 129 GTVWAWGNNSSGQLGDGS-----------------FDNRAEPVRVRGSSGVVAVAAGGAH 171

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           S  +  +G ++ +GD    ++  +   ++  P  + ++     V  G  H+  +++ G +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTV 231

Query: 310 YTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
           + WG N +G LGI  +  +L  P RV          ++  S+ + + G  H+ A+ +   
Sbjct: 232 WAWGDNSHGQLGIARTTPLLSIPGRVP---------EVRGSVAM-AAGDNHSLAVRDDGT 281

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           + W WG        +GH   GQLG+G  VD   P  V   E V A  V+ G NH+ A+ +
Sbjct: 282 V-WAWG-------SNGH---GQLGNGFMVDNSEPGRVPGLEGVGA--VAAGSNHSLAVRD 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 172/388 (44%), Gaps = 47/388 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G+LG GS ++R  PV         + A+A GG H+L ++  G V+A G N  GQ
Sbjct: 84  WGNNSSGQLGDGSFDNRAEPVRVRGLS--GVVAVAAGGYHSLAVSADGTVWAWGNNSSGQ 141

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +     EP+R+ G    V   +    HS A+  DG L+ WG N  GQLG   +  
Sbjct: 142 LG-DGSFDNRAEPVRVRGSSGVVAVAAG-GAHSLAVRSDGILWAWGDNLYGQLG--NRGE 197

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  ++G  T  A  G   S+AV+  G V +WG    G+LG  + + +L    
Sbjct: 198 FNSSEPVQVLRVTGGVTVSA--GANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSI-- 253

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML--FQEGNHARR 280
                 P  + E+ G      AAG  HS  + ++G V+ +G     ++   F   N    
Sbjct: 254 ------PGRVPEVRGSVAM--AAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNS--E 303

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     V  G  H+  +   G ++ WGSN  G  G G+   L +P RV      
Sbjct: 304 PGRVPGLEGVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTRV------ 357

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                  + +V V+    H+ A+S +G    W            GH+S G+LG G+  + 
Sbjct: 358 ----PGVSGVVGVAANVFHSLAVSADGSAWAW------------GHNSHGELGDGSTRNS 401

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALL 427
             P  V+  + V A  V+ G +H+ ALL
Sbjct: 402 PAPVRVDGLKEVVA--VAAGSSHSLALL 427



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 152/336 (45%), Gaps = 41/336 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G    G+LG G+   R  PV         +  +A GG H+L +   G V+A G N  GQL
Sbjct: 35  GGNSVGQLGDGTTSLRRVPVRVLGLS--GVVTVAAGGGHSLAVHSDGTVWAWGNNSSGQL 92

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G   +     EP+R+ GL   VV ++ G +HS A++ DG ++ WG NS+GQLG G    +
Sbjct: 93  G-DGSFDNRAEPVRVRGLSG-VVAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNR 150

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
             P+  +            A G   S+AV   G + +WG    G+LG+  E +       
Sbjct: 151 AEPVRVRGSS----GVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFN------- 199

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
            S    ++++   GV V   +AG  HS  +  +G V+ +GD +  ++       AR   L
Sbjct: 200 -SSEPVQVLRVTGGVTV---SAGANHSLAVSADGTVWAWGDNSHGQLGI-----ARTTPL 250

Query: 284 IS---KLPY---SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           +S   ++P    S  +  G  H+  +   G ++ WGSN +G LG G +     P RV G 
Sbjct: 251 LSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPG- 309

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
                       +  V+ G  H+ A+  +G +  WG
Sbjct: 310 ---------LEGVGAVAAGSNHSLAVRDDGTVWAWG 336



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 135/320 (42%), Gaps = 53/320 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G LG GS  +   PV     ++  + A+A G +H+L L   G V A G N FGQ
Sbjct: 385 WGHNSHGELGDGSTRNSPAPVRVDGLKE--VVAVAAGSSHSLALLADGTVLAWGDNTFGQ 442

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +S+ P ++ GL+  VV ++ G  HS A+  DG ++ WG N NGQLG G    
Sbjct: 443 LGDGTRASHSV-PAQVRGLRG-VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTY 500

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG---------- 212
           +  P+   V+ L G+     A G   S+AV   G   +WG    G+LG G          
Sbjct: 501 RYEPV--AVKGLEGVVA--VAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVE 556

Query: 213 -----------------------------QESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
                                          S  LG   +TS   P  ++     +V   
Sbjct: 557 VKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAG--EVVAV 614

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTC 301
           AAG  HS  +   G V+ +G  A  +    EG   RR  P+ +  L     V  GG  + 
Sbjct: 615 AAGNGHSLALSPEGGVWAWGQNA--RGQLGEGTLDRRLAPTRVQGLSGVVAVAAGGAFSL 672

Query: 302 VLTSGGELYTWGSNENGCLG 321
            +   G +++WG N  G LG
Sbjct: 673 AVRDDGSVWSWGDNAFGQLG 692



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 31/264 (11%)

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           G  +   +I+TG  HS ++  DG ++  G NS GQLG G  + + +P+  +V  LSG+ T
Sbjct: 7   GAARAPARIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPV--RVLGLSGVVT 64

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
              A G   S+AV   G V +WG   SG+LG G            +   P  ++ L GV 
Sbjct: 65  --VAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSFD---------NRAEPVRVRGLSGV- 112

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           V +AA G+ HS  +  +G V+ +G+ +  ++     ++   P  +        V  GG H
Sbjct: 113 VAVAAGGY-HSLAVSADGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGAH 171

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI--CTSIVLVSCGW 357
           +  + S G L+ WG N  G LG             +G F+ S   Q+   T  V VS G 
Sbjct: 172 SLAVRSDGILWAWGDNLYGQLGN------------RGEFNSSEPVQVLRVTGGVTVSAGA 219

Query: 358 KHTAAIS-EGKILTWGWGGSHGTF 380
            H+ A+S +G +  WG   SHG  
Sbjct: 220 NHSLAVSADGTVWAWG-DNSHGQL 242



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 10/169 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+L SR  PV   A  K    A       +L +   G  +A G N  GQ
Sbjct: 535 WGENVKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGL----SLAVGSDGFPWAWGNNSSGQ 590

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P+R+ G   EVV ++ G  HS A++ +G ++ WG+N+ GQLG G    
Sbjct: 591 LGDGSTTSRPM-PMRVQG-AGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDR 648

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           ++ P  T+V+ LSG+    A   F  S+AV   G V SWG    G+LG+
Sbjct: 649 RLAP--TRVQGLSGVVAVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 4/118 (3%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           F   WGN   G+LG GS  SR  P+         + A+A G  H+L L+  G V+A G N
Sbjct: 579 FPWAWGNNSSGQLGDGSTTSR--PMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQN 636

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             GQLG    +   L P R+ GL   V   +     S A+  DG ++ WG N+ GQLG
Sbjct: 637 ARGQLG-EGTLDRRLAPTRVQGLSGVVAVAAG-GAFSLAVRDDGSVWSWGDNAFGQLG 692


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 37/348 (10%)

Query: 92  VYATGLNDFGQLGISENIGY-SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
           V++ G N +G+LG  +     S E  RI  L+ KE++QI  G  H+  +T DG+++  G 
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 621

Query: 150 NSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           N NGQ G G   + + +  IP K++  SG     A  G E ++ V+  G+V + G    G
Sbjct: 622 NDNGQCGQGGTARVSHLSEIP-KMD--SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 678

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDEN-GRVYIFGD 264
           +LGHG          +TSE  P++I+ LE   V++ +  + H+  AC D N   +Y FG 
Sbjct: 679 QLGHGN---------TTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 729

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               ++   +    + P  +  L   +   V CG YHT V+T+ G+ + +G N+ G LGI
Sbjct: 730 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGI 789

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTF-- 380
            +++   +P +V+G        Q C  I    CG+ HT A+  G  L       +G    
Sbjct: 790 DTMENQLAPVQVRGGLER----QECLEI---RCGYYHTIALCSGAHLFAFGRNDYGQLGL 842

Query: 381 --SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             S    +S  QL       + +  +++  E    ++++CG  HT A+
Sbjct: 843 GRSNASSTSNLQLQQQR---FSNARLIDELEGKDIVRIACGCYHTIAV 887



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 167/396 (42%), Gaps = 37/396 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G   SR       A ++  +  +  G  HT+ LT  G V+  G ND GQ 
Sbjct: 568 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 627

Query: 104 GI--SENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G   +  + +  E P   SG  +       G  H+  ++ DG +   G N  GQLG G  
Sbjct: 628 GQGGTARVSHLSEIPKMDSGSSQ--AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 685

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG---KVLSWGAGGSGRLGHGQESSI 217
            ++   +P  +  L     +  +  +  +V     G    + ++G    G+LGH      
Sbjct: 686 TSE--SVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHND---- 739

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ ++ L   ++   A G  H+  +  +G+ + FG     ++      +
Sbjct: 740 -----SIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMEN 794

Query: 278 ARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP--E 332
              P  +   L   E  E+ CG YHT  L SG  L+ +G N+ G LG+G  +   +   +
Sbjct: 795 QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQ 854

Query: 333 RVQGPFSESP-VDQIC-TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
             Q  FS +  +D++    IV ++CG  HT A+S+  ++          F  + H   GQ
Sbjct: 855 LQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMY--------VFGRNNH---GQ 903

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           LG G+  + ++P  ++     +   V+ GF HT  L
Sbjct: 904 LGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVL 939



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  DYG+LG      R  P    A     + ++ACG  HT+ +T +G  +A G ND+GQ
Sbjct: 727 FGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQ 786

Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LGI + +   L P+++ G   ++E ++I  GY+H+ A+     L+ +G+N  GQLGLG+ 
Sbjct: 787 LGI-DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRS 845

Query: 161 AA----------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            A          +       ++ L G    + A G   ++AV+  G +  +G    G+LG
Sbjct: 846 NASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 905

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI------DENGR 258
            G          +T    P  I +  G +V + AAGF H+  +      D+N R
Sbjct: 906 TGD---------TTERVYPFPIDDFVGKRVALVAAGFYHTVVLTGGKEDDKNER 950



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 19/273 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI 105
           G+LG G+  S   P +  + E   ++ ++C   HT+   E G +   Y  G ND+GQLG 
Sbjct: 678 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGH 737

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +++I   +     +   +++V ++ G +H+  +T  G+ + +GKN  GQLG+     ++ 
Sbjct: 738 NDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLA 797

Query: 166 PIPT-----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSIL 218
           P+       + ECL      +   G+  ++A+  G  + ++G    G+LG G+   SS  
Sbjct: 798 PVQVRGGLERQECL------EIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 851

Query: 219 GFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                   ++  RLI ELEG  +   A G  H+  + +NG +Y+FG     ++   +   
Sbjct: 852 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTE 911

Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
              P  I          V  G YHT VLT G E
Sbjct: 912 RVYPFPIDDFVGKRVALVAAGFYHTVVLTGGKE 944



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 15/171 (8%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A  +G  DYG+LG+ ++E++  PV V    E+     + CG  HT+ L     ++A G N
Sbjct: 776 AFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRN 835

Query: 99  DFGQLGI-----SENIGYSLEPLRISGLK-------KEVVQISTGYHHSSAITVDGELYM 146
           D+GQLG+     S      L+  R S  +       K++V+I+ G +H+ A++ +G +Y+
Sbjct: 836 DYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYV 895

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +G+N++GQLG G    +V P P  ++   G      A GF  +V +TGG +
Sbjct: 896 FGRNNHGQLGTGDTTERVYPFP--IDDFVGKRVALVAAGFYHTVVLTGGKE 944


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 139/292 (47%), Gaps = 34/292 (11%)

Query: 44  GNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           G G  G LGLG+ +         +  PV+ +    H       GG H + LT  G VY+ 
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHP------GGRHAMALTAEGKVYSW 235

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G  D GQLG    +GY L+P  I  LK KEV +I+ G  HS A+  DG+++ WG  SNG 
Sbjct: 236 GCGDRGQLGHGNTLGY-LDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   A++  +P K+  L+G      A G   ++AV  G  V SWG GG+G LG+G E
Sbjct: 295 LGHGNNLAQL--LPKKIMSLNGKHIMAVACGECYTIAV-AGDDVWSWGLGGNGELGYGVE 351

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                     S Y P  I+ L    +   A G+  S  +  NG+V+ +G  + D+     
Sbjct: 352 MP--------SYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWG--SGDRFRLGL 401

Query: 275 GNHA--RRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           GN     +P  I    K    + VV   +H   +   G++Y WGS E G +G
Sbjct: 402 GNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVG 453



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+      P +    +   +  +ACG  H++ +   G +++ G    G 
Sbjct: 235 WGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N+   L P +I  L  K ++ ++ G  ++ A+  D +++ WG   NG+LG G + 
Sbjct: 295 LGHGNNLA-QLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGYGVEM 352

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                +PTK+E L        A G+  S AV+  GKV +WG+G   RLG G E  I+   
Sbjct: 353 PSYY-MPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIV--- 408

Query: 222 RSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                  PR I+ +L+G K+K   A   H+  IDENG+VYI+G + +
Sbjct: 409 ------KPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEI 449



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 43/292 (14%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           E+Y+WG   N  L   +K     P+ P K + L  +     A G++    V+  G + + 
Sbjct: 126 EVYVWGSKRNLLLAADEKN----PLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFAC 181

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
           G G  G LG G    +           PR I +L  V V   A   G  H+  +   G+V
Sbjct: 182 GKGHMGCLGLGNCDDV---------NVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKV 232

Query: 260 YIFGDRAVDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
           Y +G    D+     GN      P+LI +L   E  ++ CG  H+  + S G++++WG  
Sbjct: 233 YSWG--CGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDG 290

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
            NG LG G+      P+++     +         I+ V+CG  +T A++   + +WG GG
Sbjct: 291 SNGALGHGNNLAQLLPKKIMSLNGKH--------IMAVACGECYTIAVAGDDVWSWGLGG 342

Query: 376 SHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +            G+LG+G ++  Y  PT +          V+CG+  + A+
Sbjct: 343 N------------GELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAV 382



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 22/176 (12%)

Query: 255 ENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           E   VY++G +    +   E N     +  L+  L  S+ + CG     V++  G ++  
Sbjct: 123 EPSEVYVWGSKRNLLLAADEKNPLEPDKSKLLENLDPSD-IACGYDSLFVVSRNGGIFAC 181

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTW 371
           G    GCLG+G+ D ++ P ++           +  + V +  G +H  A++ EGK+ +W
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLP------VMVTTVAIHPGGRHAMALTAEGKVYSW 235

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           G G              GQLGHGN + Y+ PT+++  ++ +  +++CG  H+ A+L
Sbjct: 236 GCGDR------------GQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVL 279



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G  G LG G+  ++  P    +     + A+ACG  +T+ +     V++ GL   G+
Sbjct: 287 WGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDD-VWSWGLGGNGE 345

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +     P +I  L  K +  ++ GY  S A++ +G+++ WG     +LGLG + 
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNE- 404

Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            KVI  P +++  L G   K+       ++A+   G+V  WG+   G +G+ +++
Sbjct: 405 -KVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGNDEDA 458


>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
           musculus]
          Length = 1039

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 166/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 265 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 307

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 308 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 46/354 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 351

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           G + T+G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 352 GLLYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 42/254 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYH 239

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQV 416
           +A ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV
Sbjct: 240 SAFVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQV 286

Query: 417 SCGFNHTGALLEYV 430
           +CG  HT  L E V
Sbjct: 287 ACGGGHTVVLTEKV 300



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 41/199 (20%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E         + 
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPE--------KVK 128

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGE 409
           L +CG  HT       +++   GG +      G ++ GQLG G  +D D  H  IV F  
Sbjct: 129 LAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTP 176

Query: 410 NVKALQVSCGFNHTGALLE 428
                Q+S G N + AL E
Sbjct: 177 ADTIKQLSAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 445

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G   S + P +   FE+HS++ +A GG H++ LT  G V+  G   FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182

Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +     L P R+      ++  I+T   H++AIT  GELYMWG+           
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241

Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + +P+KV+ L+      +  GF  ++A+T  G++ +WGA  +  LG G   
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +   + P  +  LEGV++   A G  HS  + E G+V  +G     ++     
Sbjct: 299 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 351

Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
            + + P+ I  L   + V    GG  +  +T GGEL+ WG+ ++  LG+ G  ++  +P 
Sbjct: 352 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411

Query: 333 RVQ 335
            V 
Sbjct: 412 EVN 414



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 147/316 (46%), Gaps = 49/316 (15%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
           + IS G  HS  +T+DG+L++WGK   G+LG G++ +  +P       L+ +F + +   
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 156

Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            ALG   SVA+T  G V +WG GG G LGH            T E  PR + +    K+ 
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRRVDDSWDCKIS 207

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEV 293
             A    H+A I E+G +Y++G    D            EG     PS +  L      V
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CGG+ T  LT  G+L+ WG+N N  LG G  D L   E +  P  E         I  +
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEG------VRITQI 319

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H+ A++ EGK+L+WG GG             GQLG  +  +   PT +    + K
Sbjct: 320 ACGGYHSLALTEEGKVLSWGHGGH------------GQLGSSSLRNQKVPTEIEALADKK 367

Query: 413 ALQVSCGFNHTGALLE 428
            + ++ G + + A+ +
Sbjct: 368 IVFIASGGSSSAAITD 383


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    A     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++++  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 139/325 (42%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  I+ L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V        V +    
Sbjct: 259 IQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--------VVEKDRI 310

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           + + +C   HT+A     G +  WG
Sbjct: 311 VEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G             +V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNK-------VVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  +   + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTD 274



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDALSG--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  + + GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P R+   QG             I  V+CG+ HT  ++ EG++
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRIAALQG-----------IRIQRVACGYAHTLVLTDEGQV 278

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 279 YAWG------------ANSYGQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSAHTSA 323



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +V+I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357


>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
          Length = 376

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G   S + P +   FE+HS++ +A GG H++ LT  G V+  G   FG
Sbjct: 54  IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113

Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +     L P R+      ++  I+T   H++AIT  GELYMWG+           
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172

Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + +P+KV+ L+      +  GF  ++A+T  G++ +WGA  +  LG G   
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +   + P  +  LEGV++   A G  HS  + E G+V  +G     ++     
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282

Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
            + + P+ I  L   + V    GG  +  +T GGEL+ WG+ ++  LG+ G  ++  +P 
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 342

Query: 333 RVQ 335
            V 
Sbjct: 343 EVN 345



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 147/316 (46%), Gaps = 49/316 (15%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
           + IS G  HS  +T+DG+L++WGK   G+LG G++ +  +P       L+ +F + +   
Sbjct: 35  IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 87

Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            ALG   SVA+T  G V +WG GG G LGH            T E  PR + +    K+ 
Sbjct: 88  IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRRVDDSWDCKIS 138

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEV 293
             A    H+A I E+G +Y++G    D            EG     PS +  L      V
Sbjct: 139 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 198

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CGG+ T  LT  G+L+ WG+N N  LG G  D L   E +  P  E         I  +
Sbjct: 199 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEG------VRITQI 250

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H+ A++ EGK+L+WG GG             GQLG  +  +   PT +    + K
Sbjct: 251 ACGGYHSLALTEEGKVLSWGHGGH------------GQLGSSSLRNQKVPTEIEALADKK 298

Query: 413 ALQVSCGFNHTGALLE 428
            + ++ G + + A+ +
Sbjct: 299 IVFIASGGSSSAAITD 314


>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
          Length = 1001

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 166/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 7   LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 226

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 227 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 269

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 270 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 28  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 86  PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 148/313 (47%), Gaps = 37/313 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 99  TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 313

Query: 366 GKILTWGWGGSHG 378
           G + T+G  G HG
Sbjct: 314 GLLYTFG-DGRHG 325



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 42/254 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 43  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 94  CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 151

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYH 201

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQV 416
           +A ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV
Sbjct: 202 SAFVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQV 248

Query: 417 SCGFNHTGALLEYV 430
           +CG  HT  L E V
Sbjct: 249 ACGGGHTVVLTEKV 262



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V++ G N +GQLG + 
Sbjct: 76  GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
            I + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQA- 193

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            IP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 194 -IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LG G++     P  + +      +  +ACG  H+L LT  G V+A G N+ G
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G       ++ P R++G    K VV I+ G   S A+   GE+Y+WG N NGQLGLG 
Sbjct: 183 QVGSGSTANQAI-PRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +  P P +V  L GI  ++ A G+  ++ +T  G+V +WGA   G+LG G       
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
             +S   Y   ++ E + + ++IAA    H SA   + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 39/324 (12%)

Query: 64  VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           +CS  E   ++  AC     G   L+ T    ++  G N  G LG+ + +  +LEP R+ 
Sbjct: 36  LCSEEELQVIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGD-VQSTLEPRRLD 93

Query: 120 GL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            L  K++  +S G   H    T +GE++ WG N+ GQLG G     ++P       LS  
Sbjct: 94  SLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTN-LSNK 152

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +     
Sbjct: 153 QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQAIPRRVTGCLQ 203

Query: 238 VKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
            KV +  A G + S  + + G VY++G     ++      +   P  ++ L     + V 
Sbjct: 204 NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQICTSI 350
           CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+I   I
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDRI---I 311

Query: 351 VLVSCGWKHTAAISE--GKILTWG 372
            + +C   HT+A     G +  WG
Sbjct: 312 EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       LG ++ST E  PR +  L   K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------LGDVQSTLE--PRRLDSLSDKKIACLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
                G V+ +G  A  ++     NH   PS IS    ++   EV CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G GS      P RV G      V       V ++CG   + A+ + G+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVV-------VNIACGQMCSMAVVDTGE 225

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 226 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273

Query: 428 E 428
           +
Sbjct: 274 D 274



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LGLG   + + P   +++ LS    K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDVQSTLEP--RRLDSLSD--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    G+LG+G  +   G + S       +   L   +V   A G  HS  +  
Sbjct: 118 GEVFSWGHNAYGQLGNGTINH--GLVPS------HISTNLSNKQVTEVACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTDEGQV 278

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 279 YAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             +  +P  T   C   +F
Sbjct: 341 --SVTLPHLTHFSCTDDVF 357


>gi|340054997|emb|CCC49305.1| conserved hypothetical protein [Trypanosoma vivax Y486]
          Length = 622

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 41/363 (11%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           R+F   WG+G  G LG   L+ R  P  V  + F    +  ++ G +++  L+E G VY 
Sbjct: 172 RQFLYSWGSGTSGELGTQCLQDRDTPTLVQITPFGVR-VADVSLGASYSCALSEDGNVYT 230

Query: 95  TGLNDFGQLGISENIGYSLE----------PLRISGLKKE-VVQISTGYHHSSAITVDGE 143
            G  D+GQLG+S N   ++E          P RI   +++  V I+ GY ++ A+T D  
Sbjct: 231 FGNGDWGQLGLS-NPRNTVELSGDTVVATVPKRIPLFERQPAVHIAAGYAYAMALTADHH 289

Query: 144 LYMWGKNSNGQLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
           +Y WG N++GQ GLG  +     +++  PT V  L G    Q + G   ++A++  G + 
Sbjct: 290 VYFWGNNNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLALSNDGTLY 349

Query: 200 SWGAGGSGRLGHGQE-------SSILG----FLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           SWG      LG   E       S+I+G      R T    P++++     K+    AG  
Sbjct: 350 SWGLLECLGLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVVRVPTQHKLVRINAGQW 409

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTS 305
           HS  I   G ++ +G     ++         RP  +      E VV   CG +HT  LT 
Sbjct: 410 HSGAISVAGELFTWGVGFQWRLGHGSNEPGLRPQRVLGALVGEHVVDVACGSFHTVALTD 469

Query: 306 GGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIV-LVSCGWKHTAAI 363
            G++Y WG N +   G  +I DV      V+ P+  + ++ I + IV  +SCG +HT  +
Sbjct: 470 KGKVYCWGDNASRQCGANAIVDV------VKAPYHVANLEFIASGIVKAISCGRQHTVVV 523

Query: 364 SEG 366
            EG
Sbjct: 524 VEG 526



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 60/276 (21%)

Query: 42  LWGNGDYGRLGLGSL----ESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
            WGN ++G+ GLG L    E R    P + +  E   +  L+CG   TL L+  G +Y+ 
Sbjct: 292 FWGNNNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYSW 351

Query: 96  GLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQIST---------GYHHS 135
           GL +   LG ++ +   +    I G           L+ +VV++ T         G  HS
Sbjct: 352 GLLECLGLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVVRVPTQHKLVRINAGQWHS 411

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            AI+V GEL+ WG     +LG G     + P    +  L G      A G   +VA+T  
Sbjct: 412 GAISVAGELFTWGVGFQWRLGHGSNEPGLRP-QRVLGALVGEHVVDVACGSFHTVALTDK 470

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK---VKIAAAGFLHSAC 252
           GKV  WG   S + G    ++I+  +++     P  +  LE +    VK  + G  H+  
Sbjct: 471 GKVYCWGDNASRQCG---ANAIVDVVKA-----PYHVANLEFIASGIVKAISCGRQHTVV 522

Query: 253 IDE----------------------NGRVYIFGDRA 266
           + E                      +GRVY FGD A
Sbjct: 523 VVEGPHSDCQCTCCKLGPDGQPGGQHGRVYAFGDVA 558



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 28/160 (17%)

Query: 281 PSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI----------GSIDV 327
           P+L+   P+     +V  G  ++C L+  G +YT+G+ + G LG+          G   V
Sbjct: 197 PTLVQITPFGVRVADVSLGASYSCALSEDGNVYTFGNGDWGQLGLSNPRNTVELSGDTVV 256

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
              P+R+   F   P        V ++ G+ +  A++    + + WG ++      G S 
Sbjct: 257 ATVPKRIP-LFERQPA-------VHIAAGYAYAMALTADHHVYF-WGNNN-----HGQSG 302

Query: 388 GGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
            G L  G ++  +  PT+V   E  + +Q+SCG   T AL
Sbjct: 303 LGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLAL 342


>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Short=mRpgr; Flags: Precursor
          Length = 1001

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 166/347 (47%), Gaps = 44/347 (12%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 7   LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 226

Query: 325 IDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
             +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G        
Sbjct: 227 ELLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG-------- 269

Query: 383 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                 GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 270 ----QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 28  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 86  PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 148/313 (47%), Gaps = 37/313 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 99  TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
             +Y +G  + G LG+G+     S  ++     E   DQ    I  +SCG  HTA ++E 
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQ---KICHISCGENHTALMTEL 313

Query: 366 GKILTWGWGGSHG 378
           G + T+G  G HG
Sbjct: 314 GLLYTFG-DGRHG 325



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 42/254 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 43  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 94  CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 151

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  LT  G+L+ WG N  G +G+     +  P  V           +   I  +SCG+ H
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYH 201

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQV 416
           +A ++ +G++ T+G                G+LG  N++   H  P  V  G   + +QV
Sbjct: 202 SAFVTMDGELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQV 248

Query: 417 SCGFNHTGALLEYV 430
           +CG  HT  L E V
Sbjct: 249 ACGGGHTVVLTEKV 262



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 24/330 (7%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  + G+L +G  E  S   P   S  ++  +K ++CG  HTL +T+ G +Y+ G N++
Sbjct: 7   WGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEY 66

Query: 101 GQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LG S+     +   +  L  S    +V+Q + G   S  IT  GE++ WG+N  GQLG
Sbjct: 67  GELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLG 126

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            GK + +    P  ++ L+     Q   G    +A+T  G++ SWG    G+LG G   S
Sbjct: 127 RGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHS 186

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                      TP+ I  L G+ +   A+G  HS  +  +  V+ +G  +  ++   +  
Sbjct: 187 F--------HDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEY 238

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P+L   L   +   + CG  HT  LT  G ++++G+   G LG  S      P+RV
Sbjct: 239 DKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRV 298

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
                   ++ + + I  V+CG +HT A S
Sbjct: 299 --------MELMGSVISQVACGRRHTVAFS 320



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 133/294 (45%), Gaps = 47/294 (15%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG++++GQL +G      I  P +V  L  +  K+ + G + ++ VT  GK+ S G+   
Sbjct: 7   WGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEY 66

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LGH +  S     R+ S     L+  L  ++V  AA G   S  I   G V+ +G   
Sbjct: 67  GELGHSKPRS-----RAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRN- 120

Query: 267 VDKMLFQEGN----HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
            DK     G       R+P L+  L      ++ CG  H   LT  G L++WG N+ G L
Sbjct: 121 -DKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQL 179

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQIC---TSIVLVSCGWKHTAAISEGKILTW-----G 372
           G+GS    HS       F ++P   +C     I  ++ G  H+       ILTW     G
Sbjct: 180 GLGSS---HS-------FHDTPQQIVCLRGIPIAQIASGGNHSF------ILTWSRAVFG 223

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           W          G +S GQLG  ++ D  HPT+     N K + +SCG +HT AL
Sbjct: 224 W----------GKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVAL 267



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL     +  P +C +     +  ++CG  HT+ LT+ G V++ G   FGQ
Sbjct: 224 WGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQ 283

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
           LG +      L P R+  L   V+ Q++ G  H+ A +   G++Y +G   +GQLGLG  
Sbjct: 284 LGHNSTQNEIL-PKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDT 342

Query: 161 AAKVIPIP 168
           +A+  P P
Sbjct: 343 SARNSPFP 350



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)

Query: 272 FQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           F E      P  +S+L   +  E+ CG  HT ++T  G+LY+ GSNE G LG       H
Sbjct: 19  FSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELG-------H 71

Query: 330 SPERVQGPFSESPVDQICT----SIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
           S  R +   S   V+ + +     ++  + G + +  I+  G++ +WG            
Sbjct: 72  SKPRSRA-VSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG------------ 118

Query: 385 HSSGGQLGHG--NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +  GQLG G  +  +   P ++        +Q++CG NH  AL +
Sbjct: 119 RNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTD 164


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 182/407 (44%), Gaps = 60/407 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK--HSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG     +LG G  +++  P + S   +  + +  ++ G  H   +  TG ++  GL D 
Sbjct: 183 WGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDH 242

Query: 101 GQLGIS--ENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G+LG+   +++ Y   P R+  LK EV V ++ G + S+ I+ D +++ WG  S GQLG 
Sbjct: 243 GRLGLKSGKDVPY---PTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGH 299

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            +K+ +   +P  V  L  I   Q ALG+E   A++  G V +WG G  G+LGHG     
Sbjct: 300 VEKSDEW--LPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD---- 353

Query: 218 LGFLRSTSEYTP-RLIKELEGVKVKIA--------AAGFLHSACIDENGRVYIFGDRAVD 268
              L S S  TP +L+ ELE    ++A        A G   +  + + GR+  FG     
Sbjct: 354 ---LNSCS--TPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFG 408

Query: 269 KMLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +   E   A RP LI+     +     +  G  H   +TS G +YTWG    G +G  +
Sbjct: 409 ALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468

Query: 325 IDVLHSPERVQGPFS-ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
                +P   + P+  E P+D+   +    SCG  +T  +S+                  
Sbjct: 469 RRAYSNPPDCRKPYKLELPLDKRACA---TSCGGNYTVILSK------------------ 507

Query: 384 GHSSGGQLGHGNDVDYIHPTIV---NFGENVKALQVSCGFNHTGALL 427
               G  L  G+D   I P +    N    +KA  V CG  H+GA+L
Sbjct: 508 ---DGCVLVLGDDSTEIRPMLYDESNPASVMKASSVLCGRYHSGAIL 551



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 43/349 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPL-----RISGLKKEVVQISTGYHHSSAITVDGELYM 146
           ++A G +   QLG  +   Y  +P       ++ L   ++ +S G  H +AI   G+L+ 
Sbjct: 180 LFAWGCSHNYQLGTGQ---YQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFT 236

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG   +G+LGL  K+ K +P PT+V+ L          G   S  ++   KV +WG+G  
Sbjct: 237 WGLCDHGRLGL--KSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSK 294

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH ++S          E+ PR +  L  + +   A G+ H A +  +G VY +G+  
Sbjct: 295 GQLGHVEKS---------DEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGE 345

Query: 267 VDKMLFQEGNHARRPS--LISKLPYSEEV---------VCGGYHTCVLTSGGELYTWGSN 315
             ++   + N    P   L+     + EV          CG   T +LT  G L ++G +
Sbjct: 346 HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMS 405

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
           E G LG+G   +   P  +     +          V +S G +H AA+ S+G + TWG  
Sbjct: 406 EFGALGLGEKRLAARPHLITSRIMDK------RRFVHLSAGDEHCAAVTSKGNVYTWG-- 457

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
              G F   G  +  +  + N  D   P  +    + +A   SCG N+T
Sbjct: 458 --QGCFGAVGKPA--RRAYSNPPDCRKPYKLELPLDKRACATSCGGNYT 502


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4247 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4286

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4287 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GK+ SWG G  G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3195 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3239

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3240 --------RLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3283

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 148/327 (45%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G +++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3309 GLEGQ--------KITRVACGSSHSVA 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 271 LFQEGNHARRPSLISK 286
              +   A  P L +K
Sbjct: 747 RITKPEPAALPGLDTK 762



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+++ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3178

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3179 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3220

Query: 423  TGAL 426
            + AL
Sbjct: 3221 SLAL 3224



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 135/339 (39%), Gaps = 88/339 (25%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 383
             D    P ++     +S  D     +V V CG + + A+++ G + TWG G  H      
Sbjct: 4187 SDGCKVPMKI-----DSLTD---LGVVKVECGSQFSVALTKSGAVYTWGKGDYH------ 4232

Query: 384  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                  +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4233 ------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 138/329 (41%), Gaps = 59/329 (17%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    VVQI+        ++ +G +Y    NS+  LG           P  V+ 
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG-----------PQLVQS 490

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A++  G+V SWG G  GRLGHG    +           P+L
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKL 541

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 542 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 601

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSE 340
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P   E++Q     
Sbjct: 602 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD---- 657

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV V CG + + A++ +G++ TWG G +             +LGHG +   
Sbjct: 658 -------LDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ------------RLGHGTEEHV 698

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +P ++   +  K + V+ G  H  AL E
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTE 727



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A          
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA------- 4007

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4008 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G +
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------IAAGGAHSACITAAGDL 4117

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V   +  + + ++CG
Sbjct: 4118 FTWGKG------------RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2732 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2791

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 2792 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2850

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 2851 GH--------FSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2961

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2962 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3006

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3007 --------RLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3045



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 130/267 (48%), Gaps = 23/267 (8%)

Query: 62  PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           P++  +     +  LA    G H L L+  G V++ G  D G+LG  +   Y  EP  I+
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPTMIA 505

Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
                   K VV I+ G  +S+AITVDGELY WG+ + G+LG G    +  P+   V  L
Sbjct: 506 AFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 563

Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            G+     A G    Q++AVT  G+V SWG G  G+LG G          S    TP+L+
Sbjct: 564 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 614

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           ++L+ + +     G   S  + ++G+VY +G     ++      H R P L+  L   + 
Sbjct: 615 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 674

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNEN 317
            +V  G  H   LT  GE+++WGSN+ 
Sbjct: 675 VDVAVGSTHCLALTDDGEVHSWGSNDK 701



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G +YA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2770 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 2829

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2830 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKAKRIRDIACGSSHSAAITS 2887

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+L+K L G +V   A G     +  
Sbjct: 2888 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 2938

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2939 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2998

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2999 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3050

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3051 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3094



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 165/360 (45%), Gaps = 36/360 (10%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   ++K  V +++G  
Sbjct: 3797 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 3854

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GE+Y WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 3855 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 3912

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L+  L+G +V   A  +G   + 
Sbjct: 3913 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 3963

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 3964 CLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAV 4023

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG--- 366
            YTWG  +   LG GS D +  P +VQG   +         ++ ++ G  H    +E    
Sbjct: 4024 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--------KVIAIATGSLHCVCCTEDGRI 4075

Query: 367  KILTWG---WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
            K+  WG   W    G     G +  GQLG G       P +V   +  K  +V+CG  HT
Sbjct: 4076 KVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 152/336 (45%), Gaps = 30/336 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 2788 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 2846

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 2847 DGKLGHFSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 2905

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 2906 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2960

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 2961 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3014

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3015 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3074

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            QG   +         I  V+CG  H+ A +   + T
Sbjct: 3075 QGLEGQ--------KITRVACGSSHSVAWTTVDVTT 3102



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 2842 WGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 2959

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 2960 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3016

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + + G+VY +GD        Q+GN    
Sbjct: 3017 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3066

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3067 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3097



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 34/280 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G ++  G   +G+
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 3927

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 3928 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 3985

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +     P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 3986 -GSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4042

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF----------------- 262
                     PR ++ L+G KV   A G LH  C  E+GR+ +F                 
Sbjct: 4043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTW 4095

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
            GD    ++     N  +RP L++ L   +   V CG  HT
Sbjct: 4096 GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 54/329 (16%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C +     +  + C     L L+ +G VY                  +L P+ I  L
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 453

Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++ +GE++ WG    G+LG G      +  PT +   +G  
Sbjct: 454 SSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPTMIAAFNG-- 509

Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            KQA       A G   S A+T  G++ +WG G  GRLGHG          S  + TP L
Sbjct: 510 -KQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGS---------SEDQTTPML 559

Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           +  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL  
Sbjct: 560 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 619

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVD 344
            +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P   + +QG        
Sbjct: 620 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQG-------- 671

Query: 345 QICTSIVLVSCGWKHTAAIS-EGKILTWG 372
                +V V+ G  H  A++ +G++ +WG
Sbjct: 672 ---KKVVDVAVGSTHCLALTDDGEVHSWG 697



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 19/228 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + +AF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 482 WGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAAITVDGELYTWGR 540

Query: 98  NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            ++G+L  G SE+    +    + GLK   V   +G   + A+T +G+++ WG    G+L
Sbjct: 541 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 600

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG + 
Sbjct: 601 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 658

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+L+  L+G KV   A G  H   + ++G V+ +G
Sbjct: 659 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWG 697



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 4/164 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E +  P++ +A +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 538 WGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 597

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG   + G     L       ++V++  G   S A+T DG++Y WGK  N +LG G  
Sbjct: 598 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             + +  P  ++ L G      A+G    +A+T  G+V SWG+ 
Sbjct: 658 --EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN 699



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2724 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2781

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GK+ + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2833

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+
Sbjct: 2834 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYS 2893

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 2894 WGLGEYGRLGHGDNTTQLRPKLVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 2945

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 2946 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 2987

Query: 423  TGAL 426
            + AL
Sbjct: 2988 SLAL 2991



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
            G +Y WG N  GQLG G + AKV +P PT+                              
Sbjct: 3757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3815

Query: 171  --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                                +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 3816 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3875

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 3876 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 3926

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 3927 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 3986

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D   +P +         +D +    ++ V CG + + A+++ G + TWG G  H     
Sbjct: 3987 SDGCKTPMK---------IDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYH----- 4032

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4033 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4065



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 38/248 (15%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P +I    G +    V   A 
Sbjct: 471 LALSSNGEVFSWGCGDGGRLGHGD---------TTYLEEPTMIAAFNGKQAGKHVVHIAC 521

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P L++ L      +V CG     T 
Sbjct: 522 GSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +T  G++++WG  + G LG G  D   +P+ V+              IV V CG + + 
Sbjct: 582 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD--------LDIVKVCCGSQFSV 633

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++ +G++ TWG G +             +LGHG D     P +++  +  K + V+ G 
Sbjct: 634 ALTKDGQVYTWGKGDNQ------------RLGHGTDEHVRFPKLLDTLQGKKVVDVAVGS 681

Query: 421 NHTGALLE 428
            H  AL +
Sbjct: 682 THCLALTD 689



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 592 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 651

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ +   P  +  L+ K+VV ++ G  H  A+T DGE++ WG N   Q    L
Sbjct: 652 LGHGTDEHVRF---PKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTL 708

Query: 156 GLGKKAAKVIP 166
              KK  K +P
Sbjct: 709 FSNKKQPKALP 719



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +     + +  T R ++ + G +   A          
Sbjct: 3755 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTA------- 3807

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3808 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3865

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G++
Sbjct: 3866 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD--------IAAGGAHSACITASGEL 3917

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V+  +  + + V+CG
Sbjct: 3918 FTWGKG------------RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 3956



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 27/212 (12%)

Query: 224 TSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           ++   P LI  L   K VK+AA     H   +  NG V+ +G     ++   +  +   P
Sbjct: 442 STTLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEP 501

Query: 282 SLISKL------PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           ++I+         +   + CG  ++  +T  GELYTWG    G LG GS +   +P  V 
Sbjct: 502 TMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVT 561

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  VD  C S      G   T A++E G++ +WG G              G+LG G
Sbjct: 562 ALKGLKVVDVACGS------GDAQTLAVTENGQVWSWGDGDY------------GKLGRG 603

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  P +V   +++  ++V CG   + AL
Sbjct: 604 GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL 635



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
            WG+ D G+LG G+  +  RP + +A +   +  +ACG AHTL
Sbjct: 4095 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 29/277 (10%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLG 104
           G LGLG ++S   P      +  S K +AC     G H +  T  G ++  G N + QLG
Sbjct: 146 GCLGLGDIQSTIEP---RRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLG 202

Query: 105 ISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            +    + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A 
Sbjct: 203 -NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 261

Query: 163 KVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +  PIP +V  CL        A G   SVAV   G+V  WG  G+G+LG G         
Sbjct: 262 Q--PIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGS-------- 311

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
            S ++ TP  I  L+G+ V+  A G+ H+  + + G+VY++G  +  ++    GN + + 
Sbjct: 312 -SGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQS 368

Query: 281 ---PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
              P  + K    E   C   HT    T GG +Y WG
Sbjct: 369 YPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 141/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 100 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGCLGLGD-IQSTIE 158

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++   S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 159 PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN 218

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 219 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 268

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + +NG VY++G     ++      +   P  I+ L    
Sbjct: 269 TGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGIC 328

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V         D+I   
Sbjct: 329 VQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTPVA-----VEKDRI--- 380

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 381 IEIAACHSTHTSAAKTQGGHVYMWG 405



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 39/294 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A   +      +  T  
Sbjct: 132 TVNDEIFVLGTNCCGCLGLGDIQSTIEP--RRLDSLSG--KKIACFSYGSGPHVILATTE 187

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G++ +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 188 GEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 239

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 240 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVW 299

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTW 371
           G N NG LG+GS     +P R+      + +  IC  +  V+CG+ HT  ++ EG++  W
Sbjct: 300 GYNGNGQLGLGSSGNQSTPCRI------AALQGIC--VQRVACGYAHTLVLTDEGQVYVW 351

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 352 G------------ANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSA 393



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G ++ +G  A  ++     N
Sbjct: 150 LGDIQSTIE--PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTN 207

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 208 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 267

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A +  G++  WG+ G+            GQLG
Sbjct: 268 VTGCLQNKVV-------VNIACGQMCSVAVVDNGEVYVWGYNGN------------GQLG 308

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  +   + +   +V+CG+ HT  L +
Sbjct: 309 LGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTD 344



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VY  G N +G
Sbjct: 298 VWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYG 357

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 358 QLGTGNKSNQSY-PTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 410

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 411 --SVILPHLTSFSCTDDVF 427


>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
 gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Rattus norvegicus]
          Length = 531

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 128/270 (47%), Gaps = 19/270 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L GV V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            K    E   C   HT    T GG +Y WG
Sbjct: 282 EKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K+VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G ++K  + G 
Sbjct: 33  EAIYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKRIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLISKLPYSE--EVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  + + L   +  EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GEL+ WG N  G +G GS     +P +V        V       V ++CG   + A+
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKV-------VNIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V     V   Q+ CG+ H
Sbjct: 197 LDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG GS     RP V  +     +  +A GGAH+  +T  G +Y  G   +G+
Sbjct: 3701 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3760

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG S++    L+P  +  L+   VV I+  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 3761 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3818

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +PTK++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 3819 -GSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3875

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 3876 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3928

Query: 280  RPSLISKL--PYSEEVVCGGYHT 300
            RP L++ L       V CG  HT
Sbjct: 3929 RPRLVAALQGKKVNRVACGSAHT 3951



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3595 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3652

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3653 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3710

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3711 HGSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3765

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3766 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P+ I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3820 SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3879

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 3880 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 3919

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 3920 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2599 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2658

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2659 NGRLGLGLSSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2717

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2718 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2769 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2828

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2829 EGCNVPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2873

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2874 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2912



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   +V+   + +G  H
Sbjct: 2637 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRH 2696

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2697 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2754

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2755 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2805

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2806 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2865

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2866 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 2917

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2918 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2961



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 193 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKAISAFSGKQAGKHVVHIACGSTY 251

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 252 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 309

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 310 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 360

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 361 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 420

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 421 SWGSNDQ 427



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2709 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2769 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2826

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2827 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2883

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2884 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2932

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2933 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2964



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 148/328 (45%), Gaps = 30/328 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H   LT  G V++ G  D
Sbjct: 2655 GEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGD 2713

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G
Sbjct: 2714 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 2772

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 2773 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2827

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 2828 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2881

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 2882 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV 2941

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAA 362
            QG   +         I  V+CG  H+ A
Sbjct: 2942 QGLEGQ--------KITRVACGSSHSVA 2961



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 150/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+ +G VY    N             +L P  + GL
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDTLAPQLVQGL 179

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKAISAFSG 235

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 236 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 283

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 343

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 344 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 402

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 403 -------VAAGSTHCLALTEDSEVHSWG 423



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P   SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 208 WGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 266

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 267 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 325

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 326 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 383

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 384 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 129/298 (43%), Gaps = 37/298 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2591 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2648

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 2649 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATAL 2700

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2701 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2760

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 2761 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 2812

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             +WG     G F        G+LG G       P  +         Q+ CG   + AL
Sbjct: 2813 FSWG----DGDF--------GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 2858



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 135/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
            G +Y WG N  GQLG G + AKV +P                                  
Sbjct: 3590 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3648

Query: 168  -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                             PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3649 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3708

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3709 LGHGSRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3759

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3760 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 3820 SDGCKVPTK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 3865

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3866 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3898



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 264 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 323

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 324 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 382

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 383 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P+ I    G +    V   A 
Sbjct: 197 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKAISAFSGKQAGKHVVHIAC 247

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 248 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 307

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 308 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 356

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 357 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 404

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 405 AGSTHCLALTE 415



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 318 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 377

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 378 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 429



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3588 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3638

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3639 TADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3698

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG GS      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3699 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 3750

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 3751 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 3789


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +IS L   VV+   + +G  H
Sbjct: 1808 GGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRH 1867

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 1868 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1925

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+L+K L G +V   A G     +  
Sbjct: 1926 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLA 1976

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2036

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A++E G++ 
Sbjct: 2037 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKK--------IVHVAVGALHCLAVTETGQVF 2088

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2089 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+T +G++Y  G+ +
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 1829

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 1830 NGRLGLGLSSG-TIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 1888

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 1889 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939

Query: 270  MLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGS 1999

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2000 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2044

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ E
Sbjct: 2045 --------RLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTE 2083



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 166/357 (46%), Gaps = 43/357 (12%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   ++K  V +++G  
Sbjct: 2803 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 2860

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GELY WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 2861 HCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 2918

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L++ L+G +V   A  +G   + 
Sbjct: 2919 ASGELYTWGKGRYGRLGHGD---------SEDQLKPKLVEALQGHRVIDVACGSGDAQTL 2969

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
            YTWG  +   LG GS D +  P +VQG   +         ++ ++ G  H    +E G++
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--------KVIAIATGSLHCVCCTEDGEV 3081

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             TW            G +  GQLG G       P +V   +  K  +V+CG  HT A
Sbjct: 3082 YTW------------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G +Y  G   +G+
Sbjct: 2874 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGR 2933

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 2934 LGHGDSED-QLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 2991

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 2992 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3048

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 3049 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3101

Query: 280  RPSLISKLPYSE--EVVCGGYHT 300
            RP L++ L   +   V CG  HT
Sbjct: 3102 RPRLVAALQGKKINRVACGSAHT 3124



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 1880 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   VVQ++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG-- 1997

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 1998 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 2054

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + E G+V+ +GD        Q+GN    
Sbjct: 2055 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHG----QQGNGTTT 2104

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 2105 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2135



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 149/328 (45%), Gaps = 30/328 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    SA   + +K +A   GG H + LT  G V++ G  D
Sbjct: 1826 GEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 1884

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 1885 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 1943

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 1944 DNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGG--- 1998

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 1999 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 2052

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G+++ WG N++G  G G+  V   P  V
Sbjct: 2053 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLV 2112

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAA 362
            QG   +         I  V+CG  H+ A
Sbjct: 2113 QGLEGQ--------KITRVACGSSHSVA 2132



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 135/302 (44%), Gaps = 45/302 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 1762 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 1819

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  S  +  ++K     KV + + G  H+  +  
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 1873

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+WG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 1933

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILT 370
              E G LG G       P+ V+              +V V+CG +     A   EG + +
Sbjct: 1934 LGEYGRLGHGDNTTQLRPKLVKVLLGH--------RVVQVACGSRDAQTLALTDEGMVFS 1985

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTG 424
            WG     G F        G+LG G           N  +N++ L      Q+ CG   + 
Sbjct: 1986 WG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSL 2027

Query: 425  AL 426
            AL
Sbjct: 2028 AL 2029



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 129/289 (44%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +PT  E L+ +   Q   G +   AVT  GK+ + 
Sbjct: 2763 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 2820

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+          TP L++ ++ V ++  A  +G  H   +   G +
Sbjct: 2821 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 2871

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+     +   RP +I  L   E  ++  GG H+  +T+ GELYTWG    
Sbjct: 2872 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRY 2931

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P+ V+       +D  C S      G   T  +++  ++ W WG   
Sbjct: 2932 GRLGHGDSEDQLKPKLVEALQGHRVIDVACGS------GDAQTLCLTDDDMV-WSWG--- 2981

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 2982 -----DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3023



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +     + +  T R ++ + G +   A         +
Sbjct: 2761 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFA---------V 2811

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GEL
Sbjct: 2812 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 2871

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G++
Sbjct: 2872 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD--------IAAGGAHSACITASGEL 2923

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V   +  + + V+CG
Sbjct: 2924 YTWGKG------------RYGRLGHGDSEDQLKPKLVEALQGHRVIDVACG 2962



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 3032 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3091

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K++ +++ G  H+ A
Sbjct: 3092 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 3126


>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Sarcophilus harrisii]
          Length = 612

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 175/403 (43%), Gaps = 43/403 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E    P   + F +   LK L  GG H+  +T+ G ++  GLN  G
Sbjct: 194 WGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTDEGELFVCGLNKDG 253

Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+  +E++   +    ++G    V+Q+S G+  +  +T +G++   G NS GQLGL  
Sbjct: 254 QLGLGHTEDVLSFIPCTPLAGCP--VLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPP 311

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSI 217
              + + IP  +E L+      AA G   ++A T  G V  WG G   +GR     E ++
Sbjct: 312 GTKRQV-IPQVIELLNEKVVCIAA-GMRHALAATESGLVFQWGTGLASTGRR-TCPEKTL 368

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
             FL +     P  +  LE  KVK   AG  HSA + + G +Y++G     ++L      
Sbjct: 369 PPFLTAKE---PCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNKHGQLL-SPAAF 424

Query: 278 ARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG---------IGS 324
              P  I    +  E V     G  H    T  G+++TWG  + G LG          G 
Sbjct: 425 LPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADYGQLGTKVDGQERCTGD 484

Query: 325 IDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
            ++L S  R     +  P    C   +  ++CG +H  A+      +WGW          
Sbjct: 485 HELLLSCTRT---LATMPSSLPCLEGVTEMACGSEHNLAVVGSSCYSWGW---------- 531

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             +  G  G G +V+   P  V        L V CG  H+ A+
Sbjct: 532 --NEHGMCGDGTEVNVWVPKPVESPSLALCLLVGCGAGHSLAV 572



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 150/349 (42%), Gaps = 51/349 (14%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LGLG  E     + C+      +  ++CG   T+ LTE G V + G N FGQLG+   
Sbjct: 253 GQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPPG 312

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIP 166
               + P  I  L ++VV I+ G  H+ A T  G ++ WG    G    G++    K +P
Sbjct: 313 TKRQVIPQVIELLNEKVVCIAAGMRHALAATESGLVFQWG---TGLASTGRRTCPEKTLP 369

Query: 167 I------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                  P +V  L     K    G   S ++T  G++  WG+       HGQ  S   F
Sbjct: 370 PFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSN-----KHGQLLSPAAF 424

Query: 221 LRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA--------VDKM 270
           L      TP+ I+    +  KV +  +G+ H     E G+V+ +G RA        VD  
Sbjct: 425 L-----PTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWG-RADYGQLGTKVDGQ 478

Query: 271 LFQEGNH----------ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
               G+H          A  PS +  L    E+ CG  H   +  G   Y+WG NE+G  
Sbjct: 479 ERCTGDHELLLSCTRTLATMPSSLPCLEGVTEMACGSEHNLAVV-GSSCYSWGWNEHGMC 537

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
           G G+   +  P+ V     ESP   +C   +LV CG  H+ A+ +   L
Sbjct: 538 GDGTEVNVWVPKPV-----ESPSLALC---LLVGCGAGHSLAVGQAPAL 578



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 114/290 (39%), Gaps = 77/290 (26%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIP-------IPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           L  WG NS GQLGLG K   + P        P +++ L+G        G   S  VT  G
Sbjct: 191 LLSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTG--------GGGHSAVVTDEG 242

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTS------------------------------- 225
           ++   G    G+LG G    +L F+  T                                
Sbjct: 243 ELFVCGLNKDGQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCGSN 302

Query: 226 -------------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------R 265
                        +  P++I EL   KV   AAG  H+    E+G V+ +G        R
Sbjct: 303 SFGQLGLPPGTKRQVIPQVI-ELLNEKVVCIAAGMRHALAATESGLVFQWGTGLASTGRR 361

Query: 266 AVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              +        A+ P  ++ L  S  + VV G  H+  LT  GELY WGSN++G L + 
Sbjct: 362 TCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNKHGQL-LS 420

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
               L +P++++    ++        + +V  GW H  A +E GK+ TWG
Sbjct: 421 PAAFLPTPQKIEAHCFQN------EKVTMVWSGWTHLVARTETGKVFTWG 464



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 28/236 (11%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +LSWGA   G+LG G +  +L   R      P+ +K L G        G  HSA + + G
Sbjct: 191 LLSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTG--------GGGHSAVVTDEG 242

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWG 313
            +++ G     ++    G+     S I   P +     +V CG   T +LT  G++ + G
Sbjct: 243 ELFVCGLNKDGQLGL--GHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCG 300

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
           SN  G LG+        P   +       ++ +   +V ++ G +H  A +E G +  WG
Sbjct: 301 SNSFGQLGL--------PPGTKRQVIPQVIELLNEKVVCIAAGMRHALAATESGLVFQWG 352

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G      +  G  +  +      +    P  V   EN K   V  G  H+ +L +
Sbjct: 353 TG-----LASTGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTD 403



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 19/151 (12%)

Query: 42  LWGNGDYGRL-GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG+  +G+L    +     + +    F+   +  +  G  H +  TETG V+  G  D+
Sbjct: 409 VWGSNKHGQLLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADY 468

Query: 101 GQLG----------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           GQLG                +S     +  P  +  L+  V +++ G  H+ A+ V    
Sbjct: 469 GQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG-VTEMACGSEHNLAV-VGSSC 526

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           Y WG N +G  G G +    +P P +   L+
Sbjct: 527 YSWGWNEHGMCGDGTEVNVWVPKPVESPSLA 557


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P   ++     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 145/324 (44%), Gaps = 39/324 (12%)

Query: 64  VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           +CS  E  S++  AC     G   L+ T    ++  G N  G LGI + I  ++EP R++
Sbjct: 36  LCSEEELQSIRQ-ACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGD-IQSTIEPRRLN 93

Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P       LS  
Sbjct: 94  SLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 152

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LE 236
              + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +   L+
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 203

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
              V   A G + S  + + G VY++G     ++      +   P  ++ L     + V 
Sbjct: 204 NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQICTSI 350
           CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+I   I
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDRI---I 311

Query: 351 VLVSCGWKHTAAISE--GKILTWG 372
            + +C   HT+A     G +  WG
Sbjct: 312 EIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVDDEIFVLGTNCSGCLG-------IGDIQSTIE--PRRLNSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G GS      P RV G      V  I       +CG   + A+ + G+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI-------ACGQMCSMAVVDTGE 225

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 226 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273

Query: 428 E 428
           +
Sbjct: 274 D 274



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TVD E+++ G N +G LG+G   + + P   ++  L+G   K A+L +      V  T  
Sbjct: 62  TVDDEIFVLGTNCSGCLGIGDIQSTIEP--RRLNSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 274

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG++  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 275 EGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 322

Query: 425 A 425
           A
Sbjct: 323 A 323



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFCCTDDVF 357


>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Megachile rotundata]
          Length = 864

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 180/378 (47%), Gaps = 43/378 (11%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   + S F   K  + ++ CG  H+  + ++G ++  G ND+GQLG+      S +P
Sbjct: 92  SRFADNIASHFFIRKDPVVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHIS-KP 150

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
             +  LK E V  ++ G  H+   T   +++  G +  GQLG G  A   +   P+    
Sbjct: 151 SCVKVLKPEKVTHVACGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYD 210

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L+G    Q A G   S+A+   G V +WG+   G+LG    S ++   + T  + P  
Sbjct: 211 AGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVN--KPTKVHIPEP 268

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K++        +AG+ HSA + E+G VYI G+    K+        +      +LP   
Sbjct: 269 VKQI--------SAGYYHSAFLTESGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPA 320

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTS 349
             V CGG+HT VL   G +Y  GSN NG LG+G+ +  LH+P+ +     ++       +
Sbjct: 321 VHVACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQN------ET 374

Query: 350 IVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           I  +SCG  HTA ++E GK+ T G  G H           G+LG   + + +H   + F 
Sbjct: 375 ISRISCGESHTAIVTESGKLFTCG-DGRH-----------GKLGLEENENNVHE--LTFV 420

Query: 409 ENVKAL---QVSCGFNHT 423
           +  K L   +V+CG  HT
Sbjct: 421 QRYKELFVSKVACGGCHT 438



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 23/291 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLG      +P      +   +  +ACG AHTL  T    ++A G +  G
Sbjct: 130 VFGSNDWGQLGLGHRNHISKPSCVKVLKPEKVTHVACGRAHTLISTGAQKIFACGSDQEG 189

Query: 102 QLGI-SENIG-YSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           QLG  +  IG  S  P+ +  +GL   +++Q++ G HHS A+  DG ++ WG N  GQLG
Sbjct: 190 QLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLG 249

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           L    + ++  PTKV     +  KQ + G+  S  +T  G V   G   SG+LG      
Sbjct: 250 L-PDVSGLVNKPTKVHIPEPV--KQISAGYYHSAFLTESGLVYICGESESGKLGID---- 302

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG 275
            + F   +++ TP+ + +L    V +A  G  H+  + ENG +Y  G  +  ++ L    
Sbjct: 303 -VNF---STQITPKQM-QLPSPAVHVACGGH-HTVVLAENGNIYCTGSNSNGQLGLGTNV 356

Query: 276 NHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGI 322
                P L+S+     E +    CG  HT ++T  G+L+T G   +G LG+
Sbjct: 357 TELHTPKLLSRGMLQNETISRISCGESHTAIVTESGKLFTCGDGRHGKLGL 407



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 140/352 (39%), Gaps = 95/352 (26%)

Query: 81  AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           A    L E+G V+  G + F    I+ +     +P         VV I+ G  HS+ I  
Sbjct: 75  ADVSVLKESGAVFTVGRSRFAD-NIASHFFIRKDP---------VVSITCGDEHSAVICQ 124

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
            G L+++G N  GQLGLG +    I  P+ V+ L        A G   ++  TG  K+ +
Sbjct: 125 SGRLFVFGSNDWGQLGLGHRNH--ISKPSCVKVLKPEKVTHVACGRAHTLISTGAQKIFA 182

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            G+   G+LG G  +S +G     S  +P L+ +          AG   S  +       
Sbjct: 183 CGSDQEGQLGRG--TSAIG----DSSSSPVLVYD----------AGLAGSKIL------- 219

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                                          ++  G +H+  L S G ++ WGSN  G L
Sbjct: 220 -------------------------------QLAAGSHHSLALISDGGVFAWGSNLEGQL 248

Query: 321 GIGSID-VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
           G+  +  +++ P +V  P    PV QI       S G+ H+A ++E  ++          
Sbjct: 249 GLPDVSGLVNKPTKVHIP---EPVKQI-------SAGYYHSAFLTESGLVYIC------- 291

Query: 380 FSEDGHSSGGQLGHGNDVDY---IHPTIVNFGENVKALQVSCGFNHTGALLE 428
               G S  G+LG   DV++   I P  +       A+ V+CG +HT  L E
Sbjct: 292 ----GESESGKLGI--DVNFSTQITPKQMQLPS--PAVHVACGGHHTVVLAE 335


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 183/411 (44%), Gaps = 51/411 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVV-CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G G +G LG G   ++   +    A E H + A++ GG H+L LTE G V++ G    G+
Sbjct: 9   GGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68

Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   N     EP RI+       V +IS G  HS A+T DG+ Y +G    G+LG G +
Sbjct: 69  LG-HGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDE 127

Query: 161 AAKVIPIPTKV--------------ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
             +++P    +              E  +    +  A G+  S+ +T  G+V S+GAG  
Sbjct: 128 TDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LGHG     L          P +I+ L   ++   A G  ++  +D+ GRV+ FG   
Sbjct: 188 GALGHGDRDKRL---------RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDY 238

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            +   F EG  AR   L S L  +EE+     G  H  +LT  G+L  +G  +NG LG+G
Sbjct: 239 SEFPKFTEGQ-ARFVLLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLG 297

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSI-VLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
                 +P  V  P + +      TS+ + ++CG KH  A+ +      G G     F  
Sbjct: 298 DETNRLAPTAVTFPSNGT------TSVEIDIACGAKHGLALVD----VPGEGPRLYAF-- 345

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVN------FGENVKALQVSCGFNHTGALL 427
            G    GQL +G+  D   PT           +++    +S G  H+  LL
Sbjct: 346 -GSGDQGQLANGHRQDRASPTATTTSLPALLHQHIVPAAISAGKAHSLVLL 395



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
           +G G  G LG G  + R RP +  A     + ++ACG A+TL L + G V+  GL+  +F
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEF 241

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +        + L P  + GL +E+ ++  G  H   +T +G+L  +G   NG+LGLG +
Sbjct: 242 PKF-TEGQARFVLLPSAL-GLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDE 299

Query: 161 AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTG----GGKVLSWGAGGSGRLGHGQ 213
             ++   PT V   S   T      A G +  +A+      G ++ ++G+G  G+L +G 
Sbjct: 300 TNRL--APTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGH 357

Query: 214 ESS 216
              
Sbjct: 358 RQD 360



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 144/355 (40%), Gaps = 57/355 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
           +GNG +GRLG G+ E+ + P   + F+  + +  ++ G  H+L LT+ G  Y+ G   FG
Sbjct: 61  FGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFG 120

Query: 102 QLGISENI-----------GYSLEPL---RISGLKKEVV--QISTGYHHSSAITVDGELY 145
           +LG  +             G+   P    R+   + + V   ++ GY HS  +T DG +Y
Sbjct: 121 RLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVY 180

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +G    G LG G +  ++   PT +E L+       A G   ++ +   G+V  +G   
Sbjct: 181 SFGAGVMGALGHGDRDKRL--RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGL-- 236

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG 263
                    S    F    + +   L+    G+  +I    AG  H   +   G++  FG
Sbjct: 237 -------DYSEFPKFTEGQARFV--LLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFG 287

Query: 264 DRAVDKMLFQEGNHARRPSLIS-----KLPYSEEVVCGGYHTCVLTS----GGELYTWGS 314
                ++   +  +   P+ ++           ++ CG  H   L      G  LY +GS
Sbjct: 288 LGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGS 347

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH--TAAISEGK 367
            + G L  G     H  +R       SP     T+  L +   +H   AAIS GK
Sbjct: 348 GDQGQLANG-----HRQDRA------SPT---ATTTSLPALLHQHIVPAAISAGK 388



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 36/242 (14%)

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G VLS G G  G LG G   + L  L      TP  I+ LE  +V   +AG  HS  + E
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVL------TP--IRALEAHRVVAVSAGGHHSLVLTE 54

Query: 256 NGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            GRV+ FG+    ++    GN       RR +         ++  G  H+  LT  G+ Y
Sbjct: 55  EGRVFSFGNGLHGRL--GHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAY 112

Query: 311 TWGSNENGCLGIGS-IDVLHSPE-RVQGPFSESPV------DQICTSIVLVSCGWKHTAA 362
           ++G    G LG G   D L   E  ++G  +  PV      ++    I  V+ G+ H+  
Sbjct: 113 SFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLL 172

Query: 363 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
           + ++G++ ++G G              G LGHG+    + PT++    + + + ++CG  
Sbjct: 173 LTTDGRVYSFGAG------------VMGALGHGDRDKRLRPTMIEALADRRIVSMACGSA 220

Query: 422 HT 423
           +T
Sbjct: 221 NT 222


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 176/370 (47%), Gaps = 39/370 (10%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI      G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 18  SKFWFKNDIPAFLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSTVNKPTCVKALK 75

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  TE G VYA+G N+ GQLG+ + +   S   +     ++++ Q+
Sbjct: 76  PEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL 135

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DGEL+MWG NS GQ+GL  K    + +P +V    G      + G+  
Sbjct: 136 SAGSNTSAALTEDGELFMWGDNSEGQIGL--KNITNVCVPQQVTV--GKPISWISCGYYH 191

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAG 246
           S  VT  G++ ++G   SG+LG  ++  +            R+ + + G+  K+   A G
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLV----------NHRMPQSVPGIPEKVVQVACG 241

Query: 247 FLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
             H+  + E   VY      FG   +   LF+       P +I  +   +   + CG  H
Sbjct: 242 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE----TPVPKVIEHIKDLKISSIFCGENH 296

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV-LVSCGWK 358
           T ++T  G +YT+G   +G LG+G        E     F+ +        IV LV+CG  
Sbjct: 297 TALITDLGLMYTFGDGRHGKLGLGL-------ENFTNQFTPTLCSNFLRFIVQLVACGGC 349

Query: 359 HTAAISEGKI 368
           HT   +  ++
Sbjct: 350 HTLVFATPRL 359



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 157/332 (47%), Gaps = 39/332 (11%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          +S G  H++ +T + +LYM+G N+ GQLGLG 
Sbjct: 7   FGKTKFAENI-----PSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGS 61

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K+   +  PT V+ L     K AA G   ++  T GGKV + G    G+LG G       
Sbjct: 62  KS--TVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNS 119

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   + R IK+L        +AG   SA + E+G ++++GD +  ++  +   +  
Sbjct: 120 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVC 171

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHS-PERVQGP 337
            P  ++       + CG YH+  +T+ GELYT+G  E+G LG+   + V H  P+ V G 
Sbjct: 172 VPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG- 230

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                   I   +V V+CG  HT  ++E  + T+G G              GQLG G  +
Sbjct: 231 --------IPEKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFL 270

Query: 398 -DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +   P ++   +++K   + CG NHT  + +
Sbjct: 271 FETPVPKVIEHIKDLKISSIFCGENHTALITD 302



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 162/365 (44%), Gaps = 60/365 (16%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      + +P  +  LK E V+ +  G +H
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVN-KPTCVKALKPEKVKFAACGRNH 88

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G++Y  G N+ GQLGLG    +          L   FT     KQ + G   S
Sbjct: 89  TLVSTEGGKVYASGGNNEGQLGLGDTDER------NSFHLISFFTSQRKIKQLSAGSNTS 142

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G    +++           P+ +    G  +   + G+ H
Sbjct: 143 AALTEDGELFMWGDNSEGQIGLKNITNVC---------VPQQV--TVGKPISWISCGYYH 191

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
           SA +   G +Y FG+    K+   +    NH R P  +  +P    +V CGG HT VLT 
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACGGGHTVVLTE 250

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-----SIVLVSCGWKHT 360
              +YT+G  + G LG+G+               E+PV ++        I  + CG  HT
Sbjct: 251 KA-VYTFGLGQFGQLGLGTF------------LFETPVPKVIEHIKDLKISSIFCGENHT 297

Query: 361 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSC 418
           A I++ G + T+G  G HG            LG  N  +   PT+  NF   +  L V+C
Sbjct: 298 ALITDLGLMYTFG-DGRHGKLG---------LGLENFTNQFTPTLCSNFLRFIVQL-VAC 346

Query: 419 GFNHT 423
           G  HT
Sbjct: 347 GGCHT 351


>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 175/402 (43%), Gaps = 47/402 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
           WG G  G+LG   LE    P +       S   +  LACGGAH L LT  G V   G   
Sbjct: 25  WGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGT 84

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG  + +  SL+P  +  L+  V+  +S G+ HS  ++  G L+  G  S GQLG G
Sbjct: 85  SGQLGHGDMVS-SLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHG 143

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---TG--GGKVLSWGAGGSGRLGHGQ 213
              +   P+  KV         Q A G   S+ +   TG  G +V  +G+G  G+LG   
Sbjct: 144 DCKSHCSPV--KVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGSGKRGQLGVSM 201

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +++     RS S   P+    LEGV++    A   HSA +  NG +Y +G        F 
Sbjct: 202 DNT-----RSIS--VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG------FG 248

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSP 331
             +    P  +       +V  G  H  VLT GGE++  G N +G LG       V H  
Sbjct: 249 STSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLS 308

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL---TWGWGGSHGTFSEDGHSSG 388
           E  +    E        ++V ++ G +H+A ++ G IL   TWGWG              
Sbjct: 309 EESREENLEKVQGLDGLNVVQIAAGAEHSALVT-GNILVIKTWGWG------------EH 355

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKA----LQVSCGFNHTGAL 426
           GQLG GN  D I P  V  G  +      ++V CG   T A+
Sbjct: 356 GQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 397



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 24/241 (9%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSW 201
           E++ WG  ++GQLG  +   + +P    +   S        A G    +A+T  GKV++W
Sbjct: 21  EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 80

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G SG+LGHG   S L          P+ +K LE   +   +AG+ HS  + + G ++ 
Sbjct: 81  GRGTSGQLGHGDMVSSL---------QPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFT 131

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVL-----TSGGELYTWGS 314
            GD +  ++   +      P  +S     + +++ CG  H+ VL      SG ++Y +GS
Sbjct: 132 CGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGS 191

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGW 373
            + G LG+ S+D   S    Q       V+     I+ +     H+AA+S  G + TWG 
Sbjct: 192 GKRGQLGV-SMDNTRSISVPQATVGLEGVE-----IISIDANGDHSAALSANGHLYTWGR 245

Query: 374 G 374
           G
Sbjct: 246 G 246



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 22/149 (14%)

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P   S  P S  + CGG H   LT+ G++ TWG   +G LG G +     P+ V+    E
Sbjct: 50  PRFSSAGPISL-LACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVK--LLE 106

Query: 341 SPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
           S V      +  VS GW H+  +S+ G + T G G            S GQLGHG+   +
Sbjct: 107 SFV------MTHVSAGWSHSGFVSDTGCLFTCGDG------------SFGQLGHGDCKSH 148

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
             P  V++ ++    Q++CG  H+  LL+
Sbjct: 149 CSPVKVSYFDSKHVDQIACGMRHSLVLLK 177


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 166/348 (47%), Gaps = 37/348 (10%)

Query: 92  VYATGLNDFGQLGISENIGY-SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
           V++ G N +G+LG  +     S E  RI  L+ KE++QI  G  H+  +T DG+++  G 
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 432

Query: 150 NSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           N NGQ G G   + + +  IP K++  SG     A  G E ++ V+  G+V + G    G
Sbjct: 433 NDNGQCGQGGTARVSHLSEIP-KMD--SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 489

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDEN-GRVYIFGD 264
           +LGHG          +TSE  P++I+ LE   V++ +  + H+  AC D N   +Y FG 
Sbjct: 490 QLGHGN---------TTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 540

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               ++   +    + P  +  L   +   V CG YHT V+T  G+ + +G N+ G LGI
Sbjct: 541 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGI 600

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTF-- 380
            +++   +P +V+G        Q C  I    CG+ HT A+  G  L       +G    
Sbjct: 601 DTMENQLAPVQVRGGLER----QECLEI---RCGYYHTIALCSGAHLFAFGRNDYGQLGL 653

Query: 381 --SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             S    +S  QL       + +  +++  E    ++++CG  HT A+
Sbjct: 654 GRSNASSTSNLQLQQQR---FSNARLIDELEGKDIVRIACGCYHTIAV 698



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 167/396 (42%), Gaps = 37/396 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G   SR       A ++  +  +  G  HT+ LT  G V+  G ND GQ 
Sbjct: 379 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 438

Query: 104 GI--SENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G   +  + +  E P   SG  +       G  H+  ++ DG +   G N  GQLG G  
Sbjct: 439 GQGGTARVSHLSEIPKMDSGSSQ--AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 496

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG---KVLSWGAGGSGRLGHGQESSI 217
            ++   +P  +  L     +  +  +  +V     G    + ++G    G+LGH      
Sbjct: 497 TSE--SVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHND---- 550

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ ++ L   ++   A G  H+  +  +G+ + FG     ++      +
Sbjct: 551 -----SIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMEN 605

Query: 278 ARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP--E 332
              P  +   L   E  E+ CG YHT  L SG  L+ +G N+ G LG+G  +   +   +
Sbjct: 606 QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQ 665

Query: 333 RVQGPFSESP-VDQIC-TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
             Q  FS +  +D++    IV ++CG  HT A+S+  ++          F  + H   GQ
Sbjct: 666 LQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMY--------VFGRNNH---GQ 714

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           LG G+  + ++P  ++     +   V+ GF HT  L
Sbjct: 715 LGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 19/273 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI 105
           G+LG G+  S   P +  + E   ++ ++C   HT+   E G +   Y  G ND+GQLG 
Sbjct: 489 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGH 548

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +++I   +     +   +++V ++ G +H+  +TV G+ + +GKN  GQLG+     ++ 
Sbjct: 549 NDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLA 608

Query: 166 PIPT-----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSIL 218
           P+       + ECL      +   G+  ++A+  G  + ++G    G+LG G+   SS  
Sbjct: 609 PVQVRGGLERQECL------EIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 662

Query: 219 GFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                   ++  RLI ELEG  +   A G  H+  + +NG +Y+FG     ++   +   
Sbjct: 663 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTE 722

Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
              P  I          V  G YHT VLT G E
Sbjct: 723 RVYPFPIDDFVGKRIALVAAGFYHTVVLTGGKE 755



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 22/223 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  DYG+LG      R  P    A     + ++ACG  HT+ +T +G  +A G ND+GQ
Sbjct: 538 FGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQ 597

Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LGI + +   L P+++ G   ++E ++I  GY+H+ A+     L+ +G+N  GQLGLG+ 
Sbjct: 598 LGI-DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRS 656

Query: 161 AA----------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            A          +       ++ L G    + A G   ++AV+  G +  +G    G+LG
Sbjct: 657 NASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 716

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G          +T    P  I +  G ++ + AAGF H+  +
Sbjct: 717 TGD---------TTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 15/171 (8%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A  +G  DYG+LG+ ++E++  PV V    E+     + CG  HT+ L     ++A G N
Sbjct: 587 AFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRN 646

Query: 99  DFGQLGI-----SENIGYSLEPLRISGLK-------KEVVQISTGYHHSSAITVDGELYM 146
           D+GQLG+     S      L+  R S  +       K++V+I+ G +H+ A++ +G +Y+
Sbjct: 647 DYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYV 706

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +G+N++GQLG G    +V P P  ++   G      A GF  +V +TGG +
Sbjct: 707 FGRNNHGQLGTGDTTERVYPFP--IDDFVGKRIALVAAGFYHTVVLTGGKE 755


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 169/370 (45%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDH 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG   +   +  PL I  L+  V +QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLG---HDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 127 D-KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P  V   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--- 296

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
                ++ + ++I  V+CG +HT A+  S G++  +G G            S GQLG  +
Sbjct: 297 -----MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRS 339

Query: 396 DVDYIHPTIV 405
               + P +V
Sbjct: 340 TKSLMLPQVV 349



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+ +LG   L ++ RP++    + + +  ++CG  H+L L++ G V + G ND GQL
Sbjct: 65  GSNDHSQLG-HDLPTK-RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   K 
Sbjct: 123 GHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++  G V  WG    G+LG   E       
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  S   L  P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 44/287 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   +   + G  HS  + + G+V  +
Sbjct: 66  SNDHSQLGHDLPTK-----------RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIMQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             G LG+ S  D+ H   P R+           +   +  ++CG  H+  IS+   + +G
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRL--------TTLLGIPLAAIACGGNHSFLISKSGAV-FG 221

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           W          G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 222 W----------GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 258



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 26/157 (16%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           E      PS I   P +  E+V CG  HT  LT+ G++Y  GSN++  LG      L + 
Sbjct: 24  EDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLGHD----LPTK 79

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             +  P  +  V      I+ +SCG +H+ A+S+ G++L+WG             +  GQ
Sbjct: 80  RPLLIPELQDYV------IIQISCGSRHSLALSDWGQVLSWG------------DNDCGQ 121

Query: 391 LGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           LGH  D + +  P +V    +   +Q++CG NH+ AL
Sbjct: 122 LGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLAL 158


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGTH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG +H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PAQSNKPLSIGALKNL--GVVYISCGDEH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G   S            GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFGDNCS------------GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 149/309 (48%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGTHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  I  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNCSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 14/230 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L G+        P  +  L  +     + G E +  +T  GKV ++G   SG+LG+  
Sbjct: 213 LALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSP 272

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENI-GYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL I  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++      + ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI------TTLNGI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGTHSFAL 196


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 155/353 (43%), Gaps = 33/353 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN D G+LG G+   R  P          + A++ G  H + +   G     G N F Q
Sbjct: 401 WGNNDSGQLGDGTY-IRHTPTPVPGLT--GVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQ 457

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P+++ GL  E   ++ G  HS A+  DG ++ WG NS   LGLG +  
Sbjct: 458 LGRPPESVNRGGPVQVPGLT-EASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPG 516

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P P +V  L+G+  +  A G   S+AV   G V++WG G  G+LG  + +SI     
Sbjct: 517 AS-PTPVQVPKLAGV--RSLAAGENSSLAVLANGTVMAWGYGLFGQLGS-ESASIF---- 568

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L G+     A G  +S  + E+G V+ +G  A  ++     +   RP 
Sbjct: 569 ----QIPEPIFGLSGITA--VAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPG 622

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ L     +  G  H   L + G ++ WGSN  G LG G+     +P +VQG      
Sbjct: 623 QVAGLTQVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRSTPVQVQG------ 676

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQL 391
                T ++ V+ G  H+ A+ E   + W WG    G  G  +     S GQ+
Sbjct: 677 ----LTGVIAVAAGEYHSLALREDGTV-WSWGNNNEGQLGDVTASSRQSPGQV 724



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 140/301 (46%), Gaps = 27/301 (8%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++A++ G  H L L   G V+A G N  GQLG       S  P+++ GL  EV+ +S   
Sbjct: 177 VRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRS-TPVQVVGLT-EVIAVSAAG 234

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + S A+  DG ++ WG N +GQLG G    ++ P    V+ L  +     A G   S+AV
Sbjct: 235 YSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTP----VQVLDLVRVTGLAAGRGHSLAV 290

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V +WGA   G+LG G      GF   + E  PR +   +   V   AA    S  
Sbjct: 291 LADGTVRAWGANIYGQLGDG------GF---SLEGNPRPVAVSKLTDVVSVAASTSLSFA 341

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G V  +G      +  ++ +++R PS +  L     V  GGY+   L   G + +W
Sbjct: 342 VHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVFGLTDVATVSVGGYYAVALMGDGTVRSW 401

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
           G+N++G LG G+  + H+P  V G           T +  VS G  H  A+ S+G    W
Sbjct: 402 GNNDSGQLGDGTY-IRHTPTPVPG----------LTGVTAVSAGEDHVVAVLSDGSPRVW 450

Query: 372 G 372
           G
Sbjct: 451 G 451



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 160/337 (47%), Gaps = 35/337 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ + G+LG G++E R  PV     +   +  LA G  H+L +   G V A G N +GQ
Sbjct: 249 WGDNESGQLGDGTMEGRLTPV--QVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQ 306

Query: 103 LGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG   + G+SLE    P+ +S L  +VV ++     S A+  DG +  WG N +G LG+ 
Sbjct: 307 LG---DGGFSLEGNPRPVAVSKL-TDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVE 362

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           +++     +P+KV  L+ + T   ++G   +VA+ G G V SWG   SG+LG G      
Sbjct: 363 QRSNSR--VPSKVFGLTDVAT--VSVGGYYAVALMGDGTVRSWGNNDSGQLGDGT----- 413

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNH 277
            ++R    +TP  +  L GV     +AG  H   +  +G   ++GD    ++    E  +
Sbjct: 414 -YIR----HTPTPVPGLTGVTA--VSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVN 466

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +  L  +  V  G  H+  L + G ++ WG N    LG+G  +   SP  VQ P
Sbjct: 467 RGGPVQVPGLTEASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGD-EPGASPTPVQVP 525

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
                  ++     L +      A ++ G ++ WG+G
Sbjct: 526 -------KLAGVRSLAAGENSSLAVLANGTVMAWGYG 555



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 159/375 (42%), Gaps = 59/375 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +  LGLG  E    P      +   +++LA G   +L +   G V A G   FGQ
Sbjct: 501 WGDNSFSALGLGD-EPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQ 559

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG SE+      P  I GL   +  ++ G+ +S A+  DG ++ WG N++GQLG G    
Sbjct: 560 LG-SESASIFQIPEPIFGLSG-ITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDE 617

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  L+ +     A G   ++A+   G V +WG+   G LG G +        
Sbjct: 618 R--PRPGQVAGLTQV--TAIAAGASHALALRADGTVWAWGSNALGTLGDGTQ-------- 665

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS  TP  ++ L GV     AAG  HS  + E+G V+ +G+    ++     +  + P 
Sbjct: 666 -TSRSTPVQVQGLTGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPG 722

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI---------GSIDVLHSPER 333
            +  L   + +  G  H      GG L  +G N +G LG+         G I  L +P  
Sbjct: 723 QVPGLAGVQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIASLRNPRG 782

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
                              ++ G  HT A+ ++G +  W WG           ++ GQLG
Sbjct: 783 -------------------IAAGIAHTLAVAADGTV--WAWGA----------NATGQLG 811

Query: 393 HGNDVDYIHPTIVNF 407
           +G   +   P  V  
Sbjct: 812 NGEAANSPQPITVKL 826



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 156/359 (43%), Gaps = 57/359 (15%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            A+A G  H+L +   G V   GL+              + P  + GL  +V  +S G  
Sbjct: 136 PAVAAGRYHSLMVRPDGTVLEWGLSYL-------RFDGGVRP--VPGLT-DVRAVSAGNE 185

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H+ A+  DG ++ WG N  GQLG G K ++  P+  +V  L+ +    AA G+  S+A+ 
Sbjct: 186 HALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPV--QVVGLTEVIAVSAA-GYS-SLALR 241

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G V +WG   SG+LG G     L         TP  ++ L+ V+V   AAG  HS  +
Sbjct: 242 KDGTVWAWGDNESGQLGDGTMEGRL---------TP--VQVLDLVRVTGLAAGRGHSLAV 290

Query: 254 DENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
             +G V  +G     ++       EGN   RP  +SKL     V      +  + S G +
Sbjct: 291 LADGTVRAWGANIYGQLGDGGFSLEGNP--RPVAVSKLTDVVSVAASTSLSFAVHSDGTV 348

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC-GWKHTAAISEGKI 368
            +WGSN +G LG+        P +V G           T +  VS  G+   A + +G +
Sbjct: 349 SSWGSNVDGALGVEQRSNSRVPSKVFG----------LTDVATVSVGGYYAVALMGDGTV 398

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            +W            G++  GQLG G  + +  PT V     V A  VS G +H  A+L
Sbjct: 399 RSW------------GNNDSGQLGDGTYIRHT-PTPVPGLTGVTA--VSAGEDHVVAVL 442


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 182/416 (43%), Gaps = 66/416 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E +    V  A E  +++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT+ GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V     E         I+ VSCG  H+ A++ +G+I ++G  G H           G
Sbjct: 293 PQKVNLLPGE--------DIIQVSCGGTHSVALTRDGRIFSFG-RGDH-----------G 332

Query: 390 QLGHGNDVD---------YIHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 429
           +LG+G  V          +I P    F    +       A  V+CG  HT A++E+
Sbjct: 333 RLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEW 388



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 78/282 (27%)

Query: 198 VLSWGAGGSGRLGHGQES-----------------SILGFLRST---------------- 224
           V++WG+G  G+LG G +                  S++G  R++                
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 225 -----------SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
                      +E TP L+K L  VK+  AA G  H   +D+ GR Y +G         +
Sbjct: 67  RGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
               + G   RR  +I K    +    +V  GG H+ VLT  G ++TWG         G 
Sbjct: 127 PSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ----PWPPGD 182

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
           I  +  P RVQG            ++ L++ G  H  A+ E   L W W          G
Sbjct: 183 IKQISVPVRVQG----------LENVRLIAVGAFHNLALKEDGTL-WAW----------G 221

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           ++  GQLG G+     +P  V   +++  + ++ G  H+ AL
Sbjct: 222 NNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTAL 263


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 156/339 (46%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G ++   +P +  +    S+  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 305 WGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNA 364

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+SG  +  +V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 365 GLLGHGSDVSHWI-PKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHG 423

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            +  + I  P +VE LSG+ T   A G   + AV              GK+ +WG G   
Sbjct: 424 DR--ENISYPKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 481

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V+  G   V
Sbjct: 482 RLGHGDKEPRL---------KPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGS-TV 531

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L       + P L+    + E   EV CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 532 YGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGD 591

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           ++   +P  V     E+  D+    +  ++CG  +TAAI
Sbjct: 592 VEDRKTPTLV-----EALKDR---HVKYIACGSNYTAAI 622



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 169/372 (45%), Gaps = 56/372 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G V+  G    G+LG  + +++   ++P  +  L    +  ++ G 
Sbjct: 286 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDV---IQPRMVESLAASSIGFVACGE 342

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T+ GELY WG  ++  G LG G   +  IP   +V   L G+       G   +
Sbjct: 343 FHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIP--KRVSGPLEGLQVTSVTCGPWHT 400

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   +I           P+ ++ L G++    A G  H
Sbjct: 401 ALVTSMGQLFTFGDGTFGALGHGDRENI---------SYPKEVESLSGLRTIAVACGVWH 451

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCG 296
           +A + E           +G+++ +GD   +++   +     +P+ +  L  Y   +V CG
Sbjct: 452 TAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACG 511

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSC 355
              T  LT+ G++++ GS   G LG  S D         G       D++   S+  VSC
Sbjct: 512 HSITVGLTTSGQVFSMGSTVYGQLGNPSAD---------GKIPCLVEDKLFGESVEEVSC 562

Query: 356 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           G  H   + S+ ++ TWG G +            G+LGHG+  D   PT+V   ++    
Sbjct: 563 GAYHVVVLTSKNEVYTWGKGAN------------GRLGHGDVEDRKTPTLVEALKDRHVK 610

Query: 415 QVSCGFNHTGAL 426
            ++CG N+T A+
Sbjct: 611 YIACGSNYTAAI 622



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PR ++    + +   A G  H+A +   G V+ +G+ +  ++         +P ++  L 
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLA 331

Query: 289 YSEE--VVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            S    V CG +HTC +T  GELYTWG  ++  G LG GS DV H  P+RV GP      
Sbjct: 332 ASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGS-DVSHWIPKRVSGPLE---- 386

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 +  V+CG  HTA + S G++ T+G     GTF        G LGHG+  +  +P
Sbjct: 387 ---GLQVTSVTCGPWHTALVTSMGQLFTFG----DGTF--------GALGHGDRENISYP 431

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V     ++ + V+CG  HT A++E +
Sbjct: 432 KEVESLSGLRTIAVACGVWHTAAVVEVI 459



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 32/185 (17%)

Query: 254 DENGRVYIFGDRAVDKMLF--QEGNHAR---RPSLISKLPYSEEVV-------CGGYHTC 301
           D  G VYI+G+   D ++    E N +    R  ++   P    +V       CG  H  
Sbjct: 235 DALGDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVLLPRPLESNIVLDIHHIACGVRHAA 294

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
           ++T  GE++TWG    G LG G +  +  P  V+            +SI  V+CG  HT 
Sbjct: 295 LVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVES--------LAASSIGFVACGEFHTC 346

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCG 419
           A++  G++ TWG          DG  + G LGHG+DV +  P  V+   E ++   V+CG
Sbjct: 347 AVTITGELYTWG----------DGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCG 396

Query: 420 FNHTG 424
             HT 
Sbjct: 397 PWHTA 401


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L     S+      
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++      H+ R  
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431

Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
              P LI  +  +  ++ CG YHT   V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 30/313 (9%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--I 363
            G+++T+G       G  S  + HSP   +G      ++ I   +  + CG  HT A   
Sbjct: 410 DGQVFTFG-------GSSSEQLQHSPRSGRG--GPQLIEGIGGHVSQIECGSYHTIAYVY 460

Query: 364 SEGKILTWGWGGS 376
           + G++++ G G S
Sbjct: 461 TTGQVVSLGRGPS 473



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 31/266 (11%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 220

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 221 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 280

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 281 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 339

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHP 402
            Q       V+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P
Sbjct: 340 AQ-------VAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKP 383

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
             +   + +  + +SCG+ HT  L E
Sbjct: 384 HSIGALKTLNVVYISCGYEHTSVLTE 409


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 179/413 (43%), Gaps = 62/413 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G  E        +A +  ++ A+  G  ++L +   G ++  G N  G 
Sbjct: 16  WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
           LG          P  +  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 76  LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAER 135

Query: 158 ---GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
              G +A  + IPIP    C   +  +Q A G   SV +T  G V +WG           
Sbjct: 136 KEDGTRALRRDIPIPQG--CAPKLKVRQVAAGGTHSVVLTQDGHVWTWG----------- 182

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S  TP  ++ LE   VK+ A G  H+  + E+G ++ +G+    ++   
Sbjct: 183 QPWPPGDIKQIS--TPVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G     H  
Sbjct: 239 DTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV 298

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V+    E         I+ VSCG  H+ A++ +G++ ++G  G H           G
Sbjct: 299 PQKVELLAGE--------DIIQVSCGGTHSVALTRDGRMFSYG-RGDH-----------G 338

Query: 390 QLGHGNDVDYIHPTIV------------NFGENVKALQVSCGFNHTGALLEYV 430
           +LG+G  V   HP  V            + G   +A  V+CG  HT A+  + 
Sbjct: 339 RLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIATWT 391



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 146/340 (42%), Gaps = 32/340 (9%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLR--ISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            V A G  + GQLG+    GY  E     ++ L    V  +  G  +S AI  DG L+ W
Sbjct: 12  AVLAWGSGEDGQLGMG---GYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTW 68

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N  G LG   +  K    P  V+ L+G+   QAA+G    +AV   G+  +WG    G
Sbjct: 69  GWNQRGTLGHPPET-KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYG 127

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G   E    G  R+     P        +KV+  AAG  HS  + ++G V+ +G    
Sbjct: 128 QCGEEAERKEDG-TRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP 186

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              + Q       P  +  L   + +  G +H   LT  G L+ WG+NE G LG G    
Sbjct: 187 PGDIKQ----ISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQP 242

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
              P RV+G    S VD       + + GW  TA   EG++  WG  G H          
Sbjct: 243 RSQPIRVEGLSDLSLVD-------IAAGGWHSTALTKEGEVYAWG-RGEH---------- 284

Query: 388 GGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LG G+D   ++ P  V        +QVSCG  H+ AL
Sbjct: 285 -GRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVAL 323


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L     S+      
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++      H+ R  
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431

Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
              P LI  +  +  ++ CG YHT   V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 30/313 (9%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--I 363
            G+++T+G       G  S  + HSP   +G      ++ I   +  + CG  HT A   
Sbjct: 410 DGQVFTFG-------GSSSEQLQHSPRSGRG--GPQLIEGIGGHVSQIECGSYHTIAYVY 460

Query: 364 SEGKILTWGWGGS 376
           + G++++ G G S
Sbjct: 461 TTGQVVSLGRGPS 473



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 31/266 (11%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 220

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 221 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 280

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 281 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 339

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHP 402
            Q       V+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P
Sbjct: 340 AQ-------VAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKP 383

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
             +   + +  + +SCG+ HT  L E
Sbjct: 384 HSIGALKTLNVVYISCGYEHTSVLTE 409


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 182/416 (43%), Gaps = 66/416 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E +    V  A E  +++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT+ GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V     E         I+ VSCG  H+ A++ +G+I ++G  G H           G
Sbjct: 293 PQKVNLLAGE--------DIIQVSCGGTHSVALTRDGRIFSFG-RGDH-----------G 332

Query: 390 QLGHGNDVD---------YIHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 429
           +LG+G  V          +I P    F    +       A  V+CG  HT A++E+
Sbjct: 333 RLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEW 388



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 78/282 (27%)

Query: 198 VLSWGAGGSGRLGHGQES-----------------SILGFLRST---------------- 224
           V++WG+G  G+LG G +                  S++G  R++                
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 225 -----------SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
                      +E TP L+K L  VK+  AA G  H   +D+ GR Y +G         +
Sbjct: 67  RGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
               + G   RR  +I K    +    +V  GG H+ VLT  G ++TWG         G 
Sbjct: 127 PSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ----PWPPGD 182

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
           I  +  P RVQG            ++ L++ G  H  A+ E   L W W          G
Sbjct: 183 IKQISVPVRVQG----------LENVRLIAVGAFHNLALKEDGTL-WAW----------G 221

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           ++  GQLG G+     +P  V   +++  + ++ G  H+ AL
Sbjct: 222 NNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTAL 263


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG  +
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111

Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
            N G  L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A + 
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168

Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S
Sbjct: 169 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
            ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +   
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276

Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P ++ K    E   C   HT    T GG +Y WG      + +  +    S + V   F
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336

Query: 339 SESPV 343
           +   V
Sbjct: 337 ATPAV 341



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 34/300 (11%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
           L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +
Sbjct: 35  LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 93

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           GE++ WG N+  QLG G   A ++P       LS     + A G   S+ +T  G+V +W
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
           G   SG++G G          + ++  PR +      KV +  A G + S  +   G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 203

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++G     ++      +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 319 CLGIGSIDVLHSPERVQGPFSESPV----DQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            LG G+      P         +PV    D+I   I + +C   HT+A     G +  WG
Sbjct: 264 QLGTGNKSNQSYP---------TPVVVEKDRI---IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   +  +ACG   ++ +  TG V+  G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
           + +  P P  VE    I    A      S A T GG V  WG   G S  L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  ++ L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L SK+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQSKVVVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           ++ WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 250

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG++  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 251 EGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 298

Query: 425 A 425
           A
Sbjct: 299 A 299



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 AGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 174 VTGCLQSKVV-------VNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLG 214

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 215 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 250



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|297792001|ref|XP_002863885.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297309720|gb|EFH40144.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 454

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 195/448 (43%), Gaps = 78/448 (17%)

Query: 25  GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
           G+ +R  +ST  +RR    +G+G++G LGL S          + P V S      +  ++
Sbjct: 30  GLVRRQFTSTRGERRTVMSFGDGNHGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISFIS 88

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHH 134
            G  H+L +T  G ++A G ND GQLG   +        EP R+ GL    V +   +  
Sbjct: 89  AGHYHSLAVTFGGEIWAWGRNDEGQLGRIAVDSGRDSRSEPKRVEGLDN--VNVRAAFAS 146

Query: 135 ---SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
              S+AI  DG L++WG++  GQLGLGK   +   +P++VE L+     + +LG+  ++A
Sbjct: 147 GVVSAAIGDDGSLWVWGRSKRGQLGLGKGIIEA-RVPSRVETLAAEHVVKVSLGWGHALA 205

Query: 192 VTGGGKVLSWGAGGSGRLGH---GQESSILGFLRSTS----------------------- 225
           +T  GKV  WG    GR+G+     E+S+L  +   S                       
Sbjct: 206 LTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKDQHAADLNLEAAEKKVVEAMS 265

Query: 226 -------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   + P L++E   VKV   A G  HS  +  +G +   G     ++   + +  
Sbjct: 266 KENDMPIAWEPCLVEETRNVKVADIACGSDHSLILCHDGTLLSSGSNIYGQLGRSKQDLG 325

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGE--LYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  I++ P S  +  G  H+  + +  E  + +WG N +  LG G  +  H P  V+G
Sbjct: 326 MTPVDITESPIS--IAAGLGHSLAICNRDERKILSWGWNRSRQLGRGKPE--HLPREVEG 381

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
              ESP          VS G  H+  ++E G+   WG G              G+LG G+
Sbjct: 382 FDGESPAS--------VSAGRVHSLCVTEKGEAWVWGCG------------KNGRLGLGS 421

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHT 423
             D   P ++   E    LQ   GF+H+
Sbjct: 422 SSDEPEPMLLEDIEGC-VLQTVAGFDHS 448



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 51/179 (28%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--------------- 104
           W P +        +  +ACG  H+L L   G + ++G N +GQLG               
Sbjct: 274 WEPCLVEETRNVKVADIACGSDHSLILCHDGTLLSSGSNIYGQLGRSKQDLGMTPVDITE 333

Query: 105 ----ISENIGYSLE----------------------------PLRISGLKKE-VVQISTG 131
               I+  +G+SL                             P  + G   E    +S G
Sbjct: 334 SPISIAAGLGHSLAICNRDERKILSWGWNRSRQLGRGKPEHLPREVEGFDGESPASVSAG 393

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
             HS  +T  GE ++WG   NG+LGLG  + +  P P  +E + G   +  A GF+ S+
Sbjct: 394 RVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDE--PEPMLLEDIEGCVLQTVA-GFDHSL 449



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 25/158 (15%)

Query: 275 GNHARRPSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSI----DVLH 329
           G  A  P+++S LP     +  G YH+  +T GGE++ WG N+ G LG  ++    D   
Sbjct: 68  GMDAYEPTVVSNLPSDISFISAGHYHSLAVTFGGEIWAWGRNDEGQLGRIAVDSGRDSRS 127

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 389
            P+RV+G      +D +       S G    A   +G +  W            G S  G
Sbjct: 128 EPKRVEG------LDNVNVRAAFAS-GVVSAAIGDDGSLWVW------------GRSKRG 168

Query: 390 QLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           QLG G   ++   P+ V        ++VS G+ H  AL
Sbjct: 169 QLGLGKGIIEARVPSRVETLAAEHVVKVSLGWGHALAL 206


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P          +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 143/324 (44%), Gaps = 39/324 (12%)

Query: 64  VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           +CS  E   ++  AC     G   L+ T    ++  G N  G LG+ + +  ++EP R+ 
Sbjct: 12  LCSEAELQLIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLD 69

Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P       LS  
Sbjct: 70  CLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 128

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +     
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 179

Query: 238 VKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
            KV +  A G + S  + + G VY++G     ++      +   P  +S L     + V 
Sbjct: 180 NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVA 239

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQICTSI 350
           CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+I   I
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDRI---I 287

Query: 351 VLVSCGWKHTAAISE--GKILTWG 372
            + +C   HT+A     G +  WG
Sbjct: 288 EIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 47/298 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++CLSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDCLSG--KKIACLSYGSGPHVVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVDTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           +Y WG N NG LG+GS     +P RV      S +  I   +  V+CG+ HT  ++ EG+
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRV------SALQGI--RVQRVACGYAHTLVLTDEGQ 253

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           +  WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 254 VYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG   + A+ + G++  WG+ G+            GQLG
Sbjct: 174 VTGCLQNKVV-------VNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLG 214

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V+  + ++  +V+CG+ HT  L +
Sbjct: 215 LGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTD 250



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   SA +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 151/339 (44%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  +    P +  +    S+  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  ++  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K  + +  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+VY  G   V
Sbjct: 473 RLGHGDKEPRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 522

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L       + P L+  KL     EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 523 YGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGD 582

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           ++   +P  V     E  V  I       +CG   TAAI
Sbjct: 583 VEDRKAPTLVDA-LKERHVKNI-------ACGSNFTAAI 613



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 168/370 (45%), Gaps = 52/370 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYH 133
           +ACG  H   ++  G V+  G    G+LG    +G  +  P  I  L    +  ++ G  
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLG--HGMGKDVTGPQLIESLAATSIDFVACGEF 334

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ A+T+ GE+Y WG  ++  G LG G   +  IP   ++   L G+     + G   + 
Sbjct: 335 HTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP--KRISGPLEGLQIASVSCGPWHTA 392

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G++ ++G G  G LGHG + ++         + PR ++ L G++    A G  H+
Sbjct: 393 LITSTGQLFTFGDGTFGVLGHGDKETV---------FYPREVESLSGLRTIAVACGVWHA 443

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
           A I E           +G+++ +GD    ++   +     +P+ +S L       V CG 
Sbjct: 444 AAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGH 503

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             T  LT+ G++YT GS   G LG  + D    P  V+   ++  V++I       +CG 
Sbjct: 504 SLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLTKDCVEEI-------ACGA 555

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H A + S  ++ TWG G +            G+LGHG+  D   PT+V+  +      +
Sbjct: 556 YHVAVLTSRNEVFTWGKGAN------------GRLGHGDVEDRKAPTLVDALKERHVKNI 603

Query: 417 SCGFNHTGAL 426
           +CG N T A+
Sbjct: 604 ACGSNFTAAI 613



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 136/313 (43%), Gaps = 60/313 (19%)

Query: 142 GELYMWGK---------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           G++Y+WG+          ++  +G LG ++  +IP P +   +  +     A G + +  
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAAL 286

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           V+  G+V +WG    GRLGHG    + G         P+LI+ L    +   A G  H+ 
Sbjct: 287 VSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSIDFVACGEFHTC 337

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTS 305
            +   G +Y +GD   +  L   G       P  IS  P        V CG +HT ++TS
Sbjct: 338 AVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITS 396

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G+L+T+G    G LG G  + +  P  V+   S S +  I      V+CG  H AAI E
Sbjct: 397 TGQLFTFGDGTFGVLGHGDKETVFYPREVE---SLSGLRTIA-----VACGVWHAAAIVE 448

Query: 366 ------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
                       GK+ TWG          DG  S  +LGHG+    + PT V+   +   
Sbjct: 449 VIVTHSSSSVSSGKLFTWG----------DGDKS--RLGHGDKEPRLKPTCVSALIDHTF 496

Query: 414 LQVSCGFNHTGAL 426
            +V+CG + T  L
Sbjct: 497 HRVACGHSLTVGL 509



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 27/220 (12%)

Query: 218 LGFLRSTSE-YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +G+L S S+   P+ ++    + V   A G  H+A +   G V+ +G+ +  ++    G 
Sbjct: 251 IGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGK 310

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
               P LI  L  +  + V CG +HTC +T  GE+YTWG  ++  G LG G+ DV H  P
Sbjct: 311 DVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGT-DVSHWIP 369

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           +R+ GP            I  VSCG  HTA I S G++ T+G     GTF        G 
Sbjct: 370 KRISGPLEG-------LQIASVSCGPWHTALITSTGQLFTFG----DGTF--------GV 410

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHG+     +P  V     ++ + V+CG  H  A++E +
Sbjct: 411 LGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVI 450


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 176/393 (44%), Gaps = 44/393 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 2793 WGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQL-IGGEQTLFAVTADGKLYATGYGAGG 2851

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 2852 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2909

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH      
Sbjct: 2910 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD---- 2963

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ E+  V+ +GD    K+     
Sbjct: 2964 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGS 3018

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  +  L    + +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 3019 DGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3078

Query: 334  VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
            VQG   +         ++ ++ G  H    +E G++ TW            G +  GQLG
Sbjct: 3079 VQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLG 3118

Query: 393  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G       P +V   +  K  +V+CG  HT A
Sbjct: 3119 DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3151



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +      VQ++ G     A+TV+G++Y  G+ +
Sbjct: 1796 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEAT 1855

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V P+P +V  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 1856 NGRLGLGVSSGTV-PVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKL 1914

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 1915 GH--------FSRXNCD-KPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965

Query: 270  MLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 1966 LGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2025

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2026 EGCNVPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2070

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2071 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2109



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 1834 GGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRH 1893

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+T DG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 1894 ATALTADGKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSSHSAALTS 1951

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 1952 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLA 2002

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2003 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2062

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2063 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 2114

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2115 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 1906 WGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    VVQ++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 1966 LGHGDNT-TQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2023

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2024 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2080

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2081 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2129

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2130 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2161



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 146/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 1852 GEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDD 1911

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG         +P  I  LK + +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 1912 GKLGHFSRXNCD-KPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 1970

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 1971 NTTQLKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2024

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2025 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2079

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2080 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2139

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 2140 GLEGQ--------KITRVACGSSHSVA 2158



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 148/342 (43%), Gaps = 40/342 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G VY  G N  GQLG  E     + P     L      Q+  G     A+T DG+LY  
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKV-PTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G  + G+  LG    + +  PT +E +  +F K+ A+  G +  +A++  G+V SWG   
Sbjct: 2846 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G  
Sbjct: 2904 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954

Query: 266  AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
               ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014

Query: 322  IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTF 380
             G  D    P +V                V V CG + + A+++ G + TWG G  H   
Sbjct: 3015 RGGSDGCKVPMKVDA--------LTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYH--- 3063

Query: 381  SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                     +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3064 ---------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3096



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 136/302 (45%), Gaps = 45/302 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 1788 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVE 1845

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVK-----KVAVHSGG-RHATALTA 1899

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 1900 DGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWG 1959

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILT 370
              E G LG G       P+ V+          +   +V V+CG +     A   EG + +
Sbjct: 1960 LGEYGRLGHGDNTTQLKPKMVKV--------LVGHRVVQVACGSRDAQTLALTDEGLVFS 2011

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTG 424
            WG     G F        G+LG G           N  +N++ L      Q+ CG   + 
Sbjct: 2012 WG----DGDF--------GKLGRGGSEG------CNVPQNIERLNGQGVCQIECGAQFSL 2053

Query: 425  AL 426
            AL
Sbjct: 2054 AL 2055



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G V  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 2786 GSGTVYGWGHNHRGQLGGVEGAKV---------KVPTPCEALAALRPAQLIGGEQTLFAV 2836

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 2837 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2896

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 2897 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGGL 2948

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 2949 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 2987


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG  +
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111

Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
            N G  L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A + 
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168

Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S
Sbjct: 169 -PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
            ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +   
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276

Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P ++ K    E   C   HT    T GG +Y WG      + +  +    S + V   F
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336

Query: 339 SESPV 343
           +   V
Sbjct: 337 ATPAV 341



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 34/300 (11%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
           L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +
Sbjct: 35  LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTE 93

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           GE++ WG N+  QLG G   A ++P       LS     + A G   S+ +T  G+V +W
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
           G   SG++G G          + ++  PR +      KV +  A G + S  +   G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVF 203

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++G     ++      +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 319 CLGIGSIDVLHSPERVQGPFSESPV----DQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            LG G+      P         +PV    D+I   I + +C   HT+A     G +  WG
Sbjct: 264 QLGTGNKSNQSYP---------TPVVVEKDRI---IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   +  +ACG   ++ +  TG V+  G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
           + +  P P  VE    I    A      S A T GG V  WG   G S  L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 AGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 174 VTGCLQNKVV-------VNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLG 214

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 215 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 250



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ L+G   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLTG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  ++ L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           ++ WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 250

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG++  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 251 EGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 298

Query: 425 A 425
           A
Sbjct: 299 A 299



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Strongylocentrotus purpuratus]
          Length = 539

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 178/367 (48%), Gaps = 34/367 (9%)

Query: 39  FAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           FA L WG   YG+LGLG  +    P     F +  +K +  GG HT+FLT  G ++  G 
Sbjct: 149 FAYLAWGANSYGQLGLGHQKDHLLPENLKTFPE-DVKTIVGGGGHTVFLTGNGDLHVCGS 207

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           N+ GQLG+      + + +R+  L+  + +I+ G++H+ AIT + EL  WG N++GQL  
Sbjct: 208 NNKGQLGLGHTSDIN-KLVRVPDLRP-LKKIACGWNHTVAITENDELLCWGSNTHGQL-- 263

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                 ++  P ++E LSG+   + A    G   ++AV+  G++ +WGAG  G+LG    
Sbjct: 264 -THKESIVTKPRQIE-LSGVDCPRFAAISGGLRHTLAVSTDGQLWTWGAGKKGQLGWTDS 321

Query: 215 SSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
              +    +   + P  +KE +  VK    AAG  HSA + + G +YI+G     ++   
Sbjct: 322 KMRVPHQWNKPVHIP--VKEDDVDVKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLAQP 379

Query: 274 EGNH----ARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           + ++     +R  P+L   L   + +  G  H   +T    +YTWG N+ G LG  +   
Sbjct: 380 KSSNPISTPKRLDPALFDGLTI-KGIHSGWTHMLAITEDESVYTWGRNDYGQLGRPAAKS 438

Query: 328 LH--SPERVQGPFSESPVDQIC---TSIVL------VSCGWKHTAAIS-EGKILTWGWGG 375
           +   S E        +     C   T I +      + CG +H+ AI+ + K+L WGW  
Sbjct: 439 IPNGSAESESNATPTTTTPDCCHVPTEISILKNAKQIVCGAEHSLAITKDDKLLAWGW-N 497

Query: 376 SHGTFSE 382
            HG  ++
Sbjct: 498 EHGMCAD 504



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 169/378 (44%), Gaps = 67/378 (17%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G +TLF        A G N +GQLG+     + L P  +    ++V  I  G  H+  +T
Sbjct: 144 GVYTLF-----AYLAWGANSYGQLGLGHQKDHLL-PENLKTFPEDVKTIVGGGGHTVFLT 197

Query: 140 VDGELYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
            +G+L++ G N+ GQLGLG  +   K++ +P           K+ A G+  +VA+T   +
Sbjct: 198 GNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP------LKKIACGWNHTVAITENDE 251

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA---GFLHSACID 254
           +L WG+   G+L H +ES +           PR I EL GV     AA   G  H+  + 
Sbjct: 252 LLCWGSNTHGQLTH-KESIVT---------KPRQI-ELSGVDCPRFAAISGGLRHTLAVS 300

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEE--------VVCGGYHTCVL 303
            +G+++ +G     ++ + + +  R P   +K   +P  E+        V  G YH+  L
Sbjct: 301 TDGQLWTWGAGKKGQLGWTD-SKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAAL 359

Query: 304 TSGGELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           +  G LY WG N+   L    S + + +P+R+     +        +I  +  GW H  A
Sbjct: 360 SDMGILYIWGCNKWSQLAQPKSSNPISTPKRLDPALFDG------LTIKGIHSGWTHMLA 413

Query: 363 ISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGN------------DVDYIH-PTIVNFG 408
           I+E + + TWG       + + G  +   + +G+              D  H PT ++  
Sbjct: 414 ITEDESVYTWG----RNDYGQLGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISIL 469

Query: 409 ENVKALQVSCGFNHTGAL 426
           +N K  Q+ CG  H+ A+
Sbjct: 470 KNAK--QIVCGAEHSLAI 485



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 163/374 (43%), Gaps = 56/374 (14%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
            +K +  GG HT+FLT  G ++  G N+ GQLG+      + + +R+  L+  + QI  G
Sbjct: 23  DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDIN-KLVRVPDLRP-LKQIVCG 80

Query: 132 YHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPT-------KVECLSGIFTKQAA 183
           ++H+ AIT  DG L +  +    ++G      ++IP+P         V    G  + ++ 
Sbjct: 81  WNHTVAITGTDGSLELLHRGQFNEVG-----RELIPVPECSWEETLPVAVRVGAGSHESC 135

Query: 184 LGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVK 241
           +G    +  V      L+WGA   G+LG G +   L          P  +K   E VK  
Sbjct: 136 VGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHL---------LPENLKTFPEDVKTI 186

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           +   G  H+  +  NG +++ G     ++     +   +   +  L   +++ CG  HT 
Sbjct: 187 VGGGG--HTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKKIACGWNHTV 244

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +T   EL  WGSN +G L      ++  P +++     S VD  C     +S G +HT 
Sbjct: 245 AITENDELLCWGSNTHGQL-THKESIVTKPRQIE----LSGVD--CPRFAAISGGLRHTL 297

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--------DYIHPTIVNFGENVK 412
           A+S +G++ TWG G              GQLG  +            +H  +     +VK
Sbjct: 298 AVSTDGQLWTWGAG------------KKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVK 345

Query: 413 ALQVSCGFNHTGAL 426
            +QV+ G  H+ AL
Sbjct: 346 FVQVAAGAYHSAAL 359



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 125/280 (44%), Gaps = 44/280 (15%)

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIPIPTKVEC 173
           LRIS   ++V  I  G  H+  +T +G+L++ G N+ GQLGLG  +   K++ +P     
Sbjct: 15  LRISNFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP- 73

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLI 232
                 KQ   G+  +VA+T        G  GS  L H GQ + +   L    E +    
Sbjct: 74  -----LKQIVCGWNHTVAIT--------GTDGSLELLHRGQFNEVGRELIPVPECS---W 117

Query: 233 KELEGVKVKIAAAGFLHSACIDE----NGRVYIF-----GDRAVDKMLFQEGNHARRPSL 283
           +E   V V++ A    H +C+      NG   +F     G  +  ++          P  
Sbjct: 118 EETLPVAVRVGAGS--HESCVGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHLLPEN 175

Query: 284 ISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           +   P   + +V GG HT  LT  G+L+  GSN  G LG+G    ++   RV       P
Sbjct: 176 LKTFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVP---DLRP 232

Query: 343 VDQICTSIVLVSCGWKHTAAISEG-KILTWGWGGSHGTFS 381
           + +I       +CGW HT AI+E  ++L WG   +HG  +
Sbjct: 233 LKKI-------ACGWNHTVAITENDELLCWG-SNTHGQLT 264



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 49/229 (21%)

Query: 43  WGNGDYGRLGLGSLESR----W-RPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYA 94
           WG G  G+LG    + R    W +PV     E         +A G  H+  L++ G +Y 
Sbjct: 308 WGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDMGILYI 367

Query: 95  TGLNDFGQLGISEN-----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            G N + QL   ++         L+P    GL   +  I +G+ H  AIT D  +Y WG+
Sbjct: 368 WGCNKWSQLAQPKSSNPISTPKRLDPALFDGLT--IKGIHSGWTHMLAITEDESVYTWGR 425

Query: 150 NSNGQLGLGKKAAKVIP---------------------IPTKVECLSGIFTKQAALGFEQ 188
           N  GQ  LG+ AAK IP                     +PT++  L     KQ   G E 
Sbjct: 426 NDYGQ--LGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISILKN--AKQIVCGAEH 481

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
           S+A+T   K+L+WG    G    G ++++         + P+ ++ L+G
Sbjct: 482 SLAITKDDKLLAWGWNEHGMCADGTKTNV---------FLPKQVQGLDG 521


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  I+ L    
Sbjct: 175 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------APVIVEKDR 285

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 286 I---IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G              V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 174 VTGCLQNKVA-------VNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLG 214

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  +   + ++  +V+CG+ HT  L +
Sbjct: 215 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD 250



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVAVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P R+   QG             +  V+CG+ HT  ++ 
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRIAALQG-----------IRVQRVACGYAHTLVLTD 250

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG++  WG             +S GQLG GN  +  +P  V   ++      +C   HT 
Sbjct: 251 EGQVYAWG------------ANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTS 298

Query: 425 A 425
           A
Sbjct: 299 A 299



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSFEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4247 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4286

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4287 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3195 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3239

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3240 --------RLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3283

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 148/327 (45%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3309 GLEGQ--------KITRVACGSSHSVA 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 271 LFQEGNHARRPSLISK 286
              +   A  P L +K
Sbjct: 747 RITKPEPAALPGLDTK 762



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3178

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3179 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3220

Query: 423  TGAL 426
            + AL
Sbjct: 3221 SLAL 3224



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4187 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4232

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4233 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG    +           P++I  L G +    V   A 
Sbjct: 509 LALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKMISALSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              IV V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDIVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ TWG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYTWGKGDNQ------------RLGHGTEEHVRYPKLLEGLKGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A          
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA------- 4007

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+  GE+
Sbjct: 4008 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEV 4065

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G +
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------IAAGGAHSACITAAGDL 4117

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V   +  + + ++CG
Sbjct: 4118 FTWGKG------------RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 174/374 (46%), Gaps = 54/374 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 311 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIEALSNTNIELVA 367

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +HS A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 368 CGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSYISCGP 425

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 426 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAACG 476

Query: 247 FLHSACIDEN--GRVYIFGDRAVDKMLFQEGNHARR----------PSLISKLPYSE-EV 293
             H+A + E   G        +VD   + +G+  R           P+ ++   ++  +V
Sbjct: 477 VWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQV 536

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CG   T  LT+ G +YT GS   G LG    D    P  V+G  SES V++I       
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADG-KLPILVEGKLSESFVEEI------- 588

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++  
Sbjct: 589 ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNTPTLVEALKDKD 636

Query: 413 ALQVSCGFNHTGAL 426
              ++CG   T A+
Sbjct: 637 VKSIACGTTFTAAI 650



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 158/348 (45%), Gaps = 57/348 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  H+  +T +G +Y    G  ++
Sbjct: 333 WGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNY 392

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 393 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 451

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P +VE L G+ T +AA G   + AV                 + +WG G  
Sbjct: 452 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDK 509

Query: 207 GRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           GRLGH  +E+ ++    + +E+            V   A G   +  +  +GRVY  G  
Sbjct: 510 GRLGHVDKEAKLVPTCVALAEHN-----------VCQVACGHSLTVALTTSGRVYTMGS- 557

Query: 266 AVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
               +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG  
Sbjct: 558 ---PVYGQLGN----PQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKG 610

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            NG LG G  D  ++P  V     E+  D+   SI   +CG   TAAI
Sbjct: 611 ANGRLGHGDTDDRNTPTLV-----EALKDKDVKSI---ACGTTFTAAI 650



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 60/313 (19%)

Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           G++++WG+ +        N ++G  LG K   + P    +E    +  +  A G   +  
Sbjct: 266 GDVFIWGEGTGDGVLGGGNHRVGSCLGAKMDSLFP--KALESAVVLDVQNIACGGRHAAL 323

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G+V SWG    GRLGHG +S +L          P+LI+ L    +++ A G  HS 
Sbjct: 324 VTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHSC 374

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
            +  +G +Y +G+   +  L   GN      P  ++   +  +   + CG +HT V+TS 
Sbjct: 375 AVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 434

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           G+L+T+G    G LG G    +  P  V+       +  + T  V  +CG  HTAA+ E 
Sbjct: 435 GQLFTFGDGTFGALGHGDRKSVSLPREVES------LKGLRT--VRAACGVWHTAAVVEV 486

Query: 366 ------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
                         + TWG G              G+LGH +    + PT V   E+   
Sbjct: 487 MVGNSSSSNCSSVDLFTWGDGDK------------GRLGHVDKEAKLVPTCVALAEH-NV 533

Query: 414 LQVSCGFNHTGAL 426
            QV+CG + T AL
Sbjct: 534 CQVACGHSLTVAL 546



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 24/207 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++     +    P LI  L 
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALS 359

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YH+C +T  G+LYTWG+     G LG G+      P+RV GP       
Sbjct: 360 NTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEG---- 415

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
                +  +SCG  HTA + S G++ T+G     GTF        G LGHG+      P 
Sbjct: 416 ---IHVSYISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGDRKSVSLPR 460

Query: 404 IVNFGENVKALQVSCGFNHTGALLEYV 430
            V   + ++ ++ +CG  HT A++E +
Sbjct: 461 EVESLKGLRTVRAACGVWHTAAVVEVM 487


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 53  GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L     S+      
Sbjct: 173 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 225

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++      H+ R  
Sbjct: 226 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 280

Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
              P LI  +  +  ++ CG YHT   V T+G
Sbjct: 281 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 312



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 30/313 (9%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 31  LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 88

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 89  KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 199

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 200 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA--I 363
            G+++T+G       G  S  + HSP   +G      ++ I   +  + CG  HT A   
Sbjct: 259 DGQVFTFG-------GSSSEQLQHSPRSGRG--GPQLIEGIGGHVSQIECGSYHTIAYVY 309

Query: 364 SEGKILTWGWGGS 376
           + G++++ G G S
Sbjct: 310 TTGQVVSLGRGPS 322



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 104 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 163

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 164 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 223

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S
Sbjct: 224 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 279



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 31/266 (11%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 19  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 69

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 70  RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 129

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 130 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 188

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHP 402
            Q       V+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P
Sbjct: 189 AQ-------VAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKP 232

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
             +   + +  + +SCG+ HT  L E
Sbjct: 233 HSIGALKTLNVVYISCGYEHTSVLTE 258


>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
          Length = 620

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 31/346 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K+DI +    G     I++   + F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 73  SKFWFKRDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 130

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
              +K +ACG  HTL LT  G VYATG N+ GQLG+    E   + L     S  K  + 
Sbjct: 131 PEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 188

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAAL 184
           Q+S G + S+A+T +GELY +G+  +G+LGL  K      +P   + + GI  K  Q A 
Sbjct: 189 QLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVP---QLVPGISEKVIQVAC 245

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   +V +T    V ++G G  G+LG G       F   TSE  P++I+ ++  K+    
Sbjct: 246 GGGHTVVLTEKA-VYTFGLGQFGQLGLGT------FTFETSE--PKVIESVKDKKISHVC 296

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHT 300
            G  H+A I E+G +Y FGD    K+     N   +  P+L S  L Y   +V CGG H 
Sbjct: 297 CGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGGCHM 356

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
            V  +       G  E+  +    I+  + P  +  P S+ P++ +
Sbjct: 357 LVFATP----RLGMAED--IESDEINYSYLPSAIYVPISDPPLENV 396



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 47/321 (14%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
           E+ +  +    G     + ++G V+      FG+   +EN+     P +    +   + +
Sbjct: 36  EEQAFHSAITMGEPDKMVPDSGAVFT-----FGKTKFAENM-----PSKFWFKRDIPISL 85

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  H++  T + +L+M+G N+ GQLGLG KA   +  PT ++ L     K  A G   
Sbjct: 86  SCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNH 143

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIA 243
           ++ +TGGG+V + G    G+LG G         ++ F   TS++           K+K  
Sbjct: 144 TLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFF--TSQH-----------KIKQL 190

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSEEVV---CGG 297
           +AG   SA +   G +Y FG+    K+        NH + P L+  +  SE+V+   CGG
Sbjct: 191 SAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNH-KVPQLVPGI--SEKVIQVACGG 247

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
            HT VLT    +YT+G  + G LG+G+     S  +V     +  +  +C       CG 
Sbjct: 248 GHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVC-------CGE 299

Query: 358 KHTAAISEGKILTWGWGGSHG 378
            HTA I+E  +L     G HG
Sbjct: 300 NHTALITESGLLYTFGDGRHG 320



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 139/335 (41%), Gaps = 61/335 (18%)

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIP- 166
           + + L P R+     + +     +H  SAIT+ GE      +S      GK K A+ +P 
Sbjct: 19  LRHCLRPSRVDA--ADFLAEEQAFH--SAITM-GEPDKMVPDSGAVFTFGKTKFAENMPS 73

Query: 167 -------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  IP  + C           G E +   TG  K+  +G+   G+LG G ++++  
Sbjct: 74  KFWFKRDIPISLSC-----------GDEHTAITTGNNKLFMFGSNNWGQLGLGSKATV-- 120

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  IK L+  KVK  A G  H+  +   G+VY  G     ++   + +   
Sbjct: 121 -------NKPTCIKALKPEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERS 173

Query: 280 RPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHS-PERV 334
              LIS        +++  G   +  LT+ GELYT+G  E+G LG+   + V H  P+ V
Sbjct: 174 AFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLV 233

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            G         I   ++ V+CG  HT  ++E  + T+G G              GQLG G
Sbjct: 234 PG---------ISEKVIQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLG 272

Query: 395 N-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               +   P ++   ++ K   V CG NHT  + E
Sbjct: 273 TFTFETSEPKVIESVKDKKISHVCCGENHTALITE 307


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 33/336 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA G N+ G
Sbjct: 58  MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117

Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +    S    +     ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL   
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +P    V    G      + G+  S  VT  G++ ++G    G+LG   +  +   
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
               +   P+ +  + G  V++A  G  H+  + E   VY      FG   +   LF+  
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                P  I  +   +   + CG  HT ++T  G +YT+G   +G LG+G        E 
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGL-------EN 333

Query: 334 VQGPFSESPVDQICTSIV-LVSCGWKHTAAISEGKI 368
               F  +        IV LVSCG  HT   +  ++
Sbjct: 334 STNQFIPTLCSNFLRFIVQLVSCGGCHTLVFATPRL 369



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 156/330 (47%), Gaps = 35/330 (10%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          +S G  H++ +T + +LYM+G N+ GQLGLG 
Sbjct: 17  FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K+   +  PT V+ L     K AA G   ++  T GGKV + G    G+LG G       
Sbjct: 72  KST--VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   + R IK+L        +AG   SA + E+G ++++GD +  ++  +   +  
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  ++       + CG YH+  +T+ G+LYT+G  E G LG+ +  +++   R+     
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRM----- 234

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-D 398
             PV  I   +V V+CG  HT  ++E  + T+G G              GQLG G  + +
Sbjct: 235 PQPVPGIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFE 282

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              P  +   ++ K   ++CG NHT  + +
Sbjct: 283 TSVPKAIEHIKDQKISFIACGENHTALITD 312



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 163/361 (45%), Gaps = 52/361 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  +  LK E V+ +  G +H
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G++Y  G N+ GQLGLG    +          L   FT     KQ + G   S
Sbjct: 99  TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G+         +G    T+   P+ +    G  +   + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQ---------IGLENVTNVCVPQQVT--VGKPISWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +   G++Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
              +YT+G  + G LG+G+     S P+ +     E   DQ    I  ++CG  HTA I+
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAI-----EHIKDQ---KISFIACGENHTALIT 311

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 422
           + G + T+G  G HG            LG  N  +   PT+  NF   +  L VSCG  H
Sbjct: 312 DMGLMYTFG-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCH 360

Query: 423 T 423
           T
Sbjct: 361 T 361


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 171/350 (48%), Gaps = 37/350 (10%)

Query: 44  GNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           GN   G+LGLG + E   R +      K+ LK   +ACG  H++ L + G V++ G NDF
Sbjct: 22  GNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDF 81

Query: 101 GQLG---------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            QLG         + EN+ + ++ ++ S +   V+ ++ G  H  A+T DG L+ WG N 
Sbjct: 82  YQLGHDGIKRKPNLYENLHWYID-VKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNV 140

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLG 210
            GQLG+ +          +++ ++     Q A G   S+A+     VL +WG    G+LG
Sbjct: 141 YGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLG 200

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G   S +G         P  + +L G+ +   AAG  HS  +  +G V+ +G     ++
Sbjct: 201 IGTRESFIG---------PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQI 251

Query: 271 LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              E      PSL+ KL  +++V+   CG   +  +T+ G L+T+G+   G LG G+ + 
Sbjct: 252 GQNEQRDILYPSLV-KLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNS 310

Query: 328 LHSPERVQGPFSESPVDQICTSIVL-VSCGWKHTAAISEGKILTWGWGGS 376
              P++V          ++  S+VL V+CG  HT AI+E K+  +G   S
Sbjct: 311 ELFPKQVM---------ELMGSVVLDVACGRCHTLAITENKLYAFGLNTS 351



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 17/225 (7%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
           WG+  YG+LG+  +   ++ R          ++  +ACG  H+L L  T G ++A GLND
Sbjct: 136 WGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLND 195

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLGI     + + P  ++ L    + Q++ G  HS  +T  G ++ WGKN  GQ+G  
Sbjct: 196 HGQLGIGTRESF-IGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIG-- 252

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           +   + I  P+ V+ L      + A G + SVAVT  G + ++GAG  G+LGHG ++   
Sbjct: 253 QNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQN--- 309

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 SE  P+ + EL G  V   A G  H+  I EN ++Y FG
Sbjct: 310 ------SELFPKQVMELMGSVVLDVACGRCHTLAITEN-KLYAFG 347



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 5   SLTAMTKYYLKQDIKLGSKLGI-CKRWISSTLQRRFAAL--WGNGDYGRLGLGSLESRWR 61
           ++ A  +Y   Q+I L + + I C    S  L+     L  WG  D+G+LG+G+ ES   
Sbjct: 150 NVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIG 209

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P   +      +  LA G +H+L LT +G V+  G N FGQ+G +E     L P  +  L
Sbjct: 210 PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDI-LYPSLVKLL 268

Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           + ++V++++ G   S A+T  G L+ +G  + GQLG G + +++   P +V  L G    
Sbjct: 269 RTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSEL--FPKQVMELMGSVVL 326

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             A G   ++A+T   K+ ++G   SG+LG
Sbjct: 327 DVACGRCHTLAIT-ENKLYAFGLNTSGQLG 355



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 148/343 (43%), Gaps = 44/343 (12%)

Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLG   I+E    SL  +  +    ++ QI+ G HHS  +  DG ++  G N   QLG 
Sbjct: 27  GQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGH 86

Query: 158 G--KKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
              K+   +       I  K +   GI     A G    VA+T  G + SWG+   G+LG
Sbjct: 87  DGIKRKPNLYENLHWYIDVK-QSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLG 145

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDK 269
             + + +     + + Y PR I+E+    +   A G  HS  ++  +G ++ +G     +
Sbjct: 146 VERMNVV-----AKARY-PR-IQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQ 198

Query: 270 MLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +          P+ ++KL   P   ++  G  H+ VLT  G ++ WG N  G +G     
Sbjct: 199 LGIGTRESFIGPTTVNKLMGIPIC-QLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQR 257

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 385
            +  P  V+   ++         ++ ++CG   + A++  G + T+G G           
Sbjct: 258 DILYPSLVKLLRTQ--------KVIRLACGEDFSVAVTATGGLFTFGAG----------- 298

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            + GQLGHGN    + P  V        L V+CG  HT A+ E
Sbjct: 299 -TYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE 340



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G++G         P +        +  LACG   ++ +T TG ++  G   +GQ
Sbjct: 243 WGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQ 302

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKK 160
           LG   N    L P ++  L   VV  ++ G  H+ AIT + +LY +G N++GQLG L  K
Sbjct: 303 LG-HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAIT-ENKLYAFGLNTSGQLGLLNVK 360

Query: 161 AAKVIPIPTKVE 172
               IP+P  +E
Sbjct: 361 HTTSIPLPIPIE 372


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 156/344 (45%), Gaps = 43/344 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
           WG    GRLG G       P +   F+  +++   CG  HT  +T +G +YA G  D   
Sbjct: 328 WGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNA 387

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG+     +  +P+RI G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 388 GLLGLGSGASH-WKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHG 446

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
            + +    IP +VE L+G  T + A G   S AV       +  GK+ +WG G  G+LGH
Sbjct: 447 DRIS--TNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGH 504

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
           G  +S L          P  + EL+    +  A G   +  +  +G+VY  G  D + D 
Sbjct: 505 GDIASRL---------IPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQDD 555

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++       R PS I       + +EV CG +H  VL S  E+YTWG   NG LG G  +
Sbjct: 556 VV-------RAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 608

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
               P  V+    +         +  V CG  +TA I   K +T
Sbjct: 609 YRRMPTLVKALKGK--------QVRKVVCGSNYTATICLHKPIT 644



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 58/383 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P V  +      ++++CG  + + +T+ G +Y+ G    G+LG      Y   P  I   
Sbjct: 295 PKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGV-CSYVPHPKLIDEF 353

Query: 122 KKEVVQIST-GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
               V+++  G  H+ A+T  G+LY WG   ++ G LGLG  A+   P+    + + GI 
Sbjct: 354 DGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIN 412

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            +  + G   +  VT  GK+ ++G G  G LGHG            S   PR ++ L G 
Sbjct: 413 VRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGC 463

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ----------EGNHARR--PSLISK 286
           +    A G  HSA +     V +FG+ +    LF            G+ A R  P  +++
Sbjct: 464 RTIRTACGVWHSAAV-----VSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTE 518

Query: 287 LPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           L  +  ++V CG   T  L+  G++Y  G+ +         DV+ +P  ++G   +S V 
Sbjct: 519 LDTTSFQQVACGQSITVALSMSGQVYAMGTADPS-----QDDVVRAPSCIEGGLGKSFVQ 573

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
           +       V+CG+ H A + S+ ++ TWG G            S GQLGHG+      PT
Sbjct: 574 E-------VACGYHHIAVLNSKAEVYTWGKG------------SNGQLGHGDTEYRRMPT 614

Query: 404 IVNFGENVKALQVSCGFNHTGAL 426
           +V   +  +  +V CG N+T  +
Sbjct: 615 LVKALKGKQVRKVVCGSNYTATI 637



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 42/273 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  ++    +  +  + G   +V VT  G++ SWG    GRLGHG  S +         
Sbjct: 294 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPH------- 346

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
             P+LI E +G  V++A  G  H+  +  +G +Y +GD   +  L   G+ A     +  
Sbjct: 347 --PKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 404

Query: 287 LPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           L   E      + CG +HT  +TS G+L+T+G    G LG G     + P  V+      
Sbjct: 405 LGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEALNG-- 462

Query: 342 PVDQICTSIVLVSCGWKHTAAI--------SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                C +I   +CG  H+AA+        S GK+ TWG G              G+LGH
Sbjct: 463 -----CRTI-RTACGVWHSAAVVSVFGEASSSGKLFTWGDG------------DDGKLGH 504

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+    + P  V   +     QV+CG + T AL
Sbjct: 505 GDIASRLIPLSVTELDTTSFQQVACGQSITVAL 537



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 25/236 (10%)

Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           V  WG   G G LG G   S       T  + P+++K    +  +  + G  ++  + + 
Sbjct: 263 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 322

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           G++Y +G+ +  ++     ++   P LI +   S  E   CG +HTC +T+ G+LY WG 
Sbjct: 323 GQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGD 382

Query: 315 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
            ++  G LG+GS      P R+ G            ++  +SCG  HTA + S GK+ T+
Sbjct: 383 GDHNAGLLGLGSGASHWKPVRILGQMEG-------INVRTISCGPWHTAFVTSAGKLFTF 435

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           G     GTF        G LGHG+ +    P  V      + ++ +CG  H+ A++
Sbjct: 436 G----DGTF--------GALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVV 479


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 146/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 37/256 (14%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVK 239
           QAA G   S+ +    +VLS G    G+LG  G +   L          P  I+ LE + 
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL----------PEPIQALETLI 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCG 296
           V + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V CG
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCG 136

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
            YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ Q       V+ 
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ-------VAA 188

Query: 356 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVK 412
           G  H+ A+S     ++GWG           +S GQL   G    V    P  V   +N+ 
Sbjct: 189 GGAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 413 ALQVSCGFNHTGALLE 428
            + +SCG  HT  L +
Sbjct: 238 VVYISCGDAHTAVLTQ 253



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++        ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT------LNDI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 15/274 (5%)

Query: 44  GNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
             G  GR G      RW  P    A +      ++CG  H+L +   G V+A G    GQ
Sbjct: 51  SRGQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQ 106

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ E    +  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+ 
Sbjct: 107 LGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF 166

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G  
Sbjct: 167 PSQ-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRN 219

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 282 SLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
            L+ ++     ++ CGG HT   + + G++ ++G
Sbjct: 280 QLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 35/312 (11%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
           A G  H L L     V++ G N  GQLG      + L EP++ +  LK ++V  S G  H
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G +  ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGVG-ELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSG 306
             G  + +G  +  ++     N    + +P  I  L      Y   + CG  HT VL+  
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLSQD 254

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--S 364
           G+++T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   +
Sbjct: 255 GKVFTFGDNSSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGGDHTIAYVHT 305

Query: 365 EGKILTWGWGGS 376
            G+++++G G S
Sbjct: 306 TGQVVSFGRGPS 317



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 42/311 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  H+  +  +  ++  G+NS GQLG  ++ A    +P  V+ L  +     +
Sbjct: 24  ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TPR I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--PFSESPVDQICTSIVLVSCGW 357
           +  L+  G  + WGSN  G L +   +V     +VQ   P S   +  +   ++ +SCG 
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV-----QVQSNKPLSIGALKNL--GVIYISCGD 245

Query: 358 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-- 414
           +HTA +S+ GK+ T+            G +S GQLG+    +   P +V   E +  L  
Sbjct: 246 EHTAVLSQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVS 290

Query: 415 QVSCGFNHTGA 425
           Q+ CG +HT A
Sbjct: 291 QIDCGGDHTIA 301



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 30/276 (10%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L  +  +V    P  +  L  +     + G E +  ++  GKV ++G   SG+LG+  
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                G         P+L++ ++G+  +I   G    A +   G+V  FG          
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG---------- 313

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                R PS  SK P   E +   +    L S  +L
Sbjct: 314 -----RGPSATSK-PTHPEALKENFDIRCLISADDL 343



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 24/138 (17%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +   G  H  +L +   +++ G N  G LG         PE VQ   +            
Sbjct: 27  QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT--------LKFD 78

Query: 352 LVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFG 408
           LVSCG +H+ A+  +G++  WG G            S GQLG G   ++++  P  +   
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAG------------SEGQLGVGELKEINFT-PRKITTL 125

Query: 409 ENVKALQVSCGFNHTGAL 426
             +K +QVSCG  H+ AL
Sbjct: 126 NGIKIIQVSCGHYHSLAL 143


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 154/339 (45%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG+   GRLG G       P +  A    + + +ACG  H+  +T +G ++    G + +
Sbjct: 331 WGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSY 390

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I +   P R+ G  +   V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 391 GLLGHGNDISH-WTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHG 449

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K  + + +P +VE L G+ T + A G   + AV              GK+ +WG G  G
Sbjct: 450 DK--RSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKG 507

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L     K  A G   +  +  NGRV+  G    
Sbjct: 508 RLGHGDKEQKL---------VPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLY 558

Query: 268 DKMLFQEGNHARRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++     +  + P L+  +L   + EE+ CG YH  VLT+  E+YTWG   NG LG G 
Sbjct: 559 GQLGDVRAD-GKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGD 617

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           +   ++P  V+    E  V         V+CG   TAAI
Sbjct: 618 VMDRNTPTLVEA-LKEKQVKS-------VACGSGFTAAI 648



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 54/371 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           +ACG  H   +T+ G V+  G    G+LG   ++  +  P  +  L     + ++ G +H
Sbjct: 312 IACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVA-HPKLVEALATTNTEFVACGEYH 370

Query: 135 SSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           S A+T+ G+L+ WG   +S G LG G   +   P   +V   L GI     A G   +  
Sbjct: 371 SCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTP--KRVGGPLEGIRVSSVACGVWHTAL 428

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G++ ++G G  G LGHG + S+           P+ ++ L+G+K    A G  H+A
Sbjct: 429 VTSAGQLFTFGDGTFGVLGHGDKRSVA---------LPKEVESLKGLKTVRVACGVWHTA 479

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
            + E           +G+++ +GD   DK     G+  ++  P+ ++ L  Y+ ++V CG
Sbjct: 480 AVVEVMVGYSNAGGSSGKLFTWGDG--DKGRLGHGDKEQKLVPTCVAALVDYNFKQVACG 537

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              T  LT  G ++T GS+  G LG    D    P  V+G   E+ V++I       +CG
Sbjct: 538 HTLTVALTINGRVFTMGSSLYGQLGDVRADG-KLPGLVEGRLWEAFVEEI-------ACG 589

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A ++ + ++ TWG G +            G+LGHG+ +D   PT+V   +  +   
Sbjct: 590 AYHVAVLTAKTEVYTWGKGAN------------GRLGHGDVMDRNTPTLVEALKEKQVKS 637

Query: 416 VSCGFNHTGAL 426
           V+CG   T A+
Sbjct: 638 VACGSGFTAAI 648



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 127/292 (43%), Gaps = 29/292 (9%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           G++++WG++    +G G    K   + P  +E    +     A G   +  VT  G+V  
Sbjct: 275 GDVFLWGES----VGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFC 330

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG    GRLGHG +  +           P+L++ L     +  A G  HS  +  +G ++
Sbjct: 331 WGDESGGRLGHGVDVDVA---------HPKLVEALATTNTEFVACGEYHSCAVTLSGDLF 381

Query: 261 IFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGS 314
            +GD      L   GN      P  +   P        V CG +HT ++TS G+L+T+G 
Sbjct: 382 TWGDGTHSYGLLGHGNDISHWTPKRVGG-PLEGIRVSSVACGVWHTALVTSAGQLFTFGD 440

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
              G LG G    +  P+ V+       +  + T  V V+CG  HTAA+ E  +     G
Sbjct: 441 GTFGVLGHGDKRSVALPKEVES------LKGLKT--VRVACGVWHTAAVVEVMVGYSNAG 492

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GS G     G    G+LGHG+    + PT V    +    QV+CG   T AL
Sbjct: 493 GSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVAL 544



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 26/213 (12%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T    P+ ++    + V   A G  H+A + + G V+ +GD +  ++          P L
Sbjct: 293 TDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKL 352

Query: 284 ISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPF 338
           +  L  +  E V CG YH+C +T  G+L+TWG  ++  G LG G+ D+ H +P+RV GP 
Sbjct: 353 VEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGN-DISHWTPKRVGGPL 411

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                      +  V+CG  HTA + S G++ T+G     GTF        G LGHG+  
Sbjct: 412 E-------GIRVSSVACGVWHTALVTSAGQLFTFG----DGTF--------GVLGHGDKR 452

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
               P  V   + +K ++V+CG  HT A++E +
Sbjct: 453 SVALPKEVESLKGLKTVRVACGVWHTAAVVEVM 485


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 2176 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 2233

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 2234 GRLGIGGTESVSTPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 2291

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  VE L GI     A G   S  +T  G + SWG G  GRLGHG    
Sbjct: 2292 HGNRSP--CDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD--- 2346

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 2347 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2400

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 2401 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 2460

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 2461 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 2500

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 2501 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 2534



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 145/304 (47%), Gaps = 32/304 (10%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 1151 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 1210

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V P+P ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 1211 NGRLGLGISSGTV-PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 1269

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 1270 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 1320

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 1321 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1380

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG-GSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++  ++ W WG G  G   
Sbjct: 1381 EGCNVPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVV-WTWGRGDFGELR 1428

Query: 382  EDGH 385
             D H
Sbjct: 1429 PDSH 1432



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 209 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 267

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 268 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 325

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 326 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 436

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 437 SWGSNDQ 443



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  + GL
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYN-------SDTLG----PQLVQGL 195

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+++  +  HH  A+   GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 196 ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 251

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 252 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 299

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 359

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  VD 
Sbjct: 360 QDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD- 418

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 419 -------VAAGSTHCLALTEDSEVHSWG 439



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 224 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 282

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 283 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 341

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 342 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 399

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 400 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 169/379 (44%), Gaps = 58/379 (15%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 1189 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRH 1248

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 1249 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1306

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 1307 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 1357

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 1358 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1417

Query: 311  TWGSNENGCLGIGSIDV----LHSPERVQG--------PFS--ESPVDQICTSIVLVSCG 356
            TWG  + G L   S  V    +    RV+         PF    SP  ++   IV    G
Sbjct: 1418 TWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSP-REMGWEIV----G 1472

Query: 357  WKHTAAIS----------EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
             +  + IS          E ++  + WG       ++ H   GQ G+G       PT+V 
Sbjct: 1473 IERNSGISSFCGQQGERRERQLEVYAWG-------DNDH---GQQGNGTTTVNRKPTLVQ 1522

Query: 407  FGENVKALQVSCGFNHTGA 425
              E  K  +V+CG +H+ A
Sbjct: 1523 GLEGQKITRVACGSSHSVA 1541



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 129/298 (43%), Gaps = 37/298 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 1143 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1200

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPL--------PRQITALSNYVVKKVAVHSGGRHAMAL 1252

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 1253 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 1312

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 1313 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 1364

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             +WG     G F        G+LG G       P  +         Q+ CG   + AL
Sbjct: 1365 FSWG----DGDF--------GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 1410



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 2171 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2229

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 2230 YGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2289

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+++ L G++V   AAG  HSACI   G +Y +G     
Sbjct: 2290 LGHGNRSPC---------DRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYG 2340

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 2341 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2400

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 2401 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 2446

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 2447 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 2479



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 11/211 (5%)

Query: 2    LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
            L R +TA++ Y +K   K+    G  +  ++ T+  +  + WG GD G+LG  S  +  +
Sbjct: 1225 LPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDK 1279

Query: 62   PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
            P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+LG  +N    L+P  +  L
Sbjct: 1280 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 1338

Query: 122  K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
                V+Q++ G   +   A+T +G ++ WG    G+LG G   ++   +P  +E L+G  
Sbjct: 1339 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNVPQNIERLNGQG 1396

Query: 179  TKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
              Q   G + S+A+T  G V +WG G  G L
Sbjct: 1397 VCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 123/286 (43%), Gaps = 57/286 (19%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
            WG G+YGRLG G   ++ +P +      H +  +ACG   A TL LT+ G V++ G  DF
Sbjct: 1313 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1372

Query: 101  GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGK---------- 149
            G+LG   + G ++ P  I  L  + V QI  G   S A+T  G ++ WG+          
Sbjct: 1373 GKLGRGGSEGCNV-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDS 1431

Query: 150  ------NSNGQLGLGKKAAKVIPIP--------------TKVECLSGI--FTKQAALGFE 187
                  N + ++ +  K A +IP+P                +E  SGI  F  Q     E
Sbjct: 1432 HIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRE 1491

Query: 188  QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            + +      +V +WG    G+ G+G          +T    P L++ LEG K+   A G 
Sbjct: 1492 RQL------EVYAWGDNDHGQQGNGT---------TTVNRKPTLVQGLEGQKITRVACGS 1536

Query: 248  LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
             HS        V +    A + +LFQ    AR P   S L  S +V
Sbjct: 1537 SHSVAWTT---VDVAAPSAHEPVLFQT---ARDPLGASYLGVSSDV 1576



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 137/329 (41%), Gaps = 59/329 (17%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    V QI+        ++ +G +Y+   NS+  LG           P  V+ 
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSD-TLG-----------PQLVQG 194

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A+   G+V SWG G  GRLGHG    +           P++
Sbjct: 195 LASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPKM 245

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 246 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 305

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSE 340
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P   E++Q     
Sbjct: 306 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD---- 361

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV V CG + + A++ +G++ +WG G +             +LGHG +   
Sbjct: 362 -------LDIVKVRCGSQFSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHV 402

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +P ++   +  K + V+ G  H  AL E
Sbjct: 403 RYPKLLEGLQGKKVVDVAAGSTHCLALTE 431



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 34/236 (14%)

Query: 189  SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
            +++  G G +  WG    G+LG  + + +       +  T R ++ + G +   A     
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA----- 2218

Query: 249  HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLT 304
                +  +G++Y  G  A  ++          P+L+  + +       V  GG H   L+
Sbjct: 2219 ----VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALS 2274

Query: 305  SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            S GE+Y+WG  E+G LG G+      P  V+       VD        ++ G  H+A I+
Sbjct: 2275 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVD--------IAAGGAHSACIT 2326

Query: 365  -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
              G + +WG G              G+LGHG+  D + P +V   +  + + ++CG
Sbjct: 2327 VAGDLYSWGKG------------RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 2370



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 386 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 445

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++      +P  + GL  K +V I+ G   S A
Sbjct: 446 HFDTLRITKP-----QPSALPGLDTKHIVGIACGPAQSFA 480


>gi|162453643|ref|YP_001616010.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
 gi|161164225|emb|CAN95530.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
          Length = 1134

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 174/399 (43%), Gaps = 55/399 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG+G  GRLG GS   R  P   S        AL  G +HT  L  TG V   G   +G
Sbjct: 492 CWGSGANGRLGNGSTAGRTTPTPVSGLSD--AVALDAGESHTCALRATGAVVCWGEGQWG 549

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG + +   +  P+ +S L  + V +  G  H+ A+   G +  WG+ +NGQLG G   
Sbjct: 550 RLG-NGSTADATTPVTVSNL-TDAVDVDAGGGHTCALRATGAVVCWGRGTNGQLGNGISG 607

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  L+   +  A  G   ++  TGG   + WG G  G+LG+G  SS+    
Sbjct: 608 DQSAPV--TVFGLNDAISISAGWGHSCALRATGG--AVCWGRGNHGQLGNGSTSSV---- 659

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFL----------HSACIDENGRVYIFGDRAVDKML 271
                YTP  +  L    V I A+ F           H+  +  NG V  +G     ++ 
Sbjct: 660 -----YTPVEVPNLSDA-VAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLG 713

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           +   + +     +  L  +  V  G  HTC + S GE+  WG+ ++G +G GS      P
Sbjct: 714 YGAFSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQIGNGSAATALLP 773

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
                    +PV  +    V ++ G+ HT A+   G++  WG     G F        G+
Sbjct: 774 ---------APVVNL-GDAVEIAAGYAHTCALRRNGQVECWG----EGEF--------GR 811

Query: 391 LGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLE 428
           LG+G+  D   PT ++N      A  ++ G  HT ALL+
Sbjct: 812 LGNGSGADRTTPTPVLNL---TDAAHITAGTAHTCALLQ 847



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 167/413 (40%), Gaps = 77/413 (18%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG G +GRLG GS      PV  S         +  GG HT  L  TG V   G    G
Sbjct: 542 CWGEGQWGRLGNGSTADATTPVTVSNLTD--AVDVDAGGGHTCALRATGAVVCWGRGTNG 599

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   + G    P+ + GL  + + IS G+ HS A+   G    WG+ ++GQLG G  +
Sbjct: 600 QLGNGIS-GDQSAPVTVFGLN-DAISISAGWGHSCALRATGGAVCWGRGNHGQLGNGSTS 657

Query: 162 AKVIPIPTK-----VECLSGIFTKQAALG--FEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           +   P+        V   +  FT    L   F  + A+   G V  WG G  G+LG+G  
Sbjct: 658 SVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLGYGAF 717

Query: 215 SS------ILGF---------------LRSTSEYT--------------------PRLIK 233
           SS      +L                 +RST E                      P  + 
Sbjct: 718 SSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQIGNGSAATALLPAPVV 777

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
            L G  V+IAA G+ H+  +  NG+V  +G+    ++    G     P+ +  L  +  +
Sbjct: 778 NL-GDAVEIAA-GYAHTCALRRNGQVECWGEGEFGRLGNGSGADRTTPTPVLNLTDAAHI 835

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
             G  HTC L   G++  WG    G LG GS D  ++P  V G           T  V +
Sbjct: 836 TAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDRNTPVAVSG----------LTDAVAI 885

Query: 354 SCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           S G  HT A+ + G++  W            G+++ G+LG+G+  D   P  V
Sbjct: 886 SAGDAHTCAVRQNGQVSCW------------GYAALGRLGNGSTTDQTAPVTV 926



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 167/387 (43%), Gaps = 46/387 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
             WG G  G+LG G+  S    V     +    +A+A G +HT  +  TG +   G  D G
Sbjct: 703  CWGYGVDGQLGYGAFSSSEAGV--DVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSG 760

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            Q+G + +   +L P  +  L  + V+I+ GY H+ A+  +G++  WG+   G+LG G  A
Sbjct: 761  QIG-NGSAATALLPAPVVNLG-DAVEIAAGYAHTCALRRNGQVECWGEGEFGRLGNGSGA 818

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  P P     L+         G   + A+   G+V  WG G  GRLG+G +       
Sbjct: 819  DRTTPTPV----LNLTDAAHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDD----- 869

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  TP  +  L        +AG  H+  + +NG+V  +G  A+ ++          P
Sbjct: 870  ----RNTPVAVSGL--TDAVAISAGDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQTAP 923

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              +  +  +  V  GG HTC L + G +  WG   +G LG  S      P  V G  S++
Sbjct: 924  VTVLDIADAVAVAAGGEHTCALRASGAVSCWGGGGSGRLGNASTANSLRPVAVTG-LSDA 982

Query: 342  PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                     + ++ G  HT A+ S G +  WG G              G+LG+G      
Sbjct: 983  ---------IGLAAGRLHTCAVHSTGAVSCWGSG------------LDGRLGNGATTSAT 1021

Query: 401  HPTIVN-FGENVKALQVSCGFNHTGAL 426
             P  V+  G+   ALQVS G +HT A+
Sbjct: 1022 IPIPVSGLGD---ALQVSAGTSHTCAI 1045



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 158/375 (42%), Gaps = 38/375 (10%)

Query: 7    TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVV 64
            +A T       + LG  + I   +  +   RR   +  WG G++GRLG GS   R  P  
Sbjct: 766  SAATALLPAPVVNLGDAVEIAAGYAHTCALRRNGQVECWGEGEFGRLGNGSGADRTTPT- 824

Query: 65   CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
                       +  G AHT  L ++G V   G   +G+LG       +  P+ +SGL  +
Sbjct: 825  -PVLNLTDAAHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDRNT-PVAVSGLT-D 881

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
             V IS G  H+ A+  +G++  WG  + G+LG G    +  P+      L        A 
Sbjct: 882  AVAISAGDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQTAPVTV----LDIADAVAVAA 937

Query: 185  GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA- 243
            G E + A+   G V  WG GGSGRLG+   +S    LR  +         + G+   I  
Sbjct: 938  GGEHTCALRASGAVSCWGGGGSGRLGN---ASTANSLRPVA---------VTGLSDAIGL 985

Query: 244  AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            AAG LH+  +   G V  +G     ++       A  P  +S L  + +V  G  HTC +
Sbjct: 986  AAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATIPIPVSGLGDALQVSAGTSHTCAI 1045

Query: 304  TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV-----SCGWK 358
            T+ G  + WG   +G LG GS+    +P          PV  +  ++++      S G  
Sbjct: 1046 TAPGGAFCWGLGTSGELGDGSMATALTP---------VPVANVADAVMISAGRRNSVGAS 1096

Query: 359  HTAAISE-GKILTWG 372
            HT  +   G +  WG
Sbjct: 1097 HTVVLRRTGSVAAWG 1111



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 129/305 (42%), Gaps = 28/305 (9%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKA--------LACGGAHTLFLTETG 90
           A  WG G++G+LG GS  S + PV V +  +  +++A        L     HT  L   G
Sbjct: 640 AVCWGRGNHGQLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNG 699

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
            V   G    GQLG      +S     +  L   +   ++ G  H+ A+   GE+  WG 
Sbjct: 700 TVRCWGYGVDGQLGYGA---FSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGA 756

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +GQ+G G  A  ++P P     ++     + A G+  + A+   G+V  WG G  GRL
Sbjct: 757 ADSGQIGNGSAATALLPAPV----VNLGDAVEIAAGYAHTCALRRNGQVECWGEGEFGRL 812

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G+G  +            TP  +  L         AG  H+  + ++G+V  +G+ A  +
Sbjct: 813 GNGSGA---------DRTTPTPVLNL--TDAAHITAGTAHTCALLQSGQVRCWGEGAYGR 861

Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +     +    P  +S L  +  +  G  HTC +   G++  WG    G LG GS     
Sbjct: 862 LGNGSQDDRNTPVAVSGLTDAVAISAGDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQT 921

Query: 330 SPERV 334
           +P  V
Sbjct: 922 APVTV 926



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 45/304 (14%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK--AAKVIPIPTKVECLS 175
           + G   E   IS    ++ A+ V G++  WG N NG+LG G      +  P+    + ++
Sbjct: 415 VEGGACEKDPISANQRNTCAV-VGGKVDCWGNNENGELGDGTTMTTGRATPVSNLNDAVA 473

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                   +G   + A+   G V+ WG+G +GRLG+G          +    TP  +  L
Sbjct: 474 ------VGVGRFHACALRATGAVVCWGSGANGRLGNGS---------TAGRTTPTPVSGL 518

Query: 236 -EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            + V +    AG  H+  +   G V  +G+    ++       A  P  +S L  + +V 
Sbjct: 519 SDAVALD---AGESHTCALRATGAVVCWGEGQWGRLGNGSTADATTPVTVSNLTDAVDVD 575

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            GG HTC L + G +  WG   NG LG G      +P  V G              + +S
Sbjct: 576 AGGGHTCALRATGAVVCWGRGTNGQLGNGISGDQSAPVTVFG----------LNDAISIS 625

Query: 355 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
            GW H+ A+ + G  + WG  G+H           GQLG+G+      P  V    +  A
Sbjct: 626 AGWGHSCALRATGGAVCWGR-GNH-----------GQLGNGSTSSVYTPVEVPNLSDAVA 673

Query: 414 LQVS 417
           ++ S
Sbjct: 674 IEAS 677



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 146/373 (39%), Gaps = 63/373 (16%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G N+ G+LG    +  +     +S L  + V +  G  H+ A+   G +  WG  +NG+L
Sbjct: 444 GNNENGELGDGTTM-TTGRATPVSNLN-DAVAVGVGRFHACALRATGAVVCWGSGANGRL 501

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G  A +  P P  V  LS      A  G   + A+   G V+ WG G  GRLG+G   
Sbjct: 502 GNGSTAGRTTPTP--VSGLSDAVALDA--GESHTCALRATGAVVCWGEGQWGRLGNGS-- 555

Query: 216 SILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  +    TP  +  L + V V    AG  H+  +   G V  +G     ++    
Sbjct: 556 -------TADATTPVTVSNLTDAVDVD---AGGGHTCALRATGAVVCWGRGTNGQLGNGI 605

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                 P  +  L  +  +  G  H+C L + G    WG   +G LG GS   +++P  V
Sbjct: 606 SGDQSAPVTVFGLNDAISISAGWGHSCALRATGGAVCWGRGNHGQLGNGSTSSVYTPVEV 665

Query: 335 QGPFSESPVDQIC-TSIVLVSCGWKHTAAI-SEGKILTWGWGGS----HGTFSED----- 383
                   ++    T+   +   + HT A+   G +  WG+G      +G FS       
Sbjct: 666 PNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLGYGAFSSSEAGVD 725

Query: 384 -----------------------------GHSSGGQLGHGNDVDYIHPT-IVNFGENVKA 413
                                        G +  GQ+G+G+    + P  +VN G+   A
Sbjct: 726 VLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQIGNGSAATALLPAPVVNLGD---A 782

Query: 414 LQVSCGFNHTGAL 426
           ++++ G+ HT AL
Sbjct: 783 VEIAAGYAHTCAL 795



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 6/160 (3%)

Query: 55   SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            S  +  RPV  +         LA G  HT  +  TG V   G    G+LG       ++ 
Sbjct: 966  STANSLRPVAVTGLSD--AIGLAAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATI- 1022

Query: 115  PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
            P+ +SGL  + +Q+S G  H+ AIT  G  + WG  ++G+LG G  A  + P+P      
Sbjct: 1023 PIPVSGLG-DALQVSAGTSHTCAITAPGGAFCWGLGTSGELGDGSMATALTPVPVANVAD 1081

Query: 175  SGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            + + +  ++ ++G   +V +   G V +WGA G GRLG+G
Sbjct: 1082 AVMISAGRRNSVGASHTVVLRRTGSVAAWGAVGVGRLGNG 1121



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 118/343 (34%), Gaps = 113/343 (32%)

Query: 35   LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
            LQ      WG G YGRLG GS + R  PV  S        A++ G AHT  + + G V  
Sbjct: 846  LQSGQVRCWGEGAYGRLGNGSQDDRNTPVAVSGLTD--AVAISAGDAHTCAVRQNGQVSC 903

Query: 95   TGLNDFGQLG-------------------------------------------------I 105
             G    G+LG                                                  
Sbjct: 904  WGYAALGRLGNGSTTDQTAPVTVLDIADAVAVAAGGEHTCALRASGAVSCWGGGGSGRLG 963

Query: 106  SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
            + +   SL P+ ++GL  + + ++ G  H+ A+   G +  WG   +G+LG G   +  I
Sbjct: 964  NASTANSLRPVAVTGLS-DAIGLAAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATI 1022

Query: 166  PIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            PIP     +SG+    Q + G   + A+T  G    WG G SG LG G  ++ L      
Sbjct: 1023 PIP-----VSGLGDALQVSAGTSHTCAITAPGGAFCWGLGTSGELGDGSMATAL------ 1071

Query: 225  SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
               TP  +  +                                D ++   G   RR S+ 
Sbjct: 1072 ---TPVPVANV-------------------------------ADAVMISAG---RRNSV- 1093

Query: 285  SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
                       G  HT VL   G +  WG+   G LG GS  V
Sbjct: 1094 -----------GASHTVVLRRTGSVAAWGAVGVGRLGNGSPKV 1125


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 14/240 (5%)

Query: 26  ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           IC   +++  +      WG G +GRLG    E+   P      +      +ACG  HTL 
Sbjct: 110 ICDGHMAAVTEDGSVWTWGRGTFGRLGHEVHETGI-PEKVPGLDGMRFVKVACGHVHTLA 168

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL 144
           LT+ G V+A G N  G +G+S+    +  P  I  L+ K+++ IS G   S+A++ + E+
Sbjct: 169 LTDDGRVFAWGNNKTGCVGVSDR--GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEV 226

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y WG ++ GQLGLG + A+ I  PT++  L  +   Q A G    +A++  G+V +WG G
Sbjct: 227 YTWGADNYGQLGLG-QGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+  +          +      P +I  L+  +VK+ AAG  HSA +D+ GR++  G+
Sbjct: 286 LQGQTAN---------EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 22/285 (7%)

Query: 42  LW--GNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           LW  G GD  +LG G        V    V  AF+  S+   +    H   +TE G V+  
Sbjct: 68  LWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTW 127

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G   FG+LG    +  +  P ++ GL     V+++ G+ H+ A+T DG ++ WG N  G 
Sbjct: 128 GRGTFGRLG--HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGC 185

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           +G+  +       P ++E L G      + G E S A++   +V +WGA   G+LG GQ 
Sbjct: 186 VGVSDRGTCA---PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQG 242

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           +  +          P  I+ L  V +   A G  H   +   G VY +G     +   ++
Sbjct: 243 ARYIS--------QPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEK 294

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
                 P +I  L  S  + +  GG H+ V+   G L+T G  E+
Sbjct: 295 KVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGEEED 339



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 24/285 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G +G+LG+G+      P +    +       A G   T  +T+ G ++  G  D  Q
Sbjct: 19  WGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQGDSNQ 78

Query: 103 LGISENIGYSLEPL------RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LG  +    S + L         GL   VV  S    H +A+T DG ++ WG+ + G+LG
Sbjct: 79  LGHGDTGDCSNQVLPREVEDAFDGLS--VVNCSICDGHMAAVTEDGSVWTWGRGTFGRLG 136

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                     IP KV  L G+   + A G   ++A+T  G+V +WG   +G +G      
Sbjct: 137 ---HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVG------ 187

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG 275
               +       P+ I+ L G K+   +AG   SA +     VY +G     ++ L Q  
Sbjct: 188 ----VSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGA 243

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +  +P+ I  L      ++ CG YH   L++ GE+Y WG    G
Sbjct: 244 RYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQG 288



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 41/293 (13%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G LY WG    GQLG+G +  + +P   K   +        A G   + A+T GG + ++
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKE--IDNEICTFTAAGANTTAAITQGGVLWTF 71

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVY 260
           G G S +LGHG           +++  PR +++  +G+ V   +    H A + E+G V+
Sbjct: 72  GQGDSNQLGHGDTGDC------SNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSN 315
            +G     ++    G+      +  K+P  +     +V CG  HT  LT  G ++ WG+N
Sbjct: 126 TWGRGTFGRL----GHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNN 181

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
           + GC+G+       +P+ ++    +  +D        +S G + +AA+S E ++ TW   
Sbjct: 182 KTGCVGVSDRGTC-APQEIESLRGKKIID--------ISAGMESSAALSAEHEVYTW--- 229

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGAL 426
                    G  + GQLG G    YI  PT +    NV  +Q++CG  H  AL
Sbjct: 230 ---------GADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLAL 273



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 45/349 (12%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYM 146
           E G +Y  G   FGQLGI      SL P     +  E+   +    +++A     G L+ 
Sbjct: 12  EGGYLYTWGSGQFGQLGIGTQNDESL-PQIAKEIDNEICTFTAAGANTTAAITQGGVLWT 70

Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +G+  + QLG G     + +V+P   + +   G+     ++      AVT  G V +WG 
Sbjct: 71  FGQGDSNQLGHGDTGDCSNQVLPREVE-DAFDGLSVVNCSICDGHMAAVTEDGSVWTWGR 129

Query: 204 GGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           G  GRLGH   E+ I           P  +  L+G++    A G +H+  + ++GRV+ +
Sbjct: 130 GTFGRLGHEVHETGI-----------PEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAW 178

Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           G+     + +   G  A  P  I  L   +  ++  G   +  L++  E+YTWG++  G 
Sbjct: 179 GNNKTGCVGVSDRGTCA--PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQ 236

Query: 320 LGIGS-IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
           LG+G     +  P R++      P       IV ++CG  H  A+S  G++  WG G   
Sbjct: 237 LGLGQGARYISQPTRIR-TLRNVP-------IVQIACGQYHMLALSAAGEVYAWGQGLQ- 287

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                      GQ  +   VD   P +++  +  +   ++ G +H+  +
Sbjct: 288 -----------GQTANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVV 325


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 171/377 (45%), Gaps = 61/377 (16%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACG  HT  +T  G V++ G    G+LG  +  ++ +   P  I  L    VQ ++
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAH---PQLIDSLASSTVQYVA 181

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
            G +HS A+T  G+LY WG  ++  G LG G   +   P       L G+     A G  
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGP-LEGVRVSSVACGPW 240

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +V VT  G++ S+G G  G LGHG   S            PR ++ L+G+K   AA G 
Sbjct: 241 HTVLVTSTGQLFSFGDGTFGVLGHGDRKSA---------SMPREVESLKGLKTLRAACGP 291

Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
            H+A + E            +G+++ +GD   +++   +      P+ ++ L      +V
Sbjct: 292 WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQICTSI 350
            CG   T  LT+ G LYT GS   G LG         P+   R+ G           T I
Sbjct: 352 ACGHSLTVALTTTGHLYTMGSVSYGQLG--------DPQATGRLPGVLRLGR-----TLI 398

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
             VSCG  H AA+ S+G + TWG G +            G+LGHG+  D   PT+V    
Sbjct: 399 EEVSCGAYHVAALTSKGDVCTWGKGAN------------GRLGHGDAEDRDVPTLVEALR 446

Query: 410 NVKALQVSCGFNHTGAL 426
           + +  +VSCG + T A+
Sbjct: 447 DKQVKKVSCGSSFTSAI 463



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 133/309 (43%), Gaps = 52/309 (16%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           V GEL+MWG+   G  G+ KK          +P  V  L  +  +Q A G   +  VT  
Sbjct: 83  VFGELWMWGEGI-GDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTRQ 141

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    GRLGHG ++ +           P+LI  L    V+  A G  HS  + +
Sbjct: 142 GEVFSWGEESGGRLGHGVDADVA---------HPQLIDSLASSTVQYVACGEYHSCAVTQ 192

Query: 256 NGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
           +G +Y +GD   +  L   GN       +R     +      V CG +HT ++TS G+L+
Sbjct: 193 SGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLF 252

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE----- 365
           ++G    G LG G       P  V+       +  + T  +  +CG  HTAA+ E     
Sbjct: 253 SFGDGTFGVLGHGDRKSASMPREVES------LKGLKT--LRAACGPWHTAAVVEVMSRY 304

Query: 366 --------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
                   GK+ TWG G  +            +LGHG+    + PT V    +    QV+
Sbjct: 305 SNAGSSLSGKLFTWGDGDKN------------RLGHGDKEQKLVPTCVAALVDHNFRQVA 352

Query: 418 CGFNHTGAL 426
           CG + T AL
Sbjct: 353 CGHSLTVAL 361



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 28/240 (11%)

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G++  WG G    +G G  +  L     T  + PR ++ L  + V+  A G  H+A +  
Sbjct: 85  GELWMWGEG----IGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTR 140

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
            G V+ +G+ +  ++          P LI  L  S  + V CG YH+C +T  G+LYTWG
Sbjct: 141 QGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWG 200

Query: 314 --SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
             ++  G LG G+     +P+RV GP            +  V+CG  HT  + S G++ +
Sbjct: 201 DGTHNFGLLGHGNSISHWTPKRVGGPLEG-------VRVSSVACGPWHTVLVTSTGQLFS 253

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           +G     GTF        G LGHG+      P  V   + +K L+ +CG  HT A++E +
Sbjct: 254 FG----DGTF--------GVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVM 301



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 4/150 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG G  E +  P   +A   H+ + +ACG + T+ LT TG +Y  G   +GQ
Sbjct: 318 WGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQ 377

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +  G     LR+   +  + ++S G +H +A+T  G++  WGK +NG+LG G   A
Sbjct: 378 LGDPQATGRLPGVLRLG--RTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGD--A 433

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +   +PT VE L     K+ + G   + A+
Sbjct: 434 EDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463


>gi|330836304|ref|YP_004410945.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329748207|gb|AEC01563.1| Listeria/Bacterioides repeat-containing protein [Sphaerochaeta
           coccoides DSM 17374]
          Length = 786

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 168/364 (46%), Gaps = 40/364 (10%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           +K+++ G  HT+ L   G ++ATG N  GQLG+ +N   S  P+++S +  +V  +S G 
Sbjct: 414 IKSVSAGYYHTMILKTDGTLWATGENKAGQLGVGDNTDRS-TPVQVSSMGSDVAAVSAGE 472

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI-PIPTKVECLSGIFTKQAALGFEQSVA 191
            H+  +  DG L+  G+N  GQLGLG   + +    P +V  + G      + G   ++ 
Sbjct: 473 KHTMILKKDGTLWATGENKYGQLGLGDSDSGIDKSTPMQVSSM-GSDVAAVSTGASHTMI 531

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +   G + + G    G+LG G  SS       T   TP  +  + G  V+  +AG  H+ 
Sbjct: 532 LKKNGTLWATGQNNDGQLGLGDSSS------GTDRSTPVQVLAM-GSDVEAVSAGSYHTM 584

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR--------RPSLISKLPYSEEVVCGGYHTCVL 303
            + ++G ++  G R  D  L      +R         P+    +   + V  GG+HT +L
Sbjct: 585 ILKKDGTLWATG-RNYDGQLGDGTTTSRTTPVQVKASPTFGDFMTNVKAVSAGGFHTMIL 643

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
              G L+  G N+ G LG G+  + +   +P +V+    +S      T +V VS G  +T
Sbjct: 644 KKDGTLWVTGRNQYGQLGDGTSGITNNKSTPVQVR----DSSGVGFMTDVVAVSAGLHYT 699

Query: 361 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCG 419
             + +            GT    G ++ GQLG GN  D   P  V F G +V A  VS G
Sbjct: 700 IILKK-----------DGTLWATGRNNFGQLGVGNKTDRKTPVKVAFMGTDVAA--VSAG 746

Query: 420 FNHT 423
           +NHT
Sbjct: 747 YNHT 750



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 56/388 (14%)

Query: 42  LWGNGD--YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           LW  G+   G+LG+G    R  PV  S+     + A++ G  HT+ L + G ++ATG N 
Sbjct: 433 LWATGENKAGQLGVGDNTDRSTPVQVSSM-GSDVAAVSAGEKHTMILKKDGTLWATGENK 491

Query: 100 FGQLGISEN---IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           +GQLG+ ++   I  S  P+++S +  +V  +STG  H+  +  +G L+  G+N++GQLG
Sbjct: 492 YGQLGLGDSDSGIDKS-TPMQVSSMGSDVAAVSTGASHTMILKKNGTLWATGQNNDGQLG 550

Query: 157 LGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           LG  ++      T V+ L+ G   +  + G   ++ +   G + + G    G+LG G   
Sbjct: 551 LGDSSSGT-DRSTPVQVLAMGSDVEAVSAGSYHTMILKKDGTLWATGRNYDGQLGDGT-- 607

Query: 216 SILGFLRSTSEYTPRLIKELEG-----VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
                  +TS  TP  +K           VK  +AG  H+  + ++G +++ G     ++
Sbjct: 608 -------TTSRTTPVQVKASPTFGDFMTNVKAVSAGGFHTMILKKDGTLWVTGRNQYGQL 660

Query: 271 LFQEG-----NHARRPSLI---SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
              +G     N+   P  +   S + +  +VV    G ++T +L   G L+  G N  G 
Sbjct: 661 --GDGTSGITNNKSTPVQVRDSSGVGFMTDVVAVSAGLHYTIILKKDGTLWATGRNNFGQ 718

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
           LG+G+     +P +V           + T +  VS G+ HT    +            G+
Sbjct: 719 LGVGNKTDRKTPVKVA---------FMGTDVAAVSAGYNHTLIQKK-----------DGS 758

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
               G ++ GQLG  ++ +   P  V F
Sbjct: 759 LWATGFNTNGQLGVSDNTNRSTPEQVVF 786


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 146/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 37/256 (14%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVK 239
           QAA G   S+ +    +VLS G    G+LG  G +   L          P  I+ LE + 
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL----------PEPIQALETLI 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCG 296
           V + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V CG
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCG 136

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
            YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ Q       V+ 
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ-------VAA 188

Query: 356 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVK 412
           G  H+ A+S     ++GWG           +S GQL   G    V    P  V   +N+ 
Sbjct: 189 GGAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 413 ALQVSCGFNHTGALLE 428
            + +SCG  HT  L +
Sbjct: 238 VVYISCGDAHTAVLTQ 253



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++        ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT------LNDI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  I+ L    
Sbjct: 199 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------APVIVEKDR 309

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 310 I---IEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G              V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVA-------VNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  +   + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD 274



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVAVN--IACGQMCSMAVVNTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P R+   QG             +  V+CG+ HT  ++ 
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRIAALQG-----------IRVQRVACGYAHTLVLTD 274

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG++  WG             +S GQLG GN  +  +P  V   ++      +C   HT 
Sbjct: 275 EGQVYAWG------------ANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTS 322

Query: 425 A 425
           A
Sbjct: 323 A 323



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357


>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_b [Mus musculus]
          Length = 563

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 86  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 145

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 146 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 203

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 204 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 254

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
           TP  +  L G+ V     G+ H+  + + G +Y +G     ++     N+   P+  ++ 
Sbjct: 255 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 314

Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           K    E   C   HT    T GG +Y WG
Sbjct: 315 KERVIEIAACHSTHTSAAKTQGGHVYMWG 343



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 131 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 190

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 191 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 249

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 250 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 307

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 308 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 343



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 65  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 115

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 116 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 175

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GEL+ WG N  G +G GS     +P +V        V       V ++CG   + A+
Sbjct: 176 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV-------VNIACGQTSSMAV 228

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ H
Sbjct: 229 LDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAH 276

Query: 423 TGALLE 428
           T AL +
Sbjct: 277 TLALTD 282



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 237 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 296

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 297 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 348

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 349 -SVILPHLTHFCCTDDVF 365


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 154/344 (44%), Gaps = 44/344 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
           WG    GRLG G       P +   F   +++   CG  HT  +T +G +YA G  D   
Sbjct: 320 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 379

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG+     +  +P+RI G  +   V  IS G  H++ +T +G+L+ +G  + G LG G
Sbjct: 380 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 438

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
            + +    IP +VE L+G  T +AA G   S AV       T  GK+ +WG G  GRLGH
Sbjct: 439 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 496

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
           G     L          P  + EL+    +  A G   +  +  +G+VY  G  D + D 
Sbjct: 497 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 547

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +        R PS I       + +EV CG +H  VL S  E+YTWG   NG LG G  +
Sbjct: 548 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 599

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
               P  V+    +         +  V CG  +TA I   K +T
Sbjct: 600 YRCMPTLVKALKGK--------QVRKVVCGSNYTATICLHKPIT 635



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P V  +      ++++CG  + + +T+ G +Y+ G    G+LG      Y   P  I   
Sbjct: 287 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEF 345

Query: 122 KKEVVQIST-GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
               V+++  G  H+ A+T  G+LY WG   ++ G LGLG  A+   P+    + + GI+
Sbjct: 346 NGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIY 404

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            K  + G   +  VT  GK+ ++G G  G LGHG            S   PR ++ L G 
Sbjct: 405 VKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGC 455

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARR----------PSLISK 286
           +   AA G  HSA +     V +FG+      LF   +G+  R           PS +++
Sbjct: 456 RTIKAACGVWHSAAV-----VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTE 510

Query: 287 LPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           L  +  ++V CG   T  L+  G++Y  G+ +       S D++ +P  ++G   +S V 
Sbjct: 511 LDTTSFQQVACGQSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQ 564

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
           +       V+CG+ H A + S+ ++ TWG G            S GQLGHG+      PT
Sbjct: 565 E-------VACGFHHIAVLNSKAEVYTWGKG------------SNGQLGHGDTEYRCMPT 605

Query: 404 IVNFGENVKALQVSCGFNHTGAL 426
           +V   +  +  +V CG N+T  +
Sbjct: 606 LVKALKGKQVRKVVCGSNYTATI 628



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 123/273 (45%), Gaps = 42/273 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  ++    +  +  + G   +V VT  G++ SWG    GRLGHG  S +         
Sbjct: 286 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 338

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
             P+LI E  G  V++A  G  H+  +  +G +Y +GD   +  L   G   +H +   +
Sbjct: 339 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 396

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + ++   Y + + CG +HT  +TS G+L+T+G    G LG G     + P  V+      
Sbjct: 397 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNG-- 454

Query: 342 PVDQICTSIVLVSCGWKHTAAI--------SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                C +I   +CG  H+AA+        S GK+ TWG G              G+LGH
Sbjct: 455 -----CRTIK-AACGVWHSAAVVSVFGEATSSGKLFTWGDG------------DDGRLGH 496

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+    + P+ V   +     QV+CG + T AL
Sbjct: 497 GDIECRLIPSCVTELDTTSFQQVACGQSITVAL 529



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 25/236 (10%)

Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           V  WG   G G LG G   S       T  + P+++K    +  +  + G  ++  + + 
Sbjct: 255 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 314

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           G++Y +G+ +  ++     ++   P LI +   S  E   CG +HTC +T+ G+LY WG 
Sbjct: 315 GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGD 374

Query: 315 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
            ++  G LG+GS      P R+ G      V  I       SCG  HTA + SEGK+ T+
Sbjct: 375 GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAI-------SCGPWHTAFVTSEGKLFTF 427

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           G     GTF        G LGHG+ +    P  V      + ++ +CG  H+ A++
Sbjct: 428 G----DGTF--------GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 471


>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 445

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 149/316 (47%), Gaps = 49/316 (15%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
           + IS G  HS  +T+DG+L++WGK   G+LG G++ +  +P       L+ +F + +   
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 156

Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            ALG   SVA+T  G V +WG GG G LGH            T E  PR +      K+ 
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRCVDGSWDCKIS 207

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEV 293
             A    H+A I E+G +Y++G    D            EG     PS +  L      V
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLV 353
            CGG+ T  LT  G+L+ WG+N N  LG G  D L   E +  P  +S        I  +
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPLPVPSLDS------VRITQI 319

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 412
           +CG  H+ A++ EGK+L+WG GG             GQLG+ +  +   PT +    + K
Sbjct: 320 ACGGYHSLALTKEGKVLSWGHGGH------------GQLGNSSLRNQKIPTEIEALADKK 367

Query: 413 ALQVSCGFNHTGALLE 428
            + ++CG + + A+ +
Sbjct: 368 IVFIACGGSSSAAITD 383



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 154/327 (47%), Gaps = 22/327 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G   S + P +   FE+HS++ +A GG H++ LT  G V+  G   FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182

Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +     L P  + G    ++  I+T   H++AIT  GELYMWG+           
Sbjct: 183 ALG-HKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241

Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + +P+KV+ L+      +  GF  ++A+T  G++ +WGA  +  LG G   
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +   + P  +  L+ V++   A G  HS  + + G+V  +G     ++     
Sbjct: 299 -------NLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSL 351

Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
            + + P+ I  L   + V   CGG  +  +T GGEL+ WG+ ++  LG+ G  ++  +P 
Sbjct: 352 RNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKH 359
            V   F     ++    ++ VS G  H
Sbjct: 412 EVN--FLTEEDERQPHKVISVSIGASH 436


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG  +
Sbjct: 69  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 128

Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
            N G  L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A + 
Sbjct: 129 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 185

Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S
Sbjct: 186 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 235

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
            ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +   
Sbjct: 236 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 293

Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P ++ K    E   C   HT    T GG +Y WG      + +  +    S + V   F
Sbjct: 294 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 353

Query: 339 SESPV 343
           +   V
Sbjct: 354 ATPAV 358



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 34/300 (11%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
           L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +
Sbjct: 52  LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 110

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           GE++ WG N+  QLG G   A ++P       LS     + A G   S+ +T  G+V +W
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 169

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
           G   SG++G G          + ++  PR +      KV +  A G + S  +   G V+
Sbjct: 170 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 220

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++G     ++      +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280

Query: 319 CLGIGSIDVLHSPERVQGPFSESPV----DQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            LG G+      P         +PV    D+I   I + +C   HT+A     G +  WG
Sbjct: 281 QLGTGNKSNQSYP---------TPVVVEKDRI---IEIAACHSAHTSAAKTQGGHVYMWG 328



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   +  +ACG   ++ +  TG V+  G N  G
Sbjct: 169 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 228

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 229 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 287

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
           + +  P P  VE    I    A      S A T GG V  WG   G S  L H
Sbjct: 288 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 339



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 55  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 110

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  ++ L     ++  + + + E+        A G  HS  +  
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV--------ACGSYHSLVLTS 162

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L SK+  +  + CG   +  + + GE
Sbjct: 163 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQSKVVVN--IACGQMCSMAVVNTGE 218

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           ++ WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 219 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 267

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG++  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 268 EGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 315

Query: 425 A 425
           A
Sbjct: 316 A 316



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 73  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 130

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    +++V+   CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 131 AGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 190

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G   +S V      +V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 191 VTGCL-QSKV------VVNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLG 231

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 232 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 267



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 281 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 329


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3938 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3995

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3996 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4054 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4108

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4109 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4222

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4223 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4262

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4263 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4296



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2941 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3000

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GK+ SWG G  G+L
Sbjct: 3001 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3059

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3060 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3111 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3170

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3171 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3215

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3216 --------RLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3254



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2979 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3038

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3039 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3096

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3097 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3147

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3148 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3207

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3208 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3259

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3260 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 148/327 (45%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G +++ G  D 
Sbjct: 2997 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3056

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3057 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3115

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3116 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3169

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3170 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3224

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3225 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3284

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3285 GLEGQ--------KITRVACGSSHSVA 3303



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3051 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3111 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3169 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3225

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3226 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3274

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3275 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3306



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 481 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 539

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 597

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 708

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 709 SWGSNDQ 715



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 467

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 468 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG 523

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 571

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 632 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 690

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 691 -------VAAGSTHCLALTEDSEVHSWG 711



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 496 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 555 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 613

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 671

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 672 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722

Query: 271 LFQEGNHARRPSLISK 286
              +   A  P L +K
Sbjct: 723 RITKPEPAALPGLDTK 738



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2933 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2990

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3042

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+++ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3043 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3102

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3103 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3154

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3155 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3196

Query: 423  TGAL 426
            + AL
Sbjct: 3197 SLAL 3200



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3933 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3991

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3992 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4051

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G     
Sbjct: 4052 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4102

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4103 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4163 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4208

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4209 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4241



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 138/329 (41%), Gaps = 59/329 (17%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    VVQI+        ++ +G +Y    NS+  LG           P  V+ 
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG-----------PQLVQS 466

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A++  G+V SWG G  GRLGHG    +           P+L
Sbjct: 467 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKL 517

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 518 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 577

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSE 340
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P   E++Q     
Sbjct: 578 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD---- 633

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV V CG + + A++ +G++ TWG G +             +LGHG +   
Sbjct: 634 -------LDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ------------RLGHGTEEHV 674

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +P ++   +  K + V+ G  H  AL E
Sbjct: 675 RYPKLLEGLKGKKVIDVAAGSTHCLALTE 703



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A          
Sbjct: 3931 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA------- 3983

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3984 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4041

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G +
Sbjct: 4042 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------IAAGGAHSACITAAGDL 4093

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V   +  + + ++CG
Sbjct: 4094 FTWGKG------------RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4132


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 175 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDR 285

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 286 I---IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 38  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 88

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+ VLTS GE
Sbjct: 89  LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G GS      P RV G      V  I       +CG   + A+ + G+
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI-------ACGQMCSMAVVDTGE 201

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 202 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 249

Query: 428 E 428
           +
Sbjct: 250 D 250



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 250

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG+I  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 251 EGQIYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 298

Query: 425 A 425
           A
Sbjct: 299 A 299



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHHTHFCCTDDVF 333


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 19/267 (7%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
             AL+ G  H   +T+TG VY  G   +GQLG  +++   + P  +  +K EV  +S G+
Sbjct: 275 FSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVD-KIIPQPVPRIKGEVKSVSAGF 333

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +H+ A+T  G L+ WG    G+LG    A ++IP         G+    A  G   ++ +
Sbjct: 334 YHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVL 393

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G+V S+G+G SGRLGHG ++          +++P  +  LE  +    AAGF HS  
Sbjct: 394 NRRGQVFSFGSGDSGRLGHGNDN---------DQWSPTFLSALESERCVSIAAGFAHSVA 444

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGE 308
           + + G++Y +G   + ++     +    P  ++ + +       V  G  HTC+  S G 
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGS 504

Query: 309 LYTWGSNENGCLGIGS-----IDVLHS 330
           L T G   +G +  GS     +D LH+
Sbjct: 505 LITLGRVSHGRMAEGSCAQDMLDTLHT 531



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 39/241 (16%)

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           AVT  G V +WG G  G+LGHG +           +  P+ +  ++G +VK  +AGF H+
Sbjct: 287 AVTDTGLVYTWGQGRYGQLGHGDD---------VDKIIPQPVPRIKG-EVKSVSAGFYHT 336

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYSEEVVCGGYHTCVLTS 305
             +  +G ++ +GD    K+   +      P+L++      +P +     GG HT VL  
Sbjct: 337 VAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAA-AQAGGSHTLVLNR 395

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G+++++GS ++G LG G+ +   SP  +    SE      C SI   + G+ H+ A+++
Sbjct: 396 RGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESER-----CVSI---AAGFAHSVALTD 447

Query: 366 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNH 422
            G+I TWG G              G+LGHG+D D + P  +     + +KA+ V+ G  H
Sbjct: 448 QGQIYTWGCG------------KLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAH 495

Query: 423 T 423
           T
Sbjct: 496 T 496



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 18/226 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG+LG G    +  P       K  +K+++ G  HT+ +T  G ++  G    G+
Sbjct: 297 WGQGRYGQLGHGDDVDKIIPQPVPRI-KGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGK 355

Query: 103 LGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG ++N    L P  ++   +    V     G  H+  +   G+++ +G   +G+LG G 
Sbjct: 356 LGHNDN-AQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGN 414

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    PT +  L        A GF  SVA+T  G++ +WG G  GRLGHG +S    
Sbjct: 415 DNDQW--SPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDS---- 468

Query: 220 FLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 E  PR +  +  + +K    AAG  H+      G +   G
Sbjct: 469 -----DEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLG 509



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 4/126 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+GD GRLG G+   +W P   SA E     ++A G AH++ LT+ G +Y  G    G+
Sbjct: 402 FGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGR 461

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   +    L P +++ +  + ++   ++ G  H+     +G L   G+ S+G++  G 
Sbjct: 462 LGHGSDSDEVL-PRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGS 520

Query: 160 KAAKVI 165
            A  ++
Sbjct: 521 CAQDML 526



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 40/192 (20%)

Query: 249 HSACIDENGRVYIFGD---------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           H A + + G VY +G            VDK++ Q       P +  ++   + V  G YH
Sbjct: 284 HCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQP-----VPRIKGEV---KSVSAGFYH 335

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE--SPVDQICTSIVLVSCGW 357
           T  +T  G L+TWG  + G LG         P  V   F E   PV            G 
Sbjct: 336 TVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAA-FIEWGMPV-------AAAQAGG 387

Query: 358 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            HT  ++  G++ ++G G S            G+LGHGND D   PT ++  E+ + + +
Sbjct: 388 SHTLVLNRRGQVFSFGSGDS------------GRLGHGNDNDQWSPTFLSALESERCVSI 435

Query: 417 SCGFNHTGALLE 428
           + GF H+ AL +
Sbjct: 436 AAGFAHSVALTD 447


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 170/372 (45%), Gaps = 36/372 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYS-LEP-LRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            QLG         + P L I  L+  V +QI  G  HS A++  G++  WG N  GQLG 
Sbjct: 70  SQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 129

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
                +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +
Sbjct: 130 ATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL 188

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +
Sbjct: 189 ------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 242

Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P  V 
Sbjct: 243 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV- 301

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                  ++ + ++I  V+CG +HT A+  S G++  +G G            S GQLG 
Sbjct: 302 -------MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGT 342

Query: 394 GNDVDYIHPTIV 405
            +    + P +V
Sbjct: 343 RSTKSLMLPQVV 354



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 45/290 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHG---QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           +    +LGH    +   +  FL         LI EL+   +     G  HS  + + G+V
Sbjct: 66  SNDYSQLGHDLPTKRPRMSPFL---------LIPELQDYVIIQICCGSRHSLALSDWGQV 116

Query: 260 YIFGDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
             +GD        A DK + Q     R+  L++K     ++ CG  H+  LTS GELY+W
Sbjct: 117 LSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSW 172

Query: 313 GSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
           GSN  G LG+ S + L   + P R+           +   +  ++CG  H+  IS+   +
Sbjct: 173 GSNIYGQLGVNSPNDLTHCNYPLRL--------TTLLGIPLAAIACGGNHSFLISKSGAV 224

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            +GW          G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 225 -FGW----------GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 263



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 21/157 (13%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN+   LG      L + 
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHD----LPTK 79

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
                PF   P  Q    I+ + CG +H+ A+S+ G++L+WG             +  GQ
Sbjct: 80  RPRMSPFLLIPELQDYV-IIQICCGSRHSLALSDWGQVLSWG------------DNDCGQ 126

Query: 391 LGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 426
           LGH  D + +  P +V        +Q++CG NH+ AL
Sbjct: 127 LGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 15/274 (5%)

Query: 44  GNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
             G  GR G      RW  P    A +      ++CG  H+L +   G V+A G    GQ
Sbjct: 51  SRGQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQ 106

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ E    +  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+ 
Sbjct: 107 LGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF 166

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G  
Sbjct: 167 PSQ-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRN 219

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 282 SLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
            L+ ++     ++ CGG HT   + + G++ ++G
Sbjct: 280 QLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 35/312 (11%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
           A G  H L L     V++ G N  GQLG      + L EP++ +  LK ++V  S G  H
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G +  ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGVG-ELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSG 306
             G  + +G  +  ++     N    + +P  I  L      Y   + CG  HT VL+  
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLSQD 254

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--S 364
           G+++T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   +
Sbjct: 255 GKVFTFGDNSSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGGDHTIAYVHT 305

Query: 365 EGKILTWGWGGS 376
            G+++++G G S
Sbjct: 306 TGQVVSFGRGPS 317



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 42/311 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  H+  +  +  ++  G+NS GQLG  ++ A    +P  V+ L  +     +
Sbjct: 24  ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TPR I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--PFSESPVDQICTSIVLVSCGW 357
           +  L+  G  + WGSN  G L +   +V     +VQ   P S   +  +   ++ +SCG 
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV-----QVQSNKPLSIGALKNL--GVIYISCGD 245

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-- 414
           +HTA +S +GK+ T+            G +S GQLG+    +   P +V   E +  L  
Sbjct: 246 EHTAVLSQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVS 290

Query: 415 QVSCGFNHTGA 425
           Q+ CG +HT A
Sbjct: 291 QIDCGGDHTIA 301



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 30/276 (10%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L  +  +V    P  +  L  +     + G E +  ++  GKV ++G   SG+LG+  
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                G         P+L++ ++G+  +I   G    A +   G+V  FG          
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG---------- 313

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                R PS  SK P   E +   +    L S  +L
Sbjct: 314 -----RGPSATSK-PTHPEALKENFDIRCLISADDL 343



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 24/138 (17%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +   G  H  +L +   +++ G N  G LG         PE VQ   +            
Sbjct: 27  QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT--------LKFD 78

Query: 352 LVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFG 408
           LVSCG +H+ A+  +G++  WG G            S GQLG G   ++++  P  +   
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAG------------SEGQLGVGELKEINFT-PRKITTL 125

Query: 409 ENVKALQVSCGFNHTGAL 426
             +K +QVSCG  H+ AL
Sbjct: 126 NGIKIIQVSCGHYHSLAL 143


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 206 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 263

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 264 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 321

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 322 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 376

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 377 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 431 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 490

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
           +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 491 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 530

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G G       P +V   +  K  +V+CG  HT A
Sbjct: 531 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 564



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
           G +Y WG N  GQLG G + AKV                                     
Sbjct: 201 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 259

Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                         +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 260 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 319

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 320 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 370

Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 371 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430

Query: 325 IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
            D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 431 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 476

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                  +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 477 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 509



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
           G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 199 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 249

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
             +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 250 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 309

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 310 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 361

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 362 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 400


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 175/383 (45%), Gaps = 59/383 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P V  +      ++++CG  + + +T+ G +Y+ G    G+LG      Y   P  I   
Sbjct: 290 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEF 348

Query: 122 KKEVVQIST-GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
               V+++  G  H+ A+T  G+LY WG   ++ G LGLG  A+   P+    + + GI+
Sbjct: 349 NGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIY 407

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            K  + G   +  VT  GK+ ++G G  G LGHG            S   PR ++ L G 
Sbjct: 408 VKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGC 458

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARR----------PSLISK 286
           +   AA G  HSA +     V +FG+      LF   +G+  R           PS +++
Sbjct: 459 RTIKAACGVWHSAAV-----VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTE 513

Query: 287 LPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           L  +  ++V CG   T  L+  G++Y  G+ +       S D++ +P  ++G   +S V 
Sbjct: 514 LDTTSFQQVACGQSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQ 567

Query: 345 QICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
           +       V+CG+ H A + S+ ++ TWG G            S GQLGHG+      PT
Sbjct: 568 E-------VACGFHHIAVLNSKAEVYTWGKG------------SNGQLGHGDTEYRCMPT 608

Query: 404 IVNFGENVKALQVSCGFNHTGAL 426
           +V   +  +  +V CG N+T  +
Sbjct: 609 LVKALKGKQVRKVVCGSNYTATI 631



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 154/344 (44%), Gaps = 44/344 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
           WG    GRLG G       P +   F   +++   CG  HT  +T +G +YA G  D   
Sbjct: 323 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 382

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG+     +  +P+RI G  +   V  IS G  H++ +T +G+L+ +G  + G LG G
Sbjct: 383 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
            + +    IP +VE L+G  T +AA G   S AV       T  GK+ +WG G  GRLGH
Sbjct: 442 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 499

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
           G     L          P  + EL+    +  A G   +  +  +G+VY  G  D + D 
Sbjct: 500 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 550

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +        R PS I       + +EV CG +H  VL S  E+YTWG   NG LG G  +
Sbjct: 551 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 602

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
               P  V+    +         +  V CG  +TA I   K +T
Sbjct: 603 YRCMPTLVKALKGK--------QVRKVVCGSNYTATICLHKPIT 638



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 123/273 (45%), Gaps = 42/273 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  ++    +  +  + G   +V VT  G++ SWG    GRLGHG  S +         
Sbjct: 289 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 341

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
             P+LI E  G  V++A  G  H+  +  +G +Y +GD   +  L   G   +H +   +
Sbjct: 342 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 399

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + ++   Y + + CG +HT  +TS G+L+T+G    G LG G     + P  V+      
Sbjct: 400 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNG-- 457

Query: 342 PVDQICTSIVLVSCGWKHTAAI--------SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
                C +I   +CG  H+AA+        S GK+ TWG G              G+LGH
Sbjct: 458 -----CRTIK-AACGVWHSAAVVSVFGEATSSGKLFTWGDG------------DDGRLGH 499

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+    + P+ V   +     QV+CG + T AL
Sbjct: 500 GDIECRLIPSCVTELDTTSFQQVACGQSITVAL 532



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 25/236 (10%)

Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           V  WG   G G LG G   S       T  + P+++K    +  +  + G  ++  + + 
Sbjct: 258 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 317

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           G++Y +G+ +  ++     ++   P LI +   S  E   CG +HTC +T+ G+LY WG 
Sbjct: 318 GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGD 377

Query: 315 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTW 371
            ++  G LG+GS      P R+ G      V  I       SCG  HTA + SEGK+ T+
Sbjct: 378 GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAI-------SCGPWHTAFVTSEGKLFTF 430

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           G     GTF        G LGHG+ +    P  V      + ++ +CG  H+ A++
Sbjct: 431 G----DGTF--------GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474


>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
 gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
 gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_a [Mus musculus]
          Length = 531

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
           TP  +  L G+ V     G+ H+  + + G +Y +G     ++     N+   P+  ++ 
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282

Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           K    E   C   HT    T GG +Y WG
Sbjct: 283 KERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 36/318 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P     ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V +T   G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G ++ +G     ++      +   P  ++   +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHGMCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG G+  + + PT +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MV 281

Query: 409 ENVKALQV-SCGFNHTGA 425
           E  + +++ +C   HT A
Sbjct: 282 EKERVIEIAACHSTHTSA 299



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GEL+ WG N  G +G GS     +P +V        V       V ++CG   + A+
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV-------VNIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ H
Sbjct: 197 LDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333


>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 1
 gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Mus musculus]
          Length = 531

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
           TP  +  L G+ V     G+ H+  + + G +Y +G     ++     N+   P+  ++ 
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282

Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           K    E   C   HT    T GG +Y WG
Sbjct: 283 KERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 36/318 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P     ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V +T   G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G ++ +G     ++      +   P  ++   +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHGMCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG G+  + + PT +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MV 281

Query: 409 ENVKALQV-SCGFNHTGA 425
           E  + +++ +C   HT A
Sbjct: 282 EKERVIEIAACHSTHTSA 299



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GEL+ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-------RVVNIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ H
Sbjct: 197 LDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     L  L  +      VQI  G      +T +G++Y  G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG     V  +P ++  LS    K+ A+  G   S+A+T  GKV SWG G  G+L
Sbjct: 3526 NGRLGLGITTGTV-SVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +V+  A G  HSA I  NG +Y +G     +
Sbjct: 3585 GH--------FSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGR 3635

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG-- 323
            +   +     +P  +  L +    +V CG     T  LT  G++Y+WG  + G LG G  
Sbjct: 3636 LGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGS 3695

Query: 324  -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
               +V H  +R++         ++C     + CG + + A+++ G++ TWG G       
Sbjct: 3696 EGCNVPHEVDRLRD-------QKVCQ----IECGAQFSLALTKSGQVWTWGKGDYF---- 3740

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG D     P IV   +  K + V+ G  H  A+ +
Sbjct: 3741 --------RLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTD 3779



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 176/390 (45%), Gaps = 38/390 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG        +PV C A        L  GG  TLF +T  G V+ATG    G
Sbjct: 4466 WGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLV-GGEQTLFAVTAEGKVFATGYGAGG 4524

Query: 102  QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            +LG+  +E++ +  +   I  +  + + +++G  H  A++ +GE+Y WG+  +G+LG G 
Sbjct: 4525 RLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4584

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            ++      P  ++ L G      A G   S  +T  G++ +WG G  GRLGHG       
Sbjct: 4585 RSP--CDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD------ 4636

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
               S  +  P+L++ L+  +V   A  +G   + CI ++  V+ +GD    K+     + 
Sbjct: 4637 ---SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4693

Query: 278  ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +V 
Sbjct: 4694 CKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVS 4753

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
               ++  +D  C S+  V+C          G++ +W            G +  GQLG G 
Sbjct: 4754 ALQNKKVIDVACGSLHCVAC-------TDTGEVFSW------------GDNDEGQLGDGT 4794

Query: 396  DVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                  P +V      K  +V+CG  H+ A
Sbjct: 4795 TNAIQRPRLVASLLGKKINRVACGSAHSLA 4824



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 35/308 (11%)

Query: 4    RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW--- 60
            R +T++++Y +K   K+    G       +T  + F+  WG GD G+LG     SRW   
Sbjct: 3542 RQITSLSQYVIK---KVAVHSGGRHSLALTTDGKVFS--WGEGDDGKLGHF---SRWNCD 3593

Query: 61   RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            +P +  A +   ++ +ACG +H+  +T  G +Y  GL ++G+LG  +N    L+P ++  
Sbjct: 3594 KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNT-TQLKPKQVKA 3652

Query: 121  LKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            L  E VVQ++ G   +   A+T +G++Y WG    G+LG G   ++   +P +V+ L   
Sbjct: 3653 LAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG--GSEGCNVPHEVDRLRDQ 3710

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
               Q   G + S+A+T  G+V +WG G   RLGHG ++ +           P++++ L+G
Sbjct: 3711 KVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV---------RKPQIVEGLKG 3761

Query: 238  VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYS-EE 292
             K+   A G LH   + ++G+V+ +GD        Q+GN      R+P+L+    Y   +
Sbjct: 3762 KKIVHVAVGALHCLAVTDSGQVFAWGDNDHG----QQGNGTTTVNRKPALVVLEGYKISK 3817

Query: 293  VVCGGYHT 300
            V CG  H+
Sbjct: 3818 VACGSSHS 3825



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 172/367 (46%), Gaps = 45/367 (12%)

Query: 72   SLKALAC----GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
            +L AL C    GG+ +LF +T+ G VYA G    G+LG+    G    P +I+ L + V+
Sbjct: 3493 NLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVI 3552

Query: 127  Q---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            +   + +G  HS A+T DG+++ WG+  +G+LG   +       P  +E L     +  A
Sbjct: 3553 KKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWN--CDKPRLIEALKSKRVRDIA 3610

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
             G   S A+T  G + +WG G  GRLGHG          +T++  P+ +K L   +V   
Sbjct: 3611 CGSSHSAAITSNGDLYTWGLGEYGRLGHGD---------NTTQLKPKQVKALAHERVVQV 3661

Query: 244  AAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
            A G     +  + + G+VY +GD    K+          P  + +L   +  ++ CG   
Sbjct: 3662 ACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQF 3721

Query: 300  TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
            +  LT  G+++TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H
Sbjct: 3722 SLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGK--------KIVHVAVGALH 3773

Query: 360  TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
              A+++ G++  WG         ++ H   GQ G+G       P +V   E  K  +V+C
Sbjct: 3774 CLAVTDSGQVFAWG---------DNDH---GQQGNGTTTVNRKPALVVL-EGYKISKVAC 3820

Query: 419  GFNHTGA 425
            G +H+ A
Sbjct: 3821 GSSHSIA 3827



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 135/290 (46%), Gaps = 21/290 (7%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
           G H + LT  G V++ G  D G+LG  +   +  EP  I+GL  K+V +I  G  +S A+
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHE-EPALITGLSGKQVAKICCGSSYSVAL 686

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           T +GE+Y WGK + G+LG G    +  P+  K      I       G  Q++AVT  G V
Sbjct: 687 TSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            SWG G  G+LG G               TP++I++L G  V     G   S  + ++G 
Sbjct: 747 YSWGDGDYGKLGRGGNDGC---------KTPKVIEKLMGQDVVRVYCGNQFSMALTKSGA 797

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
           VY +G     ++     +HAR P  I  L   +  ++  G  H   +T  GELY WG NE
Sbjct: 798 VYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNE 857

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
            G LG  SI     P  + G   +        +I+ V+CG   T A + G
Sbjct: 858 QGQLGNPSISNFTEPTLIGGMEGK--------NIIGVACGPTQTFAWTSG 899



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 163/359 (45%), Gaps = 46/359 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ +AC     L L++ G VY         +    ++  +L+ L   G  +EV++I++  
Sbjct: 577 VQQIACSERCCLILSKAGKVY---------MLYYTSLSPTLQQLNGFG-DREVIRIASHP 626

Query: 133 H--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
              H   +T DGE++ WG    G+LG G         P  +  LSG    +   G   SV
Sbjct: 627 DGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH--EEPALITGLSGKQVAKICCGSSYSV 684

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFL 248
           A+T  G+V SWG G  GRLGHG          S  + TP L+K  +G ++   A  +G  
Sbjct: 685 ALTSNGEVYSWGKGNFGRLGHGS---------SEDQTTPMLLKFFKGHRIVDVACGSGDA 735

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSG 306
            +  + ++G VY +GD    K+     +  + P +I KL   +   V CG   +  LT  
Sbjct: 736 QTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKS 795

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G +YTWG  +N  LG G+ D    P++++   S+   D        ++ G  H  AI+E 
Sbjct: 796 GAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKD--------IAIGSLHCMAITED 847

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             L +GWG           +  GQLG+ +  ++  PT++   E    + V+CG   T A
Sbjct: 848 GEL-YGWG----------RNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA 895



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 140/299 (46%), Gaps = 20/299 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG +  +   P   ++  ++ +K +A   GG H+L LT  G V++ G  D 
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG         +P  I  LK K V  I+ G  HS+AIT +G+LY WG    G+LG G 
Sbjct: 3582 GKLGHFSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   +V+ L+     Q A G    Q++A+T  GKV SWG G  G+LG G     
Sbjct: 3641 NTTQLKP--KQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGG---- 3694

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P  +  L   KV     G   S  + ++G+V+ +G     ++      H
Sbjct: 3695 -----SEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3749

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             R+P ++  L   +   V  G  H   +T  G+++ WG N++G  G G+  V   P  V
Sbjct: 3750 VRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALV 3808



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 15/220 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
            WG G YGRLG G  E + RP +  A + + +  +ACG   A TL +T+   V++ G  D+
Sbjct: 4624 WGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDY 4683

Query: 101  GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   + G  + P++I  L+ + V+++  G   S A+T  G +Y WGK    +LG G 
Sbjct: 4684 GKLGRGGSDGCKV-PMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG- 4741

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +   +  P KV  L        A G    VA T  G+V SWG    G+LG G  ++I  
Sbjct: 4742 -SDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAI-- 4798

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
                     PRL+  L G K+   A G  HS     N  V
Sbjct: 4799 -------QRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 21/273 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD G+LG G  ++   P + +      +  + CG ++++ LT  G VY+ G  +FG+
Sbjct: 643 WGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGR 702

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
           L  G SE+      P+ +   K   +V ++  +G   + A+T  G +Y WG    G+LG 
Sbjct: 703 LGHGSSED---QTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGR 759

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G         P  +E L G    +   G + S+A+T  G V +WG G + RLGHG E   
Sbjct: 760 GGNDG--CKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHA 817

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                      P+ I+ L   KVK  A G LH   I E+G +Y +G     ++     ++
Sbjct: 818 ---------RHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISN 868

Query: 278 ARRPSLISKLPYSEE--VVCGGYHTCVLTSGGE 308
              P+LI  +       V CG   T   TSGG+
Sbjct: 869 FTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 140/345 (40%), Gaps = 94/345 (27%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVI------------PI---------------------- 167
            G+++ WG N  GQLG G   AKV             PI                      
Sbjct: 4461 GQIWGWGHNHRGQLG-GVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATG 4519

Query: 168  -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                             PT++E +  +F K+ A+  G +  +A++  G+V SWG G  G+
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I  L G +V   AAG  HSACI  NG +Y +G     
Sbjct: 4580 LGHGNRSPC---------DRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYG 4630

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     RP L+  L      ++ CG     T  +T    +++WG  + G LG G 
Sbjct: 4631 RLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4690

Query: 325  IDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTF 380
             D    P   E +QG             ++ V CG + + A+++ G + TWG G  H   
Sbjct: 4691 SDGCKVPMKIETLQG-----------QGVMKVECGSQFSVALTKSGSVYTWGKGDYH--- 4736

Query: 381  SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                     +LGHG+D     P  V+  +N K + V+CG  H  A
Sbjct: 4737 ---------RLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 130/292 (44%), Gaps = 33/292 (11%)

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            +   ++ WG N   QLG G K +K I +PT  + LS +   Q   G +    VT  GKV 
Sbjct: 3462 IQTNVFCWGLNDKDQLG-GPKGSK-IKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVY 3519

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            + G   +GRLG G  +  +   R  +  +  +IK     KV + + G  HS  +  +G+V
Sbjct: 3520 ACGEATNGRLGLGITTGTVSVPRQITSLSQYVIK-----KVAVHSGG-RHSLALTTDGKV 3573

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +G+    K+      +  +P LI  L      ++ CG  H+  +TS G+LYTWG  E 
Sbjct: 3574 FSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEY 3633

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILTWGWG 374
            G LG G       P++V+    E         +V V+CG +     A   EGK+ +WG  
Sbjct: 3634 GRLGHGDNTTQLKPKQVKALAHE--------RVVQVACGSRDAQTLALTDEGKVYSWG-- 3683

Query: 375  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
               G F        G+LG G       P  V+   + K  Q+ CG   + AL
Sbjct: 3684 --DGDF--------GKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLAL 3725



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G++  WG    G+LG    + +   +   +    R I+ + G +   A          
Sbjct: 4459 GSGQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTA------- 4511

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
               G+V+  G  A  ++          P+ +  + +       V  GG H   L++ GE+
Sbjct: 4512 --EGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEV 4569

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  +     +  VD        ++ G  H+A I+  G++
Sbjct: 4570 YSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVD--------IAAGGAHSACITANGEL 4621

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D   P +V   ++ + + ++CG
Sbjct: 4622 YTWGKG------------RYGRLGHGDSEDQPRPKLVEALKSYRVVDMACG 4660


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 85  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 143

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 144 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 201

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 202 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 252

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 253 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 310

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 311 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 344



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 39  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 97

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 98  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 157

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 158 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 207

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 208 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 267

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 268 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDR 318

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 319 I---IEIAACHSAHTSAAKTQGGHVYMWG 344



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 71  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 121

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+ VLTS GE
Sbjct: 122 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 181

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G GS      P RV G      V  I       +CG   + A+ + G+
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI-------ACGQMCSMAVVDTGE 234

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 235 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 282

Query: 428 E 428
           +
Sbjct: 283 D 283



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 71  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 126

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 127 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 178

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 179 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 234

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 235 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 283

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG+I  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 284 EGQIYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 331

Query: 425 A 425
           A
Sbjct: 332 A 332



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 237 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 296

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 297 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 349

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 350 --SVILPHHTHFCCTDDVF 366


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDR 309

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 310 I---IEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G GS      P RV G      V  I       +CG   + A+ + G+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI-------ACGQMCSMAVVDTGE 225

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 226 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273

Query: 428 E 428
           +
Sbjct: 274 D 274



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 274

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG+I  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 275 EGQIYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 322

Query: 425 A 425
           A
Sbjct: 323 A 323



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 762  WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 819

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 820  GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 877

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 878  HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 932

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 933  ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 987  SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1046

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 1047 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 1086

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 1087 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 757  GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 815

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 816  YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 875

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 876  LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 926

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 927  RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 987  SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 1032

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 1033 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 1065



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 10/193 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+LG  +N    L+P  +  
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKV 63

Query: 121 LK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           L    V+Q++ G   +   A+T +G ++ WG    G+LG G   ++   IP  +E L+G 
Sbjct: 64  LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQ 121

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              Q   G + S+A+T  G V +W     G   HGQ+    G   +T    P L++ LEG
Sbjct: 122 GVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ----GNGTTTVNRKPTLVQGLEG 177

Query: 238 VKVKIAAAGFLHS 250
            K+   A G  HS
Sbjct: 178 QKITRVACGSSHS 190



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 17/162 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G   ++ +P +      H +  +ACG   A TL LT+ G V++ G  DF
Sbjct: 39  WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 98

Query: 101 GQLGI--SE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-----ELYMWGKNS 151
           G+LG   SE  NI  ++E L   G    V QI  G   S A+T  G     ++Y WG N 
Sbjct: 99  GKLGRGGSEGCNIPQNIERLNGQG----VCQIECGAQFSLALTKSGVVWTWQVYAWGDND 154

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           +GQ G G     V   PT V+ L G    + A G   SVA T
Sbjct: 155 HGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 29/206 (14%)

Query: 114 EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G    ++ P   KV 
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV- 63

Query: 173 CLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
            L G    Q A G    Q++A+T  G V SWG G  G+LG G          S     P+
Sbjct: 64  -LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---------SEGCNIPQ 113

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENG-----RVYIFGDRAVDKMLFQEGNHA----RRP 281
            I+ L G  V     G   S  + ++G     +VY +GD        Q+GN      R+P
Sbjct: 114 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHG----QQGNGTTTVNRKP 169

Query: 282 SLISKLPYSE--EVVCGGYHTCVLTS 305
           +L+  L   +   V CG  H+   T+
Sbjct: 170 TLVQGLEGQKITRVACGSSHSVAWTT 195



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 26/212 (12%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG          +T++ 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD---------NTTQL 56

Query: 228 TPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            P+++K L G +V   A G     +  + + G V+ +GD    K+          P  I 
Sbjct: 57  KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE 116

Query: 286 KLPYSE--EVVCGGYHTCVLTSGG-----ELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           +L      ++ CG   +  LT  G     ++Y WG N++G  G G+  V   P  VQG  
Sbjct: 117 RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 176

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            +         I  V+CG  H+ A +   + T
Sbjct: 177 GQ--------KITRVACGSSHSVAWTTVDVAT 200



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 32/208 (15%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PRLI+ L+  +++  A G  HSA +  +G +Y +G     ++   +     +P ++  L 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65

Query: 289 YSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSES 341
                +V CG     T  LT  G +++WG  + G LG G  +  + P   ER+ G     
Sbjct: 66  GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG----- 120

Query: 342 PVDQICTSIVLVSCGWKHTAAISE-GKILTW---GWGGSHGTFSEDGHSSGGQLGHGNDV 397
                   +  + CG + + A+++ G + TW    WG       ++ H   GQ G+G   
Sbjct: 121 ------QGVCQIECGAQFSLALTKSGVVWTWQVYAWG-------DNDH---GQQGNGTTT 164

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGA 425
               PT+V   E  K  +V+CG +H+ A
Sbjct: 165 VNRKPTLVQGLEGQKITRVACGSSHSVA 192



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +++  G G +  WG    G+LG  + + +       +  T R ++ + G +   A     
Sbjct: 750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA----- 804

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLT 304
               +  +G++Y  G  A  ++          P+L+  + +       V  GG H   L+
Sbjct: 805 ----VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS 860

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           S GE+Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++
Sbjct: 861 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVT 912

Query: 365 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             G + TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 913 AAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 956



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 64/158 (40%), Gaps = 37/158 (23%)

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           +P LI  L      ++ CG  H+  LTS GELYTWG  E G LG G       P+ V+  
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 338 FSESPVDQICTSIVLVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                       ++ V+CG +     A   EG + +WG     G F        G+LG G
Sbjct: 65  LGH--------RVIQVACGSRDAQTLALTDEGLVFSWG----DGDF--------GKLGRG 104

Query: 395 NDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 426
                      N  +N++ L      Q+ CG   + AL
Sbjct: 105 GSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 136


>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1271

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 181/410 (44%), Gaps = 76/410 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG+   G++G  S   R  PV      +A ++ +   +A G   +L +   G +YA G N
Sbjct: 228 WGDNSSGQVGDNSTTLRQTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNN 287

Query: 99  DFGQL--GISENIGYSLEPLRI---SGLKKEV--VQISTGYHHSSAITVDGELYMWGKNS 151
             GQL  G +EN    L P+++   +G+  E    Q+S  + H+ A+  +  LY WG N 
Sbjct: 288 TRGQLGDGTTEN---KLTPVKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNG 344

Query: 152 NGQLGL------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            GQLG           A     P  V   +G+   Q + G   S+A+    ++ +WG   
Sbjct: 345 YGQLGNTSVPTGSDNPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNT 404

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           SGRLG G +            +TP  +++  GV     +AG      I  NG +Y +G  
Sbjct: 405 SGRLGDGTD---------IQRFTPVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWN 455

Query: 266 AVDKMLFQEGNHA---RRPSLISKLPYSE------EVVCGGYHTCVLTSGGELYTWGSNE 316
              ++   +G++A   R P+LIS    +        V+    H   + S G LY+WG NE
Sbjct: 456 GYGRL--GDGSNAEDRRTPTLISPPDGASAGFTWARVMVRDDHVLAIGSDGNLYSWGLNE 513

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESP--VDQICTSI------VLVSCGWKHTAAI-SEGK 367
            G LGI  I+         G +   P  VDQ  +S         ++ GW+ ++A+ S+G 
Sbjct: 514 YGQLGIKDIN-------TDGSYISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGN 566

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           + TWGW            ++GGQLG         PT+    +N +A++++
Sbjct: 567 LYTWGW------------NNGGQLG--------DPTVPIGTDNSQAMRLT 596



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 154/358 (43%), Gaps = 39/358 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG   YG+LG G+   R  PV +      +    ++ G   +L L   G V+A GLN  G
Sbjct: 785  WGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSG 844

Query: 102  QLG---ISEN--IGYSLEPLRI---SGLKKE---VVQISTGYHHSSAITVDGELYMWGKN 150
            QLG   I+ N    YS  P+R+   SG+      +  IS G  H  A+   G  + WG N
Sbjct: 845  QLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSN 904

Query: 151  SNGQLGLGKKAAKVIPI---PTKVECLSGIFT----KQAALGFEQSVAVTGGGKVLSWGA 203
              G+LG+         I   P +V    G  T     Q + G   S+A    G+   WG+
Sbjct: 905  EFGKLGVPASTVATTGITTRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGS 964

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              +G LG+  + ++ G+  +  +  P       G       AG  HS  +D+ GR++ +G
Sbjct: 965  NQNGALGNTSDVALNGYTTTPVQAKPG-TNPSGGFNPAQIIAGSGHSLALDDLGRIWSWG 1023

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEEV--------VCGGYHTCVLTSGGELYTWGSN 315
              +  ++   +      PS+++ +P +           V G  ++  L   G ++ WG N
Sbjct: 1024 GNSNGELGLGDTTTRTAPSMVA-MPANVSTFTQLTGSRVSG--NSLALDQNGNIWGWGQN 1080

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
             +G LG G    L+ P ++  P   S +D      V V  G  HT A+ S+G  L WG
Sbjct: 1081 SSGMLGTGGTGSLNRPTKMSNP---SGIDH----FVKVCAGTGHTLAVASDGSTLGWG 1131



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 145/345 (42%), Gaps = 56/345 (16%)

Query: 101  GQLGISENIG-------YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            GQ  IS N G        +L P    G++    Q+S G  HS A+  DG +Y WG N  G
Sbjct: 734  GQWTISPNQGPDSGQTKVTLVPPAARGIR--FSQVSAGDDHSLALGSDGNVYSWGANKYG 791

Query: 154  QLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
            QLG G    ++ P+    PT V   + +    A  GF  S+A+ G G V +WG   SG+L
Sbjct: 792  QLGDGTATDRLTPVQIPKPTGVNRFTQV---SAGTGF--SLALDGQGHVWAWGLNSSGQL 846

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-----AAAGFLHSACIDENGRVYIFGD 264
            G    ++I     S    +P  ++   G+          +AG  H   +D  GR + +G 
Sbjct: 847  G---SNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGS 903

Query: 265  RAVDKMLFQEGNHA-----RRPSLISKLPYSE-------EVVCGGYHTCVLTSGGELYTW 312
                K+       A      RP  ++  P  E       +V  GG H+    + G  + W
Sbjct: 904  NEFGKLGVPASTVATTGITTRPVQVAT-PQGETTGFHYAQVSAGGSHSLATDTQGRAWGW 962

Query: 313  GSNENGCLGIGSIDVL--HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            GSN+NG LG  S   L  ++   VQ     +P      + ++   G  H+ A+ + G+I 
Sbjct: 963  GSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSG--HSLALDDLGRI- 1019

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
             W WGG          +S G+LG G+      P++V    NV   
Sbjct: 1020 -WSWGG----------NSNGELGLGDTTTRTAPSMVAMPANVSTF 1053



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 159/395 (40%), Gaps = 57/395 (14%)

Query: 63   VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---S 119
            +V  A        ++ G  H+L L   G VY+ G N +GQLG        L P++I   +
Sbjct: 753  LVPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDR-LTPVQIPKPT 811

Query: 120  GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAKVIPIPTKVEC 173
            G+ +   Q+S G   S A+   G ++ WG NS+GQLG       G  A    PI  +V+ 
Sbjct: 812  GVNR-FTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPI--RVQA 868

Query: 174  LSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             SG+      L     G    +AV G G+   WG+   G+LG      +     +T+  T
Sbjct: 869  PSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLG------VPASTVATTGIT 922

Query: 229  PRLIK------ELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------RAVDKML--FQ 273
             R ++      E  G      +AG  HS   D  GR + +G           D  L  + 
Sbjct: 923  TRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYT 982

Query: 274  EGNHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                  +P       ++  +++ G  H+  L   G +++WG N NG LG+G      +P 
Sbjct: 983  TTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPS 1042

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
             V  P + S   Q+  S V  +      A    G I  WGW          G +S G LG
Sbjct: 1043 MVAMPANVSTFTQLTGSRVSGNS----LALDQNGNI--WGW----------GQNSSGMLG 1086

Query: 393  HGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 426
             G       PT ++    +   ++V  G  HT A+
Sbjct: 1087 TGGTGSLNRPTKMSNPSGIDHFVKVCAGTGHTLAV 1121



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 136/321 (42%), Gaps = 51/321 (15%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT-K 170
           +L P    G+K    QI++G  HS A+  DG LY WG NS+GQ+G      +  P+ T K
Sbjct: 195 TLTPPATRGIK--FSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNK 252

Query: 171 VECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
               S  FT    A G   S+A+   G + +WG    G+LG G   + L         TP
Sbjct: 253 PANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKL---------TP 303

Query: 230 RLIKELEGVKVKIA----AAGFLHSACIDENGRVYIF--------GDRAVDKMLFQEGNH 277
             + +  GV  +      +A + H+  +  N  +Y +        G+ +V         +
Sbjct: 304 VKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSDNPAAY 363

Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           + +P L+S        ++  G YH+  L S  +LY WG N +G LG G+ D+        
Sbjct: 364 SSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGT-DIQR------ 416

Query: 336 GPFSESPVDQIC-TSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
             F+  PV Q    +    S G     AIS  G +  WGW G             G+LG 
Sbjct: 417 --FTPVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGY------------GRLGD 462

Query: 394 GNDV-DYIHPTIVNFGENVKA 413
           G++  D   PT+++  +   A
Sbjct: 463 GSNAEDRRTPTLISPPDGASA 483



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 34/290 (11%)

Query: 72   SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEPLRISGLKKEVV- 126
            +L  ++ G  H L +   G  +  G N+FG+LG+  +     G +  P++++  + E   
Sbjct: 878  TLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQGETTG 937

Query: 127  ----QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA----KVIPIPTK--VECLSG 176
                Q+S G  HS A    G  + WG N NG LG     A       P+  K       G
Sbjct: 938  FHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGG 997

Query: 177  IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-----SILGFLRSTSEYTPRL 231
                Q   G   S+A+   G++ SWG   +G LG G  +     S++    + S +T   
Sbjct: 998  FNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFT--- 1054

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LP 288
              +L G +V        +S  +D+NG ++ +G  +   +         RP+ +S    + 
Sbjct: 1055 --QLTGSRVS------GNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRPTKMSNPSGID 1106

Query: 289  YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            +  +V  G  HT  + S G    WG N  G LG  + + ++SP  V  PF
Sbjct: 1107 HFVKVCAGTGHTLAVASDGSTLGWGDNSQGRLGNNATETVYSPVSVLFPF 1156


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 228 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 285

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 286 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 343

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 344 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 398

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 399 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 452

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 453 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 512

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
           +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 513 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 552

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G G       P +V   +  K  +V+CG  HT A
Sbjct: 553 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 586



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
           G +Y WG N  GQLG G + AKV                                     
Sbjct: 223 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 281

Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                         +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 282 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 341

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 342 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 392

Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 393 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 452

Query: 325 IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
            D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 453 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 498

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                  +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 499 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 531



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +++  G G +  WG    G+LG  + + +       +  T R ++ + G +   A     
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA----- 270

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLT 304
               +  +G++Y  G  A  ++          P+L+  + +       V  GG H   L+
Sbjct: 271 ----VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS 326

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           S GE+Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++
Sbjct: 327 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVT 378

Query: 365 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             G + TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 379 AAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 422


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + + I    CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVERIDGLVSQI---DCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 146/309 (47%), Gaps = 38/309 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCGFNHTGA 425
            CG  HT A
Sbjct: 293 DCGSYHTLA 301



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 39/257 (15%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--GQESSILGFLRSTSEYTPRLIKELEGV 238
           QAA G   S+ +    +VLS G    G+LG    Q   +           P  I+ LE +
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-----------PEPIQALETL 75

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVC 295
            V + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V C
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           G YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ Q       V+
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ-------VA 187

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENV 411
            G  H+ A+S     ++GWG           +S GQL   G    V    P  V   +N+
Sbjct: 188 AGGAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 412 KALQVSCGFNHTGALLE 428
             + +SCG  HT  L +
Sbjct: 237 GVVYISCGDAHTAVLTQ 253



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++        ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT------LNDI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 13/296 (4%)

Query: 72   SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
            S+ A+ACG  H L ++ +G V++ G  + GQLG+      S  P ++       + Q++ 
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVAC 1821

Query: 131  GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
            G  HS A+T  G+++ WG NS+GQLGLGK+   V   P  +  L+G+   Q A G   S+
Sbjct: 1822 GNSHSLALTKGGDVFSWGLNSHGQLGLGKEVP-VQHTPVIICALAGVAVTQIAAGGTHSL 1880

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V   GA   G+LG       +  +     +   ++  L  + V   + G  HS
Sbjct: 1881 FLTLADLVYCCGANKCGQLG-------VNRVDEKGRFNICMVPALRPLSVSFISCGESHS 1933

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
            A + ++G+VY FGD +  ++      +  +P L++ L  P S ++ CG +HT VL S G+
Sbjct: 1934 AVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGPAS-QIACGRHHTLVLGSSGQ 1992

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            L+ +GS   G  G G  D   +P  VQ P++      +  S + ++ GW    A S
Sbjct: 1993 LWAFGSGAKGQTGNGHNDSCLTPTLVQFPWTTDDTAAM-PSDLKIAAGWNTNFAYS 2047



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 161/379 (42%), Gaps = 60/379 (15%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+ G  +  S     V     K     + CG  HTLFL   G V + G N  GQ
Sbjct: 1688 WGDSSSGQFGPQAAPSPVSWTVPGVITK-----ICCGDRHTLFLNADGNVLSCGHNSQGQ 1742

Query: 103  LGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LG  +     I   +E L        VV ++ G  H  A++  G ++ WG   +GQLGL 
Sbjct: 1743 LGRQKKKNGKIIAQVEAL------GSVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLL 1796

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +     P+KV     I   Q A G   S+A+T GG V SWG    G+LG G+E  + 
Sbjct: 1797 PTPSSS-HRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPV- 1854

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDK 269
                   ++TP +I  L GV V   AAG  HS  +     VY  G         +R  +K
Sbjct: 1855 -------QHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEK 1907

Query: 270  MLFQEGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              F   N    P+L    P S   + CG  H+ VLT  G++YT+G    G LG  +    
Sbjct: 1908 GRF---NICMVPAL---RPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANE 1961

Query: 329  HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 388
              P+ V G   + P  QI       +CG  HT  +           GS G     G  + 
Sbjct: 1962 VKPKLVAG--LDGPASQI-------ACGRHHTLVL-----------GSSGQLWAFGSGAK 2001

Query: 389  GQLGHGNDVDYIHPTIVNF 407
            GQ G+G++   + PT+V F
Sbjct: 2002 GQTGNGHNDSCLTPTLVQF 2020



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 192/472 (40%), Gaps = 121/472 (25%)

Query: 44   GNGDYGRLGLGS----LESRWRPVVCS-AFEKHSLKA-LACGGAHTLFLT-----ETGC- 91
             NG Y  L + S    L +  R  +CS   E   +KA L   G +  ++T     E GC 
Sbjct: 1548 SNGSYALLSIDSGAINLLNLSRVTLCSFKVEGPVIKACLDKTGRYVAYITTPSGLEDGCD 1607

Query: 92   --VYATGLNDFGQLGISENIG---YSLEPLRISGLKKEVVQI-----STGYHHSSAITVD 141
              ++A  +    +L   E +G    S  PL +   ++  V +     S G ++ S +TVD
Sbjct: 1608 CYLHARPILQVMRLSDGERLGAVHLSKNPLALVICEQHCVFVGFGDGSVGVYYISDVTVD 1667

Query: 142  GE---------------LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
             +               L+ WG +S+GQ G      +  P P     + G+ TK    G 
Sbjct: 1668 EDEPIRCWEDPSGGDMQLFCWGDSSSGQFG-----PQAAPSPVSW-TVPGVITK-ICCGD 1720

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AA 245
              ++ +   G VLS G    G+LG  ++ +             ++I ++E +   +A A 
Sbjct: 1721 RHTLFLNADGNVLSCGHNSQGQLGRQKKKN------------GKIIAQVEALGSVVAMAC 1768

Query: 246  GFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLI--SKLPYSEEVVCGGYHTCV 302
            G  H   +  +G V+ +G     ++ L    + + RPS +         +V CG  H+  
Sbjct: 1769 GQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLA 1828

Query: 303  LTSGGELYTWGSNENGCLGIG-SIDVLHSPERV--------------------------- 334
            LT GG++++WG N +G LG+G  + V H+P  +                           
Sbjct: 1829 LTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLV 1888

Query: 335  -------QGPFSESPVDQ-----ICT-------SIVLVSCGWKHTAAIS-EGKILTWGWG 374
                    G    + VD+     IC        S+  +SCG  H+A ++ +GK+ T+G G
Sbjct: 1889 YCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFGDG 1948

Query: 375  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                        S GQLGH    + + P +V  G +  A Q++CG +HT  L
Sbjct: 1949 ------------SQGQLGHSTSANEVKPKLVA-GLDGPASQIACGRHHTLVL 1987


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 179/410 (43%), Gaps = 41/410 (10%)

Query: 25  GICKRWISSTLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH 82
           G C R  SS  +R    +W  G   YG LG     +R    +   FE   +  +A G  H
Sbjct: 219 GSCLRACSSFHERE---VWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEH 275

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAIT 139
           T+ L  TG VY  G ND GQ   G ++ +G  L  + I G +K V V    G  H+  + 
Sbjct: 276 TVLLCSTGEVYTAGYNDNGQCGQGTTQRVGV-LTRVPIDGGRKAVQVHAYNGCEHTLVVL 334

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG++  +G N  GQLG G  +++  P+P  V  L+GI   QA+  +  SV     G+V 
Sbjct: 335 DDGQMMSFGYNYRGQLGQGNTSSE--PVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVY 392

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           ++G    G+LG G                P L++ L G ++   A G  H+        V
Sbjct: 393 TFGRNDFGQLGSGD---------VIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGV 443

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
              G     ++  +     R+   +  KL  ++   V CG YHT VLT+   ++ +G N+
Sbjct: 444 QSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRND 503

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGS 376
            G LG+G     H+ +RV GP       +    +  +S G  HT  I    +L + +G +
Sbjct: 504 YGQLGLG-----HTTQRVFGPTIIEGAQE--KHVYRISAGCYHTVLIDADGML-FVFGRN 555

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           H           GQLG G+  +   P  V+     +  +V+ GF HT  L
Sbjct: 556 H----------HGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVL 595



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 4/156 (2%)

Query: 44  GNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  DYG+LGL S ES+ + V V    +   ++ + CG  HT+ LT    V+  G ND+GQ
Sbjct: 447 GKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQ 506

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+         P  I G + K V +IS G +H+  I  DG L+++G+N +GQLG G   
Sbjct: 507 LGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTN 566

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
            +  P P  V    G    + A GF  ++ +TGG K
Sbjct: 567 ERHSPFP--VSTFLGKRIAKVAAGFYHTIVLTGGDK 600



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 13/263 (4%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG G+  S   P          +   +C   H++   + G VY  G NDFGQLG  + 
Sbjct: 348 GQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDV 407

Query: 109 IGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
           I   L P  +  L+ + +  ++ G +H+   T++  +   GKN  GQLGL    ++   +
Sbjct: 408 IDRKL-PCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFV 466

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
             K + L G   +    G+  ++ +T    V  +G    G+LG G  +  +        +
Sbjct: 467 AVKGK-LDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRV--------F 517

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            P +I+  +   V   +AG  H+  ID +G +++FG     ++   + N    P  +S  
Sbjct: 518 GPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTF 577

Query: 288 --PYSEEVVCGGYHTCVLTSGGE 308
                 +V  G YHT VLT G +
Sbjct: 578 LGKRIAKVAAGFYHTIVLTGGDK 600


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 169/353 (47%), Gaps = 62/353 (17%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFGQLGISENIGYSLEP---- 115
           +P +  A E   +  L+CG +H+  +  E+G VY  GL   G+LG +EN G   EP    
Sbjct: 150 QPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLG-NENEGVVQEPQVLE 208

Query: 116 -LRIS-GLKKEVVQISTGYHHSSAI----------TVDGELYMWGKNSNGQLGLGKKAA- 162
            L+I+  +K +V+QIS G +H+ A+          T   +L++WG N   QLG+  +A  
Sbjct: 209 CLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADG 268

Query: 163 ---------------KVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAG 204
                          ++ P P + +  +  ++ Q       +  S A+T  G V +WG+G
Sbjct: 269 NNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSG 328

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             GRLG         ++    +  P+++KEL G +V   + G+ H A I E G+V+ +G 
Sbjct: 329 EFGRLG---------YMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWG- 378

Query: 265 RAVDKML----FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           R ++  L        +  R  S +  + +  ++ CG  HT  LT+ GE+Y+WG  +    
Sbjct: 379 RGINGQLGHGSVLNEDQVRPVSALQNI-HIIDISCGESHTLALTNKGEVYSWGGGQ--LG 435

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWG 372
            +G  D L    R   P     V  +  +I  +S G +H++A++ +GK+ TWG
Sbjct: 436 QLGHGDFL----RQSLPIK---VANLEDNIAQISAGKRHSSALTDDGKLFTWG 481



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 50/317 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFL----------T 87
           WG G  GRLG  +      P V    +     K  +  ++CG  HTL L          T
Sbjct: 185 WGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGET 244

Query: 88  ETGCVYATGLNDFGQLGISE---------------NIGYSLEPLRIS------GLKKEVV 126
               ++  G ND  QLG+                 ++ + L+P              +++
Sbjct: 245 SQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI 304

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALG 185
            +   Y++S+A+T +G +Y WG    G+ G LG    K  P P  ++ L+G    + +LG
Sbjct: 305 GVHASYYYSAALTSNGNVYTWGS---GEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLG 361

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
           +    A+T  G+V SWG G +G+LGHG   S+L      +E   R +  L+ + +   + 
Sbjct: 362 YYHGAAITEQGQVFSWGRGINGQLGHG---SVL------NEDQVRPVSALQNIHIIDISC 412

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
           G  H+  +   G VY +G   + ++   +      P  ++ L  +  ++  G  H+  LT
Sbjct: 413 GESHTLALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALT 472

Query: 305 SGGELYTWGSNENGCLG 321
             G+L+TWGSNE G LG
Sbjct: 473 DDGKLFTWGSNEYGQLG 489



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 158/363 (43%), Gaps = 78/363 (21%)

Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLG----------LGKKA 161
           P R+  L+K  + Q+  G   +  IT   E  ++ WG N N +LG          +   +
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHG-----QES 215
            +++  PT V+ L        + G   S A +   G V  WG G +GRLG+      QE 
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEP 204

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE----NGRVYIFGDRAVDKML 271
            +L  L+   E   ++++   G    +A    +     +E      +++++G+   DK+ 
Sbjct: 205 QVLECLKIAMEIKMKVLQISCGENHTLA---LIQMPPQNEGETSQNKLFVWGNN--DKLQ 259

Query: 272 F-----QEGNH-----ARRPSLISKLP------------YSEEVV---CGGYHTCVLTSG 306
                  +GN+     AR  S+  +L             YS +++      Y++  LTS 
Sbjct: 260 LGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSN 319

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE- 365
           G +YTWGS E G LG   I     P+ ++        +     +  +S G+ H AAI+E 
Sbjct: 320 GNVYTWGSGEFGRLGYMDIKKQPQPKVLK--------ELTGFQVTRISLGYYHGAAITEQ 371

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGN--DVDYIHPTIVNFGENVKALQVSCGFNHT 423
           G++ +WG G              GQLGHG+  + D + P  V+  +N+  + +SCG +HT
Sbjct: 372 GQVFSWGRG------------INGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHT 417

Query: 424 GAL 426
            AL
Sbjct: 418 LAL 420



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 49/300 (16%)

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGK--VLSWGAGGSGRLGHGQESSILGFLRS 223
           P P +V  L      Q   G +Q+  +T   +  V SWG+  + +LGH         + S
Sbjct: 83  PRPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSS 142

Query: 224 TS---EYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           +S      P ++K LE  K+   + G  HS A  +E+G VY +G     ++  +     +
Sbjct: 143 SSIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQ 202

Query: 280 RPSLISKLPYSEEV-------VCGGYHTCVL----------TSGGELYTWGSNENGCLGI 322
            P ++  L  + E+        CG  HT  L          TS  +L+ WG+N+   LG+
Sbjct: 203 EPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGM 262

Query: 323 -----GSIDVLHSPERVQGPFSESP--------VDQICTSIVLVSCGWKHTAAI-SEGKI 368
                G+ + + S   +  P    P               ++ V   + ++AA+ S G +
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNV 322

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            TWG G              G+LG+ +      P ++      +  ++S G+ H  A+ E
Sbjct: 323 YTWGSG------------EFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITE 370


>gi|443686928|gb|ELT90046.1| hypothetical protein CAPTEDRAFT_159495 [Capitella teleta]
          Length = 446

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 176/393 (44%), Gaps = 37/393 (9%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G GD G+LGLG  +  R RP +        +  +A GG HT  LT+ G V+  G ND G 
Sbjct: 70  GTGDTGQLGLGEDIMDRARPALVKI--DGEIVQIAAGGMHTACLTKDGKVFTFGCNDEGA 127

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGKK 160
           LG S           +  LK ++VQIS G  H++A+  DGELY WG  +++NG +GL   
Sbjct: 128 LGRSTPEEEDCFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWGTFRDANGSIGLQTP 187

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-SILG 219
             +    PT +  LSG    + A G +  + +T  G++ S G    G+LG   E  S  G
Sbjct: 188 KTRS---PTPIVLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTRG 244

Query: 220 FLRSTS-EYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
             +  S   TP  +  +L   K      G   S    + G +Y +G     ++ F +  +
Sbjct: 245 GRKGLSLLLTPAAVHCKLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFDDMVN 304

Query: 278 ARRP----SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
              P    S  + L + +++  G +HT  L + G++YT G  + G LG+G      + E+
Sbjct: 305 RYVPDRCKSFKTDLDW-KDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDN---VTEEK 360

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
            +     S  D  C++   V+CG   + A++E G +  WG G +             QLG
Sbjct: 361 SEPTAVTSLKDVKCSA---VTCGSAVSLAVAENGAVYAWGMGCNQ------------QLG 405

Query: 393 HGNDVDYIHPT--IVNFGENVKALQVSCGFNHT 423
              D D   PT  I    E    + VS G  HT
Sbjct: 406 QAEDDDLYEPTQIISKQMETRDGIMVSAGGQHT 438



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 10/180 (5%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSS 136
           GG  +   T+TG +Y+ GLN++ Q+G  + +   + P R    K ++    IS G HH+ 
Sbjct: 273 GGWTSFAKTDTGDIYSWGLNNYFQIGFDDMVNRYV-PDRCKSFKTDLDWKDISGGQHHTI 331

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           A+  +G++Y  G+   G LGLG    +    PT V  L  +       G   S+AV   G
Sbjct: 332 ALDANGQVYTLGRKDYGVLGLGDNVTEEKSEPTAVTSLKDVKCSAVTCGSAVSLAVAENG 391

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V +WG G + +LG  ++  +        E T  + K++E     + +AG  H+  + ++
Sbjct: 392 AVYAWGMGCNQQLGQAEDDDLY-------EPTQIISKQMETRDGIMVSAGGQHTVILAKD 444



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 32/207 (15%)

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+ L+ G G +G+LG G++  I+   R      P L+K ++G  V+IAA G +H+AC+ +
Sbjct: 64  GQTLTIGTGDTGQLGLGED--IMDRAR------PALVK-IDGEIVQIAAGG-MHTACLTK 113

Query: 256 NGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +G+V+ FG  D         E      PS++       ++  G  HT  L   GELY WG
Sbjct: 114 DGKVFTFGCNDEGALGRSTPEEEDCFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWG 173

Query: 314 S--NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS---IVLVSCGWKHTAAISE-GK 367
           +  + NG +G+            Q P + SP   +  S   ++ V+ G  H   ++E G+
Sbjct: 174 TFRDANGSIGL------------QTPKTRSPTPIVLLSGQRVIKVASGDDHILCLTENGQ 221

Query: 368 ILTWGWG--GSHGTFSEDGHSSGGQLG 392
           I + G    G  G  +E   + GG+ G
Sbjct: 222 IFSMGNADQGQLGRVAECFSTRGGRKG 248



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 144/371 (38%), Gaps = 83/371 (22%)

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK-AAKVIPI 167
           +  S +P  ++GLKK+  ++S   H S    V G+    G    GQLGLG+    +  P 
Sbjct: 33  VDLSTKPT-LNGLKKKAQKVSLVSHRSHGHVV-GQTLTIGTGDTGQLGLGEDIMDRARPA 90

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
             K++   G   + AA G   +  +T  GKV ++G    G LG           RST E 
Sbjct: 91  LVKID---GEIVQIAAGGM-HTACLTKDGKVFTFGCNDEGALG-----------RSTPEE 135

Query: 228 TPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGD-RAVDKMLFQEGNHARRPSLI 284
                  +  +K KI   +AG  H+A + ++G +Y +G  R  +  +  +    R P+ I
Sbjct: 136 EDCFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWGTFRDANGSIGLQTPKTRSPTPI 195

Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-----------IDVLHSP 331
             L      +V  G  H   LT  G++++ G+ + G LG  +           + +L +P
Sbjct: 196 VLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTRGGRKGLSLLLTP 255

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG------------------- 372
             V     ++    + T       GW   A    G I +WG                   
Sbjct: 256 AAVHCKLRKAKFTDVWTG------GWTSFAKTDTGDIYSWGLNNYFQIGFDDMVNRYVPD 309

Query: 373 ----------W----GGSHGTFSED--------GHSSGGQLGHGNDV--DYIHPTIVNFG 408
                     W    GG H T + D        G    G LG G++V  +   PT V   
Sbjct: 310 RCKSFKTDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEKSEPTAVTSL 369

Query: 409 ENVKALQVSCG 419
           ++VK   V+CG
Sbjct: 370 KDVKCSAVTCG 380


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2958 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3017

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3018 NGRLGLGLSSG-TIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3076

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3077 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG-- 323
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGS 3187

Query: 324  -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
               +V  + ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3188 EGCNVPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3232

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3233 --------RLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3271



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 180/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG   +E     V  S     +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3956 WGHNHRGQLG--GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4013

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   ++K  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4014 GRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4071

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G+     A G   S  +T  G++ +WG G  GRLGHG    
Sbjct: 4072 HGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD--- 4126

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L+  L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4127 ------SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4181 SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4240

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4241 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4280

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4281 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4314



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G +YA G    G+LG+  + G    P +I+ L   V++   + +G  H
Sbjct: 2996 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRH 3055

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3056 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3113

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+L+K L G +V   A G     +  
Sbjct: 3114 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3164

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3165 LTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3224

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3225 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3276

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3277 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3320



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 149/328 (45%), Gaps = 30/328 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 3014 GEATNGRLGLG-LSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGD 3072

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3073 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3131

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3132 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGG--- 3186

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3187 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3240

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3241 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3300

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAA 362
            QG   +         I  V+CG  H+ A
Sbjct: 3301 QGLEGQ--------KITRVACGSSHSVA 3320



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3068 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG-- 3185

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 3186 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3242

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + + G+VY +GD        Q+GN    
Sbjct: 3243 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3292

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3293 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3323



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 125/267 (46%), Gaps = 23/267 (8%)

Query: 62  PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           P++        +  LA    G H L L+  G V++ G  D G+LG  +   Y  EP  I 
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPKMIG 533

Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
                   K VV ++ G  +S+AIT DGELY WG+ + G+LG G    +  P+   V   
Sbjct: 534 TFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPM--VVTAF 591

Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            G+     A G    Q++AVT  G+V SWG G  G+LG G          S    TP+L+
Sbjct: 592 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 642

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           ++L+ + +     G   S  + ++G+VY +G     ++      H R P L+  L   + 
Sbjct: 643 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKV 702

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNEN 317
            +V  G  H   LT  GE+ +WGSN+ 
Sbjct: 703 VDVAVGSTHCLALTDDGEVLSWGSNDK 729



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 48/326 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C A     +  + C     L L+ +G VY+                 +L P+ I  L
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYK-----------STTLAPMLIHVL 481

Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++ +GE++ WG    G+LG G      +  P  +   +G  
Sbjct: 482 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--TTYLEEPKMIGTFNG-- 537

Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            KQA       A G   S A+T  G++ +WG G  GRLGHG          S  + TP +
Sbjct: 538 -KQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTTPMV 587

Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           +   +G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL  
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 647

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
            +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ +     +  VD   
Sbjct: 648 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD--- 704

Query: 348 TSIVLVSCGWKHTAAIS-EGKILTWG 372
                V+ G  H  A++ +G++L+WG
Sbjct: 705 -----VAVGSTHCLALTDDGEVLSWG 725



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 6/171 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E +  P+V +AF+   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 566 WGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 625

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG   + G     L       ++V++  G   S A+T DG++Y WGK  N +LG G  
Sbjct: 626 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 685

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             + +  P  ++ L G      A+G    +A+T  G+VLSWG+  + +L H
Sbjct: 686 --EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGS--NDKLQH 732



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 19/228 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P +   F      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 510 WGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVH-VACGSTYSAAITADGELYTWGR 568

Query: 98  NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            ++G+L  G SE+    +      GLK   V   +G   + A+T +G+++ WG    G+L
Sbjct: 569 GNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 628

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG + 
Sbjct: 629 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 686

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+L+  L+G KV   A G  H   + ++G V  +G
Sbjct: 687 HV---------RYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWG 725



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 21/244 (8%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2950 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3007

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GK+ + G   +GRLG G  S  +   R  +  +  +IK     KV + + G  H+  +  
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIK-----KVAVHSGG-RHAMALTV 3061

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+WG
Sbjct: 3062 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3121

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILT 370
              E G LG G       P+ V+              ++ V+CG +     A   EG + +
Sbjct: 3122 LGEYGRLGHGDNTTQLRPKLVKVLLGH--------RVIQVACGSRDAQTLALTDEGFVFS 3173

Query: 371  WGWG 374
            WG G
Sbjct: 3174 WGDG 3177



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 135/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3951 GTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATG 4009

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 4070 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4120

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4121 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4181 SDGCKIPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4226

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4227 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4259



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 38/248 (15%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P++I    G +    V   A 
Sbjct: 499 LALSSNGEVFSWGCGDGGRLGHGD---------TTYLEEPKMIGTFNGKQAGKHVVHVAC 549

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P +++        +V CG     T 
Sbjct: 550 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +T  G++++WG  + G LG G  D   +P+ V+              IV V CG + + 
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD--------LDIVKVCCGSQFSV 661

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++ +G++ TWG G +             +LGHG D    +P +++  +  K + V+ G 
Sbjct: 662 ALTKDGQVYTWGKGDNQ------------RLGHGTDEHVRYPKLLDSLQGKKVVDVAVGS 709

Query: 421 NHTGALLE 428
            H  AL +
Sbjct: 710 THCLALTD 717



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 679

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  +  L+ K+VV ++ G  H  A+T DGE+  WG N   Q    L
Sbjct: 680 LGHGTDEHVRY---PKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTL 736

Query: 156 GLGKKAAKVIP 166
              KK  K +P
Sbjct: 737 FSNKKQPKALP 747



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 17/124 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G H   L+S GE+++WG  + G LG G    L  P+ + G F+     Q    +V V+CG
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMI-GTFNGK---QAGKHVVHVACG 550

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             ++AAI+ +G++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 551 STYSAAITADGELYTWGRGNY------------GRLGHGSSEDQTTPMVVTAFKGLKVVD 598

Query: 416 VSCG 419
           V+CG
Sbjct: 599 VACG 602



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 36/232 (15%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY-TPRLIKELEGVKVKIAAAGFLHSAC 252
            G G +  WG    G+LG G E + +    ST    T R ++ + G +   A         
Sbjct: 3949 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTA------ 4001

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGE 308
               +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE
Sbjct: 4002 ---DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4058

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
            +Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G+
Sbjct: 4059 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD--------IAAGGAHSACITASGE 4110

Query: 368  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            + TWG G              G+LGHG+  D + P +V+  +  + + V+CG
Sbjct: 4111 LFTWGKG------------RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 4150


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
           + G    G LG G  +S   P          + +L+ G G H + +T  G VY+ G N +
Sbjct: 44  VMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            QLG + +   +L P ++S   + K+ + ++ G HHS  +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162

Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             A +  PIP KV  CL        A G   S+AV   G+V +WG  G+G+LG G     
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S ++ TP  I  L+G++V+    G+ H+  + + G +Y +G  +  ++    GN 
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269

Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
           + +   +  +   E +V    C   HT    S  G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 136/311 (43%), Gaps = 46/311 (14%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
            G   L+LT+   V+  G N  G LG  +     LEP RI  L  K +V +S G   H  
Sbjct: 29  AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-LEPRRIDMLSGKRIVSLSYGSGPHVV 87

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
            +T DGE+Y WG N+  QLG G     + P        + +  K+A   A G   S+ +T
Sbjct: 88  IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
             G+V +WG   SG++G G          + ++  PR +   L+   V   A G + S  
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
           + +NG VY +G     ++      +   P  I+ L     E+VVCG  HT  LT  G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254

Query: 311 TWGSNENGCLGIGS-------IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            WG+N  G LG G+       + V+   ER+               + + +C   HT+A 
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVDKERI---------------VEIAACHSSHTSAA 299

Query: 364 --SEGKILTWG 372
               G++  WG
Sbjct: 300 KSQSGQVYMWG 310



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 112/265 (42%), Gaps = 47/265 (17%)

Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           Q  L F Q   V G G          +V   G   SG LG G   SIL          PR
Sbjct: 15  QEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIL---------EPR 65

Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
            I  L G + V ++     H   +  +G VY +G  A  ++     N A  P     +LI
Sbjct: 66  RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           +K   S  V CG +H+ VLT  GE+Y WG N +G +G GS      P +V          
Sbjct: 126 NKKAIS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNK--- 180

Query: 345 QICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
               +++ ++CG   + A +  G++  WG+ G+            GQLG G+  +   P 
Sbjct: 181 ----TVIGIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQPTPC 224

Query: 404 IVNFGENVKALQVSCGFNHTGALLE 428
            +   + ++  QV CG+ HT AL +
Sbjct: 225 RIAALQGIRVEQVVCGYAHTLALTD 249



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 33/292 (11%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
           +T + E+++ G NS+G LG G   A+ I  P +++ LSG      + G     V VT  G
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTGD--AQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V SWG     +LG+G  +  L    S  + +  LI +    K    A G  HS  +  +
Sbjct: 94  EVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAISVACGSHHSMVLTCD 145

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
           G VY +G     ++      +   P  ++    ++ V+   CG   +  +   GE+Y WG
Sbjct: 146 GEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWG 205

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
            N NG LG+GS     +P R+        V+Q       V CG+ HT A+++  ++ + W
Sbjct: 206 YNGNGQLGLGSSGNQPTPCRI-AALQGIRVEQ-------VVCGYAHTLALTDEGVM-YAW 256

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G           +S GQLG GN  +  +P  V   +       +C  +HT A
Sbjct: 257 GA----------NSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLGS  ++  P   +A +   ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+++   K+ +V+I+  +  H S+A +  G++YMWG+   GQ      
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315

Query: 161 AAKVIPIPTKVECLSGIF 178
            + + P  T   C   +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332


>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 1401

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  +R+ PV         + A+A GG H+L L   G V+A G N +GQ
Sbjct: 91  WGDNYYGQLGDGTTTNRYTPVQVQNLT--GVVAIAAGGGHSLALKSDGTVWAWGYNGYGQ 148

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I     P+++  L   V   +    HS A+  DG ++ WG N  GQLG G    
Sbjct: 149 LG-DGTITNRTTPVQVKNLTGVVAVAAG-GGHSLALKSDGTVWAWGYNGYGQLGDGTTMN 206

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V+ L+G+     A G   S+A+   G V +WG  G G+LG G          
Sbjct: 207 RYTPV--QVQNLTGVV--AIAAGSSHSLALKSDGTVWAWGNNGYGQLGDG---------T 253

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  ++ L  V V IAA G  HS  +  +G V+ +G     ++      +   P 
Sbjct: 254 TTNRTTPVRVQGLTDV-VAIAA-GNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPV 311

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            +  L     +  GG H+  L S G ++ WG+N+ G LG G+    H+P +V G
Sbjct: 312 QVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNNDWGELGDGTRTDRHTPVQVSG 365



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 155/339 (45%), Gaps = 43/339 (12%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A+  G  ++L L   G V+A G N +GQLG          P+++  L   VV I+ G  H
Sbjct: 71  AVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTN-RYTPVQVQNLTG-VVAIAAGGGH 128

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+  DG ++ WG N  GQLG G    +  P+  +V+ L+       A G   S+A+  
Sbjct: 129 SLALKSDGTVWAWGYNGYGQLGDGTITNRTTPV--QVKNLT--GVVAVAAGGGHSLALKS 184

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG  G G+LG G          + + YTP  ++ L GV V IAA G  HS  + 
Sbjct: 185 DGTVWAWGYNGYGQLGDG---------TTMNRYTPVQVQNLTGV-VAIAA-GSSHSLALK 233

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
            +G V+ +G+    ++      +   P  +  L     +  G  H+  L S G ++TWG 
Sbjct: 234 SDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGW 293

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGW 373
           N +G LG G+    ++P +VQ            T +V ++ G  H+ A+ S+G +  W W
Sbjct: 294 NYSGQLGDGTTTNRYTPVQVQN----------LTGVVAIAAGGGHSLALKSDGTV--WAW 341

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV---NFGE 409
                     G++  G+LG G   D   P  V   N G+
Sbjct: 342 ----------GNNDWGELGDGTRTDRHTPVQVSGLNLGQ 370



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 153/354 (43%), Gaps = 61/354 (17%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A GGA +L +   G V+A G                  P+ +  L   VV +  G  +S
Sbjct: 37  IAAGGARSLAIKSDGTVWAWGGT----------------PVPVQNLTG-VVAVEAGSFYS 79

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N  GQLG G    +  P+  +V+ L+G+     A G   S+A+   
Sbjct: 80  LALKSDGTVWAWGDNYYGQLGDGTTTNRYTPV--QVQNLTGVV--AIAAGGGHSLALKSD 135

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG  G G+LG G           T+  TP  +K L    V   AAG  HS  +  
Sbjct: 136 GTVWAWGYNGYGQLGDG---------TITNRTTPVQVKNL--TGVVAVAAGGGHSLALKS 184

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +G V+ +G     ++   +G    R  P  +  L     +  G  H+  L S G ++ WG
Sbjct: 185 DGTVWAWGYNGYGQL--GDGTTMNRYTPVQVQNLTGVVAIAAGSSHSLALKSDGTVWAWG 242

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
           +N  G LG G+     +P RVQG           T +V ++ G +H+ A+ S+G + TWG
Sbjct: 243 NNGYGQLGDGTTTNRTTPVRVQG----------LTDVVAIAAGNEHSLALKSDGTVWTWG 292

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           W  S            GQLG G   +   P  V     V A  ++ G  H+ AL
Sbjct: 293 WNYS------------GQLGDGTTTNRYTPVQVQNLTGVVA--IAAGGGHSLAL 332



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 55/302 (18%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V+I+ G   S AI  DG ++ WG                 P+P  V+ L+G+   +A  G
Sbjct: 35  VKIAAGGARSLAIKSDGTVWAWGGT---------------PVP--VQNLTGVVAVEA--G 75

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S+A+   G V +WG    G+LG G          +T+ YTP  ++ L GV V IAA 
Sbjct: 76  SFYSLALKSDGTVWAWGDNYYGQLGDG---------TTTNRYTPVQVQNLTGV-VAIAAG 125

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G  HS  +  +G V+ +G     ++      +   P  +  L     V  GG H+  L S
Sbjct: 126 GG-HSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAVAAGGGHSLALKS 184

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-S 364
            G ++ WG N  G LG G+    ++P +VQ            T +V ++ G  H+ A+ S
Sbjct: 185 DGTVWAWGYNGYGQLGDGTTMNRYTPVQVQN----------LTGVVAIAAGSSHSLALKS 234

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +G +  W WG        +G+   GQLG G   +   P  V    +V A  ++ G  H+ 
Sbjct: 235 DGTV--WAWG-------NNGY---GQLGDGTTTNRTTPVRVQGLTDVVA--IAAGNEHSL 280

Query: 425 AL 426
           AL
Sbjct: 281 AL 282


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 4216 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4273

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4274 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4331

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4332 HGNRSP--CDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4386

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4387 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4441 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4500

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4501 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4540

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4541 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 3222 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3281

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP +V  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3282 NGRLGLGLSSGTV-PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3340

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3341 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3391

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3392 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3451

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3452 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3496

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3497 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3535



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 170/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 3260 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3319

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3320 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3377

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3378 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3428

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3429 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3488

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3489 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGK--------KIVHVAVGALHCLAVTDSGQVY 3540

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V+  E  K  +V+CG +H+ A
Sbjct: 3541 AWG---------DNDH---GQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3584



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3332 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3391

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3392 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3449

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3450 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3506

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3507 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3555

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3556 TVNRKPTLVHGLEGQKITRVACGSSHSVAWTT 3587



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 765 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISTFSGKQAGKHVVHIACGSTY 823

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 824 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 881

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 882 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 932

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 933 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 992

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 993 SWGSNDQ 999



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 751

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISTFSG 807

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 808 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 855

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 856 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 915

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 916 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 974

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 975 -------VAAGSTHCLALTEDSEVHSWG 995



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V S F      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 780 WGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 838

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 839 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 897

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 898 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 955

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 956 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 135/302 (44%), Gaps = 45/302 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 3214 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3271

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVK-----KVAVHSGGR-HATALTV 3325

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 3326 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3385

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILT 370
              E G LG G       P+ V+              ++ V+CG +     A   EG + +
Sbjct: 3386 LGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLVFS 3437

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTG 424
            WG     G F        G+LG G           N  +N++ L      Q+ CG   + 
Sbjct: 3438 WG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSL 3479

Query: 425  AL 426
            AL
Sbjct: 3480 AL 3481



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 4211 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4269

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4270 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4329

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4330 LGHGNRSPC---------DRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYG 4380

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4381 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4441 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4486

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4487 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4519



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 836 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 895

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 896 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 954

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 955 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 769 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISTFSGKQAGKHVVHIAC 819

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 820 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 879

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 880 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 928

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 929 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 976

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 977 AGSTHCLALTE 987



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 890  WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 949

Query: 103  L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 950  LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 1006

Query: 160  KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
            +  K  P PT    L G+ TK     A G  QS A
Sbjct: 1007 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 1036



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 4209 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4259

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4260 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4319

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++        D        V+ G  H+A ++  G +
Sbjct: 4320 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVAD--------VAAGGAHSACVTAAGDL 4371

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4372 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4410


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 47/341 (13%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQIS 129
           S++A+A G  HTLFL + G V++ G N+ G+LG    +   +++ P+ +SG    +VQI+
Sbjct: 69  SVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSG-GVNIVQIA 127

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  H+ A+  DG L+ WG NS+GQL L         IP +V  L+   T Q A G + +
Sbjct: 128 AGRAHNMAVADDGRLFAWGSNSHGQLALPSNITST-DIPKRVVSLTE--TVQVACGTDHT 184

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G++  WG    GR+                 Y P+ I+    + V    AG  +
Sbjct: 185 IAIVESGRIFVWGLQPDGRVL----------------YAPKEIEFFMALPVVQVNAGSDY 228

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
              +  +G ++++G     ++   +      P+ ++ L +S  VV   CG  HT  LT  
Sbjct: 229 YVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTL-HSLNVVHVACGHSHTVALTHE 287

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE 365
           G L+  GS+  G LG G         +V    +   V ++  T +  V+CG  HT A++ 
Sbjct: 288 GRLFVCGSDSCGQLGSG--------RKVPSQNTMLAVTEMLGTHVTRVACGRCHTLALAG 339

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
           GK+  +G             +S GQLG GN    + P  ++
Sbjct: 340 GKMYAFGL------------NSSGQLGSGNVRSQVTPRPID 368



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 49/299 (16%)

Query: 140 VDGELYMWGKNSNGQLG----LGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVA 191
           V  +LY +G   +GQLG    L      ++  P  V        G+  +  A G   ++ 
Sbjct: 23  VRRQLYAFGYGGDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLF 82

Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +   GKV S G+  +G LG G  QE S   +        P L+    GV +   AAG  H
Sbjct: 83  LADDGKVWSCGSNENGELGRGGCQEGSFTIY--------PVLLSG--GVNIVQIAAGRAH 132

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +  + ++GR++ +G  +  ++           P  +  L  + +V CG  HT  +   G 
Sbjct: 133 NMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTETVQVACGTDHTIAIVESGR 192

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           ++ WG   +G        VL++P+ ++  F   PV Q       V+ G  +  A++  G 
Sbjct: 193 IFVWGLQPDG-------RVLYAPKEIEF-FMALPVVQ-------VNAGSDYYVALTVSGA 237

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +  WG             +  GQLG  ++ +   P  V    ++  + V+CG +HT AL
Sbjct: 238 MFVWG------------SNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVAL 284



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ +YG+LG    + R  P   +     ++  +ACG +HT+ LT  G ++  G +  G
Sbjct: 240 VWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCG 299

Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG    +      L ++  L   V +++ G  H+ A+   G++Y +G NS+GQLG G  
Sbjct: 300 QLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLALA-GGKMYAFGLNSSGQLGSGNV 358

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            ++V P P  ++ L+ + +  A  G++QS  +
Sbjct: 359 RSQVTPRP--IDALTDVVSVFA--GWDQSFCI 386



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 29/164 (17%)

Query: 273 QEGNHARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            +GN  + P ++   P S +      +  G  HT  L   G++++ GSNENG LG G   
Sbjct: 47  DDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQ 106

Query: 327 VLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
                   +G F+  PV      +IV ++ G  H  A+++ G++  WG   SHG  +   
Sbjct: 107 --------EGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLFAWG-SNSHGQLALPS 157

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           + +            I   +V+  E V   QV+CG +HT A++E
Sbjct: 158 NITSTD---------IPKRVVSLTETV---QVACGTDHTIAIVE 189


>gi|242021219|ref|XP_002431043.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
           corporis]
 gi|212516272|gb|EEB18305.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
           corporis]
          Length = 369

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 163/338 (48%), Gaps = 41/338 (12%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +G GD G+LGLG S+  R +P +    E  ++  +  GG HT+ L++ G VY  G +D G
Sbjct: 46  FGQGDVGQLGLGTSITERGKPSLVKTLE--NIVDVCAGGMHTVCLSKDGVVYTFGCDDEG 103

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
            LG       S EP ++  L    VQI+ G  HS+A+  DG ++ WG  ++S+G +GL  
Sbjct: 104 ALGREATDENSFEPGQVC-LPGSAVQITAGDSHSAALLDDGRVFAWGSFRDSHGAMGLTV 162

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +  PI    + L      + A G +  V +T  G++ + G    G+LG         
Sbjct: 163 QGKEKRPI----QLLQDKVITKIASGADHLVMLTFDGQLYTCGCAEQGQLG--------- 209

Query: 220 FLRSTSEYTPRLIKE------LEGVKV--KIAAAGFL--HSACIDENGRVYIFGDRAVDK 269
             R ++ ++ R  ++      L G  +  K +   F+  H+  +DENG+VY+ G +   +
Sbjct: 210 --RVSNRFSSRESRQGLSHLLLPGRILFNKRSKYDFIDHHTMALDENGKVYVLGRKDYGR 267

Query: 270 M-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           + L +    A+  +L+S L   E  ++ CG   +  +T  G  Y WG   NG LG+G  D
Sbjct: 268 LGLGKNCEDAKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGMGSNGQLGMGDDD 327

Query: 327 V-LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             +  P ++ G   E        ++ LVS G +HT  +
Sbjct: 328 SDIFEPSKILGKQLEGK------NVHLVSAGGQHTVLL 359



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 15/105 (14%)

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           +PSL+  L    +V  GG HT  L+  G +YT+G ++ G LG  + D        +  F 
Sbjct: 65  KPSLVKTLENIVDVCAGGMHTVCLSKDGVVYTFGCDDEGALGREATD--------ENSFE 116

Query: 340 ESPVDQICT--SIVLVSCGWKHTAA-ISEGKILTWG-WGGSHGTF 380
                Q+C   S V ++ G  H+AA + +G++  WG +  SHG  
Sbjct: 117 PG---QVCLPGSAVQITAGDSHSAALLDDGRVFAWGSFRDSHGAM 158



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 16/198 (8%)

Query: 127 QISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           +IS       +IT + G +  +G+   GQLGLG    +    P+ V+ L  I       G
Sbjct: 25  RISIVRDEKPSITKIPGLVLTFGQGDVGQLGLGTSITERGK-PSLVKTLENIV--DVCAG 81

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +V ++  G V ++G    G L  G+E++        + + P  +  L G  V+I  A
Sbjct: 82  GMHTVCLSKDGVVYTFGCDDEGAL--GREAT------DENSFEPGQVC-LPGSAVQI-TA 131

Query: 246 GFLHSACIDENGRVYIFGD--RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           G  HSA + ++GRV+ +G    +   M        +RP  + +     ++  G  H  +L
Sbjct: 132 GDSHSAALLDDGRVFAWGSFRDSHGAMGLTVQGKEKRPIQLLQDKVITKIASGADHLVML 191

Query: 304 TSGGELYTWGSNENGCLG 321
           T  G+LYT G  E G LG
Sbjct: 192 TFDGQLYTCGCAEQGQLG 209


>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
          Length = 531

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 128/269 (47%), Gaps = 17/269 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            K+  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
           TP  +  L G+ V     G+ H+  + + G +Y +G     ++     N+   P+  ++ 
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282

Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           K    E   C   HT    T GG +Y WG
Sbjct: 283 KERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +I+     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 36/318 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P     ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V +T   G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G ++ +G     ++      +   P  I+   +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHGMCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG G+  + + PT +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MV 281

Query: 409 ENVKALQV-SCGFNHTGA 425
           E  + +++ +C   HT A
Sbjct: 282 EKERVIEIAACHSTHTSA 299



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GEL+ WG N  G +G GS     +P ++        V       V ++CG   + A+
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRV-------VNIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ H
Sbjct: 197 LDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333


>gi|326444459|ref|ZP_08219193.1| regulator of chromosome condensation, rcc1 [Streptomyces
           clavuligerus ATCC 27064]
          Length = 416

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 166/364 (45%), Gaps = 39/364 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
           WG    G+LG  ++  R+ P    A  K  ++ LA G   T      + L     V+  G
Sbjct: 44  WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 103

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
            ND GQLG          P R+ GL   + Q++ G  H+ A+  +G+    ++ WG N +
Sbjct: 104 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 162

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG      K +P+P  V+ L+G  T   A G E S+A+  GG +++WG    G+LG+ 
Sbjct: 163 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 220

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
                   L ST    P  +K L    V+I AAG   S     +G +  +G+    ++  
Sbjct: 221 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 270

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  ++  P  ++ LP   +E +V GG H+  L S   +Y WGSN+ G L  G+I+    
Sbjct: 271 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 326

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHS 386
                 P +++        +  ++ G  +  A+++G     GWG    G  G+ + D H+
Sbjct: 327 ------PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHT 380

Query: 387 SGGQ 390
             GQ
Sbjct: 381 LVGQ 384



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 56/308 (18%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
           A+  D  +  WG N  GQLG      +  P P  +  L     +Q A G + +      V
Sbjct: 34  AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 91

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+     V +WG    G+LG G        L + +   P  +  L G+     AAG LH+
Sbjct: 92  ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 141

Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
             +  NG     V+ +GD     +  Q G+    P  +  +P        +  V  G  H
Sbjct: 142 LALRNNGDPQDGVWAWGD----NIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 196

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L  GG L  WG+N+ G LG  +I +   P  V+          + + +V ++ G   
Sbjct: 197 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVK---------NLTSPVVEIAAGCNF 247

Query: 360 T-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           + A +++G I  WG         E+GH   G+LG+G   + + P  V       A ++  
Sbjct: 248 SLARLADGTIKAWG---------ENGH---GELGNGQTANSLTPVSVTGLPPGSAERIVA 295

Query: 419 GFNHTGAL 426
           G NH+ AL
Sbjct: 296 GGNHSYAL 303


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 994  WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1051

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 1052 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAKDGKLG 1109

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 1110 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1164

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 1165 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 1219 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1278

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 1279 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 1318

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 1319 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1352



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79  GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
           GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 35  GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 94

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 95  ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 152

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
            G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 153 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 203

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 204 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 263

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
           TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 264 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGK--------KIVHVAVGALHCLAVTDSGQVY 315

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 316 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 43/343 (12%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +NG+L
Sbjct: 1   GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           GLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+LGH  
Sbjct: 61  GLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH-- 117

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                 F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     ++   
Sbjct: 118 ------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 170

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  +  +
Sbjct: 171 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 230

Query: 330 SP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 385
            P   ER+ G             +  + CG + + A+++ G + TWG G           
Sbjct: 231 IPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF-------- 271

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 272 ----RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 310



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 107 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 166

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
           LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 167 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 224

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 225 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 281

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                    P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 282 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 330

Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 331 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 362



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 150/335 (44%), Gaps = 28/335 (8%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
           G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 53  GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 112

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 113 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 171

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 172 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 225

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 226 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 280

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 281 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 340

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
           G   +         I  V+CG  H+ A +   + T
Sbjct: 341 GLEGQ--------KITRVACGSSHSVAWTTVDVAT 367



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 989  GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 1048 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGK 1107

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 1108 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1158

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 1159 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 1219 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 1264

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 1265 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 1297



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 987  GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 1037

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 1038 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1097

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  ++G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 1098 YSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 1149

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 1150 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 1188


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 39/330 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL LTE G VYA G N+ G
Sbjct: 103 MFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEG 162

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +  P+     + ++ Q+S G + S+A+TVDG L+MWG NS GQ+GL  K
Sbjct: 163 QLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGL--K 220

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +P +V    G      + G+  S  VT  G++ ++G    G+LG       L  
Sbjct: 221 NVPNVCVPHQVTV--GKPIAWISCGYYHSAFVTMEGELYTFGETECGKLG-------LPR 271

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
               +   P+L+  +    +++A  G  H+  + E   VY      FG   +   +F+  
Sbjct: 272 QLLMNHKVPQLVPGIPEKVIQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFIFETA 329

Query: 276 NHA-RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                 P    K+ Y   + CG  HT ++T  G +YT+G   +G LG+G  +        
Sbjct: 330 EPKILEPIKDQKIIY---ISCGENHTALITDVGLMYTFGDGRHGKLGLGMEN-------- 378

Query: 335 QGPFSESPVDQICTS-----IVLVSCGWKH 359
              F+   +  +C++     + LV+CG  H
Sbjct: 379 ---FTNQFIPTLCSNFLRFMVELVACGGCH 405



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 33/313 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           LACG  HT  +T    +Y  G N++GQLG+      S +P  +  LK E V+ +  G +H
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVS-KPTCVKALKPEKVKFAACGRNH 143

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAV 192
           +  +T +G++Y  G N+ GQLGLG    +    P    C   S    KQ + G   S A+
Sbjct: 144 TLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPI---CFFTSQHQLKQLSAGSNTSAAL 200

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G +  WG    G++G     ++    + T            G  +   + G+ HSA 
Sbjct: 201 TVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTV-----------GKPIAWISCGYYHSAF 249

Query: 253 IDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGE 308
           +   G +Y FG+    K+        NH + P L+  +P    +V CGG HT VLT    
Sbjct: 250 VTMEGELYTFGETECGKLGLPRQLLMNH-KVPQLVPGIPEKVIQVACGGGHTVVLTEKA- 307

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           +YT+G  + G LG+G+     +  ++  P  +         I+ +SCG  HTA I++ G 
Sbjct: 308 VYTFGLGQFGQLGLGTFIFETAEPKILEPIKDQ-------KIIYISCGENHTALITDVGL 360

Query: 368 ILTWGWGGSHGTF 380
           + T+G  G HG  
Sbjct: 361 MYTFG-DGRHGKL 372



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 170/374 (45%), Gaps = 45/374 (12%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           +R  P V  A       AL  G    + + ++G V+      FG+   +ENI     P +
Sbjct: 26  NRVSPAVFPAQTNPPRFALGMGEPEEV-VPDSGAVFT-----FGKTKFAENI-----PSK 74

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
                     ++ G  H++ IT + +LYM+G N+ GQLGLG ++   +  PT V+ L   
Sbjct: 75  FWFKNDIPTYLACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRS--TVSKPTCVKALKPE 132

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             K AA G   ++ +T  GKV + G    G+LG       LG     + + P      + 
Sbjct: 133 KVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLG-------LGDTEDRNTFHPICFFTSQH 185

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
            ++K  +AG   SA +  +G ++++GD +  ++  +   +   P  ++       + CG 
Sbjct: 186 -QLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWISCGY 244

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIVLVSC 355
           YH+  +T  GELYT+G  E G LG+    +++   P+ V G         I   ++ V+C
Sbjct: 245 YHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPG---------IPEKVIQVAC 295

Query: 356 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKAL 414
           G  HT  ++E  + T+G G              GQLG G  + +   P I+   ++ K +
Sbjct: 296 GGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFIFETAEPKILEPIKDQKII 343

Query: 415 QVSCGFNHTGALLE 428
            +SCG NHT  + +
Sbjct: 344 YISCGENHTALITD 357



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 14/75 (18%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P +CS F +  ++ +ACGG H +       V+AT     
Sbjct: 364 FGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMI-------VFAT----- 411

Query: 101 GQLGISENIGYSLEP 115
            +LGI+E I     P
Sbjct: 412 PRLGIAEEIDEMYSP 426


>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
 gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
          Length = 710

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 174/396 (43%), Gaps = 50/396 (12%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG LG+G+  L+ +  PV        ++  +A G  H+L LT TG V A G N +
Sbjct: 68  WGRDGYGALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYY 127

Query: 101 GQLG-------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G LG        ++N  Y    + +      V  ++    +S A+T  G +  WG N  G
Sbjct: 128 GVLGNGTKTDNSAQNDSYVPAAVHLPA-GTTVTSVAASSTYSLALTATGTVLAWGNNDQG 186

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG G      +P+P  +   + I    AA      +A+T  G VL+WG+ GSG+LG+G 
Sbjct: 187 QLGNGTNTDSYLPVPLALPAATTITAIAAA--TNHGLALTSNGTVLAWGSNGSGQLGNGN 244

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--DKML 271
                    +T+  TP  +    G  +   AA   HS  +   G V  +G   V    ++
Sbjct: 245 ---------TTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLPIPIV 295

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F  G                 V  G  H+  LTS G+++TWG+N  G LG G+     + 
Sbjct: 296 FPAGITI------------TAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTF----AN 339

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 390
             V  P S  P D   T+I  ++ G   + A+ S GK+L WG   ++G    +G  +G  
Sbjct: 340 SSVPVPASV-PTD---TTITAIAGGNAQSLALTSTGKLLAWGR-NNYGQVG-NGTRTGSW 393

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G G  V    P  V+   + K   ++ G+ H+ A+
Sbjct: 394 PGMGVSV----PVPVSLAADTKITTMAGGYYHSLAV 425



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G LG G+  +   PV  S     ++ A+A G A +L LT TG + A G N++GQ
Sbjct: 324 WGANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQ 383

Query: 103 LGISEN------IGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVD 141
           +G          +G S+ P+ +S     ++  ++ GY+HS A+  +
Sbjct: 384 VGNGTRTGSWPGMGVSV-PVPVSLAADTKITTMAGGYYHSLAVAAE 428


>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 747

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 173/394 (43%), Gaps = 64/394 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G++ +R  P+         +  L+ G +H + L   G  +  GLN  GQ
Sbjct: 224 WGDNRSGQLGDGTVTTRGNPLQVLGLT--GVVTLSAGASHCVALRSNGTAWTWGLNTMGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P ++ GL  +V+    G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 282 LGDGTTTQRSV-PAQV-GL-TDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTS 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++PI      LSG  T  A  GF+ S+ +   G V SWG    G+LG G          
Sbjct: 339 SLLPIQAG---LSGGITLVA--GFKHSLTLRADGTVWSWGDNVFGQLGDG---------- 383

Query: 223 STSEYTPRLIKELEGVKVKIA---------AAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
               Y PR+        V++A         A+G LHS   D  GRV+ +GD    ++   
Sbjct: 384 ---TYQPRM------SPVRVATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNG 434

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            G     P+L + L  +  VV G  HT VL     ++ WG N  G +G G+      P R
Sbjct: 435 IGADKLTPAL-TGLTGAVSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNANTSQPVR 493

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G           + I  +S G  H+ A+ ++G +  WG       F+       GQLG
Sbjct: 494 VLG----------LSGITAISAGAYHSLALRTDGTVWAWG-------FNRY-----GQLG 531

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           +G  VD   P  V     V A  ++ G +H+ AL
Sbjct: 532 NGGTVDQNQPVQVAGLSGVTA--IAAGHSHSLAL 563



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 163/370 (44%), Gaps = 51/370 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ + G+LG G    +  P +       S+ A   G  HT+ L     V+A G+N  G+
Sbjct: 423 WGDNEDGQLGNGIGADKLTPALTGLTGAVSVVA---GNRHTVVLKGDTTVWAWGVNSRGE 479

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G   N   S +P+R+ GL   +  IS G +HS A+  DG ++ WG N  GQLG G    
Sbjct: 480 VGDGTNANTS-QPVRVLGLSG-ITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVD 537

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LSG+     A G   S+A+ G G V +WG    G++G G          
Sbjct: 538 QNQPV--QVAGLSGV--TAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSG---------- 583

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA---- 278
            T+ +    ++ +    V    AG  HS  +  +G V+ +G     ++    GN A    
Sbjct: 584 -TNNWHILPVQAVGLSSVTAITAGGYHSLALRSDGTVWSWGYNGSGQL----GNGALASL 638

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +S L     +  G YH+  L S G +  WG N +G +G GS+   H P  V G  
Sbjct: 639 NAPGPVSNLTGVVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVAG-- 696

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
                    + +V V  G  H+ A+ S+G   TW WG           ++ GQLG G   
Sbjct: 697 --------MSGVVSVIAGDHHSMAMRSDGT--TWAWGA----------NTEGQLGDGTRN 736

Query: 398 DYIHPTIVNF 407
           D I P  V  
Sbjct: 737 DSIIPVRVEL 746



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 165/364 (45%), Gaps = 42/364 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+ + R  PV   A        +A G  H+++    G V++ G N+ GQ
Sbjct: 372 WGDNVFGQLGDGTYQPRMSPVRV-ATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDGQ 430

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    IG       ++GL   V  +  G  H+  +  D  ++ WG NS G++G G  A 
Sbjct: 431 LG--NGIGADKLTPALTGLTGAV-SVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNAN 487

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +V  LSGI    A  G   S+A+   G V +WG    G+LG+G          
Sbjct: 488 TSQPV--RVLGLSGITAISA--GAYHSLALRTDGTVWAWGFNRYGQLGNGG--------- 534

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +  +  P  +  L GV     AAG  HS  +  +G V+ +G     ++     N    P 
Sbjct: 535 TVDQNQPVQVAGLSGVTA--IAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNNWHILPV 592

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
               L     +  GGYH+  L S G +++WG N +G LG G++  L++P    GP S   
Sbjct: 593 QAVGLSSVTAITAGGYHSLALRSDGTVWSWGYNGSGQLGNGALASLNAP----GPVSN-- 646

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                T +V ++ G  H+ A+ S+G +  WG       F+ D     GQ+G G+  +   
Sbjct: 647 ----LTGVVSIAAGDYHSLALRSDGTVRAWG-------FNFD-----GQIGDGSLTNRHV 690

Query: 402 PTIV 405
           P +V
Sbjct: 691 PVMV 694



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 167/385 (43%), Gaps = 52/385 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG GS      PV         + ++A G AH+  L   G V+A G N + Q
Sbjct: 124 WGDNYSGQLGTGSTAVSAEPVQVQGLS--GVLSVASGFAHSAALRSDGTVWAWGDNRYRQ 181

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     G S  P+++ GL   V+ ++ G + + A+  DG ++ WG N +GQLG G    
Sbjct: 182 LG-PLTAGSSSVPVQVPGLGG-VIAVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTT 239

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  L+G+ T  A  G    VA+   G   +WG    G+LG G          
Sbjct: 240 RGNPL--QVLGLTGVVTLSA--GASHCVALRSNGTAWTWGLNTMGQLGDGT--------- 286

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P  +   +   V  A AG  HS  +  +G V+ +G    D    Q GN     S
Sbjct: 287 TTQRSVPAQVGLTD---VMAAVAGNYHSLAVRSDGAVWAWG----DNRYRQLGNGNMTSS 339

Query: 283 LI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           L+   + L     +V G  H+  L + G +++WG N  G LG G+     SP RV     
Sbjct: 340 LLPIQAGLSGGITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTL 399

Query: 340 ESPVDQICTSIVLVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
            +P          V+ G  H+    S G++ +WG        +ED     GQLG+G   D
Sbjct: 400 GNPG---------VASGQLHSVYRDSAGRVWSWG-------DNED-----GQLGNGIGAD 438

Query: 399 YIHPTIVNFGENVKALQVSCGFNHT 423
            + P +        A+ V  G  HT
Sbjct: 439 KLTPALTGL---TGAVSVVAGNRHT 460



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 136/308 (44%), Gaps = 37/308 (12%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  L+ G  H++ +   G V+A G N  GQLG +     S  P+++  L  + V ++
Sbjct: 49  RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLG-NGLFTNSPTPVKVKNLT-DAVAVA 106

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           +G  HS A+  DG ++ WG N +GQLG G  A    P+  +V+ LSG+ +   A GF  S
Sbjct: 107 SGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPV--QVQGLSGVLS--VASGFAHS 162

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+   G V +WG               LG L + S   P  +  L GV + +AA G   
Sbjct: 163 AALRSDGTVWAWGD---------NRYRQLGPLTAGSSSVPVQVPGLGGV-IAVAAGGNT- 211

Query: 250 SACIDENGRVYIFGDRAV----DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           +  +  +G V+ +GD       D  +   GN    P  +  L     +  G  H   L S
Sbjct: 212 TLALRADGTVWAWGDNRSGQLGDGTVTTRGN----PLQVLGLTGVVTLSAGASHCVALRS 267

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-S 364
            G  +TWG N  G LG G+      P +V             T ++    G  H+ A+ S
Sbjct: 268 NGTAWTWGLNTMGQLGDGTTTQRSVPAQVG-----------LTDVMAAVAGNYHSLAVRS 316

Query: 365 EGKILTWG 372
           +G +  WG
Sbjct: 317 DGAVWAWG 324



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 125/294 (42%), Gaps = 38/294 (12%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +  V ++S G +HS  +  DG ++ WG N  GQLG G       P P KV+ L+      
Sbjct: 49  RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNS--PTPVKVKNLTDAVA-- 104

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A G   S+A+   G V +WG   SG+LG G          +     P  ++ L GV   
Sbjct: 105 VASGDSHSLALRSDGTVWAWGDNYSGQLGTGS---------TAVSAEPVQVQGLSGVLS- 154

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
             A+GF HSA +  +G V+ +GD    ++       +  P  +  L     V  GG  T 
Sbjct: 155 -VASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVPVQVPGLGGVIAVAAGGNTTL 213

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L + G ++ WG N +G LG G++    +P +V G           T +V +S G  H  
Sbjct: 214 ALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLG----------LTGVVTLSAGASHCV 263

Query: 362 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
           A+ S G   TW            G ++ GQLG G       P  V   + + A+
Sbjct: 264 ALRSNGTAWTW------------GLNTMGQLGDGTTTQRSVPAQVGLTDVMAAV 305



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 152/361 (42%), Gaps = 44/361 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P      +   + A   G  H+L +   G V+A G N + Q
Sbjct: 274 WGLNTMGQLGDGTTTQRSVPAQVGLTD---VMAAVAGNYHSLAVRSDGAVWAWGDNRYRQ 330

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + N+  SL P++ +GL   +  ++ G+ HS  +  DG ++ WG N  GQLG G    
Sbjct: 331 LG-NGNMTSSLLPIQ-AGLSGGITLVA-GFKHSLTLRADGTVWSWGDNVFGQLGDGTYQP 387

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+      L        A G   SV     G+V SWG    G+LG+G  +  L    
Sbjct: 388 RMSPVRVATTTLG---NPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNGIGADKL---- 440

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                TP L      V V    AG  H+  +  +  V+ +G  +  ++      +  +P 
Sbjct: 441 -----TPALTGLTGAVSV---VAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNANTSQPV 492

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  G YH+  L + G ++ WG N  G LG G     + P +V G      
Sbjct: 493 RVLGLSGITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVAG------ 546

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                + +  ++ G  H+ A+  +G +  W            G++  GQ+G G +  +I 
Sbjct: 547 ----LSGVTAIAAGHSHSLALCGDGTVWAW------------GYNFDGQIGSGTNNWHIL 590

Query: 402 P 402
           P
Sbjct: 591 P 591


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4247 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4286

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4287 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3025 NGRLGLGLSSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3195 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3239

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3240 --------RLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTD 3278



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 125/247 (50%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +   + G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +VV G  H   LT   E+Y
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVY 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 40/354 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYSWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         I+ V+ G  H  A+++ G++ 
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--------IIHVAVGALHCLAVTDTGQVY 3283

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+
Sbjct: 3284 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 152/336 (45%), Gaps = 30/336 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 3021 GEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3079

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3080 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3138

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3139 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3193

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3194 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3248 HVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3307

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            QG   +         I  V+CG  H+ + +   + T
Sbjct: 3308 QGLEGQ--------KITRVACGSSHSVSWTTMDVAT 3335



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVSWTT 3330



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 150/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-------SDILG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   E  +D 
Sbjct: 656 QDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V  G  H  A++E  ++ +WG
Sbjct: 715 -------VVAGSTHCLALTEDSEVYSWG 735



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   + + G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV    AG  H   + E+  VY +G     +  D +
Sbjct: 696 EHV---------RYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTL 746

Query: 271 LFQEGNHARRPSLISK 286
              + +    P L SK
Sbjct: 747 RITKPDPTALPGLDSK 762



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3178

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3179 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3220

Query: 423  TGAL 426
            + AL
Sbjct: 3221 SLAL 3224



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G +Y +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4187 SDGCKVPMK---------IDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4232

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4233 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I  L G +    V   A 
Sbjct: 509 LALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPKMISALSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              IV VSCG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDIVKVSCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V 
Sbjct: 669 FSVALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGEKVIDVV 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A          
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA------- 4007

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4008 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G +
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------IAAGGAHSACITAAGDL 4117

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V   +  + + ++CG
Sbjct: 4118 YTWGKG------------RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +  G  H L LTE   VY+ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++      +P  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRITKP-----DPTALPGLDSKHIVGIACGPAQSFA 776


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 54/375 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CG  H + +T+ G  ++ G    G+LG       S  P  I   K   V+ I+ G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS-HPKLIKNFKGMNVELIACG 368

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC--LSGIFTKQAALGFEQS 189
            +HS A+T  G+LY WG  +     LG ++     IP KV C  + G+     + G   +
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKV-CGLMEGLRVSHVSCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG  S  +         TPR ++   G+K    A G  H
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCI---------TPREVETFNGLKTLKVACGVWH 478

Query: 250 SACIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--E 292
           +A + E             +G ++ +GD   DK     G++  R  P  I+ L      E
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDG--DKGKLGHGDNKPRLAPQCITALVDKSFSE 536

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           V C    T  LT+ G +YT GSN  G LG    + + SP  V+    +S V++I      
Sbjct: 537 VACSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGM-SPICVEDYLVDSTVEEI------ 589

Query: 353 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            SCG  H A + S  ++ TWG G              GQLGHG+  +   PT+V+   + 
Sbjct: 590 -SCGSHHVAVLTSRTEVYTWGKG------------ENGQLGHGDCENKCTPTLVDILRDK 636

Query: 412 KALQVSCGFNHTGAL 426
           +  ++ CG N + A+
Sbjct: 637 QVKRIVCGSNFSAAI 651



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 134/312 (42%), Gaps = 31/312 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+      P +   F+  +++ +ACG  H+  +T +G +Y    G    
Sbjct: 332 WGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG      + + P ++ GL +   V  +S G  H++ IT  G L+ +G  + G LG G
Sbjct: 392 GLLGHRSEASHWI-PKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
            ++  + P   +VE  +G+ T + A G   + AV                G + +WG G 
Sbjct: 451 DRSGCITP--REVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGD 508

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGHG     L          P+ I  L        A  +  +  +   GRVY  G  
Sbjct: 509 KGKLGHGDNKPRLA---------PQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSN 559

Query: 266 AVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++     N      +   L  S  EE+ CG +H  VLTS  E+YTWG  ENG LG G
Sbjct: 560 VYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHG 619

Query: 324 SIDVLHSPERVQ 335
             +   +P  V 
Sbjct: 620 DCENKCTPTLVD 631



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 121/279 (43%), Gaps = 50/279 (17%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E    +  +  + G   ++ VT  G+  SWG    GRLGHG E+ +          
Sbjct: 299 PKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV---------S 349

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNH---ARRP 281
            P+LIK  +G+ V++ A G  HS  +  +G +Y +GD A    L     E +H    +  
Sbjct: 350 HPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVC 409

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            L+  L  S  V CG +HT ++TS G L+T+G    G LG G      +P  V+  F+  
Sbjct: 410 GLMEGLRVSH-VSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVET-FNG- 466

Query: 342 PVDQICTSIVLVSCGWKHTAAISE--------------GKILTWGWGGSHGTFSEDGHSS 387
                    + V+CG  HTAA+ E              G + TWG G             
Sbjct: 467 ------LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDK----------- 509

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LGHG++   + P  +    +    +V+C +  T AL
Sbjct: 510 -GKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD G+LG G  + R  P   +A    S   +AC  A T+ LT TG VY  G N +GQ
Sbjct: 504 WGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQ 563

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     G S   +    +   V +IS G HH + +T   E+Y WGK  NGQLG G    
Sbjct: 564 LGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCEN 623

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           K    PT V+ L     K+   G   S A+
Sbjct: 624 KC--TPTLVDILRDKQVKRIVCGSNFSAAI 651



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 24/208 (11%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V+  + G  H+  + + G  + +G+ A  ++          P LI   
Sbjct: 298 TPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNF 357

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPV 343
                E + CG YH+C +TS G+LYTWG  +  +G LG  S      P++V G      V
Sbjct: 358 KGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRV 417

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                    VSCG  HTA I S G++ T+G     GTF        G LGHG+    I P
Sbjct: 418 SH-------VSCGPWHTALITSAGRLFTFG----DGTF--------GALGHGDRSGCITP 458

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V     +K L+V+CG  HT A++E +
Sbjct: 459 REVETFNGLKTLKVACGVWHTAAVVELM 486


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
           + G    G LG G  +S   P          + +L+ G G H + +T  G VY+ G N +
Sbjct: 44  VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            QLG + +   +L P ++S   + K+ + ++ G HHS  +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162

Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             A +  PIP KV  CL        A G   S+AV   G+V +WG  G+G+LG G     
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S ++ TP  I  L+G++V+    G+ H+  + + G +Y +G  +  ++    GN 
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269

Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
           + +   +  +   E +V    C   HT    S  G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 136/311 (43%), Gaps = 46/311 (14%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
            G   L+LT+   V+  G N  G LG  +     +EP RI  L  K +V +S G   H  
Sbjct: 29  AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
            +T DGE+Y WG N+  QLG G     + P        + +  K+A   A G   S+ +T
Sbjct: 88  IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
             G+V +WG   SG++G G          + ++  PR +   L+   V   A G + S  
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
           + +NG VY +G     ++      +   P  I+ L     E+VVCG  HT  LT  G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254

Query: 311 TWGSNENGCLGIGS-------IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            WG+N  G LG G+       + V+   ER+               + + +C   HT+A 
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVDKERI---------------VEIAACHSSHTSAA 299

Query: 364 --SEGKILTWG 372
               G++  WG
Sbjct: 300 KSQSGQVYMWG 310



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 112/265 (42%), Gaps = 47/265 (17%)

Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           Q  L F Q   V G G          +V   G   SG LG G   SI+          PR
Sbjct: 15  QEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSII---------EPR 65

Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
            I  L G + V ++     H   +  +G VY +G  A  ++     N A  P     +LI
Sbjct: 66  RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           +K   S  V CG +H+ VLT  GE+Y WG N +G +G GS      P +V          
Sbjct: 126 NKKAIS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNK--- 180

Query: 345 QICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
               +++ ++CG   + A +  G++  WG+ G+            GQLG G+  +   P 
Sbjct: 181 ----TVIGIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQPTPC 224

Query: 404 IVNFGENVKALQVSCGFNHTGALLE 428
            +   + ++  QV CG+ HT AL +
Sbjct: 225 RIAALQGIRVEQVVCGYAHTLALTD 249



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 33/292 (11%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
           +T + E+++ G NS+G LG G   A+ I  P +++ LSG      + G     V VT  G
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTGD--AQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V SWG     +LG+G  +  L    S  + +  LI +    K    A G  HS  +  +
Sbjct: 94  EVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAISVACGSHHSMVLTCD 145

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
           G VY +G     ++      +   P  ++    ++ V+   CG   +  +   GE+Y WG
Sbjct: 146 GEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWG 205

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
            N NG LG+GS     +P R+        V+Q       V CG+ HT A+++  ++ + W
Sbjct: 206 YNGNGQLGLGSSGNQPTPCRI-AALQGIRVEQ-------VVCGYAHTLALTDEGVM-YAW 256

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G           +S GQLG GN  +  +P  V   +       +C  +HT A
Sbjct: 257 GA----------NSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLGS  ++  P   +A +   ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+++   K+ +V+I+  +  H S+A +  G++YMWG+   GQ      
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315

Query: 161 AAKVIPIPTKVECLSGIF 178
            + + P  T   C   +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 72/420 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+GS E +    +  A + H ++++  G  ++L + + G ++  G N    
Sbjct: 10  WGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQRAT 69

Query: 103 LG-----ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQL- 155
           LG      SEN   +  P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ  
Sbjct: 70  LGHPAETKSENKTENT-PSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 128

Query: 156 -------GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                  G G+   + I IP +  C   +  +Q A G   SV +T  G V +WG      
Sbjct: 129 EEPERKDGTGRPLRRDIEIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG------ 180

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
                +    G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    
Sbjct: 181 -----QPWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYG 231

Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D
Sbjct: 232 QLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSD 291

Query: 327 VLHS--PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 383
                 P++VQ    E         IV VSCG  H+ A++ +G + ++G  G H      
Sbjct: 292 KSSKMVPQKVQLLAGE--------DIVQVSCGGTHSVALTRDGHMFSFG-RGDH------ 336

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNF--------------GENVKALQVSCGFNHTGALLEY 429
                G+LG+G  V    P  V                G  +  L V+CG  HT A++E+
Sbjct: 337 -----GRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKL-VACGGRHTLAIVEW 390



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 104/289 (35%), Gaps = 83/289 (28%)

Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
           +++WG+G  G+LG G                                            +
Sbjct: 7   IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66

Query: 215 SSILGFLRST-----SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            + LG    T     +E TP  +K L  VK+  AA G  H   +D+ GR Y +G     +
Sbjct: 67  RATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 126

Query: 270 MLFQE------GNHARR----PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
              +       G   RR    P   +      +V  GG H+ VLT  G ++TWG      
Sbjct: 127 CGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQP---- 182

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
              G I  +  P RVQG            ++ L++ G  H  A+ E   L W W      
Sbjct: 183 WPPGDIKQISVPVRVQG----------LENVRLIAVGAFHNLALQEDGTL-WAW------ 225

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               G++  GQLG G+      P  V    ++  + ++ G  H+ AL +
Sbjct: 226 ----GNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTD 270


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3711 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPIQLIGGEQTLFAVTADGKLYATGYGAG 3768

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3769 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3826

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 3827 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 3881

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3882 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3995

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 3996 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4035

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4036 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4069



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2772

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GK+ SWG G  G+L
Sbjct: 2773 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 2831

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 2832 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 2882

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2943 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2987

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 2988 --------RLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3026



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 2810

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2811 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 2868

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2980 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3031

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3032 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 148/327 (45%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G +++ G  D 
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 2828

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 2887

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 2996

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3056

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3057 GLEGQ--------KITRVACGSSHSVA 3075



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 2882

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 2997

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3046

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3078



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2814

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+++ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 2815 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 2874

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 2875 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 2926

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 2927 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 2968

Query: 423  TGAL 426
            + AL
Sbjct: 2969 SLAL 2972



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3706 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATG 3764

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3765 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3824

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G +Y +G     
Sbjct: 3825 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 3875

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3876 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 3936 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 3981

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3982 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4014



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 3704 GSGTIYGWGHNHRGQLGGIEGAKV---------KVPTPCEALAALRPIQLIGGEQTLFAV 3754

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3755 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3814

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G +
Sbjct: 3815 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------IAAGGAHSACITAAGDL 3866

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V   +  + + ++CG
Sbjct: 3867 YTWGKG------------RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 3905



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 71/187 (37%), Gaps = 42/187 (22%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N    +G+     +SL        
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA--VFSL-------- 406

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
                             + G+++ WG    G+LG G   +     P  +E L  +   +
Sbjct: 407 ------------------IFGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVK 446

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G + SVA+T  G+V SWG G + RLGHG E  +            R  K LEG++  
Sbjct: 447 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV------------RYPKLLEGLQAT 494

Query: 242 IAAAGFL 248
           +  A  L
Sbjct: 495 LPQANCL 501



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 414 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 473

Query: 103 L--GISENIGYSLEPLRISGLKKEVVQ 127
           L  G  E++ Y   P  + GL+  + Q
Sbjct: 474 LGHGTEEHVRY---PKLLEGLQATLPQ 497



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
           G+V+ +GD    K+     +  + P LI KL   +  +V CG   +  LT  G++Y+WG 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
            +N  LG G+ + +  P+ ++G  +  P     +         KH   I+ G   ++ W
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFAW 527



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 40/174 (22%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    + QI+        ++ +G +YM   NS+  +G+             V  
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGV-------------VAV 403

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
            S IF                 G+V SWG G  G+LG G          S    TP+LI+
Sbjct: 404 FSLIF-----------------GQVWSWGDGDYGKLGRGG---------SDGCKTPKLIE 437

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +L+ + V     G   S  + ++G+VY +G     ++      H R P L+  L
Sbjct: 438 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491


>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 570

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 151/387 (39%), Gaps = 33/387 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+      P+  S        A+  G  H+L LT  G V A G ND GQ
Sbjct: 62  WGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAGTVLAWGRNDSGQ 121

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S   +    +   V  ++ G+ HS A+T  G +  WG NS GQLG G   +
Sbjct: 122 LGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNSFGQLGDGTTVS 181

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  ++    G+     A G   S+A+T  G  L+WG   SG+LG G          
Sbjct: 182 SSTPVAVRLPV--GVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGT--------- 230

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + S  TP  ++   G  V   A G  HS  +   G    +G       L      +    
Sbjct: 231 TVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGAALAWGGN-FSGQLGDGTTVSSSTP 289

Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           ++  LP    V     G  H+  LTS G    WGSN +G LG G+      P  V  P  
Sbjct: 290 VVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNADSSVPIAVSLPAG 349

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    + +    G  + A  S G  L WG  G             GQLG G + D 
Sbjct: 350 A------TITAIAAHDGAHNLAITSTGAALAWGGNGD------------GQLGDGTNADS 391

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             P  V+         ++    H+ AL
Sbjct: 392 SVPIAVSLPAGTTITAIAASVEHSLAL 418



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 94/244 (38%), Gaps = 34/244 (13%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           E S +  G    L+WG    G+LG G          +T   TP  +    G       AG
Sbjct: 48  EPSPSAVGSDAFLAWGDNAFGQLGDGT---------TTGSNTPLPVSLPAGTDATAVVAG 98

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVL 303
             HS  +   G V  +G R     L      +    ++ +LP    V  V  G+ H+  L
Sbjct: 99  DFHSLALTSAGTVLAWG-RNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLAL 157

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           TS G +  WGSN  G LG G+     +P  V+ P        +  ++  V+ G  H+ A+
Sbjct: 158 TSTGVVLAWGSNSFGQLGDGTTVSSSTPVAVRLP--------VGVTVTAVAAGSGHSLAL 209

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
            S G  L WG       FS       GQLG G  V    P  V          V+ G +H
Sbjct: 210 TSVGAALAWG-----NNFS-------GQLGDGTTVSSSTPVAVRLPVGTTVTAVAGGSHH 257

Query: 423 TGAL 426
           + AL
Sbjct: 258 SLAL 261


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 170/369 (46%), Gaps = 47/369 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
           +++++ACG  H   +T+ G V++ G  + G+LG   +   S +P  I  L    V+ I+ 
Sbjct: 233 NVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVS-DPKIIDSLASTPVKTIAF 291

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTK-VECLSGIFTKQAALGFEQ 188
           G  ++ A++V GELY WG+  +  LG GK   +  P  P K +    GI   + A G   
Sbjct: 292 GAKYTCAVSVSGELYEWGEGIHS-LGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWH 350

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  ++  GK+ ++G G  G LGHG   S++          P+ ++ L G + K  A G  
Sbjct: 351 TAIISSLGKLYTYGYGTFGVLGHGDTHSVVH---------PKEVESLRGSRAKSVACGPW 401

Query: 249 HSACIDEN----------GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCG 296
           H+A I E           G+++ +GD    K+          P+ +  L   +  +V CG
Sbjct: 402 HTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCG 461

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              T VLT  G ++T GS E+G LG    D   S   V+GP     V  I       SCG
Sbjct: 462 MSLTAVLTITGVVFTIGSKEHGQLGNSRSDNT-SICMVEGPLKTEFVKDI-------SCG 513

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A ++  GK+ TWG G            + GQLG G+ VD   PT+V   E+ +   
Sbjct: 514 SSHVAVLTMNGKVFTWGKG------------TEGQLGLGDYVDRSSPTLVEALEDKQVDS 561

Query: 416 VSCGFNHTG 424
           ++C  N T 
Sbjct: 562 IACSSNFTA 570



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 130/304 (42%), Gaps = 53/304 (17%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++++WG         G   A  I +P  ++    +  +  A G + +  VT  G+V SWG
Sbjct: 198 DIFVWGDVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWG 257

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
               GRLGH    S+           P++I  L    VK  A G  ++  +  +G +Y +
Sbjct: 258 EENGGRLGHKTSDSV---------SDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEW 308

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNE 316
           G+  +  + F +    R P    KL  + +      + CG +HT +++S G+LYT+G   
Sbjct: 309 GE-GIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYGYGT 367

Query: 317 NGCLGIGSIDVLHSPERVQ---GPFSESPVDQICTSIVLVSCGWKHTAAISE-------- 365
            G LG G    +  P+ V+   G  ++S           V+CG  HTAAI E        
Sbjct: 368 FGVLGHGDTHSVVHPKEVESLRGSRAKS-----------VACGPWHTAAIVETSGTLKSS 416

Query: 366 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              GK+ TWG  G            GG+LGH N    + PT V    +    QVSCG + 
Sbjct: 417 APGGKLFTWGDAG------------GGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSL 464

Query: 423 TGAL 426
           T  L
Sbjct: 465 TAVL 468



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 39/335 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG  + +S   P +  +     +K +A G  +T  ++ +G +Y    G++  
Sbjct: 256 WGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHSL 315

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G  G ++       P ++        V++I+ G  H++ I+  G+LY +G  + G LG G
Sbjct: 316 G-FGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHG 374

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
              + V P   +VE L G   K  A G   + A+            GGK+ +WG  G G+
Sbjct: 375 DTHSVVHP--KEVESLRGSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGK 432

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH  + S L          P  ++ L        + G   +A +   G V+  G +   
Sbjct: 433 LGHTNKKSKL---------VPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHG 483

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN     + I       K  + +++ CG  H  VLT  G+++TWG    G LG+
Sbjct: 484 QL----GNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGL 539

Query: 323 GSIDVLHSPERVQGPFSESPVDQI-CTS-IVLVSC 355
           G      SP  V+    +  VD I C+S    V+C
Sbjct: 540 GDYVDRSSPTLVEA-LEDKQVDSIACSSNFTAVTC 573



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 20/213 (9%)

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           G + +T+   PRL+K  + + V+  A G  H+A + + G+V+ +G+    ++  +  +  
Sbjct: 213 GHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSV 272

Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P +I  L  +  + +  G  +TC ++  GELY WG   +  LG G      SP     
Sbjct: 273 SDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHS-LGFGKNQCQRSPWFPHK 331

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
             S S  D I  S++ ++CG  HTA IS  GK+ T+G+G    TF        G LGHG+
Sbjct: 332 LISTS--DGI--SVLKIACGQWHTAIISSLGKLYTYGYG----TF--------GVLGHGD 375

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               +HP  V      +A  V+CG  HT A++E
Sbjct: 376 THSVVHPKEVESLRGSRAKSVACGPWHTAAIVE 408


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 1550 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1607

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 1608 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 1665

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 1666 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1720

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 1721 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 1775 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1834

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 1835 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 1874

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 1875 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1908



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 554 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 613

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
           NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 614 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 672

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 673 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
           +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 724 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 783

Query: 326 DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
           +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 784 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 828

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                   +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 829 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 867



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79  GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
           GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 592 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 651

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 652 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 709

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
            G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 710 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 760

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 761 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 820

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
           TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 821 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 872

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 873 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 916



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 664 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
           LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 724 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 781

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 782 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 838

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                    P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 839 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 887

Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 888 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 919



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 150/335 (44%), Gaps = 28/335 (8%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
           G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 610 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 670 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 728

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 729 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 782

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 783 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 837

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 838 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 897

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
           G   +         I  V+CG  H+ A +   + T
Sbjct: 898 GLEGQ--------KITRVACGSSHSVAWTTVDVAT 924



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 546 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 603

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
           GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 655

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
             +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 656 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 715

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
           WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 716 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 767

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
            +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 768 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 809

Query: 423 TGAL 426
           + AL
Sbjct: 810 SLAL 813



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1603

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 1604 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 1663

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 1664 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1714

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 1715 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 1775 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 1820

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 1821 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 1853



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 1543 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 1593

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 1594 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1653

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 1654 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 1705

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 1706 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 1744


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 306 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 363

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 364 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 421

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 422 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 476

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 477 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 531 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 590

Query: 333 RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
           +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 591 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 630

Query: 392 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G G       P +V   +  K  +V+CG  HT A
Sbjct: 631 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 664



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
           G +Y WG N  GQLG G + AKV                                     
Sbjct: 301 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 359

Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                         +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 360 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 419

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 420 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 470

Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 471 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530

Query: 325 IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
            D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 531 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 576

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                  +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 577 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 609



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +++  G G +  WG    G+LG  + + +       +  T R ++ + G +   A     
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA----- 348

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLT 304
               +  +G++Y  G  A  ++          P+L+  + +       V  GG H   L+
Sbjct: 349 ----VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS 404

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           S GE+Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++
Sbjct: 405 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVT 456

Query: 365 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             G + TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 457 AAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 500


>gi|456861134|gb|EMF79839.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           weilii serovar Topaz str. LT2116]
          Length = 506

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 138/299 (46%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +    +   + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLIPGIDDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S+ P+ + GL+ +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANNLNADSFSMNPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A       P KVE LSGI  KQ A G +  +A+   GK+ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L  +      AG   S  I ++G V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   ++V+   CG  H  VL   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTQKVYEPNKAVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 159/371 (42%), Gaps = 50/371 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY TG N+FGQLG   + G     + +     + +  I    ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSIRNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
           S AI  +G +Y WG N+ GQLG+G         + A    P PT +  +        A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLIPGIDDAV--MGAYG 246

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
           F  ++ +   G V+++G    G+LG+G  +     L + S    P  +  L  V   I  
Sbjct: 247 FNHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMNPVAVVGLRDVIQVI-- 299

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
           AG  HSA + ENG VY++G      +        N A+  P  +  L   +++  G  H 
Sbjct: 300 AGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW--- 357
             L S G++Y+WG N +G LGIG            G  + +P+     +I+  S  W   
Sbjct: 360 LALASDGKIYSWGLNASGQLGIGG----------NGSPNPTPIPTQVLNILNASSVWAGG 409

Query: 358 -KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            +  + +  G++  WG          +G+++   +G  N      P     G +   +  
Sbjct: 410 TQSFSILKSGEVKGWG---------ANGNTANLAIGETNTQKVYEPNKAVVGID-DVIHF 459

Query: 417 SCGFNHTGALL 427
            CG  H   LL
Sbjct: 460 GCGATHNFVLL 470



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
             IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+  +   P L
Sbjct: 178 RNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
           I  ++     + A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 IPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMNPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +   +    +P +V+G      
Sbjct: 292 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEG------ 345

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                + I  ++ G  H  A+ S+GKI +WG   S
Sbjct: 346 ----LSGIKQIANGRDHILALASDGKIYSWGLNAS 376



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L     ++  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P+    L       +  G   S +I   GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+   + +  P K   + GI        G   +  + G G++  WG    G LG 
Sbjct: 434 AIGETNTQKVYEPNK--AVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488


>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
           musculus]
 gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
          Length = 651

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  T+TG VYA G N+ G
Sbjct: 1   MFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEG 60

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +   +        + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K
Sbjct: 61  QLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDK 120

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +   IP     E   G      + G+  S  VT  G++ ++G   +G+LG   E  +L  
Sbjct: 121 SNVCIP----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE--LLMN 174

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
            RS     P+ +  +    +++A  G  H+  + E   VY      FG   +   LF+  
Sbjct: 175 HRS-----PQRVLGIPERVIQVACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE-- 225

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                P +I ++   +   + CG  HT ++T  G LYT+G   +G LG+G
Sbjct: 226 --TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 273



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 138/286 (48%), Gaps = 34/286 (11%)

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G   
Sbjct: 1   MFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNN 58

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD 
Sbjct: 59  EGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGDN 110

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ + 
Sbjct: 111 SEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE 170

Query: 326 DVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
            +++  SP+RV G         I   ++ V+CG  HT  ++E  +  +G G         
Sbjct: 171 LLMNHRSPQRVLG---------IPERVIQVACGGGHTVVLTEKVVYAFGLG--------- 212

Query: 384 GHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                GQLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 213 ---QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 255



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 150/334 (44%), Gaps = 46/334 (13%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHHSSAITVDGELYMWGKNSNGQ 154
           G N++GQLG+       ++P  I  LK E V+++  G +H+   T  G +Y  G N+ GQ
Sbjct: 3   GSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 61

Query: 155 LGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           LGLG    +     I   T  + +     KQ + G   S A+T  GK+  WG    G++G
Sbjct: 62  LGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSAALTEDGKLFMWGDNSEGQIG 116

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              +S++           P  +    G  +   + G+ HSA +  +G +Y FG+    K+
Sbjct: 117 LEDKSNVC---------IPHEVTV--GKPISWISCGYYHSAFVTMDGELYTFGEPENGKL 165

Query: 271 -LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L  E   NH R P  +  +P    +V CGG HT VLT    +Y +G  + G LG+G+  
Sbjct: 166 GLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEKV-VYAFGLGQFGQLGLGTFL 223

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 385
              S  ++     E   DQ    I  +SCG  HTA ++E G + T+G  G HG       
Sbjct: 224 FETSEPKI----IERIKDQ---KICHISCGENHTALMTELGLLYTFG-DGRHGKLG---- 271

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                LG  N  +   PT+ +         ++CG
Sbjct: 272 -----LGMENFTNQFFPTLCSNFLRFAVQLIACG 300



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 42/238 (17%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           +G+   G+LG G +++I+          P  IK L+  KVK+AA G  H+    + G VY
Sbjct: 2   FGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAACGRNHTLVSTDTGGVY 52

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSN 315
             G     ++    G+   R +    + ++     +++  G   +  LT  G+L+ WG N
Sbjct: 53  AAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 110

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWG 374
             G +G+     +  P  V           +   I  +SCG+ H+A ++ +G++ T+G  
Sbjct: 111 SEGQIGLEDKSNVCIPHEVT----------VGKPISWISCGYYHSAFVTMDGELYTFG-- 158

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGALLEYV 430
                         G+LG  N++   H  P  V  G   + +QV+CG  HT  L E V
Sbjct: 159 ----------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVVLTEKV 205



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)

Query: 24  LGICKRWI--------SSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLK 74
           LGI +R I        +  L  +    +G G +G+LGLG+ L     P +    +   + 
Sbjct: 182 LGIPERVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKIC 241

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
            ++CG  HT  +TE G +Y  G    G+LG+  EN      P   S   +  VQ+
Sbjct: 242 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQL 296



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 262 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 307


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 141/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  IS L    
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+     S +    P      D+I   
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN----KSNQSYPAPVVVEK-DRI--- 286

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 287 IEIAACHLAHTSAAKTQGGHVYMWG 311



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 174 VTGCLQNKVV-------VNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLG 214

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  ++  + ++  +V+CG+ HT  L +
Sbjct: 215 LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTD 250



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 47/298 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           +Y WG N NG LG+GS     +P R+      S +  I   +  V+CG+ HT  ++ EG+
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRI------SALQGI--RVQRVACGYAHTLVLTDEGQ 253

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           +  WG             +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 254 VYAWG------------ANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSA 299



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   SA +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2947 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3006

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3007 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3065

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3066 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3176

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3177 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3221

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3222 --------RLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3260



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 43/357 (12%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   ++K  V +++G  
Sbjct: 3980 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 4037

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GE+Y WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 4038 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4095

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L+  L+G +V   A  +G   + 
Sbjct: 4096 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4146

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAV 4206

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
            YTWG  +   LG GS D +  P +VQG   +         ++ ++ G  H    +E G++
Sbjct: 4207 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--------KVIAIATGSLHCVCCTEDGEV 4258

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             TW            G +  GQLG G       P +V   +  K  +V+CG  HT A
Sbjct: 4259 YTW------------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 23/267 (8%)

Query: 62  PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           P++  +     +  LA    G H L L+  G V++ G  D G+LG  +   Y  EP  I+
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDAT-YLEEPTMIA 528

Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
                   K VV I+ G  +S+ IT+DGELY WG+ + G+LG G    +  P+   V  L
Sbjct: 529 AFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 586

Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            G+     A G    Q++AVT  G+V SWG G  G+LG G          S    TP+L+
Sbjct: 587 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 637

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           ++L+ + +     G   S  + ++G+VY +G     ++      H R P L+  L   + 
Sbjct: 638 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 697

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNEN 317
            +V  G  H   LT  GE+++WGSN+ 
Sbjct: 698 VDVAVGSTHCLALTDDGEVHSWGSNDK 724



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 150/328 (45%), Gaps = 30/328 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 3003 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3061

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3062 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3120

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
              A ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3121 DNATQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3175

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3176 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3229

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3230 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3289

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAA 362
            QG   +         I  V+CG  H+ A
Sbjct: 3290 QGLEGQ--------KITRVACGSSHSVA 3309



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 167/356 (46%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G +YA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2985 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 3044

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3045 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3102

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG  ++ L          P+L+K L G +V   A G     +  
Sbjct: 3103 SGELYSWGLGEYGRLGHGDNATQL---------RPKLVKVLLGHRVIQVACGSRDAQTLA 3153

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3154 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3213

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3214 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3265

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3266 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3309



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G ++  G   +G+
Sbjct: 4051 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4110

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4111 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    IP K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4169 -GSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4225

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4226 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4278

Query: 280  RPSLISKLPYSE--EVVCGGYHT 300
            RP L++ L   +   V CG  HT
Sbjct: 4279 RPRLVAALQGKKINRVACGSAHT 4301



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3057 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3174

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 3175 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3231

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + + G+VY +GD        Q+GN    
Sbjct: 3232 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3281

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3282 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3312



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 54/329 (16%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C +     +  + C     L L+ +G VY                  +L P+ I  L
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 476

Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++ +GE++ WG    G+LG G   A  +  PT +   +G  
Sbjct: 477 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--ATYLEEPTMIAAFNG-- 532

Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            KQA       A G   S  +T  G++ +WG G  GRLGHG          S  + TP L
Sbjct: 533 -KQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGS---------SEDQTTPML 582

Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           +  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL  
Sbjct: 583 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 642

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVD 344
            +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P   + +QG        
Sbjct: 643 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQG-------- 694

Query: 345 QICTSIVLVSCGWKHTAAIS-EGKILTWG 372
                +V V+ G  H  A++ +G++ +WG
Sbjct: 695 ---KKVVDVAVGSTHCLALTDDGEVHSWG 720



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 31/288 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + +AF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 505 WGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAVITIDGELYTWGR 563

Query: 98  NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            ++G+L  G SE+    +    + GLK   V   +G   + A+T +G+++ WG    G+L
Sbjct: 564 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 623

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG + 
Sbjct: 624 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 681

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQE 274
            +           P+L+  L+G KV   A G  H   + ++G V+ +G    DK+  F  
Sbjct: 682 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN--DKLQHFDT 730

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++ ++P  +  L +   + CG          G+ + W S     +G+
Sbjct: 731 LSNKKQPKALPGLKHIVGISCG---------PGQSFAWSSCSEWSVGL 769



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2939 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2996

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GK+ + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3048

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+
Sbjct: 3049 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3108

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3109 WGLGEYGRLGHGDNATQLRPKLVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3160

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3161 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3202

Query: 423  TGAL 426
            + AL
Sbjct: 3203 SLAL 3206



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 136/340 (40%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
            G +Y WG N  GQLG G + AKV +P PT+                              
Sbjct: 3940 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3998

Query: 171  --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                                +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 3999 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4058

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 4059 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4109

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4110 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4169

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +  V CG + + A+++ G + TWG G  H     
Sbjct: 4170 SDGCKIPMK---------IDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYH----- 4215

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4216 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4248



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 38/248 (15%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P +I    G +    V   A 
Sbjct: 494 LALSSNGEVFSWGCGDGGRLGHGD---------ATYLEEPTMIAAFNGKQAGKHVVHIAC 544

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P L++ L      +V CG     T 
Sbjct: 545 GSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 604

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +T  G++++WG  + G LG G  D   +P+ V+              IV V CG + + 
Sbjct: 605 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD--------LDIVKVCCGSQFSV 656

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++ +G++ TWG G +             +LGHG D     P +++  +  K + V+ G 
Sbjct: 657 ALTKDGQVYTWGKGDNQ------------RLGHGTDEHVRFPKLLDTLQGKKVVDVAVGS 704

Query: 421 NHTGALLE 428
            H  AL +
Sbjct: 705 THCLALTD 712



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +     + +  T R ++ + G +   A          
Sbjct: 3938 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTA------- 3990

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3991 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4048

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G++
Sbjct: 4049 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD--------IAAGGAHSACITASGEL 4100

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V+  +  + + V+CG
Sbjct: 4101 FTWGKG------------RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 4139



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 27/212 (12%)

Query: 224 TSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           ++   P LI  L   K VK+AA     H   +  NG V+ +G     ++   +  +   P
Sbjct: 465 STTLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEP 524

Query: 282 SLISKL------PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           ++I+         +   + CG  ++ V+T  GELYTWG    G LG GS +   +P  V 
Sbjct: 525 TMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVT 584

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                  VD  C S      G   T A++E G++ +WG G              G+LG G
Sbjct: 585 ALKGLKVVDVACGS------GDAQTLAVTENGQVWSWGDGDY------------GKLGRG 626

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  P +V   +++  ++V CG   + AL
Sbjct: 627 GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL 658



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 4209 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4268

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K++ +++ G  H+ A
Sbjct: 4269 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4303


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 40/379 (10%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGC 91
            +R     WGN   G LGLG +E  +   P     FE  +++K++ACG  HTL +TE G 
Sbjct: 15  FRRLTMYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQ 74

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKN 150
           +YA G NDFGQLG   + G   +  +I G++  V+  ++ G  HS A+   G+LY WG +
Sbjct: 75  LYACGSNDFGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSD 131

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           S GQLGL      +   P  V+ L+ +   Q + G++  +A+T  G++ +WG+       
Sbjct: 132 SCGQLGLETDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS------- 183

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             +   +   L   +   P L+  L G+ +   A G  HS  + ++G V+ +G     ++
Sbjct: 184 -NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQL 242

Query: 271 LFQEGNHARRPSLISKLPYSE-EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVL 328
                     P+ +  +   + + + GG    V LT  G ++T G+   G LG GS    
Sbjct: 243 GINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNE 302

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHS 386
             P +V        ++ + +++  V+CG +HT  +  S+G++ ++G G            
Sbjct: 303 IVPRKV--------LELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLG------------ 342

Query: 387 SGGQLGHGNDVDYIHPTIV 405
           S GQLG  + ++   P +V
Sbjct: 343 SVGQLGTKSSINSNTPQLV 361



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 141/298 (47%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+G+LG     ++ + +     E   + ++ACG AH++ L E G +Y  G +  GQL
Sbjct: 79  GSNDFGQLGHDGCRTKLQKI--PGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQL 136

Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  + G   +P  +  L   + VQIS GY H  A+T  GELY WG N  GQLGLG    
Sbjct: 137 GLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPG 196

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V   PT V  L G+     A G   S  V+  G V  WG    G+LG   ++S+     
Sbjct: 197 NVSK-PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL----- 250

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                +P  +K +  VKVK  A G   S  +  +G V+  G     ++     ++   P 
Sbjct: 251 ----SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPR 306

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   +V CG  HT  L  S G +Y++G    G LG  S    ++P+ V GP
Sbjct: 307 KVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLVLGP 364



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 32/142 (22%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG---PFSESPVDQIC 347
           + V CG  HT  +T  G+LY  GSN+ G LG       H   R +    P  ES V    
Sbjct: 57  KSVACGNNHTLAVTEDGQLYACGSNDFGQLG-------HDGCRTKLQKIPGVESLV---- 105

Query: 348 TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTI 404
             +  V+CG  H+ A++E G++ TWG              S GQLG   D  + Y  P I
Sbjct: 106 --MTSVACGEAHSMALNEWGQLYTWG------------SDSCGQLGLETDEGIQY-KPKI 150

Query: 405 VNFGENVKALQVSCGFNHTGAL 426
           V    ++  +Q+SCG+ H  AL
Sbjct: 151 VKTLASMLLVQISCGYKHCMAL 172


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 42/364 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+   R  PV       +++ A+A G  H++ LT  G V+  G N  GQ
Sbjct: 82  WGQNMHGQLGDGTNTDRKIPVQVKDL--NNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQ 139

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       + +P++++ LK  +  I++   H+ A+  DG ++ WG+N  GQLG G    
Sbjct: 140 LGDGTTKSRN-KPVQVNNLK-NITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTD 197

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+ T+   L+ I +   A G   S+A    G + +WG    G+LG G          
Sbjct: 198 RNTPVQTR--SLNTIIS--IAGGGYHSLAQKADGTIWTWGLNQYGQLGDGT--------- 244

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+   P L+  ++   V +   G  HS  +  NG ++I+G     ++  +  ++   P 
Sbjct: 245 ITNRTIPVLVNGIK--DVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPV 302

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  GG H+ +L S G ++TWG+NENG LG G+     +P +         
Sbjct: 303 PMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQA-------- 354

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                +++  ++ G +H+ A+ S+G I  W WG +            GQLG G+  +   
Sbjct: 355 --STLSNVTAIASGEQHSIALKSDGTI--WAWGSNR----------NGQLGDGSISNRST 400

Query: 402 PTIV 405
           P +V
Sbjct: 401 PVLV 404



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+ +SR +PV  +  +  ++ A+A  G H L L   G V+  G N +GQ
Sbjct: 132 WGSNWAGQLGDGTTKSRNKPVQVNNLK--NITAIASKGLHNLALKSDGTVWTWGRNIYGQ 189

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       +  P++   L   ++ I+ G +HS A   DG ++ WG N  GQLG G    
Sbjct: 190 LGDGTTTDRN-TPVQTRSLN-TIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITN 247

Query: 163 KVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           + IP+      ++GI  K  ++   G + S+ +   G +  WG    G+LG         
Sbjct: 248 RTIPV-----LVNGI--KDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGD-------- 292

Query: 220 FLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
             RST +  TP  + +L+ +       G  HS  +  +G V+ +G+    ++   +G   
Sbjct: 293 --RSTDNRSTPVPMGDLKNIMT--IDGGGDHSLILKSDGTVWTWGNNENGQL--GDGTTM 346

Query: 279 RRPSLI--SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R + I  S L     +  G  H+  L S G ++ WGSN NG LG GSI    +P  V+
Sbjct: 347 SRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRSTPVLVK 405



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 162/358 (45%), Gaps = 46/358 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           ++  ++ G  H++ L   G V   G N  GQLG   N    + P+++  L   V  I+ G
Sbjct: 59  TILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKI-PVQVKDL-NNVTAIAGG 116

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+T DG ++ WG N  GQLG G   ++  P+  +V  L  I T  A+ G   ++A
Sbjct: 117 AWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPV--QVNNLKNI-TAIASKGLH-NLA 172

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +   G V +WG    G+LG G          +T   TP   + L  + + IA  G+ HS 
Sbjct: 173 LKSDGTVWTWGRNIYGQLGDGT---------TTDRNTPVQTRSLNTI-ISIAGGGY-HSL 221

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
               +G ++ +G     ++   +G    R  P L++ +     + CGG H+ VL + G +
Sbjct: 222 AQKADGTIWTWGLNQYGQL--GDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNGTI 279

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKI 368
           + WG N++G LG  S D   +P     P  +        +I+ +  G  H+  + S+G +
Sbjct: 280 WIWGFNQHGQLGDRSTDNRSTPV----PMGD------LKNIMTIDGGGDHSLILKSDGTV 329

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            TW            G++  GQLG G  +    P   +   NV A  ++ G  H+ AL
Sbjct: 330 WTW------------GNNENGQLGDGTTMSRATPIQASTLSNVTA--IASGEQHSIAL 373



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 28/279 (10%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
           RI      ++Q+S G  HS A+  DG +  WG+N +GQLG G    + IP+  +V+ L+ 
Sbjct: 52  RIPIFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPV--QVKDLNN 109

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
           +     A G   SVA+T  G V +WG+  +G+LG G          + S   P  +  L+
Sbjct: 110 V--TAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGT---------TKSRNKPVQVNNLK 158

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
            +   IA+ G LH+  +  +G V+ +G     ++          P     L     +  G
Sbjct: 159 NI-TAIASKG-LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGG 216

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           GYH+    + G ++TWG N+ G LG G+I     P  V G             + ++ CG
Sbjct: 217 GYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNG----------IKDVSMIRCG 266

Query: 357 WKHTAAI-SEGKILTWGWG--GSHGTFSEDGHSSGGQLG 392
             H+  + + G I  WG+   G  G  S D  S+   +G
Sbjct: 267 GDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPMG 305



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG   +G+LG  S ++R  PV     +  ++  +  GG H+L L   G V+  G N+ G
Sbjct: 281 IWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENG 338

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    +  +  P++ S L   V  I++G  HS A+  DG ++ WG N NGQLG G  +
Sbjct: 339 QLGDGTTMSRA-TPIQASTLS-NVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSIS 396

Query: 162 AKVIPIPTKVE 172
            +  P+  K++
Sbjct: 397 NRSTPVLVKIK 407


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 168/402 (41%), Gaps = 43/402 (10%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           S +    A  WG+   G+LG GS      PV  S     ++  +A G AH L +T  G +
Sbjct: 51  SAVAADTALAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTI 110

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKN 150
            A G N  GQLG          P+ + GL     V  ++ G  HS A+T  G +  WG N
Sbjct: 111 LAWGDNSSGQLG-DGTTSNRHTPVAV-GLPTGVTVTAVAAGAAHSLALTSAGTVLAWGAN 168

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           + GQLG G       P P  V    G+     A G   S+AVT  G VL+WG   SG+LG
Sbjct: 169 TIGQLGDGTTIDS--PAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLG 226

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G          +    TP ++    GV     A G LHS  +   G V  +G  +  ++
Sbjct: 227 EGT---------TIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQL 277

Query: 271 LFQEGNHARRPSLI----SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
              +G  A R + +    S       V  G   +  L+S G +  WGSN +G LG G+  
Sbjct: 278 --GDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLGDGTTA 335

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
              +P  V  P          T++  ++ G  H  A+ S G  + W            G+
Sbjct: 336 DRSTPVTVSSPAG--------TTVTAIAGGDAHGLAVTSVGAAIAW------------GN 375

Query: 386 SSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGAL 426
           +S GQLG G + D + P  V+       L  ++ G  H+ A+
Sbjct: 376 NSFGQLGDGTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAV 417



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 143/329 (43%), Gaps = 28/329 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV        ++ A+A G AH+L LT  G V A G N  GQ
Sbjct: 113 WGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWGANTIGQ 172

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    I  S  P+ ++         ++ G  HS A+T  G +  WG N++GQLG G   
Sbjct: 173 LGDGTTI-DSPAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGEGTTI 231

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V   SG+     A G   S+AVT  G VL+WG+  SG+LG G  +      
Sbjct: 232 PSRTPV--VVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTA------ 283

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
                 TP  +    G  V   AAG   S  +   G V  +G  +  ++   +G  A R 
Sbjct: 284 ---DRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQL--GDGTTADRS 338

Query: 281 -PSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  +S  P    V     G  H   +TS G    WG+N  G LG G+     +P  V  
Sbjct: 339 TPVTVSS-PAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAVSL 397

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISE 365
           P          T++  ++ G  H+ A++ 
Sbjct: 398 PVG-------TTTLTAIAAGAAHSVAVAA 419


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 125/301 (41%), Gaps = 19/301 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS  S   PV  S        A+A G  H+L LT  G + A G N FGQ
Sbjct: 111 WGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQ 170

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           LG       S  P+ +S      V  I+ G  H+  +T  G  L  WGKN+ GQLG G  
Sbjct: 171 LGDGSTTDRS-TPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGTT 229

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P+   V    G+     A G + S+ +T     L+WG    G+LG+G        
Sbjct: 230 TGRDTPV--AVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGT------- 280

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P  +    G +    AAG LHSA +   G  + +G     ++       +  
Sbjct: 281 --TTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSE 338

Query: 281 PSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           P  +S LP    +         H   +TS G    WG+N NG LG GS     +P  V  
Sbjct: 339 PVAVS-LPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAVSL 397

Query: 337 P 337
           P
Sbjct: 398 P 398



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 169/433 (39%), Gaps = 57/433 (13%)

Query: 12  YYLKQDIKLGSKLGICKRWISSTLQRRFAAL---------WGNGDYGRLGLGSLESRWRP 62
           + L   + L   +G    W     Q R AA          WG  D G+LG G++     P
Sbjct: 23  FILALAVTLAQSIGASPGWA----QHRSAATAVVSDTILAWGENDGGQLGNGTMIDSSEP 78

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GL 121
           V  S     ++ A+A G  H L LT  G V A G N  GQLG       S  P+ +S   
Sbjct: 79  VAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEGQLGNGSTTSSS-TPVAVSLPT 137

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
               V ++ G  HS A+T  G +  WG N+ GQLG G    +  P+   V   +G     
Sbjct: 138 GTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPV--AVSLPAGTTVAA 195

Query: 182 AALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A G + ++ +T  G  +L+WG    G+LG G          +T   TP  +    GV V
Sbjct: 196 IAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGT---------TTGRDTPVAVTLPPGVTV 246

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEE---VV 294
              A G  HS  +  +     +G  +      Q GN     SL+     LP   E   + 
Sbjct: 247 TSVAGGRDHSLVLTSDDTALAWGGNS----FGQLGNGTTTDSLVPIAVALPTGTEATAIA 302

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            G  H+  LTS G  + WG N  G LG GS      P  V       P D   T+I    
Sbjct: 303 AGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAV-----SLPADTRLTAIAGRD 357

Query: 355 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 413
               H   I S G  L W            G ++ G+LG G+  D   P  V+     + 
Sbjct: 358 S--DHNVTITSAGAALAW------------GANANGELGDGSTTDRSTPVAVSLPAGTRV 403

Query: 414 LQVSCGFNHTGAL 426
             ++ G + + AL
Sbjct: 404 AAIAAGDDQSMAL 416


>gi|294816123|ref|ZP_06774766.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
 gi|294328722|gb|EFG10365.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
          Length = 527

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 166/364 (45%), Gaps = 39/364 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
           WG    G+LG  ++  R+ P    A  K  ++ LA G   T      + L     V+  G
Sbjct: 155 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 214

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
            ND GQLG          P R+ GL   + Q++ G  H+ A+  +G+    ++ WG N +
Sbjct: 215 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 273

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG      K +P+P  V+ L+G  T   A G E S+A+  GG +++WG    G+LG+ 
Sbjct: 274 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 331

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
                   L ST    P  +K L    V+I AAG   S     +G +  +G+    ++  
Sbjct: 332 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 381

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  ++  P  ++ LP   +E +V GG H+  L S   +Y WGSN+ G L  G+I+    
Sbjct: 382 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 437

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHS 386
                 P +++        +  ++ G  +  A+++G     GWG    G  G+ + D H+
Sbjct: 438 ------PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHT 491

Query: 387 SGGQ 390
             GQ
Sbjct: 492 LVGQ 495



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 56/308 (18%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
           A+  D  +  WG N  GQLG      +  P P  +  L     +Q A G + +      V
Sbjct: 145 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 202

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+     V +WG    G+LG G        L + +   P  +  L G+     AAG LH+
Sbjct: 203 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 252

Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
             +  NG     V+ +GD     +  Q G+    P  +  +P        +  V  G  H
Sbjct: 253 LALRNNGDPQDGVWAWGD----NIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L  GG L  WG+N+ G LG  +I +   P  V+          + + +V ++ G   
Sbjct: 308 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVK---------NLTSPVVEIAAGCNF 358

Query: 360 T-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           + A +++G I  WG         E+GH   G+LG+G   + + P  V       A ++  
Sbjct: 359 SLARLADGTIKAWG---------ENGH---GELGNGQTANSLTPVSVTGLPPGSAERIVA 406

Query: 419 GFNHTGAL 426
           G NH+ AL
Sbjct: 407 GGNHSYAL 414


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 36/341 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H ++K ++       HTL  T  G V++ G  D
Sbjct: 438 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 496

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 497 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 556

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++ IP  T V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 557 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 612

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 613 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 662

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 663 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 722

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
            G      +D +  +I  +S G  H    TA   + +++ W
Sbjct: 723 VG------LDGV--AIQQISAGTSHSLAWTALPRDRQVVAW 755



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 46/350 (13%)

Query: 86  LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG 
Sbjct: 378 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAATFADAQTIEAGQYCTFVISSDGS 433

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
           +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SWG
Sbjct: 434 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWG 493

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y 
Sbjct: 494 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYT 544

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
           +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG L
Sbjct: 545 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 604

Query: 321 GIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
           G G  + ++ P   E +QG F    + ++C        G + + A+ S G++  WG G  
Sbjct: 605 GHGDTNRVYKPKVVEALQGMF----IRKVC-------AGSQSSLALTSTGQVYAWGCGAC 653

Query: 377 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G  S +  +             + P ++      + + +S G +H  AL
Sbjct: 654 LGCGSSEATA-------------LRPKLIEELATTRVVDISIGDSHCLAL 690



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 492 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 551

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 552 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 608

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 609 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 663

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   +V   + G  H   +  +  VY +G+ ++
Sbjct: 664 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 704



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 653

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    VV IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 654 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 713

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 714 GPITK-PKKVVGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 545 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 602

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 603 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 659

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 660 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 711

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 712 --STGPITKPKKVVGLDGVAIQQISAGTSHS 740


>gi|327315376|ref|NP_001192151.1| regulator of chromosome condensation [Ciona intestinalis]
          Length = 477

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 190/409 (46%), Gaps = 45/409 (11%)

Query: 40  AALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A   G GD G+LGLG  + SR +P + ++     +K +  GG HT+ LT+   +Y  G N
Sbjct: 89  ALTVGQGDMGQLGLGEDIMSRKKPAIVASIADEKVKKVVAGGMHTVCLTDQHKIYTFGCN 148

Query: 99  DFGQLG-ISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWG--KNSNG 153
           D   LG  + +     EP  I G   ++ VV IS G  H+ A+T  G++++WG  ++  G
Sbjct: 149 DEFALGRDTADDDSEYEPKLIVGPLTERRVVHISAGDSHTCALTDGGKVFVWGSFRDGRG 208

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-G 212
            +GL K+  +V   PT++  ++       + G +  V VT  GKV + G    G++G  G
Sbjct: 209 VIGLIKE-EEVCKCPTQLTSINETVVDVDS-GNDHLVMVTMSGKVFTMGCPDQGQIGRIG 266

Query: 213 QESSILGFLRSTSEY-TPRLI--KELEGVKVKIAAAGFLHSA---CIDENGRVYIFGDRA 266
           +  +  G  R T+ Y TP  I  +++ G K  +    F  S     +   G VY FG   
Sbjct: 267 RYFTDRGRKRKTANYITPAKIHLRKVRGSKKPVIVKVFCGSYTTWVLSSEGHVYGFGLNN 326

Query: 267 VDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++ F +G +   P  +  L     +++  G +HT VL   G +YT G  + G LG GS
Sbjct: 327 YKQLGFPDGENRYIPEYVETLSDIGCKQIAGGQHHTLVLDHKGSVYTIGRGDYGRLGHGS 386

Query: 325 IDVLHSPERVQGPFSESPVDQIC--TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
            DV+ + E          ++ +C  TSI   SC     A   +GK   WG G        
Sbjct: 387 -DVIEASE-------PKKINSLCDITSITATSC--VSFAVDKDGKAYGWGLG-------- 428

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVK---ALQVSCGFNHTGALLE 428
               +  QL  G++ D   P  +  G+N++    LQV+ G  HT  L +
Sbjct: 429 ----TNLQLTTGDEEDEWEPVELT-GKNLEKRSVLQVASGGQHTVILAQ 472


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 182/419 (43%), Gaps = 62/419 (14%)

Query: 37  RRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R  A L WG+G+ G+LG+G  + + R     A + +++ A+  G  ++L + + G ++  
Sbjct: 6   RPVAVLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTW 65

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  G LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ
Sbjct: 66  GWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQ 125

Query: 155 LGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G        G +A  + IPIP +  C   +  +Q A G   SV +T  G V +WG    
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTWG---- 179

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
                  +    G +++ S  TP  ++ LE  +V + A G  H+  +  +  ++ +G+  
Sbjct: 180 -------QPWPPGDIKNIS--TPVRVQGLE--QVSMIAVGAFHNLALSVDRILWAWGNNE 228

Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G 
Sbjct: 229 YGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGD 288

Query: 325 IDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 382
               H  P +VQ    E         IV VSCG  H+  + S+G+I ++G  G H     
Sbjct: 289 DKSSHMVPLQVQLLAGE--------DIVQVSCGGTHSVVLTSDGRIFSYG-RGDH----- 334

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENV-----------KALQVSCGFNHTGALLEYV 430
                 G+LG G  V   HP  V                 +A  V+CG  HT A++ + 
Sbjct: 335 ------GRLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTLAIVTWT 387


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3937 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3994

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3995 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4052

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4053 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4107

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4108 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4162 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4221

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4222 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4261

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4262 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4295



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2939 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2998

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2999 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3057

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3058 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3109 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3168

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3169 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3213

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3214 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3252



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2977 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3036

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3037 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3094

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3095 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3145

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3146 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3205

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3206 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3257

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3258 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3301



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 482 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 540

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 541 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 598

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 599 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 649

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 650 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 709

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 710 SWGSNDQ 716



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3049 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3109 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3166

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3167 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3223

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3224 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3272

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3273 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3304



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2995 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3055 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3113

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3114 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3167

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3168 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3222

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3223 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3282

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3283 GLEGQ--------KITRVACGSSHSVA 3301



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 468

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +++I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 524

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 525 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 572

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 632

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 633 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 691

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 692 -------VAAGSTHCLALTEDSEVHSWG 712



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 497 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 555

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 556 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 614

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 615 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 672

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 673 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2931 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2988

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3040

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3041 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3100

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3101 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3152

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3153 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3194

Query: 423  TGAL 426
            + AL
Sbjct: 3195 SLAL 3198



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3932 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3990

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3991 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4050

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4051 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4101

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4102 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4162 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4207

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4208 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4240



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 553 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 612

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 613 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 671

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 672 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 61/330 (18%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
           P++  GL    V QI+        ++ +G +Y    NS+    QL  G  +  +I I   
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKI--- 476

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                      A       +A+   G+V SWG G  GRLGHG    +           P+
Sbjct: 477 ----------AAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPK 517

Query: 231 LIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           +I    G +    V   A G  +SA I   G +Y +G     ++          P L++ 
Sbjct: 518 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 577

Query: 287 LPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFS 339
           L   +  +V CG     T  +T  G++++WG  + G LG G  D   +P   E++Q    
Sbjct: 578 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD--- 634

Query: 340 ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +V V CG + + A++ +G++ +WG G +             +LGHG +  
Sbjct: 635 --------LDVVKVRCGSQFSIALTKDGQVYSWGKGDNQ------------RLGHGTEEH 674

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +P ++   +  K + V+ G  H  AL E
Sbjct: 675 VRYPKLLEGLQGKKVIDVAAGSTHCLALTE 704



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 607 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 666

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 667 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 718



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3930 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3980

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3981 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4040

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4041 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4092

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4093 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4131


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 141/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  IS L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+     S +    P      D+I   
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN----KSNQSYPAPVVVEK-DRI--- 310

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 311 IEIAACHLAHTSAAKTQGGHVYMWG 335



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A ++ G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  ++  + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTD 274



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 47/298 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVNTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           +Y WG N NG LG+GS     +P R+      S +  I   +  V+CG+ HT  ++ EG+
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRI------SALQGI--RVQRVACGYAHTLVLTDEGQ 277

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           +  WG             +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 278 VYAWG------------ANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSA 323



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   SA +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 54/375 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CG  H + +T+ G  ++ G    G+LG       S  P  I   K   V+ I+ G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS-HPKLIKNFKGMNVELIACG 368

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC--LSGIFTKQAALGFEQS 189
            +HS A+T  G+LY WG  +     LG ++     IP KV C  + G+     + G   +
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKV-CGLMEGLRVSHVSCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG  S  +         TPR ++   G+K    A G  H
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCI---------TPREVETFNGLKTLKVACGVWH 478

Query: 250 SACIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--E 292
           +A + E             +G ++ +GD   DK     G++  R  P  I+ L      E
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDG--DKGKLGHGDNKPRLAPQCITALVDKSFSE 536

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           V C    T  LT+ G +YT GSN  G LG    + + SP  V+    +S V++I      
Sbjct: 537 VACSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGM-SPICVEDYLVDSTVEEI------ 589

Query: 353 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            SCG  H A + S  ++ TWG G              GQLGHG+  +   PT+V+   + 
Sbjct: 590 -SCGSHHVAVLTSRTEVYTWGKG------------ENGQLGHGDCENKCTPTLVDILRDK 636

Query: 412 KALQVSCGFNHTGAL 426
           +  ++ CG N + A+
Sbjct: 637 QVKRIVCGSNFSAAI 651



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 134/311 (43%), Gaps = 31/311 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+      P +   F+  +++ +ACG  H+  +T +G +Y    G    
Sbjct: 332 WGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG      + + P ++ GL +   V  +S G  H++ IT  G L+ +G  + G LG G
Sbjct: 392 GLLGHRSEASHWI-PKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
            ++  + P   +VE  +G+ T + A G   + AV                G + +WG G 
Sbjct: 451 DRSGCITP--REVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGD 508

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGHG     L          P+ I  L        A  +  +  +   GRVY  G  
Sbjct: 509 KGKLGHGDNKPRLA---------PQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSN 559

Query: 266 AVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++     N      +   L  S  EE+ CG +H  VLTS  E+YTWG  ENG LG G
Sbjct: 560 VYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHG 619

Query: 324 SIDVLHSPERV 334
             +   +P  V
Sbjct: 620 DCENKCTPTLV 630



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 121/279 (43%), Gaps = 50/279 (17%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E    +  +  + G   ++ VT  G+  SWG    GRLGHG E+ +          
Sbjct: 299 PKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV---------S 349

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNH---ARRP 281
            P+LIK  +G+ V++ A G  HS  +  +G +Y +GD A    L     E +H    +  
Sbjct: 350 HPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVC 409

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            L+  L  S  V CG +HT ++TS G L+T+G    G LG G      +P  V+  F+  
Sbjct: 410 GLMEGLRVSH-VSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVET-FNG- 466

Query: 342 PVDQICTSIVLVSCGWKHTAAISE--------------GKILTWGWGGSHGTFSEDGHSS 387
                    + V+CG  HTAA+ E              G + TWG G             
Sbjct: 467 ------LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDK----------- 509

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LGHG++   + P  +    +    +V+C +  T AL
Sbjct: 510 -GKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 75/152 (49%), Gaps = 6/152 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD G+LG G  + R  P   +A    S   +AC  A T+ LT TG VY  G N +GQ
Sbjct: 504 WGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQ 563

Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    +   + P+ +    +   V +IS G HH + +T   E+Y WGK  NGQLG G  
Sbjct: 564 LGCP--LANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDC 621

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             K    PT V+ L     K+   G   S A+
Sbjct: 622 ENKC--TPTLVDILRDKQVKRIVCGSNFSAAI 651



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 24/208 (11%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V+  + G  H+  + + G  + +G+ A  ++          P LI   
Sbjct: 298 TPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNF 357

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPV 343
                E + CG YH+C +TS G+LYTWG  +  +G LG  S      P++V G      V
Sbjct: 358 KGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRV 417

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                    VSCG  HTA I S G++ T+G     GTF        G LGHG+    I P
Sbjct: 418 SH-------VSCGPWHTALITSAGRLFTFG----DGTF--------GALGHGDRSGCITP 458

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V     +K L+V+CG  HT A++E +
Sbjct: 459 REVETFNGLKTLKVACGVWHTAAVVELM 486


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4245 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4284

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4285 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 148/328 (45%), Gaps = 30/328 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H   LT  G V++ G  D
Sbjct: 3018 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G
Sbjct: 3077 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3136 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3190

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3191 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3304

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAA 362
            QG   +         I  V+CG  H+ A
Sbjct: 3305 QGLEGQ--------KITRVACGSSHSVA 3324



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 134/304 (44%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4185 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4230

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4003

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4004 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4115

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4116 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4154


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 62  GCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLG-NG 120

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              +   P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 121 TTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-- 178

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGS---------SG 229

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           +  TP  I  L+G++V+  A G+ H+  + ++G+VY +G  +  ++    GN + +    
Sbjct: 230 NHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQL--GTGNKSNQSYPT 287

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 288 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 321



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 148/330 (44%), Gaps = 40/330 (12%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L++T    ++  G N  G LG+ + I  ++E
Sbjct: 16  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGD-IQSTIE 74

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G      +P      
Sbjct: 75  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTN 134

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 135 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGS---------TANQPIPRRV 184

Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-- 288
              L+   V   A G + S  + ++G VY++G     ++ L   GNH+  P  I+ L   
Sbjct: 185 TGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHST-PCRIAALQGI 243

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----D 344
             + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D
Sbjct: 244 RVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKD 294

Query: 345 QICTSIVLVSCGWKHTAAISE--GKILTWG 372
           +I   I + +C   HT+A     G +  WG
Sbjct: 295 RI---IEIAACHSTHTSAAKTQGGHVYMWG 321



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 33/242 (13%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
           +T   ++   G    G LG       LG ++ST E  PR +  L G K+   + G   H 
Sbjct: 47  MTVNDEIFVLGTNCCGCLG-------LGDIQSTIE--PRRLDSLSGKKIACLSYGSGPHI 97

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
                 G V+ +G  A +++     NH   P  IS    ++   EV CG YH+ VLTS G
Sbjct: 98  VLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 157

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-G 366
           E++ WG N +G +G GS      P RV G      V       V ++CG   + A+ + G
Sbjct: 158 EVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVV-------VNIACGQMCSMAVVDSG 210

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           ++  WG+ G+            GQLG G+  ++  P  +   + ++  +V+CG+ HT  L
Sbjct: 211 EVYVWGYNGN------------GQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVL 258

Query: 427 LE 428
            +
Sbjct: 259 TD 260



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  +   P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 214 VWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYG 273

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 274 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 326

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T + C   +F
Sbjct: 327 --SVILPHLTHLSCTDDVF 343


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4245 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4284

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4285 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +++I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4185 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4230

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 61/330 (18%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
           P++  GL    V QI+        ++ +G +Y    NS+    QL  G  +  +I I   
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKI--- 499

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                      A       +A+   G+V SWG G  GRLGHG    +           P+
Sbjct: 500 ----------AAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPK 540

Query: 231 LIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           +I    G +    V   A G  +SA I   G +Y +G     ++          P L++ 
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 600

Query: 287 LPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFS 339
           L   +  +V CG     T  +T  G++++WG  + G LG G  D   +P   E++Q    
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD--- 657

Query: 340 ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +V V CG + + A++ +G++ +WG G +             +LGHG +  
Sbjct: 658 --------LDVVKVRCGSQFSIALTKDGQVYSWGKGDNQ------------RLGHGTEEH 697

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +P ++   +  K + V+ G  H  AL E
Sbjct: 698 VRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4003

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4004 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4115

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4116 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4154


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3963 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4020

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4021 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4078

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4079 HGNRSP--CDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4133

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4134 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4247

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4248 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4287

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4288 GDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLA 4321



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3232 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGK--------KIVHVAVGALHCLAVTDAGQVY 3283

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 43/314 (13%)

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            VVQ++ G     A+TV+G++Y  G+ +NG+LGLG  +  V PIP +V  LS    K+ A+
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PIPRQVTALSSYVVKKVAV 3056

Query: 185  --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
              G   + A+T  GKV SWG G  G+LGH        F R   +  PRLI+ L+  +++ 
Sbjct: 3057 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 3107

Query: 243  AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
             A G  HSA +  +G +Y +G     ++   +     +P ++  L      +V CG    
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSC 355
             T  LT  G +++WG  + G LG G  +  + P   ER+ G             +  + C
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG-----------QGVCQIEC 3216

Query: 356  GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            G + + A+++ G + TWG G               +LGHG+DV    P +V      K +
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIV 3264

Query: 415  QVSCGFNHTGALLE 428
             V+ G  H  A+ +
Sbjct: 3265 HVAVGALHCLAVTD 3278



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + +P+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3309 GLEGQ--------KITRVACGSSHSVA 3327



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAVP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3958 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4016

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4017 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4076

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G+++   AAG  HSAC+   G +Y +G     
Sbjct: 4077 LGHGNRSPC---------DRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYG 4127

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4128 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4188 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4233

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4234 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4266



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 117/273 (42%), Gaps = 43/273 (15%)

Query: 165  IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            I +P+  E LS +   Q A G +   AVT  GKV + G   +GRLG G  S  +   R  
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQV 3043

Query: 225  SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
            +  +  ++K     KV + + G  H+  +  +G+V+ +G+    K+      +  +P LI
Sbjct: 3044 TALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3097

Query: 285  SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
              L      ++ CG  H+  LTS GELYTWG  E G LG G       P+ V+       
Sbjct: 3098 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-- 3155

Query: 343  VDQICTSIVLVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                   ++ V+CG +     A   EG + +WG     G F        G+LG G     
Sbjct: 3156 ------RVIQVACGSRDAQTLALTDEGLVFSWG----DGDF--------GKLGRGGSEG- 3196

Query: 400  IHPTIVNFGENVKAL------QVSCGFNHTGAL 426
                  N  +N++ L      Q+ CG   + AL
Sbjct: 3197 -----CNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3956 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4006

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4007 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4066

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4067 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVD--------VAAGGAHSACVTAAGDL 4118

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4119 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4157



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 147/311 (47%), Gaps = 35/311 (11%)

Query: 123  KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            ++VV +S G++H +A+T +G +Y WG+N +G+LG G K+      P +V        K+ 
Sbjct: 875  RQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEV 934

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
              G E ++A T  G V  WG G  G+LG G           T  + P  IK L  + V  
Sbjct: 935  VCGGEHTLARTESGSVYGWGNGRIGQLGLGDR---------TLHWLPVPIKTLRKMHVTQ 985

Query: 243  AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGY 298
             AAG+ H+  + ++G V +FG   V ++    G   R+    P+ +  +P   +  CG  
Sbjct: 986  LAAGYAHTIVVLKSGEVMVFGGGEVGQL----GTGMRKDLLVPTKLQAMPSIVQAACGYC 1041

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESPVDQICTSIVLVS 354
            HT +LT  GE+YT GS  +G L  G  D L     +P+ V+G   +         I  ++
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQL--GHADNLQNDRLAPKMVEGLNGK--------RIRFIA 1091

Query: 355  CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            CG  HT AI++   + + WGG  GT   D   +  Q      +  + P+IV      +  
Sbjct: 1092 CGSFHTIAITDLDNV-YTWGGVQGT---DSDGAMRQERKAAILKRVTPSIVKGLMGKRIS 1147

Query: 415  QVSCGFNHTGA 425
             VSCG  H+ A
Sbjct: 1148 LVSCGHAHSVA 1158



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 24/285 (8%)

Query: 43   WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WG    G LG G      +  P     F+   +K + CGG HTL  TE+G VY  G    
Sbjct: 899  WGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRI 958

Query: 101  GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG+ +   + L P+ I  L+K  V Q++ GY H+  +   GE+ ++G    GQLG G 
Sbjct: 959  GQLGLGDRTLHWL-PVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGM 1017

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +  K + +PTK++ +  I   QAA G+  +  +T  G+V + G+  SG+LGH        
Sbjct: 1018 R--KDLLVPTKLQAMPSIV--QAACGYCHTALLTEAGEVYTCGSAMSGQLGHADN----- 1068

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGN 276
                     P++++ L G +++  A G  H+  I +   VY +G       D  + QE  
Sbjct: 1069 --LQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERK 1126

Query: 277  HA--RR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
             A  +R  PS++  L       V CG  H+   T  GE+Y W S 
Sbjct: 1127 AAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSST 1171



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 137/303 (45%), Gaps = 29/303 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WGNG  G+LGLG     W PV      K  +  LA G AHT+ + ++G V   G  + GQ
Sbjct: 953  WGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQ 1012

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P ++  +   +VQ + GY H++ +T  GE+Y  G   +GQLG      
Sbjct: 1013 LGTGMRKDL-LVPTKLQAMPS-IVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQ 1070

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW----GAGGSGRLGHGQESSIL 218
                 P  VE L+G   +  A G   ++A+T    V +W    G    G +   ++++IL
Sbjct: 1071 NDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAIL 1130

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-AVDKMLFQEGN- 276
                     TP ++K L G ++ + + G  HS     +G VY++    ++   L   G+ 
Sbjct: 1131 ------KRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSG 1184

Query: 277  ------HARRPSLISKLP-----YSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
                      P L+S +P      S+ VV     G   T V+T  G LY+WGS   G LG
Sbjct: 1185 LSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLG 1244

Query: 322  IGS 324
            +G 
Sbjct: 1245 LGD 1247



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 145/328 (44%), Gaps = 61/328 (18%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVV-QISTGYH 133
            ++CG  H   LTE G VY  G N  G+LG  +  G   L P ++   K + V ++  G  
Sbjct: 880  VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGE 939

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H+ A T  G +Y WG    GQLGLG +    +P+P K   L  +   Q A G+  ++ V 
Sbjct: 940  HTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKT--LRKMHVTQLAAGYAHTIVVL 997

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G+V+ +G G  G+LG G    +L  + +  +  P +++         AA G+ H+A +
Sbjct: 998  KSGEVMVFGGGEVGQLGTGMRKDLL--VPTKLQAMPSIVQ---------AACGYCHTALL 1046

Query: 254  DENGRVYIFG---------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
             E G VY  G               DR   KM+  EG + +R   I+         CG +
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMV--EGLNGKRIRFIA---------CGSF 1095

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV------- 351
            HT  +T    +YTWG    G  G  S   +    +       + + ++  SIV       
Sbjct: 1096 HTIAITDLDNVYTWG----GVQGTDSDGAMRQERKA------AILKRVTPSIVKGLMGKR 1145

Query: 352  --LVSCGWKHTAAIS-EGKILTWGWGGS 376
              LVSCG  H+ A + +G++  W   GS
Sbjct: 1146 ISLVSCGHAHSVATTMDGEVYVWSSTGS 1173



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 33/198 (16%)

Query: 239  KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL------ISKLPYSEE 292
            +V   + G+ H A + ENG VY +G     ++    G+ +  P L        K    +E
Sbjct: 876  QVVNVSCGWNHCAALTENGHVYTWGRNGSGEL--GHGDKSGVPQLHPKQVIFFKSKCVKE 933

Query: 293  VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI-CTSIV 351
            VVCGG HT   T  G +Y WG+   G LG+G    LH        +   P+  +    + 
Sbjct: 934  VVCGGEHTLARTESGSVYGWGNGRIGQLGLGD-RTLH--------WLPVPIKTLRKMHVT 984

Query: 352  LVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
             ++ G+ HT   +  G+++ +G G              GQLG G   D + PT +    +
Sbjct: 985  QLAAGYAHTIVVLKSGEVMVFGGG------------EVGQLGTGMRKDLLVPTKLQAMPS 1032

Query: 411  VKALQVSCGFNHTGALLE 428
            +  +Q +CG+ HT  L E
Sbjct: 1033 I--VQAACGYCHTALLTE 1048


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +     +V CG YHT   + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 34/307 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG +H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGAEH 247

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           TA ++ +GK+ T+G          D  S  GQLG+    +   P +V   + + + QV C
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLVEIIDGLVS-QVDC 294

Query: 419 GFNHTGA 425
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP++ +  L  ++V  S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + +    V CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVEIIDGLVSQ---VDCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G E +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  ++    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG + ++  +P+++      + ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKI------TTLNGI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 180/405 (44%), Gaps = 44/405 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E +    V  A E  +++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DETGRPVRRDIVIPKR--CAPQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT+ GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 389
           P++V     E         I+ VSCG  H+ A++ +G+I ++G  G HG        + G
Sbjct: 293 PQKVNLLAGE--------DIIQVSCGGTHSVALTRDGRIFSFG-RGDHGRLGYGRKVTTG 343

Query: 390 Q-LGHGNDVDYIHPTIVNFGENVK----ALQVSCGFNHTGALLEY 429
           Q L    D+  +     +  E       A  V+CG  HT A++E+
Sbjct: 344 QPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEW 388



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 110/282 (39%), Gaps = 78/282 (27%)

Query: 198 VLSWGAGGSGRLGHGQES-----------------SILGFLRST---------------- 224
           V++WG+G  G+LG G +                  S++G  R++                
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 225 -----------SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
                      +E TP L+K L  VK+  AA G  H   +D+ GR Y +G         +
Sbjct: 67  RGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
               + G   RR  +I K    +    +V  GG H+ VLT  G ++TWG         G 
Sbjct: 127 PSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQ----PWPPGD 182

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
           I  +  P RVQG            ++ L++ G  H  A+ E   L W W          G
Sbjct: 183 IKQISIPVRVQG----------LENVRLIAVGAFHNLALKEDGTL-WAW----------G 221

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           ++  GQLG G+      P  V   +++  + ++ G  H+ AL
Sbjct: 222 NNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTAL 263


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 132/279 (47%), Gaps = 24/279 (8%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR-ISGLKKEVVQI 128
           +  L A+ C       L++TG V+            S +  ++   L  +SG+   V Q+
Sbjct: 79  EERLAAVGCTDDGVTLLSDTGVVFCVD---------SPHPPFTPRSLEALSGIT--VTQV 127

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  H+  ++ DG++Y WG+NS GQLGLGK+    I  P  V  LS +   Q + G + 
Sbjct: 128 ACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDH 187

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S A++  G V  WG    G+LG G          +T   TP L+  L   K   AA G  
Sbjct: 188 SFALSVSGSVFGWGRNDCGQLGLGD---------TTDRETPTLVHYLNMKKTVFAACGKD 238

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG 306
           H+A +  +G V+ FG     ++      +A  P L+++L      ++ CG YHT VLT  
Sbjct: 239 HTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDH 298

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
            ++Y++G NE+G LG         P  VQ P  E P+ Q
Sbjct: 299 MKVYSFGCNEHGQLGPREETHPCVPLPVQLP-REGPIIQ 336



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 18/208 (8%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E LSGI   Q A G + +V ++  G+V +WG    G+LG G+E         +S  
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGC-------SSIS 165

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +P+ ++ L  + V   +AG  HS  +  +G V+ +G     ++   +      P+L+  L
Sbjct: 166 SPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYL 225

Query: 288 PYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              + V   CG  HT VLT  G ++T+GS   G LG  S      P  V   +       
Sbjct: 226 NMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWG------ 279

Query: 346 ICTSIVLVSCGWKHTAAISEG-KILTWG 372
               +  ++CG  HT  +++  K+ ++G
Sbjct: 280 --AKVTKIACGRYHTLVLTDHMKVYSFG 305



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 23/138 (16%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGPFSESPVDQICTS 349
           +V CG  HT VL+  G++YTWG N  G LG+G      + SP+ V+   S  PV      
Sbjct: 126 QVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRS-LSSMPV------ 178

Query: 350 IVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
            V VS G  H+ A+S  G +  W            G +  GQLG G+  D   PT+V++ 
Sbjct: 179 -VQVSAGGDHSFALSVSGSVFGW------------GRNDCGQLGLGDTTDRETPTLVHYL 225

Query: 409 ENVKALQVSCGFNHTGAL 426
              K +  +CG +HT  L
Sbjct: 226 NMKKTVFAACGKDHTAVL 243



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 27/210 (12%)

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG-NHARRPSLI 284
           +TPR ++ L G+ V   A G  H+  + ++G+VY +G  +  ++ L +EG +    P  +
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170

Query: 285 ---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              S +P  + V  GG H+  L+  G ++ WG N+ G LG+G      +P  V       
Sbjct: 171 RSLSSMPVVQ-VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHY----- 224

Query: 342 PVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                    V  +CG  HTA ++ +G + T+G           GH   GQLGH +  + +
Sbjct: 225 ---LNMKKTVFAACGKDHTAVLTMDGTVFTFG----------SGHY--GQLGHNSFRNAL 269

Query: 401 HPTIVNFGENVKALQVSCGFNHTGALLEYV 430
            P +V      K  +++CG  HT  L +++
Sbjct: 270 CPRLVAELWGAKVTKIACGRYHTLVLTDHM 299



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LGLG    R  P +            ACG  HT  LT  G V+  G   +GQ
Sbjct: 200 WGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQ 259

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  ++ L   +V +I+ G +H+  +T   ++Y +G N +GQLG  ++ 
Sbjct: 260 LG-HNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318

Query: 162 AKVIPIPTKV 171
              +P+P ++
Sbjct: 319 HPCVPLPVQL 328



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 4/175 (2%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG    G+LGLG     S   P    +     +  ++ GG H+  L+ +G V+  G ND 
Sbjct: 146 WGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDC 205

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG+ +        L      K+ V  + G  H++ +T+DG ++ +G    GQLG    
Sbjct: 206 GQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLG--HN 263

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           + +    P  V  L G    + A G   ++ +T   KV S+G    G+LG  +E+
Sbjct: 264 SFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTS-GGELYTWG 313
           P ++ K    E   C   HT    S GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDR 309

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 310 I---IEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 4/162 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   + ++ACG   ++ + +TG VY  G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 236 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           + +  P P  VE    I    A      S A + GG V  WG
Sbjct: 295 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 109/241 (45%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G GS      P RV G      V       + ++CG   + A+ + G+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV-------MSIACGQMCSMAVVDTGE 225

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 226 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273

Query: 428 E 428
           +
Sbjct: 274 D 274



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  S  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMS--IACGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 274

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG+I  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 275 EGQIYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 322

Query: 425 A 425
           A
Sbjct: 323 A 323



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A +  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFCCTDDVF 357


>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Strongylocentrotus purpuratus]
          Length = 536

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P  +        +  +ACG  H+L LT+ G V+A G N+ G
Sbjct: 103 WGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCG 162

Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G   + NI    + + + G K+ VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 163 QVGSGATANISTPRKVVSVLGGKR-VVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGN 221

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +  P P KV  L+G+   QAA G+  S+A++  G + +WGA   G+LG G ++++ G
Sbjct: 222 NVNQ--PSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCG 279

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
             +         I E  G  + IAA  + H SA + + G+VY++G
Sbjct: 280 AAK---------IGESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
           +GN     LGLG + S   P       K  + ALA G G H +  TE G +Y+ G N + 
Sbjct: 50  FGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYC 109

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG +      L P RI+G     ++ QI+ G HHS  +T  GE++ WG N+ GQ+G G 
Sbjct: 110 QLG-NGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGA 168

Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A   I  P K V  L G      A G   S+AV   G+V  WG  G+G+LG G      
Sbjct: 169 TAN--ISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGN----- 221

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               + ++ +P  +  L G+ +  AA G+ HS  + + G +Y +G
Sbjct: 222 ----NVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWG 262



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 26/306 (8%)

Query: 76  LAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
           LAC     G   +++T+   V+A G N    LG+ + +  SL P +I GL KK +  ++ 
Sbjct: 27  LACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGD-VMSSLTPRKIEGLCKKGMFALAF 85

Query: 131 GY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           G   H  A T +GE+Y WG N   QLG G     ++P       L      Q A G   S
Sbjct: 86  GSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGN-LGSCKISQIACGSHHS 144

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR-LIKELEGVKVKIAAAGFL 248
           + +T  G+V +WG    G++G G  ++I          TPR ++  L G +V   A G  
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANI---------STPRKVVSVLGGKRVVSIACGQT 195

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG 306
            S  + ++G VY +G     ++      +   P  +S L      +  CG  H+  L+  
Sbjct: 196 SSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDE 255

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G +YTWG+N  G LG G+   L    ++ G      +D   T    +S     T     G
Sbjct: 256 GNIYTWGANSYGQLGTGNKANLCGAAKI-GESIGRFIDIAATHYAHISAAMTQT-----G 309

Query: 367 KILTWG 372
           K+  WG
Sbjct: 310 KVYMWG 315



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 37/247 (14%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
            +++ VT   +V ++G   +  LG G   S L         TPR I+ L   K  + A  
Sbjct: 36  NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSL---------TPRKIEGL--CKKGMFALA 84

Query: 247 F---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHT 300
           F    H     ENG +Y +G     ++     N    P  I+    S    ++ CG +H+
Sbjct: 85  FGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHS 144

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
            VLT  GE++ WG N  G +G G+   + +P +V        V       V ++CG   +
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRV-------VSIACGQTSS 197

Query: 361 -AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A +  G++  WG+ G+            GQLG GN+V+   P  V+    +   Q +CG
Sbjct: 198 LAVVDSGEVYGWGYNGN------------GQLGLGNNVNQPSPCKVSSLNGLIISQAACG 245

Query: 420 FNHTGAL 426
           + H+ AL
Sbjct: 246 YAHSMAL 252



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  P   S+     +   ACG AH++ L++ G +Y  G N +GQ
Sbjct: 209 WGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQ 268

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG                + + +   +T Y H S+A+T  G++YMWG+   GQ       
Sbjct: 269 LGTGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWGQ-CRGQ------- 320

Query: 162 AKVIPIPTKVECLSGIF 178
           +   P+ T+  CL  +F
Sbjct: 321 SITSPMETRFTCLDDVF 337


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 158/341 (46%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      RP +      +++  +ACG  HT  ++ +G ++    G ++ 
Sbjct: 288 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 347

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R+SG  +  +V+ ++ G  HS+  T +G+L+ +G  + G LG G
Sbjct: 348 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 406

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
            + +  +P P +V+ LSG+ T + A G   + A+              K+ +WG G   R
Sbjct: 407 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 464

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG + + L          P  +  L        A G   +  +  +G V+  G  A  
Sbjct: 465 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 515

Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN     R P L+  KL   + EE+ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 516 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 571

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G  +   SP      F E+  D+   SI   SCG   TA+I
Sbjct: 572 GDTEDRRSPT-----FVEALKDRNVKSI---SCGSNFTASI 604



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 160/371 (43%), Gaps = 55/371 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +ACG  H   +T  G V+  G    G+LG   +  +S   L        V  ++ G +H+
Sbjct: 269 IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHT 328

Query: 136 SAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
            A++  G+L+ WG  ++  G LG G + +  IP   +V   L G+     A G   S   
Sbjct: 329 CAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIP--KRVSGPLEGLQVLSVACGTWHSALA 386

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  GK+ ++G G  G LGHG   S+           PR ++ L G+K    A G  H+A 
Sbjct: 387 TSNGKLFTFGDGTFGVLGHGDRESVP---------YPREVQILSGLKTIKVACGVWHTAA 437

Query: 253 IDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHT 300
           I E          + +++ +GD    ++          P+ +S L  Y+  ++ CG   T
Sbjct: 438 IIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMT 497

Query: 301 CVLTSGGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             LT+ G ++T G    G LG     G +  L   +++ G F E            +SCG
Sbjct: 498 VALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQ-DKLVGEFVEE-----------ISCG 545

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   PT V   ++     
Sbjct: 546 AYHVAVLTSRSEVFTWGRGAN------------GRLGHGDTEDRRSPTFVEALKDRNVKS 593

Query: 416 VSCGFNHTGAL 426
           +SCG N T ++
Sbjct: 594 ISCGSNFTASI 604



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 26/193 (13%)

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
           A G  H A +   G V+ +G+ +  ++     N   RP L+  L  +  + V CG YHTC
Sbjct: 270 ACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTC 329

Query: 302 VLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLVSCGWK 358
            +++ G+L+TWG  ++  G LG G+ +V H  P+RV GP            ++ V+CG  
Sbjct: 330 AVSTSGDLFTWGDGTHNAGLLGHGT-EVSHWIPKRVSGPLE-------GLQVLSVACGTW 381

Query: 359 HTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
           H+A A S GK+ T+G     GTF        G LGHG+     +P  V     +K ++V+
Sbjct: 382 HSALATSNGKLFTFG----DGTF--------GVLGHGDRESVPYPREVQILSGLKTIKVA 429

Query: 418 CGFNHTGALLEYV 430
           CG  HT A++E +
Sbjct: 430 CGVWHTAAIIEVM 442



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG GS E+   P   SA   ++   LACG   T+ LT +G V+  G   +GQ
Sbjct: 457 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 516

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   + G  L  L    L  E V +IS G +H + +T   E++ WG+ +NG+LG G   
Sbjct: 517 LGNPLSDG-RLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 575

Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
            +    PT VE L     K  + G  F  S+ +
Sbjct: 576 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 606


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3988 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4045

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4046 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4103

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4104 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4158

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4159 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4272

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4273 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4312

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4313 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4346



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3983 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4041

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4042 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4101

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4102 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4152

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4153 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4213 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4258

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4259 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4291



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3981 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4031

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4032 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4091

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4092 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4143

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4144 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4182


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 162/363 (44%), Gaps = 38/363 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R             +K +A GG+H L +     ++A G N  GQ
Sbjct: 61  WGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHALAVLSDKTLWAWGRNGDGQ 120

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+      S  P+++ G    EVV ++    +S+A+  DG++  WG N+ GQLG G   
Sbjct: 121 LGVGSTT-SSFSPVKVPGRTGVEVVAMAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTT 179

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+  +V  LS I  K  ++G    +A+  GG V +WG        +G     LG  
Sbjct: 180 DQSSPV--EVSALSDI--KGVSVGKYHMLALRSGGTVWAWGF-------NGSGQLGLGSG 228

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T   TP+    L+GV     +AG  HS  +  +G V+ +G     ++          P
Sbjct: 229 SNTQYNTPQQAAVLKGVAS--VSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSFTDRPSP 286

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             + +L    EV  G +H   L   G ++ WG N +G LG G+     SP +V G     
Sbjct: 287 VQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPVQVPG----- 341

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                 T +V V+ G  H+ A+ S+G++ TWG             +S GQLG G+     
Sbjct: 342 -----LTGVVSVAAGDGHSVAVLSDGRVYTWG------------RNSAGQLGDGSQDALP 384

Query: 401 HPT 403
           HPT
Sbjct: 385 HPT 387



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 157/363 (43%), Gaps = 32/363 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG  S  +R  PV  S      +K +A GG H+L L   G +++ G N   Q
Sbjct: 484 WGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQ 543

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+S +   S     +      VV ++ G  HS  +  +G++  WG N  GQ+G G    
Sbjct: 544 LGVSRDTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPV 603

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                 +  E  +       A G   S+A+   G V +WG   SG+LG G   S++   R
Sbjct: 604 PTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDG---SLVDRTR 660

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L   +V    AG  HS  +  +G V+ +GD    ++          P 
Sbjct: 661 ------PVQVARLN--RVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPV 712

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSES 341
            +  L     V  GG H+  L + G ++ WG N NG +G GS   +++ P  V+  FS  
Sbjct: 713 QVPGLSGVVAVAAGGRHSLALRADGTVWAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQ 772

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDY 399
            V      ++ V+ G  H+ A+ S G++ TW            G +  GQLG+  N+ D 
Sbjct: 773 DV------VMGVAAGDTHSVAVLSGGRVRTW------------GQNDSGQLGYATNNTDR 814

Query: 400 IHP 402
             P
Sbjct: 815 STP 817



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 163/369 (44%), Gaps = 37/369 (10%)

Query: 65  CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-K 123
           CS   +     L  G   TLF    G ++A G N  GQLG    +   L P+ +S     
Sbjct: 454 CSFVCRLETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNR-LTPVSVSTASLT 512

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +V  ++ G  HS A+  DG+L+ WG NS  QLG+ +        P  V  +SG+    A 
Sbjct: 513 DVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAG 572

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
                S+ V   GKV +WG  G G++G G       +  S +E  P  +  + GV     
Sbjct: 573 --ETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTE--PTNLFSILGV----- 623

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG  HS  +  +G V+ +G     ++         RP  +++L     VV G YH+  L
Sbjct: 624 AAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVSVVAGLYHSLAL 683

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            S G ++ WG N +G LG G+      P +V G           + +V V+ G +H+ A+
Sbjct: 684 RSDGTVWAWGDNGSGQLGDGTYFGQMLPVQVPG----------LSGVVAVAAGGRHSLAL 733

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH---PTIVNFGENVKALQVSCG 419
            ++G +  W            G++S GQ+G G+D   I+   P  V F      + V+ G
Sbjct: 734 RADGTVWAW------------GYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAG 781

Query: 420 FNHTGALLE 428
             H+ A+L 
Sbjct: 782 DTHSVAVLS 790



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 129/298 (43%), Gaps = 17/298 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG+GS  S + PV         + A+A    ++  +   G V   G N +GQ
Sbjct: 113 WGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNSAAVLSDGKVLTWGYNAYGQ 172

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +S L  ++  +S G +H  A+   G ++ WG N +GQLGLG  + 
Sbjct: 173 LGNGSTTDQS-SPVEVSALS-DIKGVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSN 230

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +   L G+ +  A  G   S+A+   G V +WG    G+LG G  +      R
Sbjct: 231 TQYNTPQQAAVLKGVASVSA--GDSHSLALRWDGTVWAWGQNNQGQLGIGSFTD-----R 283

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +    PRL   +E       AAG  H+  +  +G V+ +G     ++          P 
Sbjct: 284 PSPVQVPRLTGVVE------VAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPV 337

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--PF 338
            +  L     V  G  H+  + S G +YTWG N  G LG GS D L  P   Q   PF
Sbjct: 338 QVPGLTGVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHPTPGQALLPF 395



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 38/308 (12%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           + E  + + G  ++     DG ++ WG NS GQLG G  A ++   P  V+  +G+  K+
Sbjct: 36  RLETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAP--VDFSNGMVVKR 93

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A G   ++AV     + +WG  G G+LG G          +TS ++P  +    GV+V 
Sbjct: 94  VAAGGSHALAVLSDKTLWAWGRNGDGQLGVGS---------TTSSFSPVKVPGRTGVEVV 144

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
             AA   +SA +  +G+V  +G  A  ++          P  +S L   + V  G YH  
Sbjct: 145 AMAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYHML 204

Query: 302 VLTSGGELYTWGSNENGCLGIGSI--DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
            L SGG ++ WG N +G LG+GS      ++P++            +   +  VS G  H
Sbjct: 205 ALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQA----------AVLKGVASVSAGDSH 254

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           + A+  +G +  W            G ++ GQLG G+  D   P+ V        ++V+ 
Sbjct: 255 SLALRWDGTVWAW------------GQNNQGQLGIGSFTD--RPSPVQVPRLTGVVEVAA 300

Query: 419 GFNHTGAL 426
           G  H  AL
Sbjct: 301 GQFHALAL 308


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             + ++ P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4244 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4283

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4284 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCG--GYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 29/294 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           +WGSN+  C    ++ V   PE    P  +S        IV ++CG   + A S
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS------KHIVGIACGPAQSFAWS 778



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG+G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGTRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLG G E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4184 SDGSKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4229

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4230 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LGLG 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+   E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGLGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 34/188 (18%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
               G+H   L + GE+Y+WG  + G LG G    L  P +V   FS     Q    +V 
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP-KVISAFSGK---QAGKHVVH 556

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           ++CG  ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGL 604

Query: 412 KALQVSCG 419
           K + V+CG
Sbjct: 605 KVIDVACG 612



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4002

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4003 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4114

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4115 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 86/238 (36%), Gaps = 74/238 (31%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G+V SWG G  GRLGHG    +           P++I    G            
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGK----------- 548

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                                  Q G H               + CG  ++  +T+ GEL
Sbjct: 549 -----------------------QAGKHVVH------------IACGSTYSAAITAEGEL 573

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
           YTWG    G LG GS +    P  V G      +D  C S      G   T A++E G++
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS------GDAQTLAVTENGQV 627

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             W WG        DG    G+LG G       P ++   +++  ++V CG   + AL
Sbjct: 628 --WSWG--------DGDY--GKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 93  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 151

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 152 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 209

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G            
Sbjct: 210 PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 260

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 318

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 319 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 352



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 144/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 47  KWPIFSLCSEEELQLVRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 105

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 165

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 166 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 215

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++    G +   P  I+ L    
Sbjct: 216 TGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR 275

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 276 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------TPVIVEKDR 326

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 327 I---IEIAACHSAHTSAAKTQGGHVYMWG 352



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 50/309 (16%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS----GIFT----------KQAAL--- 184
           G + M  K+  G+  + K    V   P+ ++ L      IF+          +QA +   
Sbjct: 11  GRVKMPEKDGGGEADMSKAVKPVRATPSSLKMLDVGKWPIFSLCSEEELQLVRQACVFGS 70

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
              + +  T   ++   G    G LG       LG ++ST E  PR +  L G K+   +
Sbjct: 71  AGNEVLYTTVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLS 121

Query: 245 AGF-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHT 300
            G   H       G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+
Sbjct: 122 YGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 181

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
            VLTS GE++ WG N +G +G GS      P RV G            ++V ++CG   +
Sbjct: 182 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-------TVVNIACGQMCS 234

Query: 361 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A+ + G++  WG+ G+            GQLG G+  +   P  +   + ++  +V+CG
Sbjct: 235 MAVVDTGEVYVWGYNGN------------GQLGLGSGGNQPTPCRIAALQGIRVQRVACG 282

Query: 420 FNHTGALLE 428
           + HT  L +
Sbjct: 283 YAHTLVLTD 291



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 245 VWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 304

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 305 QLGTGNKSNQSY-PTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 353


>gi|254390852|ref|ZP_05006063.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|197704550|gb|EDY50362.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 564

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 168/364 (46%), Gaps = 39/364 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
           WG    G+LG  ++  R+ P    A  K  ++ LA G   T      + L     V+  G
Sbjct: 192 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 251

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
            ND GQLG          P R+ GL   + Q++ G  H+ A+  +G+    ++ WG N +
Sbjct: 252 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 310

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG      K +P+P  V+ L+G  T   A G E S+A+  GG +++WG    G+LG+ 
Sbjct: 311 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGN- 367

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
            ++ +L  +       P  +K L    V+I AAG   S     +G +  +G+    ++  
Sbjct: 368 -DTILLSTI-------PVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 418

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  ++  P  ++ LP   +E +V GG H+  L S   +Y WGSN+ G L  G+I+    
Sbjct: 419 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 474

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHS 386
                 P +++        +  ++ G  +  A+++G     GWG    G  G+ + D H+
Sbjct: 475 ------PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHT 528

Query: 387 SGGQ 390
             GQ
Sbjct: 529 LVGQ 532



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 56/308 (18%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
           A+  D  +  WG N  GQLG      +  P P  +  L     +Q A G + +      V
Sbjct: 182 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 239

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+     V +WG    G+LG G        L + +   P  +  L G+     AAG LH+
Sbjct: 240 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 289

Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
             +  NG     V+ +GD     +  Q G+    P  +  +P        +  V  G  H
Sbjct: 290 LALRNNGDPQDGVWAWGD----NIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 344

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L  GG L  WG+N+ G LG  +I +   P  V+          + + +V ++ G   
Sbjct: 345 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVK---------NLTSPVVEIAAGCNF 395

Query: 360 T-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           + A +++G I  WG         E+GH   G+LG+G   + + P  V       A ++  
Sbjct: 396 SLARLADGTIKAWG---------ENGH---GELGNGQTANSLTPVSVTGLPPGSAERIVA 443

Query: 419 GFNHTGAL 426
           G NH+ AL
Sbjct: 444 GGNHSYAL 451


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4247 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4286

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4287 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4320



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2966 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3025

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3026 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3084

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3085 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3136 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3195

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3196 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3240

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3241 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3279



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3004 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3063

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3064 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3121

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3122 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3172

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3173 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3232

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3233 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3284

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3285 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3076 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3136 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3193

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3194 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3250

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3251 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3299

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3300 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3331



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 617

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 678 SWGSNDQ 684



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3022 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3082 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3140

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3141 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3194

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3195 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3249

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3250 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3309

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3310 GLEGQ--------KITRVACGSSHSVA 3328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 436

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 492

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 601 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 659

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 660 -------VAAGSTHCLALTEDSEVHSWG 680



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2958 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3015

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3067

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3068 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3127

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3128 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3179

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3180 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3221

Query: 423  TGAL 426
            + AL
Sbjct: 3222 SLAL 3225



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4187 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4232

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4233 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 454 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 504

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 565 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 613

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 614 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 661

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 662 AGSTHCLALTE 672



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 634

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4005

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4006 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4117

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4118 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4156


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +     +V CG YHT   + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 34/307 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG +H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGAEH 247

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           TA ++ +GK+ T+G          D  S  GQLG+    +   P +V   + + + QV C
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLVEIIDGLVS-QVDC 294

Query: 419 GFNHTGA 425
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 29/309 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP++ +  L  ++V  S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI--SEGK 367
           +T+G N +G LG        +PE+ +GP     +D + +    V CG  HT A   + G+
Sbjct: 258 FTFGDNRSGQLGYSP-----TPEK-RGPQLVEIIDGLVSQ---VDCGSYHTLAYVHTTGQ 308

Query: 368 ILTWGWGGS 376
           ++++G G S
Sbjct: 309 VVSFGHGPS 317



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G E +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  ++    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIVLV 353
           CG  H+  +   G ++ WG+   G LGIG + ++  +P+++      + ++ I   I+ V
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKI------TTLNGI--KIIQV 133

Query: 354 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENV 411
           SCG  H+ A+S + ++ +W            G +S GQLG G +      P  V   E +
Sbjct: 134 SCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGI 181

Query: 412 KALQVSCGFNHTGAL 426
              QV+ G  H+ AL
Sbjct: 182 PLAQVAAGGAHSFAL 196


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 178/386 (46%), Gaps = 47/386 (12%)

Query: 48  YGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           +G  GLG     +R  P V     +   K        +L + +TG V+      FG+   
Sbjct: 7   WGPRGLGQYLRPNRVAPAVFPKQVQIPFKVFGMAEPESL-VPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP+         +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPK-------DNIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T  GELYT+G  ENG LG+ +  +++  SP+RV G       
Sbjct: 226 VGKPISWISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG------- 278

Query: 344 DQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP 402
             I   ++ V+CG  HT  +++  +  +G G              GQLG G  + +   P
Sbjct: 279 --IPEKVIQVACGGGHTVVLTDKVVYAFGLG------------QFGQLGLGTFLFETSEP 324

Query: 403 TIVNFGENVKALQVSCGFNHTGALLE 428
            ++   ++ K   +SCG NHT  + +
Sbjct: 325 KVIERIKDQKISYISCGENHTALMTD 350



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+ G VYA G N+ GQLG+ +     +   +     K  + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    +++A  G  
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPEKVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  +  +  VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVL-TDKVVYAFGLGQFGQLGLGTFLFE----TSEPKVIERIKDQKISYISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G +YT+G   +G LG+G
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLG 368



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 144/314 (45%), Gaps = 39/314 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N+ GQLGLG    +            G FT     KQ + G   S
Sbjct: 137 TLVSTDKGSVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPKDNIKQLSAGANTS 190

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G++G   +S++      T            G  +   + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-----------GKPISWISCGYYH 239

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPEKVIQVACGGGHTVVLTD 298

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
              +Y +G  + G LG+G+     S  +V     E   DQ    I  +SCG  HTA +++
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKV----IERIKDQ---KISYISCGENHTALMTD 350

Query: 366 -GKILTWGWGGSHG 378
            G + T+G  G HG
Sbjct: 351 IGLMYTFG-DGRHG 363



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 52/259 (20%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G    + ++       +++ 
Sbjct: 132 CGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNI-------KQLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V           +   I  +S
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT----------VGKPISWIS 234

Query: 355 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENV 411
           CG+ H+A ++ +G++ T+G                G+LG  N   +++  P  V  G   
Sbjct: 235 CGYYHSAFVTVDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPE 281

Query: 412 KALQVSCGFNHTGALLEYV 430
           K +QV+CG  HT  L + V
Sbjct: 282 KVIQVACGGGHTVVLTDKV 300



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCHMLVF 402


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 160/341 (46%), Gaps = 24/341 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+    +L  GS E   +P +  AF   + + +  G   T  +   G V A G   +G
Sbjct: 381 VWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQTIEAGQYCTFVVYSDGTVRACGKGSYG 438

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
           +LG+ + N   +L+ L     +  + +IS+      H+ A+T DGE++ WG    G+LG 
Sbjct: 439 RLGLGDSNNQTTLKKLNFDH-RYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGKLGH 497

Query: 158 GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           G  + +    P +++  L G   K  + G+  S AVT  G++ +WG G  GRLGHG  + 
Sbjct: 498 GNSSTQ--KYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNR 555

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            LG   +   Y P++I+ L G+ ++    G   S  +   G+++ +G  A       E  
Sbjct: 556 KLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGCGACLGCGSPEST 615

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            A RP L+ +L  +   +V CG  H   LT   E+Y WG+N  G  G G     HS   +
Sbjct: 616 -ALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQG-----HSQSPI 669

Query: 335 QGPFSESPVDQICTSIVLVSCGWKH----TAAISEGKILTW 371
             P     +D +  ++  +S G  H    TA  ++ +++ W
Sbjct: 670 TKPKKVVGLDGV--TVHQISAGTSHSLAWTALPTDRQVVAW 708



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 146/362 (40%), Gaps = 96/362 (26%)

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----------IPTKVECLSGI 177
           STG  + + +T + E+Y+WG NS+ QL  G +   + P           I     C   +
Sbjct: 365 STG-ENGNMVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFANAQTIEAGQYCTFVV 423

Query: 178 F------------------------TKQAALGFEQSVAV----------------TGGGK 197
           +                        T    L F+    +                T  G+
Sbjct: 424 YSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADGE 483

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LGHG          ST +Y  ++   L+G  VK  +AG+ HSA + E+G
Sbjct: 484 VFSWGDGDYGKLGHGNS--------STQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDG 535

Query: 258 RVYIFGD---------RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG 306
            ++ +G+          +  K+   + N   +P +I  L   Y  +V CG   +  LTS 
Sbjct: 536 ELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTST 595

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAIS- 364
           G+L+ WG     CLG G      SPE          V+++  T IV V+CG  H  A++ 
Sbjct: 596 GQLFAWGC--GACLGCG------SPESTA--LRPKLVEELANTRIVDVACGDSHCLALTH 645

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHT 423
           + ++  W            G+++ GQ G G+    I  P  V   + V   Q+S G +H+
Sbjct: 646 DNEVYAW------------GNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHS 693

Query: 424 GA 425
            A
Sbjct: 694 LA 695



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 21/179 (11%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + EN  VY++G  +  ++         +P L      ++ +  G Y T V+ S G +   
Sbjct: 373 VTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFANAQTIEAGQYCTFVVYSDGTVRAC 432

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK-HTAAIS-EGKILT 370
           G    G LG+G  +   + +++   F    V +  +S    S G   HT A++ +G++ +
Sbjct: 433 GKGSYGRLGLGDSNNQTTLKKLN--FDHRYVIRKISS----SKGSDGHTLALTADGEVFS 486

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 428
           WG G              G+LGHGN     +P  +      K ++ +S G+ H+ A+ E
Sbjct: 487 WGDGDY------------GKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE 533


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 133/273 (48%), Gaps = 21/273 (7%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 5   GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 63

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A ++I
Sbjct: 64  TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLI 123

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P      CL        A G   S+AV   G+V  WG  G+G+LG G          S +
Sbjct: 124 PRRV-TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SGN 173

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
           + TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    P
Sbjct: 174 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPAP 231

Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            ++ K    E   C   HT    T GG +Y WG
Sbjct: 232 VVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 264



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQL 155
           N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+  QL
Sbjct: 2   NCCGCLGLGD-VQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G G  +
Sbjct: 61  GNGTTNHGLVPCHISTN-LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           + L   R T     +++  +        A G + S  +   G VY++G     ++     
Sbjct: 120 NQLIPRRVTGCLQNKVVVNI--------ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 171

Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +   P  I+ L     + V CG  HT VLT  G++Y WG+N  G LG G+      P  
Sbjct: 172 GNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAP 231

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
           V         D+I   I + +C   HT+A     G +  WG
Sbjct: 232 V-----VVEKDRI---IEIAACHSAHTSAAKTQGGHVYMWG 264



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR ++ L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 9   LGDVQSTIE--PRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 66

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 67  HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRR 126

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG   + A ++ G++  WG+ G+            GQLG
Sbjct: 127 VTGCLQNKVV-------VNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLG 167

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  +   + ++  +V+CG+ HT  L +
Sbjct: 168 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD 203



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 157 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 216

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 217 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 269

Query: 160 KAAKVIPIPTKVECLSGIF 178
             +  +P  T   C   +F
Sbjct: 270 --SVTLPHLTHFSCTDDVF 286


>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
          Length = 1386

 Score =  114 bits (284), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 121/466 (25%), Positives = 189/466 (40%), Gaps = 101/466 (21%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            +WG+G  GR G G   S   P    A   H+   L+CG  H+  +T  G + + G   FG
Sbjct: 939  VWGSGKDGRCGNGKESSEKLP--NQANTSHNFTQLSCGYHHSAAVTSDGMILSWGRGIFG 996

Query: 102  QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            QLG  +   YSL P  I  L K +++Q+S G+ HS A++  G ++ WG   +GQLG G  
Sbjct: 997  QLGHGDTENYSL-PTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDT 1055

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG--GKVLSWGAGGSGRLG-HGQESSI 217
               ++P        + I     A G   S  +T G   ++  WG     RL     E+ +
Sbjct: 1056 NDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQLYLWGCNPDCRLMIEENENQL 1115

Query: 218  LGFLRSTSEYTPRLIK-----ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-- 270
            L  L    +   +  +     +LEG++    + G  H+A +  +G +Y  G     ++  
Sbjct: 1116 LPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTAIVTRSGELYTGGSMLDGQLGV 1175

Query: 271  --------------------LFQEGNHA------------------RRPSLISKLPYSEE 292
                                L  E N +                   R    S    + +
Sbjct: 1176 NYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKELKSQSLPIYRVDFFSAQNKATQ 1235

Query: 293  VVCGGYHTCVLTSGGELYTWGSNENGCLGI---------------------------GSI 325
            V CG   T VL    E+Y +G   +G LG+                           GS 
Sbjct: 1236 VSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLNQQKTNQLKQSIQNQTYQSTEGSN 1295

Query: 326  DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
            D +  P+ +Q   S+S        +V +S G +H A +++ GK+  WG+      F E  
Sbjct: 1296 DCIAEPQLLQS-LSQS------EKVVQISAGCRHAACVTDSGKLYAWGF-----NFYE-- 1341

Query: 385  HSSGGQLGHGN-DVDYIHPTIVNFG-ENVKALQVSCGFNHTGALLE 428
                 QLG G+ + D+  PT V+ G ++ K   VSCG+ HTGAL++
Sbjct: 1342 -----QLGLGDSEKDFDVPTKVSKGLQSSKVKFVSCGYFHTGALVQ 1382



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 31/187 (16%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +G+ G GK++++ +P        S  FT Q + G+  S AVT  G +LSWG
Sbjct: 936  KVFVWGSGKDGRCGNGKESSEKLPNQANT---SHNFT-QLSCGYHHSAAVTSDGMILSWG 991

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
             G  G+LGHG           T  Y+ P  I+ L  +++   + G+ HS  +   GR++ 
Sbjct: 992  RGIFGQLGHG----------DTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFS 1041

Query: 262  FG---------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG--GELY 310
            +G             D +L +E +  R+ S+   +     + CG  H+  +T G   +LY
Sbjct: 1042 WGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGM-----IACGHSHSGCITDGQSSQLY 1096

Query: 311  TWGSNEN 317
             WG N +
Sbjct: 1097 LWGCNPD 1103



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 24/182 (13%)

Query: 197  KVLSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            KV  WG+G  GR G+G+ESS  L    +TS    +L            + G+ HSA +  
Sbjct: 936  KVFVWGSGKDGRCGNGKESSEKLPNQANTSHNFTQL------------SCGYHHSAAVTS 983

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G +  +G     ++   +  +   P+ I  L   +  +V CG  H+  L+S G +++WG
Sbjct: 984  DGMILSWGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWG 1043

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG---KILT 370
              E+G LG G  +    P+ +   F ++ ++     + +++CG  H+  I++G   ++  
Sbjct: 1044 YGEDGQLGHGDTNDYLLPKEIDF-FRKNSIN-----VGMIACGHSHSGCITDGQSSQLYL 1097

Query: 371  WG 372
            WG
Sbjct: 1098 WG 1099



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 23/120 (19%)

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEG 366
            +++ WGS ++G  G G      S E++    + S       +   +SCG+ H+AA+ S+G
Sbjct: 936  KVFVWGSGKDGRCGNGK----ESSEKLPNQANTS------HNFTQLSCGYHHSAAVTSDG 985

Query: 367  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             IL+WG     G F        GQLGHG+  +Y  PT +     ++ +QVSCG+ H+ AL
Sbjct: 986  MILSWG----RGIF--------GQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMAL 1033


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3704 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3761

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3762 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3819

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3820 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3874

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3875 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3929 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3988

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 3989 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4028

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4029 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4062



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 29/273 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S      P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2824 WGEGDDGKLGHFSR----MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2879

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++  G     ++G G 
Sbjct: 2880 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGP 2938

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +  K   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2939 E-VKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2995

Query: 220  FLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P++++ L G K V  + +G LH   + ++G+VY +GD        Q+GN  
Sbjct: 2996 -------RKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHG----QQGNGT 3044

Query: 279  ----RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
                R+P+L+  L   +   V CG  H+   T+
Sbjct: 3045 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3077



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 130/294 (44%), Gaps = 29/294 (9%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  G + T F    G V++ G  D G+LG      +S  P  I  LK K +  I+ G  
Sbjct: 2804 AVHSGTSQTGFXPVDGKVFSWGEGDDGKLG-----HFSRMPRLIEALKTKRIRDIACGSS 2858

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVA 191
            HS+A+T  GELY WG    G+LG G    ++ P   KV  L G    Q A G    Q++A
Sbjct: 2859 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLA 2916

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T  G V S G G   ++G G E              P+ I+ L G  V     G   S 
Sbjct: 2917 LTDEGLVFSLGDGDLWKIGPGPEVKGCNI--------PQNIERLNGQGVCQIECGAQFSL 2968

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGE 308
             + ++G V+ +G     ++      H R+P ++  L   + V C   G  H   +T  G+
Sbjct: 2969 ALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
            +Y WG N++G  G G+  V   P  VQG   +         I  V+CG  H+ A
Sbjct: 3029 VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ--------KITRVACGSSHSVA 3074



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 163/360 (45%), Gaps = 48/360 (13%)

Query: 79   GGAHTLF-LTETGCVYATG-LNDFGQLGISENIGYSLEPL-RISGLKKEVVQ---ISTGY 132
            GG+ +LF +T  G VYA G    +   G+  + G    P   I+ L   VV+   + +G 
Sbjct: 2750 GGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGT 2809

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
              +    VDG+++ WG+  +G+LG   +      +P  +E L     +  A G   S A+
Sbjct: 2810 SQTGFXPVDGKVFSWGEGDDGKLGHFSR------MPRLIEALKTKRIRDIACGSSHSAAL 2863

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
            T  G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +
Sbjct: 2864 TSSGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2914

Query: 251  ACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
              + + G V+  GD  + K+    E      P  I +L      ++ CG   +  LT  G
Sbjct: 2915 LALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2974

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC-GWKHTAAISE- 365
             ++TWG  +   LG GS   +  P+ V+G   +         IV  SC G  H  A+++ 
Sbjct: 2975 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK--------KIVACSCSGALHCLAVTDS 3026

Query: 366  GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G++  WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3027 GQVYAWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3074



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3699 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3757

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3758 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3817

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3818 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3868

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3869 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 3929 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 3974

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3975 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4007



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 107/250 (42%), Gaps = 35/250 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  +++ WG N   QLG  K   K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2704 SAATIRTKVFSWGLNDKDQLGGLKN--KKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2761

Query: 196  GKVLS------WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            GKV +      W A G G +  G      G + + S Y          VK     +G   
Sbjct: 2762 GKVYACGEATKWPAWGLG-ISSGTVPIPHGXITALSSYV---------VKKVAVHSGTSQ 2811

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
            +     +G+V+ +G+    K+    G+ +R P LI  L      ++ CG  H+  LTS G
Sbjct: 2812 TGFXPVDGKVFSWGEGDDGKL----GHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSG 2867

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAIS 364
            ELYTWG  E G LG G       P+ V+              ++ V+CG +     A   
Sbjct: 2868 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTD 2919

Query: 365  EGKILTWGWG 374
            EG + + G G
Sbjct: 2920 EGLVFSLGDG 2929



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3697 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3747

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3748 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3807

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3808 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 3859

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 3860 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 3898


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG GS     RP V  +     +  +A GGAH+  +T  G +Y  G   +G+
Sbjct: 4003 WGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4062

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG S++    L+P  +  L+   VV I+  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4063 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4120

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4121 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4177

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4178 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4230

Query: 280  RPSLISKL--PYSEEVVCGGYHT 300
            RP L++ L       V CG  HT
Sbjct: 4231 RPRLVAALQGKKVNRVACGSAHT 4253



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3897 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3954

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3955 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4012

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G+     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4013 HGSRSP--CDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4067

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4068 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4181

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4182 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4221

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4222 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4255



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2901 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2960

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2961 NGRLGLGISSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3019

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3020 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG-- 323
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3071 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3130

Query: 324  -SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
               +V  + ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3131 EGCNVPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3175

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3176 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3214



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   +V+   + +G  H
Sbjct: 2939 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRH 2998

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2999 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3056

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3057 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3107

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3108 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3167

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3168 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3219

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3220 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3263



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3011 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3071 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3128

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3129 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3185

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3186 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3234

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3235 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3266



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2957 GEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3017 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3075

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3076 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3129

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3130 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3184

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3185 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3244

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3245 GLEGQ--------KITRVACGSSHSVA 3263



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 115/245 (46%), Gaps = 17/245 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 435 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 493

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S+AIT +GELY WG+ +  +L  G+ A   I I            K   + F Q++A   
Sbjct: 494 SAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYE 553

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  + 
Sbjct: 554 NGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 604

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
           ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E+++W
Sbjct: 605 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664

Query: 313 GSNEN 317
           GSN+ 
Sbjct: 665 GSNDQ 669



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 143/328 (43%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  GCVY    N             +L P  + GL
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN-----------SDTLAPQLVQGL 421

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 477

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G   RL HG         RS      
Sbjct: 478 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG---------RSAMNEIL 525

Query: 230 RLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            +I  L+  K    + G  F  +    ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 526 IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 585

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 586 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 644

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 645 -------VAAGSTHCLALTEDSEVHSWG 665



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2893 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2950

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVK-----KVAVHSGG-RHATALTV 3004

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 3005 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3064

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILT 370
              E G LG G       P+ V+              ++ V+CG +     A   EG + +
Sbjct: 3065 LGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLVFS 3116

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTG 424
            WG     G F        G+LG G           N  +N++ L      Q+ CG   + 
Sbjct: 3117 WG----DGDF--------GKLGRGGSEG------CNVPQNIERLNGQGVCQIECGAQFSL 3158

Query: 425  AL 426
            AL
Sbjct: 3159 AL 3160



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 135/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
            G +Y WG N  GQLG G + AKV +P                                  
Sbjct: 3892 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3950

Query: 168  -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                             PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3951 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4010

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSAC+   G +Y +G     
Sbjct: 4011 LGHGSRSPC---------DRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4061

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4062 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4122 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4167

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4168 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4200



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 450 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 508

Query: 98  NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG--YHHSSAITVDGELYMWGKNSNGQ 154
            ++ +L    +    +  + ISGL +++ +  S G  +  + A   +G+++ WG    G+
Sbjct: 509 GNYXRLDHGRSAMNEIL-IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGK 567

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 568 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 625

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 626 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 560 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 619

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 620 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3890 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3940

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3941 TADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4000

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG GS      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4001 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVD--------VAAGGAHSACVTAAGDL 4052

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4053 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4091


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 158/334 (47%), Gaps = 41/334 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
           G G YGRLG G+  S   P++   F     K L   G+  H++ + + G ++  G  D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYG 244

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG  ++       L  +   + +V    G+ HS+A+   G LYMWG+   G+LGLG   
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304

Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
            + +P+  P   E        Q   GF  +V ++  G+ V S+GA  +G+LGHG      
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI------FGDRAVDKMLF 272
               +  ++ P++I  L+G+ +   AAG   SA +   G +Y+       G+ + D+   
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLH 329
                   P ++  L      ++  G  H   LT  G ++TWG+N+NG  G GS +    
Sbjct: 410 -------LPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYT 462

Query: 330 SPERVQGPFSESPVDQIC--TSIVLVSCGWKHTA 361
           SP+ VQG    + + Q+   T+   V C W++T+
Sbjct: 463 SPQMVQG-LHGAGIQQVTAGTTHTFV-CFWRNTS 494



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 44/344 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  G N   QL  +      L P  +S   K V+ ++ G + + A+  +G +   GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSMTAGQYCTFAVLSNGTVMANGKGS 189

Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            G+LG G  A+   PI  +    +  I T + + G   S+A+   G++ +WG G  G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSIAIGKNGQIWTWGDGDYGKLG 247

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG          ST++ +P+LI+ L    +  A  G  HSA + + G +Y++G+    ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLH 329
              +      P  +  +  + +VVCG  HT VL T G  ++++G+ ENG LG G  +   
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQF 358

Query: 330 SP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 385
            P   + +QG            +I  ++ G + +AA++ EG +  WG+G           
Sbjct: 359 RPKIIDALQG-----------LTITQIAAGTQISAAVTREGALYVWGFGPC--------- 398

Query: 386 SSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                LG+G +D  ++ P +V        + ++ G NH  AL +
Sbjct: 399 -----LGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTK 437



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 15/223 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G   ++  P +  A     +    CG  H+  + + G +Y  G  D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
           LG+ + +  S+ P+++  + +E  Q+  G++H+  ++ DG  ++ +G   NG+LG G   
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  ++ L G+   Q A G + S AVT  G +  WG G     G   E+ +L   
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
                  P++++ L G  V   A G  H   + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGN 446



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
           +WG GDYGRLGLG    R  PV      + S   + CG  HT+ L+  G  V++ G  + 
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG  +       P  I  L+   + QI+ G   S+A+T +G LY+WG      LG G 
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + +   +P  V  LSG      A+G    VA+T  G V +WG   +G+ G G      G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
               TS   P++++ L G  ++   AG  H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 122/288 (42%), Gaps = 37/288 (12%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           E++ WG NS+ QL       K++  P  +     + +  A  G   + AV   G V++ G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLL-YPRNLSVYGKVMSMTA--GQYCTFAVLSNGTVMANG 186

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL-HSACIDENGRVYI 261
            G  GRLG+G          S S  +P LI+    V+  + + G   HS  I +NG+++ 
Sbjct: 187 KGSYGRLGNGA---------SASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWT 237

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
           +GD    K+   +    + P LI  L  S  +V   CG  H+  +   G LY WG  + G
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALA-SRVIVDADCGHRHSAAVCDAGHLYMWGEGDYG 296

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
            LG+G  D L     VQ P               V CG+ HT  +S      W +G +  
Sbjct: 297 RLGLG--DALQRSVPVQVPDIREASQ--------VVCGFNHTVVLSTDGRTVWSFGAAE- 345

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     G+LGHG+      P I++  + +   Q++ G   + A+
Sbjct: 346 ---------NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAV 384


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 164/338 (48%), Gaps = 37/338 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA+G N+ G
Sbjct: 68  MFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEG 127

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ + +   S   +     ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL  K
Sbjct: 128 QLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL--K 185

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +P +V    G      + G+  S  VT  G++ ++G   SG+LG  ++  +   
Sbjct: 186 NITNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLV--- 240

Query: 221 LRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
                    R+ + + G+  K+   A G  H+  + E   VY      FG   +   LF+
Sbjct: 241 -------NHRMPQSVPGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE 292

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                  P +I  +   +   + CG  HT ++T  G +YT+G   +G LG+G        
Sbjct: 293 ----TPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGL------- 341

Query: 332 ERVQGPFSESPVDQICTSIV-LVSCGWKHTAAISEGKI 368
           E     F+ +        IV LV+CG  HT   +  ++
Sbjct: 342 ENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFATPRL 379



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 158/333 (47%), Gaps = 41/333 (12%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           FG+   +ENI            K ++   +S G  H++ +T + +LYM+G N+ GQLGLG
Sbjct: 27  FGKTKFAENIPSKF------WFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG 80

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K+   +  PT V+ L     K AA G   ++  T GGKV + G    G+LG G      
Sbjct: 81  SKS--TVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERN 138

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
            F   +   + R IK+L        +AG   SA + E+G ++++GD +  ++  +   + 
Sbjct: 139 SFHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNV 190

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHS-PERVQG 336
             P  ++       + CG YH+  +T+ GELYT+G  E+G LG+   + V H  P+ V G
Sbjct: 191 CVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG 250

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                    I   +V V+CG  HT  ++E  + T+G G              GQLG G  
Sbjct: 251 ---------IPEKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTF 289

Query: 397 V-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           + +   P ++   +++K   + CG NHT  + +
Sbjct: 290 LFETPVPKVIEHIKDLKISSIFCGENHTALITD 322



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 162/365 (44%), Gaps = 60/365 (16%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      + +P  +  LK E V+ +  G +H
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVN-KPTCVKALKPEKVKFAACGRNH 108

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G++Y  G N+ GQLGLG    +          L   FT     KQ + G   S
Sbjct: 109 TLVSTEGGKVYASGGNNEGQLGLGDTDER------NSFHLISFFTSQRKIKQLSAGSNTS 162

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G    +++           P+ +    G  +   + G+ H
Sbjct: 163 AALTEDGELFMWGDNSEGQIGLKNITNVC---------VPQQV--TVGKPISWISCGYYH 211

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
           SA +   G +Y FG+    K+   +    NH R P  +  +P    +V CGG HT VLT 
Sbjct: 212 SAFVTTEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACGGGHTVVLTE 270

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT-----SIVLVSCGWKHT 360
              +YT+G  + G LG+G+               E+PV ++        I  + CG  HT
Sbjct: 271 KA-VYTFGLGQFGQLGLGTF------------LFETPVPKVIEHIKDLKISSIFCGENHT 317

Query: 361 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSC 418
           A I++ G + T+G  G HG            LG  N  +   PT+  NF   +  L V+C
Sbjct: 318 ALITDLGLMYTFG-DGRHGKLG---------LGLENFTNQFTPTLCSNFLRFIVQL-VAC 366

Query: 419 GFNHT 423
           G  HT
Sbjct: 367 GGCHT 371


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        + G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   + G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDR 309

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 310 I---IEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G GS      P RV G      V  I       SCG   + A+ + G+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI-------SCGQMCSMAVVDTGE 225

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 226 VYVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273

Query: 428 E 428
           +
Sbjct: 274 D 274



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--ISCGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
           +Y WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ 
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTD 274

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           EG+I  WG             +S GQLG GN  +  +PT V   ++      +C   HT 
Sbjct: 275 EGQIYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS 322

Query: 425 A 425
           A
Sbjct: 323 A 323



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4019 GRLGIGGTESVSTPTLLESVQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  VE L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4077 HGNRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4132 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4186 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4246 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4285

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4286 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2963 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3022

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3023 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3081

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3082 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3133 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3192

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3193 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3237

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3276



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3001 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3060

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3061 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3118

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3119 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3169

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3170 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3229

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3230 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3281

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3282 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3325



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    +VIP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 148/328 (45%), Gaps = 30/328 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H   LT  G V++ G  D
Sbjct: 3019 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3077

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3078 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3136

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3137 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3191

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3192 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3245

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3246 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3305

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAA 362
            QG   +         I  V+CG  H+ A
Sbjct: 3306 QGLEGQ--------KITRVACGSSHSVA 3325



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3073 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3133 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3190

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3191 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3247

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3248 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3296

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3297 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 150/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+ +G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDALAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +++I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEVIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 25/231 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSN 152
            ++G+L  G SE+    + P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    
Sbjct: 579 GNYGRLGHGSSED---EVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G+LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG
Sbjct: 636 GKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            E  +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 694 TEEHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 134/304 (44%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2955 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3012

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3013 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3064

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3065 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3124

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3125 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3176

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3177 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3218

Query: 423  TGAL 426
            + AL
Sbjct: 3219 SLAL 3222



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4014

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4015 YGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+++ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4075 LGHGNRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4126 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4186 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4231

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4232 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4264



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    PV+ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 3954 GSGTIYGWGHNHRGQLGGIEGAKV---------KVPTPCEALAALRPVQLIGGEQTLFAV 4004

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4005 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEV 4064

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  V+       VD        V+ G  H+A ++  G +
Sbjct: 4065 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVD--------VAAGGAHSACVTAAGDL 4116

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4117 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4155



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 85/238 (35%), Gaps = 74/238 (31%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G+V SWG G  GRLGHG    +           P++I    G            
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGK----------- 548

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                                  Q G H               + CG  ++  +T+ GEL
Sbjct: 549 -----------------------QAGKHVV------------HIACGSTYSAAITAEGEL 573

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
           YTWG    G LG GS +    P  V G      +D  C S      G   T A++E G++
Sbjct: 574 YTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGS------GDAQTLAVTENGQV 627

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            +WG G              G+LG G       P ++   +++  ++V CG   + AL
Sbjct: 628 WSWGDGDY------------GKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 148/320 (46%), Gaps = 40/320 (12%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGEL 144
           E   V+A G N  GQLG       S  P R++      + + ++  GY H+ A+T DG++
Sbjct: 6   ERSLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDV 65

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             +G    GQLG+G   +   P   +V  LSG    + A G E S+A+T  G + ++G  
Sbjct: 66  LGFGNGVKGQLGIGNTDSHSNP--QRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDN 123

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
            SG+LG       LG   +  E TP+ +  L   K+   A G  H+A +  +G +++FG+
Sbjct: 124 LSGQLG-------LGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGN 176

Query: 265 RAVDKMLFQEGNHARRPSLISKLP---------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
              D  L   G+    P +++  P         +  ++ CG  HT  LT+ G +Y WG N
Sbjct: 177 NR-DGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGEN 235

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
             G LG G     ++P  V  P S           + V+CG +HT A+++   + +G+G 
Sbjct: 236 GRGQLGTGDTQNRYTPSLVCKPLS-------AFKCIHVACGGQHTIAVTDCDDV-YGFG- 286

Query: 376 SHGTFSEDGHSSGGQLGHGN 395
                  D H   GQLG G 
Sbjct: 287 ------SDRH---GQLGLGR 297



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 145/314 (46%), Gaps = 24/314 (7%)

Query: 36  QRRFAALW--GNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALA---CGGAHTLFLTET 89
           +R  + +W  G    G+LG G+  +S + P    AF+    + +A   CG  HT  LT  
Sbjct: 4   RRERSLVWAVGGNSKGQLGNGTPTQSSFLPCRV-AFQLAPTQRIAEVFCGYEHTFALTSD 62

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
           G V   G    GQLGI     +S  P R+  L  K VV+++ G  HS A+T  G+LY +G
Sbjct: 63  GDVLGFGNGVKGQLGIGNTDSHS-NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFG 121

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N +GQLGLG         P KV  L      Q A G + +  +T  G++  +G    G 
Sbjct: 122 DNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGA 181

Query: 209 L---GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           L   GH  E   +          P+L+  L+G  V     G  H+  +   G VY +G+ 
Sbjct: 182 LGVAGHANEGPPI------VASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGEN 235

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
              ++   +  +   PSL+ K P S      V CGG HT  +T   ++Y +GS+ +G LG
Sbjct: 236 GRGQLGTGDTQNRYTPSLVCK-PLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294

Query: 322 IGSIDVL-HSPERV 334
           +G   V+   P R+
Sbjct: 295 LGRRGVIVPVPTRI 308



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+   G+LGLG         P       +  +  LACG  HT  LT +G ++  G N  
Sbjct: 120 FGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRD 179

Query: 101 GQLGIS--ENIGYSL---EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G LG++   N G  +    P  ++GLK K VVQI  G  H+ A+T  G +Y WG+N  GQ
Sbjct: 180 GALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQ 239

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P     + LS       A G + ++AVT    V  +G+   G+LG G+ 
Sbjct: 240 LGTGDTQNRYTP-SLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRR 298

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             I+          P  I  L G +VK    G  H+      G  YI G
Sbjct: 299 GVIV--------PVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFE-------KHSLKALACGGAHTLFLTETGCVYA 94
           ++GN   G LG+    +   P+V SA +       KH ++ + CG  HT+ LT  G VY 
Sbjct: 173 MFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQ-IGCGLQHTVALTAAGGVYC 231

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            G N  GQLG  +        L    L   + + ++ G  H+ A+T   ++Y +G + +G
Sbjct: 232 WGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHG 291

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           QLGLG++   ++P+PT++  L G   K 
Sbjct: 292 QLGLGRRGV-IVPVPTRIVRLGGRRVKN 318



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 105/285 (36%), Gaps = 73/285 (25%)

Query: 144 LYMWGKNSNGQLGLGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++  G NS GQLG G    +  +P     +        +   G+E + A+T  G VL +G
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G  G+LG G          + S   P+                           RV++ 
Sbjct: 70  NGVKGQLGIGN---------TDSHSNPQ---------------------------RVHLL 93

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             + V KM                         G  H+  LT  G+LY +G N +G LG+
Sbjct: 94  SGKGVVKM-----------------------AAGLEHSLALTESGDLYAFGDNLSGQLGL 130

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 381
           G     +   + Q P    P+ +    I  ++CG  HTA + S G++  +G     G   
Sbjct: 131 GH----NFTAKEQTPQKVPPLGR--AKITQLACGQDHTAVLTSSGELFMFG-NNRDGALG 183

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             GH++      G  +    P +V   +    +Q+ CG  HT AL
Sbjct: 184 VAGHAN-----EGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVAL 223


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3952 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4009

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4010 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4067

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4068 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4122

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4123 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4236

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4237 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4276

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4277 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4310



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2956 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3015

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3016 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3074

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3075 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3126 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3185

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3186 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3230

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3231 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3269



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2994 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3053

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3054 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3111

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3112 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3162

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3163 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3222

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3223 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3274

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3275 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3318



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3066 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3126 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3183

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3184 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3240

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3241 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3289

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3290 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3321



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3012 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3072 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3130

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3131 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3184

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3185 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3239

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3240 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3299

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3300 GLEGQ--------KITRVACGSSHSVA 3318



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2948 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3005

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3057

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3058 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3117

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3118 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3169

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3170 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3211

Query: 423  TGAL 426
            + AL
Sbjct: 3212 SLAL 3215



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3947 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4005

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4006 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4065

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4066 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4116

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4117 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4177 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4222

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4223 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4255



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3945 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3995

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3996 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4055

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4056 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4107

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4108 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4146


>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
           griseus]
 gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
          Length = 531

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
           TP  +  L+ V V     G+ H+  + + G +Y +G     ++     N+   P+  ++ 
Sbjct: 223 TPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMVE 282

Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           K    E   C   HT    T GG +Y WG
Sbjct: 283 KERVVEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                   TP ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 -------PTPIMV-EKERV-VEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P   + ++K  V      + +  +T + E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQETASIRKACV-FGASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   +++
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALQSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG +          + GQLG G+  + + PT +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGAN----------TYGQLGTGSKNNLLSPTPIMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSTHTSA 299



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK-------RVVSIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V   ++V   Q+ CG+ H
Sbjct: 197 LDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 13/139 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A +   +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG  S+N   S  P+ +   K+ VV+I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 265 LGTGSKNNLLSPTPIMVE--KERVVEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333


>gi|456888932|gb|EMF99869.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200701203]
          Length = 482

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +        + A   G  H L L   G V
Sbjct: 178 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 235

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S++P+ + GL  +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 236 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 294

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A   +   P KVE LSGI  KQ A G +  +A+   G++ SWG   S
Sbjct: 295 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 352

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L         AG   S  I +NG V  +G   
Sbjct: 353 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 404

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H   L   GE+Y WG N  G LG
Sbjct: 405 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 463



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 158/367 (43%), Gaps = 42/367 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 107 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 165

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AI  +G +Y WG N+ GQLG+G         +AA     PT V  ++       A GF
Sbjct: 166 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 223

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G        L + S    P  +  L  V   I  A
Sbjct: 224 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 276

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ENG VY++G      +    L         P  +  L   +++  G  H  
Sbjct: 277 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 336

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L S G +Y+WG N +G LGIG      SP     P   + +  I  +  + + G +  +
Sbjct: 337 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNP---TQILNITNASSVWAGGTQSFS 390

Query: 362 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGF 420
            +  G++  WG          +G+++   +G  N +    P     G +NV  +   CG 
Sbjct: 391 ILKNGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGA 439

Query: 421 NHTGALL 427
            H  ALL
Sbjct: 440 THNFALL 446



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 152/351 (43%), Gaps = 41/351 (11%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  ++G+LG G S       V+       ++ ++     +++ + + G VY  G N  GQ
Sbjct: 126 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 185

Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           LGI  N          G    P  + G+   V+  + G++H+  +  DG +  +G+N+ G
Sbjct: 186 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 244

Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           QLG G     A      P  V  LS +   Q   G E S A+T  G+V  WG    G LG
Sbjct: 245 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 302

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G+ S+      +  + TP  ++ L G+K    A G  H   +  NGR+Y +G  A  ++
Sbjct: 303 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASNGRIYSWGLNASGQL 355

Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC-LGIGSID 326
                   N    P+ I  +  +  V  GG  +  +   GE+  WG+N N   L IG  +
Sbjct: 356 GIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 415

Query: 327 VL--HSPER-VQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGW 373
            L  + P + V G            +++   CG  H  A + +G+I  WGW
Sbjct: 416 TLKVYEPNKAVVG----------IDNVIHFGCGATHNFALLGDGEIYGWGW 456



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 95  LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 153

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+     P  +
Sbjct: 154 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 209

Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
             + G+   +  A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 210 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 267

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +     +  +P +V+G      
Sbjct: 268 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG------ 321

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                + I  ++ G  H  A+ S G+I +WG   S
Sbjct: 322 ----LSGIKQIANGRDHILALASNGRIYSWGLNAS 352



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L +    +  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 292 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 349

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P     L       +  G   S +I  +GE+  WG N N   L
Sbjct: 350 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 409

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   + A+ G G++  WG    G LG 
Sbjct: 410 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 464


>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Glycine max]
          Length = 474

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 158/359 (44%), Gaps = 39/359 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWR------PVV--CSAFEKHSLKALACGGAHTLFLTETGCVY 93
           +WG    G+ G    E + R      P +  C A        +ACG  HT  +   G ++
Sbjct: 23  VWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGSLF 82

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGE--------- 143
             G NDFGQLG        L P ++  L+ E V+ +S G H S+ I    E         
Sbjct: 83  TWGANDFGQLGDGTEERRKL-PEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTRR 141

Query: 144 LYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           L++WG+N    L  L   A K   I  +V C           G    VA++  G + +WG
Sbjct: 142 LWVWGQNQGSNLPRLFWGAFKPNTIIREVSC-----------GAVHVVALSEEGLLQAWG 190

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
               G+LG G     L      S Y   L +  E VK+   + G  H+A I + G VY +
Sbjct: 191 YNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKIAKVSCGEYHTAVISDKGEVYTW 250

Query: 263 GDRAVDKM---LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
           G   + ++     Q G+    P  +  L   + ++V CGG HTC +T GG LY WG   +
Sbjct: 251 GLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCSVTQGGALYAWGGGRS 310

Query: 318 GCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGW 373
           G LG+G    L S      Q  F   PV  +   + LV+CG+ HT  ++S+G+I  WG+
Sbjct: 311 GQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGYSHTLISMSDGRIHGWGY 369



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 154/384 (40%), Gaps = 54/384 (14%)

Query: 20  LGSKLGICKRWISSTLQRRFAA---------LWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
            G   G   RW+     R   A          WG  D+G+LG G+ E R  P      E 
Sbjct: 52  FGCPAGTNARWLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLES 111

Query: 71  HSLKALACGGAHTLFLTET----GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
             +K+++CG   +  + E     G +    L  +GQ     N G +L  L     K   +
Sbjct: 112 EFVKSVSCGAHCSACIAEPHENDGTISTRRLWVWGQ-----NQGSNLPRLFWGAFKPNTI 166

Query: 127 --QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKV--ECLSGI 177
             ++S G  H  A++ +G L  WG N  GQLG G      + A +I    K   E    +
Sbjct: 167 IREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELV 226

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              + + G   +  ++  G+V +WG G  G+LGH              E  PR +  L+G
Sbjct: 227 KIAKVSCGEYHTAVISDKGEVYTWGLGNMGQLGHSS------LQYGDKELLPRRVVTLDG 280

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-------LF----QEGNHARRPSLISK 286
           + +K  A G +H+  + + G +Y +G     ++       LF     +     R   +  
Sbjct: 281 IFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLV 340

Query: 287 LPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
           +P   ++V  GY HT +  S G ++ WG N  G           + E+    +  SP+D 
Sbjct: 341 VPKGVQLVACGYSHTLISMSDGRIHGWGYNNYG---------QAANEKCTYAWYPSPIDW 391

Query: 346 ICTSIVLVSCGWKHTAAISEGKIL 369
               +  ++ G  H+A +++   L
Sbjct: 392 CVGEVRKLAAGGGHSAVLTDAYSL 415



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 150/368 (40%), Gaps = 69/368 (18%)

Query: 92  VYATGLNDFGQLG-----ISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGE 143
           +Y  G N  GQ G         I   L P      +G     + ++ G  H++AI  DG 
Sbjct: 21  IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGS 80

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           L+ WG N  GQLG G +  +   +P KV+ L   F K  + G   S  +    +  + G 
Sbjct: 81  LFTWGANDFGQLGDGTEERR--KLPEKVKQLESEFVKSVSCGAHCSACIAEPHE--NDGT 136

Query: 204 GGSGRL---GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
             + RL   G  Q S++         + P  I       ++  + G +H   + E G + 
Sbjct: 137 ISTRRLWVWGQNQGSNLPRLFWGA--FKPNTI-------IREVSCGAVHVVALSEEGLLQ 187

Query: 261 IFGDRAVDKM---LFQEG--------NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
            +G     ++   +  EG        ++A+      +L    +V CG YHT V++  GE+
Sbjct: 188 AWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKIAKVSCGEYHTAVISDKGEV 247

Query: 310 YTWGSNENGCLGIGSI---DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           YTWG    G LG  S+   D    P RV        +D I   I  V+CG  HT ++++G
Sbjct: 248 YTWGLGNMGQLGHSSLQYGDKELLPRRV------VTLDGI--FIKDVACGGVHTCSVTQG 299

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN----FGENVKAL-------Q 415
             L + WGG             GQLG G     +   + N    F  N+  L        
Sbjct: 300 GAL-YAWGGGR----------SGQLGLGPQTG-LFSCVANDSQTFFRNIPVLVVPKGVQL 347

Query: 416 VSCGFNHT 423
           V+CG++HT
Sbjct: 348 VACGYSHT 355



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 74/186 (39%), Gaps = 59/186 (31%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +V CG  HT  + S G L+TWG+N+ G LG G+ +    PE+V+   SE         + 
Sbjct: 64  DVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLESEF--------VK 115

Query: 352 LVSCGWKHTAAISE-----GKILT---WGWGGSHGT------------------------ 379
            VSCG   +A I+E     G I T   W WG + G+                        
Sbjct: 116 SVSCGAHCSACIAEPHENDGTISTRRLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAV 175

Query: 380 ----FSEDG------HSSGGQLGHGNDVDYIHPTIV---------NFGENVKALQVSCGF 420
                SE+G      ++  GQLG G   + +    +            E VK  +VSCG 
Sbjct: 176 HVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKIAKVSCGE 235

Query: 421 NHTGAL 426
            HT  +
Sbjct: 236 YHTAVI 241



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 15/122 (12%)

Query: 309 LYTWGSNENGCLG-IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEG 366
           +Y WG N++G  G  G  D L  P+++       P        + V+CG +HTAAI S+G
Sbjct: 21  IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAG-TNARWLDVACGREHTAAIASDG 79

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            + TWG             +  GQLG G +     P  V   E+     VSCG + +  +
Sbjct: 80  SLFTWG------------ANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCSACI 127

Query: 427 LE 428
            E
Sbjct: 128 AE 129


>gi|171915079|ref|ZP_02930549.1| RCC1 repeat domain protein [Verrucomicrobium spinosum DSM 4136]
          Length = 1933

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 178/398 (44%), Gaps = 47/398 (11%)

Query: 33  STLQRRFAALWGNGDY--GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           S L +    LWG G    GRLG  S   R  P+  S     ++  L  GG +T  +   G
Sbjct: 422 SVLMKADGTLWGVGYSAGGRLGGASPSPRKLPMPVSGVT--TVATLKAGGDNTGVVRGNG 479

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            V   G N  GQLG    +  S+ P++ +GL   V  +  GY+H+     DG ++ +G N
Sbjct: 480 AVLGFGYNHAGQLGNGGVLPSSV-PVQPTGLSG-VRDVGVGYNHTVVAKTDGTVWSYGLN 537

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           S GQLG+   A+++ P+  +V  LS    K  A+G++ S+ +   G V  +G+  +G LG
Sbjct: 538 SLGQLGVTAGASQLTPV--QVTALSD--AKAVAVGYDFSLVLKTDGTVWGFGSNTNGTLG 593

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G   S        S  TP  +     V +   AAG  HSA +  +G V+ FG     ++
Sbjct: 594 DGTFVS--------SRATPAQVSGT--VDITAVAAGRGHSALLKSDGTVWTFGGNTYGQL 643

Query: 271 LFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              +G    R  P   + L  +  V  GG HT VL   G ++ +G N +G LG G+    
Sbjct: 644 --GDGTTTSRYAPVQATGLTGAVAVAAGGRHTVVLKGDGTVWAFGGNASGQLGDGTTTTR 701

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 388
            +  ++ G           T++V ++ G +HT A+            S GT    G ++ 
Sbjct: 702 LTAVQMSG----------LTNVVAIAVGEEHTVAVR-----------SDGTVWAAGKNAS 740

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GQLG G   D +  T V       AL V+ G  HT AL
Sbjct: 741 GQLGDGTVTDRL--TAVQVPGVTHALAVAAGRGHTLAL 776



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 153/323 (47%), Gaps = 38/323 (11%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
           K LA G AHT+   E G V+  G  + GQLG+S   G S  P++ +G   +VV ++ G  
Sbjct: 112 KNLAAGHAHTVVAREDGTVWGVGAAELGQLGVSLT-GSSALPVQ-AGSLTDVVCVTAGAA 169

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H++A+  DG L+M+G N+ GQLGLG  +  V   PT+V  LSG+ T   A G   ++ + 
Sbjct: 170 HTAAVRSDGTLWMYGLNTFGQLGLGYASVSVWS-PTQVGALSGV-TADVAAGDLHTLVLK 227

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G V  +G  G G LG G          +T   +P     L    V   AAG LHS  +
Sbjct: 228 TDGTVWGFGENGVGNLGDGT---------TTGRVSPVQATGL--TDVVDLAAGSLHSLAL 276

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSL-ISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
             +G V+ FG    +  L    N  R  ++ +S L     +   G H+  L S G ++ +
Sbjct: 277 KSDGTVWAFGAN-FEGQLGDGTNTMRLTAVQVSALTDVVAIAAAGRHSLALKSDGTVWAF 335

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G+NE G LG G+    ++P +V G           T +V ++ G  H+ A+         
Sbjct: 336 GANEAGQLGDGTTTSRNAPVQVSG----------LTGVVAIAAGGAHSLALK-------- 377

Query: 373 WGGSHGTFSEDGHSSGGQLGHGN 395
              + GT    G ++ GQLG G+
Sbjct: 378 ---ADGTVWAFGANTYGQLGDGS 397



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 179/383 (46%), Gaps = 46/383 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  + G+LG G+  SR  PV  S      + A+A GGAH+L L   G V+A G N +GQ
Sbjct: 335 FGANEAGQLGDGTTTSRNAPVQVSGLT--GVVAIAAGGAHSLALKADGTVWAFGANTYGQ 392

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   ++     P+ ++    +V  I+ G  HS  +  DG L+  G ++ G+LG    + 
Sbjct: 393 LG-DGSLTAGTVPVEMA--ITDVAAIAAGAEHSVLMKADGTLWGVGYSAGGRLGGASPSP 449

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+P  V  ++ + T +A  G + +  V G G VL +G   +G+LG+G      G L 
Sbjct: 450 RKLPMP--VSGVTTVATLKA--GGDNTGVVRGNGAVLGFGYNHAGQLGNG------GVLP 499

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S+    P  +  +  V V     G+ H+     +G V+ +G  ++ ++    G     P 
Sbjct: 500 SSVPVQPTGLSGVRDVGV-----GYNHTVVAKTDGTVWSYGLNSLGQLGVTAGASQLTPV 554

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSES 341
            ++ L  ++ V  G   + VL + G ++ +GSN NG LG G+ +    +P +V G     
Sbjct: 555 QVTALSDAKAVAVGYDFSLVLKTDGTVWGFGSNTNGTLGDGTFVSSRATPAQVSG----- 609

Query: 342 PVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                   I  V+ G  H+A + S+G +  W +GG+  T+        GQLG G      
Sbjct: 610 -----TVDITAVAAGRGHSALLKSDGTV--WTFGGN--TY--------GQLGDGTTTSRY 652

Query: 401 HPTIVNFGENVKALQVSCGFNHT 423
            P  V       A+ V+ G  HT
Sbjct: 653 AP--VQATGLTGAVAVAAGGRHT 673



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 169/399 (42%), Gaps = 49/399 (12%)

Query: 33  STLQRRFAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALAC---GGAHTLFLT 87
           + + R    +WG G  + G+LG+    S   PV     +  SL  + C   G AHT  + 
Sbjct: 121 TVVAREDGTVWGVGAAELGQLGVSLTGSSALPV-----QAGSLTDVVCVTAGAAHTAAVR 175

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
             G ++  GLN FGQLG+         P ++  L      ++ G  H+  +  DG ++ +
Sbjct: 176 SDGTLWMYGLNTFGQLGLGYASVSVWSPTQVGALSGVTADVAAGDLHTLVLKTDGTVWGF 235

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+N  G LG G    +V P+  +   L+ +     A G   S+A+   G V ++GA   G
Sbjct: 236 GENGVGNLGDGTTTGRVSPV--QATGLTDVV--DLAAGSLHSLALKSDGTVWAFGANFEG 291

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G          +T   T   +  L  V V IAAAG  HS  +  +G V+ FG    
Sbjct: 292 QLGDGT---------NTMRLTAVQVSALTDV-VAIAAAG-RHSLALKSDGTVWAFGANEA 340

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++          P  +S L     +  GG H+  L + G ++ +G+N  G LG GS+  
Sbjct: 341 GQLGDGTTTSRNAPVQVSGLTGVVAIAAGGAHSLALKADGTVWAFGANTYGQLGDGSLTA 400

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 387
                         PV+   T +  ++ G +H+  +     L WG           G+S+
Sbjct: 401 -----------GTVPVEMAITDVAAIAAGAEHSVLMKADGTL-WGV----------GYSA 438

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           GG+LG  +      P  V+    V  L+   G ++TG +
Sbjct: 439 GGRLGGASPSPRKLPMPVSGVTTVATLK--AGGDNTGVV 475



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 26/282 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G    G+LG+ +  S+  PV  +A      KA+A G   +L L   G V+  G N  G 
Sbjct: 534 YGLNSLGQLGVTAGASQLTPVQVTALSDA--KAVAVGYDFSLVLKTDGTVWGFGSNTNGT 591

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +     P ++SG   ++  ++ G  HS+ +  DG ++ +G N+ GQLG G   +
Sbjct: 592 LGDGTFVSSRATPAQVSG-TVDITAVAAGRGHSALLKSDGTVWTFGGNTYGQLGDGTTTS 650

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +   L+G      A G   +V + G G V ++G   SG+LG G  ++ L  + 
Sbjct: 651 RYAPV--QATGLTGAV--AVAAGGRHTVVLKGDGTVWAFGGNASGQLGDGTTTTRLTAV- 705

Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                      ++ G+   +A A G  H+  +  +G V+  G  A  ++   +G    R 
Sbjct: 706 -----------QMSGLTNVVAIAVGEEHTVAVRSDGTVWAAGKNASGQL--GDGTVTDRL 752

Query: 282 SLISKLP---YSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           + + ++P   ++  V  G  HT  L   G L +WG+ E G L
Sbjct: 753 TAV-QVPGVTHALAVAAGRGHTLALKIDGTLLSWGAGEQGQL 793



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 10/179 (5%)

Query: 33  STLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           S L +    +W  G   YG+LG G+  SR+ PV  +        A+A GG HT+ L   G
Sbjct: 623 SALLKSDGTVWTFGGNTYGQLGDGTTTSRYAPVQATGLT--GAVAVAAGGRHTVVLKGDG 680

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            V+A G N  GQLG        L  +++SGL   VV I+ G  H+ A+  DG ++  GKN
Sbjct: 681 TVWAFGGNASGQLGDGTTT-TRLTAVQMSGLTN-VVAIAVGEEHTVAVRSDGTVWAAGKN 738

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           ++GQLG G    ++    T V+          A G   ++A+   G +LSWGAG  G+L
Sbjct: 739 ASGQLGDGTVTDRL----TAVQVPGVTHALAVAAGRGHTLALKIDGTLLSWGAGEQGQL 793


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 181/371 (48%), Gaps = 40/371 (10%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLND 99
           WGN   G LGLG +E  +   P     FE  +++K++ACG  HTL +TE G +YA G ND
Sbjct: 4   WGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSND 63

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           FGQLG   + G   +  +I G++  V+  ++ G  HS A+   G+LY WG +S GQLGL 
Sbjct: 64  FGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLE 120

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +   P  V+ L+ +   Q + G++  +A+T  G++ +WG+   G+LG G     +
Sbjct: 121 TDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNV 179

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P L+  L G+ +   A G  HS  + ++G V+ +G     ++        
Sbjct: 180 S--------KPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL 231

Query: 279 RRPSLISKLPYSE-EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P+ +  +   + + + GG    V LT  G ++T G+   G LG GS      P +V  
Sbjct: 232 SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKV-- 289

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                 ++ + +++  V+CG +HT  +  S+G++ ++G G            S GQLG  
Sbjct: 290 ------LELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLG------------SVGQLGTK 331

Query: 395 NDVDYIHPTIV 405
           + ++   P +V
Sbjct: 332 SSINSNTPQLV 342



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 141/298 (47%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+G+LG     ++ + +     E   + ++ACG AH++ L E G +Y  G +  GQL
Sbjct: 60  GSNDFGQLGHDGCRTKLQKI--PGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQL 117

Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  + G   +P  +  L   + VQIS GY H  A+T  GELY WG N  GQLGLG    
Sbjct: 118 GLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPG 177

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V   PT V  L G+     A G   S  V+  G V  WG    G+LG   ++S+     
Sbjct: 178 NVSK-PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL----- 231

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                +P  +K +  VKVK  A G   S  +  +G V+  G     ++     ++   P 
Sbjct: 232 ----SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPR 287

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   +V CG  HT  L  S G +Y++G    G LG  S    ++P+ V GP
Sbjct: 288 KVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLVLGP 345



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 73/334 (21%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV---ECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           +Y WG   NG+LGLG      I  P ++   E ++ I  K  A G   ++AVT  G++ +
Sbjct: 1   MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNI--KSVACGNNHTLAVTEDGQLYA 58

Query: 201 WGAGGSGRLGH-----------GQESSIL-----GFLRSTS------------------- 225
            G+   G+LGH           G ES ++     G   S +                   
Sbjct: 59  CGSNDFGQLGHDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLG 118

Query: 226 -------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                  +Y P+++K L  + +   + G+ H   +  +G +Y +G +      L     +
Sbjct: 119 LETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGN 178

Query: 278 ARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +P+L++    LP S  + CGGYH+ V++  G ++ WG N+ G LGI S   L SP ++
Sbjct: 179 VSKPTLVNSLVGLPIS-FIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQL 237

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
           +   +          +  ++ G   +  ++ +G + T G G              GQLGH
Sbjct: 238 KTIRT--------VKVKYIAGGEDFSVFLTYDGGVFTCGAGMY------------GQLGH 277

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           G+  + I P  V         QV+CG  HT  L+
Sbjct: 278 GSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLV 311


>gi|418719204|ref|ZP_13278404.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. UI 09149]
 gi|421094338|ref|ZP_15555056.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200801926]
 gi|410362760|gb|EKP13795.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200801926]
 gi|410744357|gb|EKQ93098.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. UI 09149]
          Length = 506

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +        + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S++P+ + GL  +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A   +   P KVE LSGI  KQ A G +  +A+   G++ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L         AG   S  I +NG V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H   L   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 487



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 158/367 (43%), Gaps = 42/367 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AI  +G +Y WG N+ GQLG+G         +AA     PT V  ++       A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G        L + S    P  +  L  V   I  A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 300

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ENG VY++G      +    L         P  +  L   +++  G  H  
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L S G +Y+WG N +G LGIG      SP     P   + +  I  +  + + G +  +
Sbjct: 361 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNP---TQILNITNASSVWAGGTQSFS 414

Query: 362 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGF 420
            +  G++  WG          +G+++   +G  N +    P     G +NV  +   CG 
Sbjct: 415 ILKNGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGA 463

Query: 421 NHTGALL 427
            H  ALL
Sbjct: 464 THNFALL 470



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 149/348 (42%), Gaps = 35/348 (10%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  ++G+LG G S       V+       ++ ++     +++ + + G VY  G N  GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 209

Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           LGI  N          G    P  + G+   V+  + G++H+  +  DG +  +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268

Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           QLG G     A      P  V  LS +   Q   G E S A+T  G+V  WG    G LG
Sbjct: 269 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 326

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G+ S+      +  + TP  ++ L G+K    A G  H   +  NGR+Y +G  A  ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASNGRIYSWGLNASGQL 379

Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC-LGIGSID 326
                   N    P+ I  +  +  V  GG  +  +   GE+  WG+N N   L IG  +
Sbjct: 380 GIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGW 373
            L   E  +             +++   CG  H  A + +G+I  WGW
Sbjct: 440 TLKVYEPNKAVVG-------IDNVIHFGCGATHNFALLGDGEIYGWGW 480



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+     P  +
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233

Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
             + G+   +  A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +     +  +P +V+G      
Sbjct: 292 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG------ 345

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                + I  ++ G  H  A+ S G+I +WG   S
Sbjct: 346 ----LSGIKQIANGRDHILALASNGRIYSWGLNAS 376



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L +    +  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P     L       +  G   S +I  +GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   + A+ G G++  WG    G LG 
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 488


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4244 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4283

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4284 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4184 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4229

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4230 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
           +  K  P PT    L G+ TK     A G  QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4002

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4003 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4114

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4115 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 163/327 (49%), Gaps = 29/327 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V S+ +   +  LA       H+L L E+G V++ G  DF
Sbjct: 3382 GEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDF 3441

Query: 101  GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ E VVQ++ G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3442 GKLG-HGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGS 3500

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             A K   +P +V  L G    Q A G   +  V T G  V ++G G  G+LG       L
Sbjct: 3501 VANK--KLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLG-------L 3551

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
            G+  +T +  P+ ++ +  + +K    G   +  + ++G+V++ G DR     LF+E   
Sbjct: 3552 GY--ATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRE-RA 3608

Query: 278  ARRPSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              +P +++ L  YS E++  G  H   LT+ G++  WG    G LG+  + ++  PE + 
Sbjct: 3609 VFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEII- 3667

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
               S+  + QI T       G  H+AA
Sbjct: 3668 TELSDKGIRQIST-------GRTHSAA 3687



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 46/334 (13%)

Query: 44  GNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           G G YGRLGLG   ++  P  ++     K  L +      HTL L ETG VY+ G  D+G
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRILLDCVVK-KLSSSKGSDGHTLALAETGVVYSWGDGDYG 462

Query: 102 QLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   N     +P RI+G  L K +  I  GY HS+A+T DG+LY WG+  +G+LG G 
Sbjct: 463 KLG-HGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGD 521

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
             A+   +PT+V  L+ + +   A G   ++ V+  GK V S+G+G  G+LG G+   + 
Sbjct: 522 SNARY--VPTQVAGLAEVGS--VACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKV- 576

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVD 268
                   Y P++++ L+G+ ++   AG   S  +   G VY +G          D  V+
Sbjct: 577 --------YRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGKGSADAIVN 628

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
             ++ E     R   IS          G  H   LT   E++ WG+N  G  G G     
Sbjct: 629 LPMYVEDLAQYRIVDIS---------AGDNHCLALTDEHEVFAWGTNSMGQCGQG----- 674

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           H+   +  P     ++ +  SI  +S G  H+ A
Sbjct: 675 HTCSPITRPLKVIGLEGV--SIRQISAGTSHSMA 706



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 169/370 (45%), Gaps = 48/370 (12%)

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL 121
           VCSA E  S   +         + E   VY  G N   QL  G  E I   L P++ S +
Sbjct: 330 VCSAVETTSESEVG--------VYEKSDVYVWGSNSSHQLAEGNQEKI---LMPVK-SKM 377

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTK 180
             +V Q+  G + + AI  DG +   GK S G+LGLG+ + + +P    ++C +  + + 
Sbjct: 378 FTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSS 437

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           + + G   ++A+   G V SWG G  G+LGHG          +T +   R+     G  +
Sbjct: 438 KGSDG--HTLALAETGVVYSWGDGDYGKLGHGN--------CATHKQPERITGPFLGKTI 487

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K   AG+ HSA + ++G++Y +G+    ++   + N    P+ ++ L     V CG  HT
Sbjct: 488 KYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSVACGSSHT 547

Query: 301 CVLTSGGE-LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
            V++  G+ ++++GS E+G LG G +  ++ P+ V+       + ++C         W  
Sbjct: 548 LVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEA-LQGLTIQKVCAG------TWFS 600

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSC 418
            A  + G++ TWG              SG  LG G+ D     P  V      + + +S 
Sbjct: 601 MALTTAGEVYTWG--------------SGAILGKGSADAIVNLPMYVEDLAQYRIVDISA 646

Query: 419 GFNHTGALLE 428
           G NH  AL +
Sbjct: 647 GDNHCLALTD 656



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 128/285 (44%), Gaps = 39/285 (13%)

Query: 145  YMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            YMWG + +GQL  LG  A+    +P +VE  S    ++   G   +  +   G VL+ G 
Sbjct: 3330 YMWGSDRHGQLAELGYSAS----VPVQVESFS--IARKIICGQNCTFVIQSDGTVLACGE 3383

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVY 260
            G  GRLG G    +         ++  +I  L+G  +   A       HS  + E+G V+
Sbjct: 3384 GSYGRLGQGNSDDL---------HSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVF 3434

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
             +GD    K+     +  RRP  I  L   +  +V CG  H+ V+TS G+L+T+G+ + G
Sbjct: 3435 SWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFG 3494

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
             LG+GS+     PERV        + Q       V+CG  HTA +S   +  W +G   G
Sbjct: 3495 KLGLGSVANKKLPERVMA-LEGYRIGQ-------VACGLNHTACVSTDGMTVWTFG--EG 3544

Query: 379  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
             +        G+LG G     + P  V    N+   +V CG + T
Sbjct: 3545 DY--------GKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLT 3581



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GD+G+LG G+ + + RP    A +   +  +ACG  H+  +T  G ++  G  DFG+
Sbjct: 3436 WGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGK 3495

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
            LG+       L P R+  L+   + Q++ G +H++ ++ DG  ++ +G+   G+LGLG  
Sbjct: 3496 LGLGSVANKKL-PERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYA 3554

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              K+  +P KVE +  +  K+   G   ++ +T  GKV      G  R+           
Sbjct: 3555 TMKL--LPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVF---VCGIDRMPWH------SL 3603

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R  + + P+++  L    ++  A G  H   +   G+V  +G     ++     +  R 
Sbjct: 3604 FRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRH 3663

Query: 281  PSLISKL 287
            P +I++L
Sbjct: 3664 PEIITEL 3670



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 170/401 (42%), Gaps = 57/401 (14%)

Query: 40   AALWGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            A +WG+  +G+L  LG   S   PV   +F     + + CG   T  +   G V A G  
Sbjct: 3329 AYMWGSDRHGQLAELGYSASV--PVQVESFS--IARKIICGQNCTFVIQSDGTVLACGEG 3384

Query: 99   DFGQLGI-------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
             +G+LG        S ++  SL+   I+ L   V   S G  HS A+   GE++ WG   
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVG--SDG--HSLALAESGEVFSWGDGD 3440

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             G+LG G    +    P ++E L      Q A GF+ S  VT  GK+ ++G G  G+LG 
Sbjct: 3441 FGKLGHGNPDRQ--RRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL 3498

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKM 270
            G  +         ++  P  +  LEG ++   A G  H+AC+  +G  V+ FG+    K+
Sbjct: 3499 GSVA---------NKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKL 3549

Query: 271  LFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                      P  +  +     ++V CG + T  LT  G+++  G           ID +
Sbjct: 3550 GLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCG-----------IDRM 3598

Query: 329  --HSPERVQGPFSESPVDQICT-SIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 384
              HS  R +  F    +  +   SI  ++ G +H   ++  GK+L WG  G         
Sbjct: 3599 PWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGE-------- 3650

Query: 385  HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                GQLG  +     HP I+    +    Q+S G  H+ A
Sbjct: 3651 ----GQLGLPHVSLVRHPEIITELSDKGIRQISTGRTHSAA 3687



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 16/210 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   +R+ P   +   +  + ++ACG +HTL +++ G  V++ G  + G
Sbjct: 509 WGEGDHGRLGHGDSNARYVPTQVAGLAE--VGSVACGSSHTLVVSKDGKTVWSFGSGEHG 566

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  E +G    P  +  L+   +Q +  G   S A+T  GE+Y WG  S   LG G  
Sbjct: 567 KLGTGE-LGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG--SGAILGKG-S 622

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  ++ +P  VE L+       + G    +A+T   +V +WG    G+ G G   S +  
Sbjct: 623 ADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPIT- 681

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
                   P  +  LEGV ++  +AG  HS
Sbjct: 682 -------RPLKVIGLEGVSIRQISAGTSHS 704



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 18/228 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  +  +P  +   F   ++K +  G  H+  +T+ G +Y  G  D G
Sbjct: 456 WGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHG 515

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGK 159
           +LG  + N  Y   P +++GL  EV  ++ G  H+  ++ DG+ ++ +G   +G+LG G+
Sbjct: 516 RLGHGDSNARYV--PTQVAGL-AEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGE 572

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                +  P  VE L G+  ++   G   S+A+T  G+V +WG+G    LG G   +I+ 
Sbjct: 573 LGK--VYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI--LGKGSADAIVN 628

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                    P  +++L   ++   +AG  H   + +   V+ +G  ++
Sbjct: 629 L--------PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSM 668



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+G++G+LG G L   +RP V  A +  +++ +  G   ++ LT  G VY  G      
Sbjct: 560 FGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILG 619

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G ++ I     P+ +  L +  +V IS G +H  A+T + E++ WG NS GQ G G   
Sbjct: 620 KGSADAIVNL--PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTC 677

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +  I  P KV  L G+  +Q + G   S+A T 
Sbjct: 678 SP-ITRPLKVIGLEGVSIRQISAGTSHSMAWTS 709



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 20/158 (12%)

Query: 271  LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            L + G  A  P  +     + +++CG   T V+ S G +   G    G LG G+ D LHS
Sbjct: 3340 LAELGYSASVPVQVESFSIARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHS 3399

Query: 331  PERVQGPFSESPVDQICTSIVLVSCGWK-HTAAISE-GKILTWGWGGSHGTFSEDGHSSG 388
               +      S +     + +  S G   H+ A++E G++ +WG     G F        
Sbjct: 3400 LSVI------SSLQGFVITDLATSVGSDGHSLALAESGEVFSWG----DGDF-------- 3441

Query: 389  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LGHGN      P  +   +  + +QV+CGF H+  +
Sbjct: 3442 GKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVV 3479


>gi|398332633|ref|ZP_10517338.1| RCC1 domain-containing protein [Leptospira alexanderi serovar
           Manhao 3 str. L 60]
          Length = 527

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 138/299 (46%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +    +   + A   G  H L L   G V
Sbjct: 223 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 280

Query: 93  YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S++P+ + GL+ +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 281 VAFGQNNVGQLGNGANNLNADSFSMDPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 339

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A      IP KVE L GI  KQ A G +  +A+   G++ SWG   S
Sbjct: 340 RNQYGNLGNGRLSAANAAQSIPVKVEGLPGI--KQIANGRDHILALASDGRIYSWGLNAS 397

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L  +      AG   S  I ++G V  +G   
Sbjct: 398 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 449

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H  VL   GE+Y WG N  G LG
Sbjct: 450 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 508



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 160/371 (43%), Gaps = 50/371 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 152 LSAGGAHSGFL-KNGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 210

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AI  +G +Y WG N+ GQLG+G         +AA     PT V  +        A GF
Sbjct: 211 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAV--MGAYGF 268

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G  +     L + S    P  +  L  V   I  A
Sbjct: 269 NHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMDPVAVVGLRDVIQVI--A 321

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ENG VY++G      +        N A+  P  +  LP  +++  G  H  
Sbjct: 322 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEGLPGIKQIANGRDHIL 381

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW---- 357
            L S G +Y+WG N +G LGIG            G  + +P+     +I+  S  W    
Sbjct: 382 ALASDGRIYSWGLNASGQLGIGG----------NGSPNPTPIPTQVLNILNASSVWAGGT 431

Query: 358 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQV 416
           +  + +  G++  WG          +G+++   +G  N +    P     G +NV  +  
Sbjct: 432 QSFSILKSGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHF 480

Query: 417 SCGFNHTGALL 427
            CG  H   LL
Sbjct: 481 GCGATHNFVLL 491



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 140 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSI 198

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+  +   P L
Sbjct: 199 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 254

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
           +  ++     + A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 255 VPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMDPVAVVG 312

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS----PERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +   ++    P +V+G      
Sbjct: 313 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEG------ 366

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                  I  ++ G  H  A+ S+G+I +WG   S
Sbjct: 367 ----LPGIKQIANGRDHILALASDGRIYSWGLNAS 397



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L     ++  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 337 VWGRNQYGNLGNGRLSAANAAQSIPVKVEGLP--GIKQIANGRDHILALASDGRIYSWGL 394

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P+    L       +  G   S +I   GE+  WG N N   L
Sbjct: 395 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 454

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   +  + G G++  WG    G LG 
Sbjct: 455 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 509


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3246 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3303

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3304 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3361

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3362 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3416

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3417 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3530

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 3531 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 3570

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 3571 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3604



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2250 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2309

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2310 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2368

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2369 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2420 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2479

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2480 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2524

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2525 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2563



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2288 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2347

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2348 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2405

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2406 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2456

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2457 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2516

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2517 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 2568

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2569 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2360 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2420 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2477

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2478 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2534

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2535 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2583

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2584 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2615



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2306 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2366 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2424

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2425 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2478

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2479 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2533

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2534 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2593

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 2594 GLEGQ--------KITRVACGSSHSVA 2612



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 135/302 (44%), Gaps = 45/302 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2242 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2299

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2353

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 2354 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2413

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILT 370
              E G LG G       P+ V+              ++ V+CG +     A   EG + +
Sbjct: 2414 LGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLVFS 2465

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTG 424
            WG     G F        G+LG G           N  +N++ L      Q+ CG   + 
Sbjct: 2466 WG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSL 2507

Query: 425  AL 426
            AL
Sbjct: 2508 AL 2509



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3241 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3299

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3300 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3359

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3360 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3410

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3411 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 3471 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 3516

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3517 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3549



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3239 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3289

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3290 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3349

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3350 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 3401

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 3402 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 3440


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4242 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4281

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4282 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3191 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3235

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3236 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3279

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3280 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3305 GLEGQ--------KITRVACGSSHSVA 3323



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3174

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3175 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3216

Query: 423  TGAL 426
            + AL
Sbjct: 3217 SLAL 3220



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4182 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4227

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4000

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4112

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4113 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151


>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
          Length = 531

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     + +L+ G G H +  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A++ DG+LY WG N+ GQ+G G  A +  P P
Sbjct: 114 QGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            +V  CL G      A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP  +  L GV +   A G+ H+  + + G +Y +G     ++    GN + + S +  +
Sbjct: 223 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQIM 280

Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
              E VV    C   HT    T  G++Y WG
Sbjct: 281 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L+  G +YA G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P R+S     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   P +V  L G+   Q A G+  ++A+T  G + +WGA   G+LG G +S+ L 
Sbjct: 218 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
            +        +++ E E V V+IAA    H SA   ++G+VY++G
Sbjct: 276 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 38/319 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  ++ ++K  V   T  + +  IT + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEVASIRKACV-FGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69

Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
            L G   K ++L +      V  T  G+V +WG  G  +LG+G  +  +  ++     T 
Sbjct: 70  ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 124

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
            LIK     KV   A G  HS  +  +G +Y +G     ++      +   P  +S    
Sbjct: 125 LLIK-----KVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ 179

Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
            + VV   CG   +  + S GE+Y WG N NG LG+G+     +P RV      + +  +
Sbjct: 180 GKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQLTPCRV------AALHGV 233

Query: 347 CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
           C  I+ ++CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  + 
Sbjct: 234 C--ILQIACGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPVQIM 280

Query: 407 FGENVKALQVSCGFNHTGA 425
             +       +C   HT A
Sbjct: 281 MEKERVVEIAACHSAHTSA 299



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 39/249 (15%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ +T   +V  +G   S  LG G   S +          P+ ++ L G K+   + G 
Sbjct: 33  EAIYITHNDEVFVFGLNCSNCLGTGDNQSTI---------VPKKLEALCGKKISSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYHT 300
             H     E+G VY +G     ++     N    P       LI K+    EV CG +H+
Sbjct: 84  GPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVV---EVACGSHHS 140

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L+  G+LY WG N  G +G GS     +P RV        V       V ++CG   +
Sbjct: 141 MALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMV-------VGIACGQTSS 193

Query: 361 -AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A +S G++  WG+ G+            GQLG GN+ + + P  V     V  LQ++CG
Sbjct: 194 MAVVSNGEVYGWGYNGN------------GQLGLGNNGNQLTPCRVAALHGVCILQIACG 241

Query: 420 FNHTGALLE 428
           + HT AL +
Sbjct: 242 YAHTLALTD 250



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  P   +A     +  +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P++I   K+ VV+I+  +  H S+A T  G++YMWG+   GQ      
Sbjct: 265 LG-TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFACTDDVF 333


>gi|383319323|ref|YP_005380164.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
 gi|379320693|gb|AFC99645.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
          Length = 476

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 155/325 (47%), Gaps = 25/325 (7%)

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
           SA  +  +K +A G  HT+ L + G V+A G N +G+ G   +    L+P+ I+GL+  V
Sbjct: 24  SAGAQIGVKKVAVGLFHTVALADDGTVWAWGSNTYGECGEGSSDDILLKPVMINGLEG-V 82

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             ++ G + S A+  DG ++ WG N  GQLG+G       P P +V  L+ +    A   
Sbjct: 83  KDVAVGNNFSMALKSDGTVWTWGDNRYGQLGIGTADDGRHPEPVQVPGLTNVIAISA--D 140

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY------TPRLIKELEGVK 239
           F+ ++A+   G V +WG+   G+LG G+   I   L  + E+      +P ++  L+ V 
Sbjct: 141 FQLAMALKDDGTVWAWGSNSYGQLGDGKPIDIPPPLTYSKEWDMQNKPSPVMVSGLDHV- 199

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN----HARRPSLISKLPYSEEVVC 295
           V I A+G+  +  + ++G V+ +G        + + N    +   P  I  L   ++  C
Sbjct: 200 VSIDASGW-QAFAVKDDGTVWGWGQNTCTLGEWSKNNENSLYTSTPVQIVGLTDVKKACC 258

Query: 296 -GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC--TSIVL 352
            GG     L   G ++ WG +  G LG G +      ++V  P       Q+   T IV 
Sbjct: 259 LGGLSAVALKKDGTVWAWGEDRYGVLGNGEVKSYPDVDKVYNPI------QVIGLTDIVD 312

Query: 353 VSCGWKHTAAISEGKILTWGWGGSH 377
           +SCG  H+ A+ +   + W WG ++
Sbjct: 313 ISCGGAHSLALKDDGTV-WAWGKNY 336



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 155/358 (43%), Gaps = 54/358 (15%)

Query: 43  WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG  G GS +    +PV+ +  E   +K +A G   ++ L   G V+  G N +G
Sbjct: 53  WGSNTYGECGEGSSDDILLKPVMINGLE--GVKDVAVGNNFSMALKSDGTVWTWGDNRYG 110

Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLGI + + G   EP+++ GL   V+ IS  +  + A+  DG ++ WG NS GQLG GK 
Sbjct: 111 QLGIGTADDGRHPEPVQVPGLTN-VIAISADFQLAMALKDDGTVWAWGSNSYGQLGDGKP 169

Query: 161 AAKVIPI-------------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
                P+             P  V  L  + +  A+ G+ Q+ AV   G V  WG     
Sbjct: 170 IDIPPPLTYSKEWDMQNKPSPVMVSGLDHVVSIDAS-GW-QAFAVKDDGTVWGWG----- 222

Query: 208 RLGHGQESSILGFLRSTSEY-----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
                Q +  LG     +E      TP  I  L  VK K    G L +  + ++G V+ +
Sbjct: 223 -----QNTCTLGEWSKNNENSLYTSTPVQIVGLTDVK-KACCLGGLSAVALKKDGTVWAW 276

Query: 263 GDRAV------DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G+         +   + + +    P  +  L    ++ CGG H+  L   G ++ WG N 
Sbjct: 277 GEDRYGVLGNGEVKSYPDVDKVYNPIQVIGLTDIVDISCGGAHSLALKDDGTVWAWGKNY 336

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
            G LG  + +   +P RV  P +++           +S G+    AI +   + W WG
Sbjct: 337 AGQLGDSTNESRGTPCRVPIPAAKA-----------ISAGYYSNVAIDKDDNV-WAWG 382



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 11/150 (7%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-----LEPLRISGLKKEVVQI 128
           KA   GG   + L + G V+A G + +G LG  E   Y        P+++ GL  ++V I
Sbjct: 255 KACCLGGLSAVALKKDGTVWAWGEDRYGVLGNGEVKSYPDVDKVYNPIQVIGLT-DIVDI 313

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  HS A+  DG ++ WGKN  GQLG     ++  P    +        K  + G+  
Sbjct: 314 SCGGAHSLALKDDGTVWAWGKNYAGQLGDSTNESRGTPCRVPIPA-----AKAISAGYYS 368

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           +VA+     V +WG    G+LG G+   +L
Sbjct: 369 NVAIDKDDNVWAWGMDDYGQLGDGEHGEML 398



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 34/173 (19%)

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDR--------AVDKMLFQEGNHARRPSLISKLPY 289
           + VK  A G  H+  + ++G V+ +G          + D +L        +P +I+ L  
Sbjct: 29  IGVKKVAVGLFHTVALADDGTVWAWGSNTYGECGEGSSDDILL-------KPVMINGLEG 81

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            ++V  G   +  L S G ++TWG N  G LGIG+ D    PE VQ P          T+
Sbjct: 82  VKDVAVGNNFSMALKSDGTVWTWGDNRYGQLGIGTADDGRHPEPVQVPG--------LTN 133

Query: 350 IVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           ++ +S  ++   A+ +   + W W          G +S GQLG G  +D   P
Sbjct: 134 VIAISADFQLAMALKDDGTV-WAW----------GSNSYGQLGDGKPIDIPPP 175


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 179/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3970 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4027

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4028 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4085

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G      A G   S  +T  G++ +WG G  GRLGHG    
Sbjct: 4086 HGNRSP--CDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGD--- 4140

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4141 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194

Query: 275  GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4254

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4255 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4294

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4295 GDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 142/303 (46%), Gaps = 39/303 (12%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+ T  +++ G  D G+LG  + +    EP  +S L      K+V+ I+ G  +
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHGDTVSLE-EPKLVSALSGKQTGKQVIHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT DGELY WG+ + G+LG G    + +P+   V  L G+     + G    Q+++V
Sbjct: 563 SAAITADGELYTWGRGNYGRLGHGSSEDQTVPM--LVTGLKGLKVVDVSCGSGDAQTLSV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           I ++G+VY +G     ++      H R P +++ L   +  +V  G  H   LT  GE+Y
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVY 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
           +WGSN+  C    ++       R+  P             VL     KH   IS G   +
Sbjct: 732 SWGSNDQ-CQHFDTL-------RIAKPVPS----------VLPGLDSKHIVGISCGPAQS 773

Query: 371 WGW 373
           + W
Sbjct: 774 FAW 776



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 42/323 (13%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C A     +  +AC     L L+  G +Y    N+            +L P  + GL
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN-----------NTLGPQLVQGL 490

Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             + +V+I+      H  A++   EL+ WG    G+LG G   +  +  P  V  LSG  
Sbjct: 491 ASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVS--LEEPKLVSALSGKQ 548

Query: 179 T-KQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           T KQ    A G   S A+T  G++ +WG G  GRLGHG          S  +  P L+  
Sbjct: 549 TGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTVPMLVTG 599

Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL   + 
Sbjct: 600 LKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 659

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   +  +T  G++Y+WG  +N  LG G+ + +  P+ + G   +  VD      
Sbjct: 660 VKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVD------ 713

Query: 351 VLVSCGWKHTAAISE-GKILTWG 372
             V+ G  H  A++E G++ +WG
Sbjct: 714 --VAVGSTHCLALTESGEVYSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 19/228 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
           WG GD GRLG G   S   P + SA   K + K    +ACG  ++  +T  G +Y  G  
Sbjct: 519 WGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRG 578

Query: 99  DFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
           ++G+LG   +   ++ P+ ++GLK  +VV +S  +G   + ++T +G+++ WG    G+L
Sbjct: 579 NYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKL 637

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E 
Sbjct: 638 GRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEE 695

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+++  L+G KV   A G  H   + E+G VY +G
Sbjct: 696 HV---------RYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWG 734



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 162/359 (45%), Gaps = 39/359 (10%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE----G 366
            TW   ++ CL +      +    ++    +  V  +     L +C       I +     
Sbjct: 3232 TWXXTKH-CLAVX---FYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISK 3287

Query: 367  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            K+  WG         ++ H   GQ G+G       PT+V+  E  K  +V+CG +H+ A
Sbjct: 3288 KVYAWG---------DNDH---GQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 128/298 (42%), Gaps = 37/298 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHATAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3178

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             +WG     G F        G+LG G       P  +         Q+ CG   + AL
Sbjct: 3179 FSWG----DGDF--------GKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLAL 3224



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 143/336 (42%), Gaps = 39/336 (11%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGN 276
                 S     P+ I+ L G  V     G   S  + ++G V+ +   +    + F   N
Sbjct: 3194 -----SEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXN 3248

Query: 277  HARRPSLISKLPYSEEVVCGGY-HTCV---------LTSGGELYTWGSNENGCLGIGSID 326
            +     LI        V+ G Y  TC          +    ++Y WG N++G  G G+  
Sbjct: 3249 YLLELFLIKV--SVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTT 3306

Query: 327  VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
            V   P  V G   +         I  V+CG  H+ A
Sbjct: 3307 VNRKPTLVHGLEGQ--------KITRVACGSSHSVA 3334



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 128/289 (44%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +PT  E L+ +   Q   G +   AVT  GK+ + 
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4022

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+          TP L++ ++ V +K  A  +G  H   +   G V
Sbjct: 4023 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+     +   RP +I  L  +E  ++  GG H+  +T+ GELYTWG    
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRY 4133

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P+ V+       +D  C S      G   T  +++   + W WG   
Sbjct: 4134 GRLGHGDSEDQLKPKLVEALQGYRVIDIACGS------GDAQTLCLTDDDTV-WSWG--- 4183

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  ++    V   +V CG   + AL
Sbjct: 4184 -----DGDY--GKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVAL 4225



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
              ++   IP  +E L+G    Q   G + S+A+T  G V +W
Sbjct: 3193 -GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++   ++ SWG G  GRLGHG   S+           P+L+  L G +    V   A 
Sbjct: 508 LALSATSELFSWGCGDGGRLGHGDTVSL---------EEPKLVSALSGKQTGKQVIHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P L++ L      +V CG     T 
Sbjct: 559 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              IV V CG +
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDIVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + AI+ +G++ +WG G +             +LGHG +    +P I+N  +  K + V+
Sbjct: 668 FSIAITKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKIMNGLQGKKVVDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 VGSTHCLALTE 726



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ +T+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQR 688

Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           LG    E++ Y   P  ++GL+ K+VV ++ G  H  A+T  GE+Y WG N   Q    L
Sbjct: 689 LGHGTEEHVRY---PKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTL 745

Query: 156 GLGKKAAKVIP 166
            + K    V+P
Sbjct: 746 RIAKPVPSVLP 756



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A          
Sbjct: 3963 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA------- 4015

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4016 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++            T +V ++ G  H+A I+  G++
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVIESLRG--------TEVVDIAAGGAHSACITAAGEL 4125

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V   +  + + ++CG
Sbjct: 4126 YTWGKG------------RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4164



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P + +  +   +  +A G  H L LTE+G VY+ G ND   
Sbjct: 681 WGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ 740

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++ +     P  + GL  K +V IS G   S A
Sbjct: 741 HFDTLRIAKPV-----PSVLPGLDSKHIVGISCGPAQSFA 775


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3902 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3959

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3960 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4017

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4018 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4072

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4073 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4186

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4187 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4226

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4227 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2965 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3024 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3075 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3134

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3135 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3179

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3180 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3218



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3002

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3060

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3061 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3111

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3112 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3171

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3172 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3223

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3224 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3015 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3075 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3132

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3133 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3189

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3190 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3238

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3239 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3270



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 678 SWGSNDQ 684



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2961 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3020

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3021 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3079

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3080 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3133

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3134 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3188

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3189 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3248

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3249 GLEGQ--------KITRVACGSSHSVA 3267



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 436

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 492

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 659

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 660 -------VAAGSTHCLALTEDSEVHSWG 680



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2897 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3006

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3007 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3066

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3067 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3118

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3119 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3160

Query: 423  TGAL 426
            + AL
Sbjct: 3161 SLAL 3164



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3956 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4015

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4016 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4067 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4127 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4172

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4173 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4205



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 454 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 504

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 565 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 613

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 614 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 661

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 662 AGSTHCLALTE 672



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 634

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 691

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
           +  K  P PT    L G+ TK     A G  QS A
Sbjct: 692 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 721



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3895 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3945

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3946 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4005

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4006 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4057

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4058 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4096


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 4025 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4082

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4083 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4140

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4195

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4196 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4309

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4310 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4349

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4350 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4383



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 3028 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3087

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3088 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3146

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3147 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3198 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3257

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3258 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3302

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3303 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3341



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3066 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3125

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3126 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3183

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3184 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3234

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3235 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3294

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3295 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3346

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3347 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3390



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3138 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3198 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3255

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3256 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3312

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3313 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3361

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3362 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3393



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 29/294 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 573 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 631

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 632 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 689

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 690 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 740

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 741 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 800

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           +WGSN+  C    ++ V   PE    P  +S        IV ++CG   + A S
Sbjct: 801 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS------KHIVGIACGPAQSFAWS 846



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3084 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3143

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3144 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3202

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3203 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3256

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3257 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3311

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3312 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3371

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3372 GLEGQ--------KITRVACGSSHSVA 3390



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 559

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 615

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 616 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 663

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 723

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 724 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 782

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 783 -------VAAGSTHCLALTEDSEVHSWG 803



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 588 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 646

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 647 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 705

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 706 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 763

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 764 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 3020 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3077

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3129

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3130 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3189

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3190 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3241

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3242 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3283

Query: 423  TGAL 426
            + AL
Sbjct: 3284 SLAL 3287



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 4020 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4078

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4079 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4138

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4139 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4189

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4190 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4250 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4295

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4296 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4328



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 644 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 703

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 704 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 762

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 763 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 577 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 627

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 628 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 687

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 688 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 736

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 737 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 784

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 785 AGSTHCLALTE 795



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 698 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 757

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 758 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 814

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 815 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 844



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 34/188 (18%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 517 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 572

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
               G+H   L + GE+Y+WG  + G LG G    L  P +V   FS     Q    +V 
Sbjct: 573 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP-KVISAFSGK---QAGKHVVH 624

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           ++CG  ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +
Sbjct: 625 IACGSTYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGL 672

Query: 412 KALQVSCG 419
           K + V+CG
Sbjct: 673 KVIDVACG 680



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 4018 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4068

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4069 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4128

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4129 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4180

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4181 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4219


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 141/292 (48%), Gaps = 20/292 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +YG+LG G+      P +       +++A+A G +H L L   G V+A G N+ GQ
Sbjct: 114 WGWNEYGQLGDGTTMDHNTPGMVGGL--GNVRAVAVGISHMLALGNDGTVWAWGKNNCGQ 171

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N+  S+ P+R+SGL + +V IS GY+H+ AI   G ++ WG N  GQLG G   +
Sbjct: 172 LGDGTNVD-SMTPVRVSGLPR-IVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNIS 229

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P P KV+ L+ +     A G   S+A+   G + +WG+   G LG G          
Sbjct: 230 S--PNPKKVKGLANV--TAVAGGSSFSLALKDDGTIWAWGSNVQGELGVG---------- 275

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T++  P  +K      V   AAG   SA I  +G ++++G     K +   G  A  P 
Sbjct: 276 -TTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNEQGKYI-SGGEDASSPR 333

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             S L   + V  G  +   L + G L+  G N+ G LG G+    + P RV
Sbjct: 334 RASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARV 385



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 155/373 (41%), Gaps = 42/373 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G LG  S++ ++ P     +   S+ +     A    L + G V+  G N++GQ
Sbjct: 65  WGHSWHGGLGYESVQDQYVPKRVPIYNVTSVDSCF---ASVAALKDDGTVWTWGWNEYGQ 121

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + ++  P  + GL   V  ++ G  H  A+  DG ++ WGKN+ GQLG G    
Sbjct: 122 LGDGTTMDHN-TPGMVGGLGN-VRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVD 179

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+  +V  L  I    A  G+  ++A+   G V +WG    G+LG G          
Sbjct: 180 SMTPV--RVSGLPRIVAISA--GYNHNLAIDDAGNVWTWGLNDCGQLGDGT--------- 226

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + S   P+ +K L    V   A G   S  + ++G ++ +G     ++          P 
Sbjct: 227 NISSPNPKKVKGL--ANVTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPV 284

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  GG  +  +T+ G L+ WG NE G    G  D   SP R  G      
Sbjct: 285 KVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNEQGKYISGGEDA-SSPRRASG------ 337

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                +++ LV  G  +  A+            + G+    G +  GQLG GN  D   P
Sbjct: 338 ----LSNVKLVDIGTINIIALE-----------NDGSLWVVGDNQFGQLGTGNTYDRNMP 382

Query: 403 TIVNFGENVKALQ 415
             V  G NV   Q
Sbjct: 383 ARVAIGSNVGFAQ 395



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 22/228 (9%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPT 169
           ++  +R +  +  VV ++ G+  S A+  +G ++ WG + +G LG      + +P  +P 
Sbjct: 30  AMAGVRCAASQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRVPI 89

Query: 170 -KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             V  +   F   AAL  +        G V +WG    G+LG G          +    T
Sbjct: 90  YNVTSVDSCFASVAALKDD--------GTVWTWGWNEYGQLGDGT---------TMDHNT 132

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P ++  L    V+  A G  H   +  +G V+ +G     ++       +  P  +S LP
Sbjct: 133 PGMVGGLG--NVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP 190

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               +  G  H   +   G ++TWG N+ G LG G+     +P++V+G
Sbjct: 191 RIVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKG 238


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3653 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3710

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3711 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3768

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3769 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3823

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3824 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3937

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 3938 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 3977

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 3978 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4011



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2657 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2716

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2717 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2775

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2776 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2827 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2886

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2887 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2931

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2932 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2970



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2695 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2754

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2755 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2812

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2813 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2863

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2864 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2923

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2924 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 2975

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2976 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3019



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2767 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2827 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2884

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2885 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2941

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2942 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2990

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2991 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3022



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2713 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2773 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2831

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2832 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2885

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2886 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2940

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2941 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3000

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3001 GLEGQ--------KITRVACGSSHSVA 3019



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2649 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2706

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2758

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2759 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2818

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 2819 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 2870

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 2871 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 2912

Query: 423  TGAL 426
            + AL
Sbjct: 2913 SLAL 2916



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3648 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3706

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3707 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3766

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3767 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3817

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3818 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 3878 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 3923

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3924 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3956



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 84/197 (42%), Gaps = 39/197 (19%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 445

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 446 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 501

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 502 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 549

Query: 230 RLIKELEGVKVKIAAAG 246
            L+  L+G+KV   A G
Sbjct: 550 MLVAGLKGLKVIDVACG 566



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 134/333 (40%), Gaps = 49/333 (14%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 517

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G       +G
Sbjct: 518 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACG-------SG 568

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             + L+     + RL      S+LG L  +         +L GV  +    G+       
Sbjct: 569 DAQTLAVTENETTRLSVLWR-SVLGILCVSGVVESFRYNQL-GVGCRCRQRGWEPP---- 622

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEE-----VVCGG--------- 297
           +    + +G    D ML +EG     A RP  +     S++     +VCGG         
Sbjct: 623 QEDLKFFYGVLTRDVML-REGQIVFEAGRPGCVPTPVSSQKQALGYIVCGGCSSLGPGKK 681

Query: 298 --------YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
                    H   LT   E+++WGSN+  C    ++ V   PE    P  ++      T 
Sbjct: 682 VIDVAAGSTHCLALTEDSEVHSWGSNDQ-CQHFDTLRVT-KPEPAALPGLDAKHIMGITC 739

Query: 350 IVLVSCGWKHTAAISEGKILTWGWGGSHGTFSE 382
               SC W   +  S G  + +G      TF +
Sbjct: 740 GPAQSCAWSSCSEWSIGLRVPFGADICSMTFEQ 772



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 17/124 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           G+H   L + GE+Y+WG  + G LG G    L  P +V   FS     Q    +V ++CG
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP-KVISAFSGK---QAGKHVVHIACG 514

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 515 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 562

Query: 416 VSCG 419
           V+CG
Sbjct: 563 VACG 566



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3646 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3696

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3697 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3756

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3757 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 3808

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 3809 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 3847



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 474 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 532

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
            ++G+LG   +   ++ P+ ++GLK  +V+ ++ G   +  + V
Sbjct: 533 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 575


>gi|303282751|ref|XP_003060667.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458138|gb|EEH55436.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 233

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 114/224 (50%), Gaps = 22/224 (9%)

Query: 225 SEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR-- 279
           +E TPRL++ L    V+  +  AG  HSAC+DE+G +Y++G    +++ L  + NH R  
Sbjct: 8   AETTPRLVRSLADDNVRAVSVHAGDAHSACVDEDGTLYVWGSNRYNQLGLGGKENHPRGG 67

Query: 280 -----RPSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 P+ + +LP      CGG +       G  L +WG+N +G LG G  D  +    
Sbjct: 68  DAFVTTPTTVPRLPRVGSFACGGSFSVAANRHGAGLKSWGANGSGELGEGH-DAGNESRA 126

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
                  S V +     V VS GW+H AAI ++G + TWGWGGS G   +D  S+GGQL 
Sbjct: 127 APRAVDTSSV-KGSADFVRVSAGWRHAAAIATDGGVYTWGWGGSAGQHHDDAFSTGGQLC 185

Query: 393 HGNDVDYIHP-TIVNFGEN-------VKALQVSCGFNHTGALLE 428
            G D D+  P  + +F          + A  VSCGFNHT  L++
Sbjct: 186 LGVDNDFWEPFPVPDFTRRGDGGRRLLAAKDVSCGFNHTVVLVD 229



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 91/217 (41%), Gaps = 42/217 (19%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK------AAKVIPIPTKVECLSGI 177
             V +  G  HS+ +  DG LY+WG N   QLGLG K          +  PT V  L  +
Sbjct: 24  RAVSVHAGDAHSACVDEDGTLYVWGSNRYNQLGLGGKENHPRGGDAFVTTPTTVPRLPRV 83

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
            +      F  +    G G + SWGA GSG LG G ++       + S   PR + +   
Sbjct: 84  GSFACGGSFSVAANRHGAG-LKSWGANGSGELGEGHDAG------NESRAAPRAV-DTSS 135

Query: 238 VK-----VKIAAAGFLHSACIDENGRVYIFG---------DRA----------VDKML-- 271
           VK     V++ +AG+ H+A I  +G VY +G         D A          VD     
Sbjct: 136 VKGSADFVRV-SAGWRHAAAIATDGGVYTWGWGGSAGQHHDDAFSTGGQLCLGVDNDFWE 194

Query: 272 -FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
            F   +  RR     +L  +++V CG  HT VL   G
Sbjct: 195 PFPVPDFTRRGDGGRRLLAAKDVSCGFNHTVVLVDDG 231



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 35/188 (18%)

Query: 42  LWGNGDYGRLGLGSLESRWR--------PVVCSAFEKHSLKALACGGAHTLFLTETGC-V 92
           +WG+  Y +LGLG  E+  R        P       +  + + ACGG+ ++     G  +
Sbjct: 46  VWGSNRYNQLGLGGKENHPRGGDAFVTTPTTVPRLPR--VGSFACGGSFSVAANRHGAGL 103

Query: 93  YATGLNDFGQLGISENIG----YSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYM 146
            + G N  G+LG   + G     +   +  S +K   + V++S G+ H++AI  DG +Y 
Sbjct: 104 KSWGANGSGELGEGHDAGNESRAAPRAVDTSSVKGSADFVRVSAGWRHAAAIATDGGVYT 163

Query: 147 WG-KNSNGQ-------------LGLGKKAAKVIPIPTKVECLSG----IFTKQAALGFEQ 188
           WG   S GQ             LG+     +  P+P       G    +  K  + GF  
Sbjct: 164 WGWGGSAGQHHDDAFSTGGQLCLGVDNDFWEPFPVPDFTRRGDGGRRLLAAKDVSCGFNH 223

Query: 189 SVAVTGGG 196
           +V +   G
Sbjct: 224 TVVLVDDG 231



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 17/182 (9%)

Query: 55  SLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGI--SEN-- 108
           S E+   P +  +    +++A++   G AH+  + E G +Y  G N + QLG+   EN  
Sbjct: 5   SDEAETTPRLVRSLADDNVRAVSVHAGDAHSACVDEDGTLYVWGSNRYNQLGLGGKENHP 64

Query: 109 ---IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA--- 161
                +   P  +  L + V   + G   S A    G  L  WG N +G+LG G  A   
Sbjct: 65  RGGDAFVTTPTTVPRLPR-VGSFACGGSFSVAANRHGAGLKSWGANGSGELGEGHDAGNE 123

Query: 162 AKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           ++  P       + G   F + +A G+  + A+   G V +WG GGS    H    S  G
Sbjct: 124 SRAAPRAVDTSSVKGSADFVRVSA-GWRHAAAIATDGGVYTWGWGGSAGQHHDDAFSTGG 182

Query: 220 FL 221
            L
Sbjct: 183 QL 184


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 170/377 (45%), Gaps = 88/377 (23%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P + +  +   +K +A G  HTL LTE   V++ G+    QLG+       L P+ I  L
Sbjct: 142 PSLVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPL-PVEIESL 200

Query: 122 KK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC---LSG 176
            K   ++++  G+ HS  +T DG+++ WG   + Q G G  + + I IP  ++       
Sbjct: 201 SKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGF-SEEPIHIPKMIKTNYKFKN 259

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
           IFT     G + ++A+T  G+V SWG+G  G+LGHG   ++           P+LI+ ++
Sbjct: 260 IFT-----GSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNV---------EAPKLIQSIQ 305

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
            +         +H+  I+ N R+Y +      KM                      V CG
Sbjct: 306 PL---------VHTNLINTN-RIYEY------KM----------------------VACG 327

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQICTSIVLVSC 355
             H  ++ + G+L T G N NG LG G     H  P +++  F    V       V VS 
Sbjct: 328 FSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKV-------VKVSA 380

Query: 356 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP-TIVNFGE--- 409
           G  H+A I+E GK+  WG G              G+LG+G  V D + P  +++  E   
Sbjct: 381 GRNHSACITESGKLYIWGNGNK------------GKLGNGKSVGDQLTPLELIDIDENNT 428

Query: 410 ---NVKALQVSCGFNHT 423
              N K L +SCGF+HT
Sbjct: 429 DPSNQKVLNISCGFDHT 445



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 27/237 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +G G   +LG+GS E++  PV   +  K  ++  L CG  H+L LT  G ++  G     
Sbjct: 175 FGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDS 234

Query: 102 QLGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           Q G     G+S EP+ I  + K   +   I TG   + AIT DG +  WG    GQLG G
Sbjct: 235 QTG----HGFSEEPIHIPKMIKTNYKFKNIFTGSDFNLAITNDGRVCSWGSGEFGQLGHG 290

Query: 159 K----KAAKVIP-----IPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                +A K+I      + T +   + I+  K  A GF  ++ +   GK+L+ G  G+G+
Sbjct: 291 DTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQ 350

Query: 209 LGHGQESSILGFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
           LG G        ++  +   P +L  + +G KV   +AG  HSACI E+G++YI+G+
Sbjct: 351 LGSG--------VKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIWGN 399



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 36/318 (11%)

Query: 124 EVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQ 181
           E   I  G++H+  ++ +  +LY  G  S   +    K      I P+ V  L     KQ
Sbjct: 96  ECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQ 155

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
            A G   ++ +T   +V S+G G   +LG G          + ++  P  I+ L  +  +
Sbjct: 156 VAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGS---------TENQPLPVEIESLSKLGNI 206

Query: 241 KIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
                G+ HS  +  +G ++ +G   D        +E  H   P +I      + +  G 
Sbjct: 207 IKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHI--PKMIKTNYKFKNIFTGS 264

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV----LV 353
                +T+ G + +WGS E G LG G    + +P+ +Q        + I T+ +    +V
Sbjct: 265 DFNLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMV 324

Query: 354 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD-YIHPTIVNFG-EN 410
           +CG+ H   I ++GK+LT GW G+            GQLG G   D ++ PT + F  + 
Sbjct: 325 ACGFSHALIIDNDGKLLTLGWNGN------------GQLGSGVKGDNHLVPTKLEFDFDG 372

Query: 411 VKALQVSCGFNHTGALLE 428
            K ++VS G NH+  + E
Sbjct: 373 EKVVKVSAGRNHSACITE 390



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 14/131 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK------------HSLKALACGGAHTLFLTETG 90
           WG+G++G+LG G  ++   P +  + +             +  K +ACG +H L +   G
Sbjct: 279 WGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDG 338

Query: 91  CVYATGLNDFGQLGISENIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +   G N  GQLG        L P  L      ++VV++S G +HS+ IT  G+LY+WG
Sbjct: 339 KLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIWG 398

Query: 149 KNSNGQLGLGK 159
             + G+LG GK
Sbjct: 399 NGNKGKLGNGK 409


>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
          Length = 322

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTC 301
           L+ ++     ++ CG    C
Sbjct: 281 LVERIDGLVSQIDCGRLRGC 300



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 38/303 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           +  L+  G  + WGSN  G L +   +V   P +   P S   +  +   +V +SCG  H
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNL--GVVYISCGDAH 247

Query: 360 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QV 416
           TA ++ +GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+
Sbjct: 248 TAVLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQI 292

Query: 417 SCG 419
            CG
Sbjct: 293 DCG 295



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEF--------PSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L     V   CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSE 340
           +T+G N +G LG         P   ER+ G  S+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ 291



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           +       G         P+L++ ++G+  +I
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQI 292



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 35/255 (13%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG  +  +  G L       P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGEL-------PEPIQALETLIV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGG 297
            + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V CG 
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ Q       V+ G
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ-------VAAG 189

Query: 357 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKA 413
             H+ A+S     ++GWG           +S GQL   G    V    P  V   +N+  
Sbjct: 190 GAHSFALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSVGALKNLGV 238

Query: 414 LQVSCGFNHTGALLE 428
           + +SCG  HT  L +
Sbjct: 239 VYISCGDAHTAVLTQ 253



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 25/208 (12%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           + E   R      G ++  AA+G  HS  +  N RV   GD +  ++  +       P  
Sbjct: 9   SRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP 68

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSE 340
           I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++      
Sbjct: 69  IQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM----- 123

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-D 398
             ++ I   I+ VSCG  H+ A+S + ++ +W            G +S GQLG G +   
Sbjct: 124 -TLNDI--KIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPS 168

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGAL 426
              P  V   E +   QV+ G  H+ AL
Sbjct: 169 QASPQRVRSLEGIPLAQVAAGGAHSFAL 196


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4244 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4283

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4284 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 29/294 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           +WGSN+  C    ++ V   PE    P  +S        IV ++CG   + A S
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS------KHIVGIACGPAQSFAWS 778



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4184 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4229

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4230 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 34/188 (18%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
               G+H   L + GE+Y+WG  + G LG G    L  P +V   FS     Q    +V 
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP-KVISAFSGK---QAGKHVVH 556

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           ++CG  ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGL 604

Query: 412 KALQVSCG 419
           K + V+CG
Sbjct: 605 KVIDVACG 612



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4002

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4003 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4114

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4115 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4244 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4283

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4284 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 141/294 (47%), Gaps = 29/294 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H  VLT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           +WGSN+  C    ++ V   PE    P  +S        IV ++CG   + A S
Sbjct: 733 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS------KHIVGIACGPAQSFAWS 778



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  ++ L     +  A G   S  +T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 146/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+ +T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +A G +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 147/328 (44%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H   ++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLVLTEDSEVHSWG 735



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 131/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++  G  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4184 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4229

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4230 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    + +T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H   L E
Sbjct: 717 AGSTHCLVLTE 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H   +T D E++ WG N   Q    L
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 746

Query: 156 GLGKKAAKVIP 166
           G+ K      P
Sbjct: 747 GVTKPEPTAFP 757



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 34/188 (18%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
               G+H   L + GE+Y+WG  + G LG G    L  P +V   FS     Q    +V 
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP-KVISAFSGK---QAGKHVVH 556

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           ++CG  ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGL 604

Query: 412 KALQVSCG 419
           K + V+CG
Sbjct: 605 KVIDVACG 612



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4002

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4003 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4114

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4115 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 158/341 (46%), Gaps = 44/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      RP +      +++  +ACG  HT  ++ +G ++    G ++ 
Sbjct: 291 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 350

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R+SG  +  +V+ ++ G  HS+  T +G+L+ +G  + G LG G
Sbjct: 351 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 409

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
            + +  +P P +V+ LSG+ T + A G   + A+              K+ +WG G   R
Sbjct: 410 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 467

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG + + L          P  +  L        A G   +  +  +G V+  G  A  
Sbjct: 468 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 518

Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN     R P L+  KL   + EE+ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 519 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 574

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G  +   SP      F E+  D+   SI   SCG   TA+I
Sbjct: 575 GDTEDRRSPT-----FVEALKDRNVKSI---SCGSNFTASI 607



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 160/371 (43%), Gaps = 55/371 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +ACG  H   +T  G V+  G    G+LG   +  +S   L        V  ++ G +H+
Sbjct: 272 IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHT 331

Query: 136 SAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
            A++  G+L+ WG  ++  G LG G + +  IP   +V   L G+     A G   S   
Sbjct: 332 CAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIP--KRVSGPLEGLQVLSVACGTWHSALA 389

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  GK+ ++G G  G LGHG   S+           PR ++ L G+K    A G  H+A 
Sbjct: 390 TSNGKLFTFGDGTFGVLGHGDRESV---------PYPREVQILSGLKTIKVACGVWHTAA 440

Query: 253 IDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHT 300
           I E          + +++ +GD    ++          P+ +S L  Y+  ++ CG   T
Sbjct: 441 IIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMT 500

Query: 301 CVLTSGGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             LT+ G ++T G    G LG     G +  L   +++ G F E            +SCG
Sbjct: 501 VALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQ-DKLVGEFVEE-----------ISCG 548

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   PT V   ++     
Sbjct: 549 AYHVAVLTSRSEVFTWGRGAN------------GRLGHGDTEDRRSPTFVEALKDRNVKS 596

Query: 416 VSCGFNHTGAL 426
           +SCG N T ++
Sbjct: 597 ISCGSNFTASI 607



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 135/312 (43%), Gaps = 62/312 (19%)

Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPIPTKVECLSG--------IFTKQAALGFEQSVAV 192
           G++Y+WG+   +G L  G     V P P K++ L+         +   Q A G      V
Sbjct: 227 GDVYVWGEVWCDGVLPDGS----VSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V +WG    GRLGHG ++    F R      P L++ L    V   A G  H+  
Sbjct: 283 TRQGEVFTWGEESGGRLGHGIDND---FSR------PHLVEFLAVNNVDFVACGEYHTCA 333

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGG 307
           +  +G ++ +GD   +  L   G       P  +S      +V+   CG +H+ + TS G
Sbjct: 334 VSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNG 393

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI--VLVSCGWKHTAA--- 362
           +L+T+G    G LG G  + +  P  V          QI + +  + V+CG  HTAA   
Sbjct: 394 KLFTFGDGTFGVLGHGDRESVPYPREV----------QILSGLKTIKVACGVWHTAAIIE 443

Query: 363 --------ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
                   IS  K+ TWG G  H            +LGHG+   Y+ PT V+   +    
Sbjct: 444 VMSQSGTNISSRKLFTWGDGDKH------------RLGHGSKETYLLPTCVSALIDYNFH 491

Query: 415 QVSCGFNHTGAL 426
           Q++CG   T AL
Sbjct: 492 QLACGHTMTVAL 503



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 26/209 (12%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V   A G  H A +   G V+ +G+ +  ++     N   RP L+  L
Sbjct: 257 TPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFL 316

Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESP 342
             +  + V CG YHTC +++ G+L+TWG  ++  G LG G+ +V H  P+RV GP     
Sbjct: 317 AVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGT-EVSHWIPKRVSGPLE--- 372

Query: 343 VDQICTSIVLVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                  ++ V+CG  H+A A S GK+ T+G     GTF        G LGHG+     +
Sbjct: 373 ----GLQVLSVACGTWHSALATSNGKLFTFG----DGTF--------GVLGHGDRESVPY 416

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLEYV 430
           P  V     +K ++V+CG  HT A++E +
Sbjct: 417 PREVQILSGLKTIKVACGVWHTAAIIEVM 445



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG GS E+   P   SA   ++   LACG   T+ LT +G V+  G   +GQ
Sbjct: 460 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 519

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   + G  L  L    L  E V +IS G +H + +T   E++ WG+ +NG+LG G   
Sbjct: 520 LGNPLSDGR-LPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 578

Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
            +    PT VE L     K  + G  F  S+ +
Sbjct: 579 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 609


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 145/307 (47%), Gaps = 37/307 (12%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
           G G YGRLG G+  S   P++   F     K L   G+  H++ + + G ++  G  D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYG 244

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG  ++       L  +   + +V    G+ HS+A+   G LYMWG+   G+LGLG   
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304

Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
            + +P+  P   E        Q   GF  +V ++  G+ V S+GA  +G+LGHG      
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI------FGDRAVDKMLF 272
               +  ++ P++I  L+G+ +   AAG   SA +   G +Y+       G+ + D+   
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLH 329
                   P ++  L      ++  G  H   LT  G ++TWG+N+NG  G GS +    
Sbjct: 410 -------LPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYT 462

Query: 330 SPERVQG 336
           SP+ VQG
Sbjct: 463 SPQMVQG 469



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 44/342 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  G N   QL  +      L P  +S   K V+ I+ G + + A+  +G +   GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSITAGQYCTFAVLSNGTVMANGKGS 189

Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            G+LG G  A+   PI  +    +  I T + + G   S+A+   G++ +WG G  G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSMAIGKNGQIWTWGDGDYGKLG 247

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG          ST++ +P+LI+ L    +  A  G  HSA + + G +Y++G+    ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSIDVLH 329
              +      P  +  +  + +VVCG  HT VL++ G  ++++G+ ENG LG G  +   
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQF 358

Query: 330 SP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 385
            P   + +QG            +I  ++ G + +AA++ EG +  WG+G           
Sbjct: 359 RPKIIDALQG-----------LTITQIAAGTQISAAVTREGALYVWGFGPC--------- 398

Query: 386 SSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                LG+G +D  ++ P +V        + ++ G NH  AL
Sbjct: 399 -----LGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVAL 435



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 15/223 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G   ++  P +  A     +    CG  H+  + + G +Y  G  D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
           LG+ + +  S+ P+++  + +E  Q+  G++H+  ++ DG  ++ +G   NG+LG G   
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  ++ L G+   Q A G + S AVT  G +  WG G     G   E+ +L   
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
                  P++++ L G  V   A G  H   + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGN 446



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
           +WG GDYGRLGLG    R  PV      + S   + CG  HT+ L+  G  V++ G  + 
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG  +       P  I  L+   + QI+ G   S+A+T +G LY+WG      LG G 
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + +   +P  V  LSG      A+G    VA+T  G V +WG   +G+ G G      G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
               TS   P++++ L G  ++   AG  H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 122/288 (42%), Gaps = 37/288 (12%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           E++ WG NS+ QL       K++  P  +     + +  A  G   + AV   G V++ G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLL-YPRNLSVYGKVMSITA--GQYCTFAVLSNGTVMANG 186

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL-HSACIDENGRVYI 261
            G  GRLG+G          S S  +P LI+    V+  + + G   HS  I +NG+++ 
Sbjct: 187 KGSYGRLGNGA---------SASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWT 237

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
           +GD    K+   +    + P LI  L  S  +V   CG  H+  +   G LY WG  + G
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALA-SRVIVDADCGHRHSAAVCDAGHLYMWGEGDYG 296

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHG 378
            LG+G  D L     VQ P               V CG+ HT  +S      W +G +  
Sbjct: 297 RLGLG--DALQRSVPVQVPDIREASQ--------VVCGFNHTVVLSTDGRTVWSFGAAE- 345

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                     G+LGHG+      P I++  + +   Q++ G   + A+
Sbjct: 346 ---------NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAV 384


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3869 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3926

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3927 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3984

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3985 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4039

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4040 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4153

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4154 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4193

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4194 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4227



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2872 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2931

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2932 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2990

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2991 GH--------FSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3042 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3101

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3102 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3146

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3147 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3185



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 141/294 (47%), Gaps = 29/294 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 415 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 473

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 531

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 532 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 582

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H  VLT   E++
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 642

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           +WGSN+  C    ++ V   PE    P  +S        IV ++CG   + A S
Sbjct: 643 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS------KHIVGIACGPAQSFAWS 688



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2910 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 2969

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  ++ L     +  A G   S  +T 
Sbjct: 2970 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3027

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3028 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3078

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3079 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3138

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3139 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3190

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3191 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 146/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2928 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2987

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+ +T  GELY WG    G+LG G 
Sbjct: 2988 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3046

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3047 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3100

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3101 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3155

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3156 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3215

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3216 GLEGQ--------KITRVACGSSHSVA 3234



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +A G +H+  LT +G +Y  GL ++G+
Sbjct: 2982 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3042 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3099

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3100 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3156

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3157 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3205

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3206 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3237



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 147/328 (44%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 401

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 457

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 505

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 566 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 624

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H   ++E  ++ +WG
Sbjct: 625 -------VAAGSTHCLVLTEDSEVHSWG 645



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 430 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 488

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 489 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 548 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 605

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 606 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 131/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2864 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2921

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2973

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++  G  H+  LTS GELYT
Sbjct: 2974 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYT 3033

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3034 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3085

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3086 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3127

Query: 423  TGAL 426
            + AL
Sbjct: 3128 SLAL 3131



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3864 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3922

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3923 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3982

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3983 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4033

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4034 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4094 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4139

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4140 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4172



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 486 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 546 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 604

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    + +T   +V SWG+ 
Sbjct: 605 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 419 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 469

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 529

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 530 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 578

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 579 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 626

Query: 418 CGFNHTGALLE 428
            G  H   L E
Sbjct: 627 AGSTHCLVLTE 637



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 599

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H   +T D E++ WG N   Q    L
Sbjct: 600 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 656

Query: 156 GLGKKAAKVIP 166
           G+ K      P
Sbjct: 657 GVTKPEPTAFP 667



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 34/188 (18%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 359 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 414

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
               G+H   L + GE+Y+WG  + G LG G    L  P +V   FS     Q    +V 
Sbjct: 415 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP-KVISAFSGK---QAGKHVVH 466

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           ++CG  ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +
Sbjct: 467 IACGSTYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGL 514

Query: 412 KALQVSCG 419
           K + V+CG
Sbjct: 515 KVIDVACG 522



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3862 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3912

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3913 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3972

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3973 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4024

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4025 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4063


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3964 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4021

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4022 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4079

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4080 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4134

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4135 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4248

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4249 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4288

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4289 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4322



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2967 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3026

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3027 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3085

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3086 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3137 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3196

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3197 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3241

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3242 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3280



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3005 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3064

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3065 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3122

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3123 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3173

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3174 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3233

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3234 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3285

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3286 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3329



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3077 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3137 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3194

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3195 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3251

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3252 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3300

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3301 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3332



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 29/294 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 510 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 568

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 569 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 626

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 627 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 677

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 678 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 737

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           +WGSN+  C    ++ V   PE    P  +S        IV ++CG   + A S
Sbjct: 738 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS------KHIVGIACGPAQSFAWS 783



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3023 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3082

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3083 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3141

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3142 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3195

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3196 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3250

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3251 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3310

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3311 GLEGQ--------KITRVACGSSHSVA 3329



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 496

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 552

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 553 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 600

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 660

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 661 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 719

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 720 -------VAAGSTHCLALTEDSEVHSWG 740



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 525 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 583

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 584 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 642

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 643 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 700

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 701 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2959 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3016

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3068

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3069 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3128

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3129 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3180

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3181 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3222

Query: 423  TGAL 426
            + AL
Sbjct: 3223 SLAL 3226



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3959 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4017

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4018 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4077

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4078 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4128

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4129 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4189 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4234

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4235 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4267



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 581 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 640

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 641 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 699

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 700 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 514 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 564

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 565 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 624

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 625 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 673

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 674 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 721

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 722 AGSTHCLALTE 732



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 635 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 694

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 695 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 751

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 752 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 781



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 34/188 (18%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 454 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 509

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
               G+H   L + GE+Y+WG  + G LG G    L  P +V   FS     Q    +V 
Sbjct: 510 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP-KVISAFSGK---QAGKHVVH 561

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
           ++CG  ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +
Sbjct: 562 IACGSTYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGL 609

Query: 412 KALQVSCG 419
           K + V+CG
Sbjct: 610 KVIDVACG 617



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3957 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4007

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4008 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4067

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4068 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4119

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4120 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4158


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 159/340 (46%), Gaps = 41/340 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA G N+ G
Sbjct: 58  MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117

Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +    S    +     ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL   
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +P    V    G      + G+  S  VT  G++ ++G    G+LG   +  +   
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
               +   P+ +  + G  V++A  G  H+  + E   VY      FG   +   LF+  
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                P  I  +   +   + CG  HT ++T  G +YT+G   +G LG+G        E 
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGL-------EN 333

Query: 334 VQGPFSESPVDQICTSIV-----LVSCGWKHTAAISEGKI 368
               F    +  +C++ +     LVSCG  HT   +  ++
Sbjct: 334 STNQF----IPTLCSNFLRFIVQLVSCGGCHTLVFATPRL 369



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 156/330 (47%), Gaps = 35/330 (10%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          +S G  H++ +T + +LYM+G N+ GQLGLG 
Sbjct: 17  FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K+   +  PT V+ L     K AA G   ++  T GGKV + G    G+LG G       
Sbjct: 72  KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   + R IK+L        +AG   SA + E+G ++++GD +  ++  +   +  
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  ++       + CG YH+  +T+ G+LYT+G  E G LG+ +  +++   R+     
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRM----- 234

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-D 398
             PV  I   +V V+CG  HT  ++E  + T+G G              GQLG G  + +
Sbjct: 235 PQPVPGIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFE 282

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
              P  +   ++ K   ++CG NHT  + +
Sbjct: 283 TSVPKAIEHIKDQKISFIACGENHTALITD 312



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 163/361 (45%), Gaps = 52/361 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  +  LK E V+ +  G +H
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G++Y  G N+ GQLGLG    +          L   FT     KQ + G   S
Sbjct: 99  TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G+         +G    T+   P+ +    G  +   + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQ---------IGLENVTNVCVPQQV--TVGKPISWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +   G++Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
              +YT+G  + G LG+G+     S P+ +     E   DQ    I  ++CG  HTA I+
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAI-----EHIKDQ---KISFIACGENHTALIT 311

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 422
           + G + T+G  G HG            LG  N  +   PT+  NF   +  L VSCG  H
Sbjct: 312 DMGLMYTFG-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCH 360

Query: 423 T 423
           T
Sbjct: 361 T 361


>gi|302847903|ref|XP_002955485.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
           nagariensis]
 gi|300259327|gb|EFJ43556.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
           nagariensis]
          Length = 1660

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 6/180 (3%)

Query: 38  RFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           R  A +G    GRLGLG  L+S++ P + ++   +S+K +ACGGAHT  +T+ G ++  G
Sbjct: 7   RVLATFGTAADGRLGLGFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFG 66

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LN +GQLG S    +   PL + GL   VV ++ G +H+ A+T  GE++ WG    GQLG
Sbjct: 67  LNSWGQLGHSRQDKFVASPLEV-GLPDPVVAVAAGGYHTLALTSAGEVWCWGMAGEGQLG 125

Query: 157 LGKKAAKVI----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           +G+ +          P  V  LSG      A G   S+A+T  G++ SWG G  G LGHG
Sbjct: 126 IGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRGDQGALGHG 185



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 38/214 (17%)

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           ++G    GRLG       LGF    S++ PR++  L G  +K  A G  H+A + ++G +
Sbjct: 11  TFGTAADGRLG-------LGFPLK-SQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGAL 62

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISK-----LPYSE-EVVCGGYHTCVLTSGGELYTWG 313
           + FG  +  ++      H+R+   ++      LP     V  GGYHT  LTS GE++ WG
Sbjct: 63  FTFGLNSWGQL-----GHSRQDKFVASPLEVGLPDPVVAVAAGGYHTLALTSAGEVWCWG 117

Query: 314 SNENGCLGIGSIDV-----LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
               G LGIG              R+ G  S +        +V ++ G  H+ A++  G+
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGA-------GVVSLAAGDHHSLALTRSGE 170

Query: 368 ILTWGWGGS----HGT--FSEDGHSSGGQLGHGN 395
           + +WG G      HGT   +   +SSG     GN
Sbjct: 171 LFSWGRGDQGALGHGTVAITAGPYSSGAVDSRGN 204



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 56/267 (20%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           L  +G  ++G+LGLG         P  V  L+G   KQ A G   +  VT  G + ++G 
Sbjct: 9   LATFGTAADGRLGLGFPLKSQF-YPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFGL 67

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH ++     F+ S  E        L    V +AA G+ H+  +   G V+ +G
Sbjct: 68  NSWGQLGHSRQDK---FVASPLEVG------LPDPVVAVAAGGY-HTLALTSAGEVWCWG 117

Query: 264 DRAVDKMLFQE------GNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
                ++   E      G     P L+  L  +  V    G +H+  LT  GEL++WG  
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG 177

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
           + G LG G++ +        GP+S   VD                   S G    WG+G 
Sbjct: 178 DQGALGHGTVAI------TAGPYSSGAVD-------------------SRGNAYVWGYG- 211

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                      +G QLG G   + + P
Sbjct: 212 -----------TGYQLGTGRATNEMQP 227


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG GS     RP V  +     +  +A GGAH+  +T  G +Y  G   +G+
Sbjct: 4067 WGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4126

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG S++    L+P  +  L+   VV ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4127 LGHSDSED-QLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4184

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4185 -GSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4241

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4242 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4294

Query: 280  RPSLISKL--PYSEEVVCGGYHT 300
            RP L++ L       V CG  HT
Sbjct: 4295 RPRLVAALQGKKVNRVACGSAHT 4317



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 188/404 (46%), Gaps = 43/404 (10%)

Query: 32   SSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTET 89
            SS   R    +WG  D  +LG G   S+ + P         ++  +A GG+ +LF +T  
Sbjct: 2956 SSAAVRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVE 3013

Query: 90   GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
            G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H++A+TVDG+++ 
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            WG+  +G+LG   +       P  +E L     +  A G   S A+T  G++ +WG G  
Sbjct: 3074 WGEGDDGKLGHFSRMN--CDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEY 3131

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
            GRLGHG          +T++  P+++K L G +V   A G     +  + + G V+ +GD
Sbjct: 3132 GRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
                K+          P  I +L      ++ CG   +  LT  G ++TWG  +   LG 
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242

Query: 323  GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            GS   +  P+ V+G   +         IV V+ G  H  A+++ G++  WG         
Sbjct: 3243 GSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVYAWG--------- 3285

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3286 DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   ++K  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4019 GRLGIGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  VE L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4077 HGSRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4132 ------SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4186 SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4246 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4285

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4286 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 160/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2964 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3023

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3024 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3082

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L   +++  A G  HSA +  +G +Y +G     +
Sbjct: 3083 GH--------FSRMNCD-KPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3134 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3193

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3194 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3238

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3277



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A     ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3074 WGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3134 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3191

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3192 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3248

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3249 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3297

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3298 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3329



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ ++V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLEVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 145/325 (44%), Gaps = 46/325 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE++ WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 I----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
                     A G   S A+T  G++ +WG G  GRLGHG          S  E  P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598

Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
             L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
           E  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P  ++G   +  +D    
Sbjct: 659 EVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVID---- 714

Query: 349 SIVLVSCGWKHTAAISE-GKILTWG 372
               V+ G  H  A++E  ++ +WG
Sbjct: 715 ----VAAGSTHCLALTEDSEVHSWG 735



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           PRL++ L G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 136/311 (43%), Gaps = 51/311 (16%)

Query: 129  STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            S G   S+A+    ++++WG N   QLG G K +K I +P+  E LS +   Q A G + 
Sbjct: 2951 SAGLESSAAVRT--KVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKS 3006

Query: 189  SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
              AVT  GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G
Sbjct: 3007 LFAVTVEGKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSG 3058

Query: 247  FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT 304
              H+  +  +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LT
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT 3118

Query: 305  SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---A 361
            S GELYTWG  E G LG G       P+ V+              ++ V+CG +     A
Sbjct: 3119 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLA 3170

Query: 362  AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------Q 415
               EG + +WG     G F        G+LG G           N  +N++ L      Q
Sbjct: 3171 LTDEGLVFSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQ 3212

Query: 416  VSCGFNHTGAL 426
            + CG   + AL
Sbjct: 3213 IECGAQFSLAL 3223



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 133/339 (39%), Gaps = 88/339 (25%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4014

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 4015 YGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+++ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4075 LGHGSRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4126 RLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 325  IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 383
             D    P +++              +V V CG + + A+++ G + TWG G  H      
Sbjct: 4186 SDGCKVPMKIES--------LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------ 4231

Query: 384  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                  +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4232 ------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4264



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQGGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LEVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++      K + V+
Sbjct: 669 FSVALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPRLLEGLHGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3954 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4004

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4005 TADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4064

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG GS      P  V+       VD        V+ G  H+A ++  G +
Sbjct: 4065 YSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVD--------VAAGGAHSACVTAAGDL 4116

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4117 YTWGKG------------RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACG 4155



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +        +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPAALPGLDTKHIVGIACGPAQSFA 776


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 177/394 (44%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3958 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4015

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LG+      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4016 GRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4073

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G      A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4074 HGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4128

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4129 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4182

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4183 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4242

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    SE G++ TW            G +  GQL
Sbjct: 4243 QVQGLQGK--------KVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQL 4282

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4283 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4316



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2960 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3019

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3020 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3078

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3079 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3130 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3189

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3190 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3234

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3235 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3273



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2998 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3057

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3058 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3115

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3116 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3166

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3167 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3226

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3227 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3278

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3279 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3322



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3070 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3130 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3187

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3188 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3244

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3245 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3293

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3294 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3325



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3016 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3076 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3134

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3135 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3188

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3189 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3243

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3244 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3303

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3304 GLEGQ--------KITRVACGSSHSVA 3322



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2952 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3009

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3061

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3062 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3121

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3122 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3173

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3174 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3215

Query: 423  TGAL 426
            + AL
Sbjct: 3216 SLAL 3219



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 133/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3953 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4011

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4012 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4071

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G +V   AAG  HSAC+   G +Y +G     
Sbjct: 4072 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4122

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4123 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4182

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4183 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4228

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4261



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSVALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 3951 GSGTIYGWGHNHRGQLGGIEGAKV---------KVPTPCEALAALRPVQLIGGEQTLFAV 4001

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4002 TADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4061

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++            T +V V+ G  H+A ++  G +
Sbjct: 4062 YSWGEAEDGKLGHGNRSPCDRPRVIESLRG--------TEVVDVAAGGAHSACVTAAGDL 4113

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4114 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4152



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776


>gi|421100544|ref|ZP_15561167.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200901122]
 gi|410796347|gb|EKR98483.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200901122]
          Length = 506

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 137/299 (45%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +    +   + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            + G N+ GQLG   N      +S+ P+ + GLK +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 260 VSFGQNNVGQLGNGANDLNADSFSMNPVAVVGLK-DVIQVIAGSEHSAALTENGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A       P KVE LSGI  KQ A G +  +A+   GK+ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L  +      AG   S  I ++G V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H  VL   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 160/372 (43%), Gaps = 52/372 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L  GGAH+ FL + G VY TG N+FGQLG   + G     + +       +  I    ++
Sbjct: 131 LGAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSISNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
           S AI  +G +Y WG N+ GQLG+G         + A    P PT V  +        A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLVPGIDDAV--MGAYG 246

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
           F  ++ +   G V+S+G    G+LG+G        L + S    P  +  L+ V   I  
Sbjct: 247 FNHALILKSDGTVVSFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLKDVIQVI-- 299

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
           AG  HSA + ENG VY++G      +        N A+  P  +  L   +++  G  H 
Sbjct: 300 AGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW--- 357
             L S G++Y+WG N +G LGIG            G  + +P+     +I+  S  W   
Sbjct: 360 LALASDGKIYSWGLNASGQLGIGG----------NGSPNPTPIPTQVLNILNASSVWAGG 409

Query: 358 -KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQ 415
            +  + +  G++  WG          +G+++   +G  N +    P     G +NV  + 
Sbjct: 410 TQSFSILKSGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IH 458

Query: 416 VSCGFNHTGALL 427
             CG  H   LL
Sbjct: 459 FGCGATHNFVLL 470



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-VIPIPTKVECL 174
           L+KEV      ++  G  HS  +  +GE+Y  G+N+ GQLG G         +  K+  +
Sbjct: 119 LQKEVNFYFGTKLGAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+  +   P L
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
           +  ++     + A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 VPGID--DAVMGAYGFNHALILKSDGTVVSFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +   +    +P +V+G      
Sbjct: 292 LKDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEG------ 345

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                + I  ++ G  H  A+ S+GKI +WG   S
Sbjct: 346 ----LSGIKQIANGRDHILALASDGKIYSWGLNAS 376



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L     ++  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P+    L       +  G   S +I   GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   +  + G G++  WG    G LG 
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488


>gi|262193493|ref|YP_003264702.1| alpha-tubulin suppressor and related RCC1 domain- containing
           protein-like protein [Haliangium ochraceum DSM 14365]
 gi|262076840|gb|ACY12809.1| Alpha-tubulin suppressor and related RCC1 domain- containing
           protein-like protein [Haliangium ochraceum DSM 14365]
          Length = 817

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 168/389 (43%), Gaps = 54/389 (13%)

Query: 43  WGNGDYGRLGLGSLE-----SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATG 96
           WG   YG+LG G+L+     +   P            + L  G  HT  L E+G +Y  G
Sbjct: 443 WGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPARQLVAGYDHTCALLESGLIYCWG 502

Query: 97  LNDFGQLGIS--ENIGYSLEPLRISG---LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            N+FGQLG +  +N+G   EP+  +G   L     +I+ G +H+ AI   G L  WG+N+
Sbjct: 503 KNNFGQLGYNRDDNVGDG-EPVTSAGYVTLGGLATKIAAGGNHTCAILEGGFLRCWGENT 561

Query: 152 NGQLGLGKKAA----KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
            GQLGLG        + +     VE   G+  +  ALGF  + A+  GG +  WG  G G
Sbjct: 562 YGQLGLGHSNPIGDNENVFAAGNVELGDGVVVEDIALGFSHTCALLAGGGMRCWGYNGHG 621

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG+G + +    L        +    + G   KI A G  H+  + +N ++  +GD   
Sbjct: 622 QLGYGHDDN----LGDNESLETQGNVAVPGPVRKIVAGG-QHTCALLQNNKLRCWGDGGD 676

Query: 268 DKMLFQEGN-----HARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELYTWGS 314
            +  + E N     +   P  +      +        +VV GG HTC L S G L  WG+
Sbjct: 677 GRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGADVTDVVAGGAHTCALLSNGALKCWGT 736

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGW 373
             NG LG        +P  +        VD    S   ++ G +HT A+ S G    WG 
Sbjct: 737 GSNGRLGYSDTGNRGTPPALG-------VDLDGVSAYQIAAGEEHTCALRSNGTARCWGR 789

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           G S            G+LG G++ D + P
Sbjct: 790 GLS------------GRLGSGSEADILSP 806



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 159/381 (41%), Gaps = 50/381 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISG----LKKEVV 126
           L+ +  G AHT  LT  G V   G N +GQLG    ++IG +   L  +     L +   
Sbjct: 421 LRRIVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPAR 480

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTK-VECLSGIFTKQAA 183
           Q+  GY H+ A+   G +Y WGKN+ GQLG  +        P+ +     L G+ TK AA
Sbjct: 481 QLVAGYDHTCALLESGLIYCWGKNNFGQLGYNRDDNVGDGEPVTSAGYVTLGGLATKIAA 540

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   + A+  GG +  WG    G+LG G  + I     + + +    ++  +GV V+  
Sbjct: 541 -GGNHTCAILEGGFLRCWGENTYGQLGLGHSNPI---GDNENVFAAGNVELGDGVVVEDI 596

Query: 244 AAGFLHSACIDENGRVYIFG------------DRAVDKMLFQEGNHARRPSLISKLPYSE 291
           A GF H+  +   G +  +G            D   D    +   +   P  + K     
Sbjct: 597 ALGFSHTCALLAGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNVAVPGPVRK----- 651

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP--FSESPVDQICT- 348
            +V GG HTC L    +L  WG   +G  G G  +  + P     P       +D I T 
Sbjct: 652 -IVAGGQHTCALLQNNKLRCWGDGGDGRTGYGERNGTN-PAYGDDPGELPNGSLDDIDTG 709

Query: 349 -SIVLVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
             +  V  G  HT A +S G +  WG G            S G+LG+ +  +   P  + 
Sbjct: 710 ADVTDVVAGGAHTCALLSNGALKCWGTG------------SNGRLGYSDTGNRGTPPALG 757

Query: 407 FG-ENVKALQVSCGFNHTGAL 426
              + V A Q++ G  HT AL
Sbjct: 758 VDLDGVSAYQIAAGEEHTCAL 778



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 138/332 (41%), Gaps = 59/332 (17%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK------------KAAKVIPIPTKVECL 174
           +I  G  H+  +T +G++  WG+N  GQLG G               A  +P+P      
Sbjct: 423 RIVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPA--- 479

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-LGFLRSTSEYTPRLIK 233
                +Q   G++ + A+   G +  WG    G+LG+ ++ ++  G   +++ Y      
Sbjct: 480 -----RQLVAGYDHTCALLESGLIYCWGKNNFGQLGYNRDDNVGDGEPVTSAGYV----- 529

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-------------LFQEGNHARR 280
            L G+  KIAA G  H+  I E G +  +G+    ++             +F  GN    
Sbjct: 530 TLGGLATKIAAGGN-HTCAILEGGFLRCWGENTYGQLGLGHSNPIGDNENVFAAGNVELG 588

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE--RVQGPF 338
             ++      E++  G  HTC L +GG +  WG N +G LG G  D L   E    QG  
Sbjct: 589 DGVV-----VEDIALGFSHTCALLAGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNV 643

Query: 339 S-ESPVDQICTSIVLVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
           +   PV +I         G +HT A +   K+  WG GG   T    G  +G    +G+D
Sbjct: 644 AVPGPVRKIV-------AGGQHTCALLQNNKLRCWGDGGDGRTGY--GERNGTNPAYGDD 694

Query: 397 V-DYIHPTIVNFGENVKALQVSCGFNHTGALL 427
             +  + ++ +         V  G  HT ALL
Sbjct: 695 PGELPNGSLDDIDTGADVTDVVAGGAHTCALL 726



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 125/327 (38%), Gaps = 69/327 (21%)

Query: 20  LGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG 79
           L +K+        + L+  F   WG   YG+LGLG                         
Sbjct: 534 LATKIAAGGNHTCAILEGGFLRCWGENTYGQLGLG------------------------- 568

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
             H+  + +   V+A G  + G   + E+                   I+ G+ H+ A+ 
Sbjct: 569 --HSNPIGDNENVFAAGNVELGDGVVVED-------------------IALGFSHTCALL 607

Query: 140 VDGELYMWGKNSNGQLGLGK----------KAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
             G +  WG N +GQLG G           +    + +P  V        ++   G + +
Sbjct: 608 AGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNVAVPGPV--------RKIVAGGQHT 659

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQES-SILGFLRSTSEYTPRLIKELE-GVKVKIAAAGF 247
            A+    K+  WG GG GR G+G+ + +   +     E     + +++ G  V    AG 
Sbjct: 660 CALLQNNKLRCWGDGGDGRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGADVTDVVAGG 719

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
            H+  +  NG +  +G  +  ++ + + GN    P+L   L    + ++  G  HTC L 
Sbjct: 720 AHTCALLSNGALKCWGTGSNGRLGYSDTGNRGTPPALGVDLDGVSAYQIAAGEEHTCALR 779

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSP 331
           S G    WG   +G LG GS   + SP
Sbjct: 780 SNGTARCWGRGLSGRLGSGSEADILSP 806



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 13/138 (9%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQICTSIV 351
           +V G  HTCVLT  G++  WG N+ G LG G++ D+  +   +     + P+ +    +V
Sbjct: 424 IVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPARQLV 483

Query: 352 LVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
               G+ HT A+ E G I  WG       F + G++    +G G  V       V  G  
Sbjct: 484 ---AGYDHTCALLESGLIYCWG----KNNFGQLGYNRDDNVGDGEPV--TSAGYVTLGG- 533

Query: 411 VKALQVSCGFNHTGALLE 428
             A +++ G NHT A+LE
Sbjct: 534 -LATKIAAGGNHTCAILE 550


>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
          Length = 576

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 122/235 (51%), Gaps = 11/235 (4%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++CG  H++ +   G V+A G    GQLGI E    S  P +I  L   +++Q+S G++H
Sbjct: 6   VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 65

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A++ DG ++ WG+NS GQLGLGK  ++   IP KV+ L GI   Q A G   S A++ 
Sbjct: 66  SLALSEDGHVFSWGRNSEGQLGLGKN-SRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 124

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G    WG+  SG+L      ++ G       Y P  I  L+ + V   + G+ H+A + 
Sbjct: 125 TGTSFGWGSNRSGQL------ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLT 178

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSEEVVCGGYHTC--VLTSG 306
           E G+V+ FG  +  ++     +  R P LI  +     ++ C  YHT   V T+G
Sbjct: 179 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTG 233



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 27/258 (10%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           +S G  HS A+   G+++ WG  S GQLG+G+   ++  +PTK++ L+GI   Q + G  
Sbjct: 6   VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHY 64

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S+A++  G V SWG    G+LG G+ S         S+  P+ +K LEG+ +   AAG 
Sbjct: 65  HSLALSEDGHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGG 116

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTC 301
            HS  +   G  + +G     ++    GN  +    +P  I  L     +   CG  HT 
Sbjct: 117 THSFALSLTGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTA 175

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
           VLT  G+++T+G N +G L          P+ ++G         I   +  + C   HT 
Sbjct: 176 VLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG---------IGGRVSQIECASYHTI 226

Query: 362 A--ISEGKILTWGWGGSH 377
           A   + G++++ G G SH
Sbjct: 227 AYVYTTGQVVSLGRGPSH 244



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 25  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 84

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 85  QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 144

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 145 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 204

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 205 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 239



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 95/248 (38%), Gaps = 81/248 (32%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E SVAV   GKV +WGAG  G+LG G+   I         + P  IK L G+K+    
Sbjct: 9   GKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKII--- 57

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
                                                          +V CG YH+  L+
Sbjct: 58  -----------------------------------------------QVSCGHYHSLALS 70

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
             G +++WG N  G LG+G      + P++V+      P+ Q       V+ G  H+ A+
Sbjct: 71  EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQ-------VAAGGTHSFAL 122

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIVNFGENVKALQVSCGF 420
           S     ++GWG +            GQL   GN V      P  +   +N+  + +SCG+
Sbjct: 123 SLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 171

Query: 421 NHTGALLE 428
            HT  L E
Sbjct: 172 EHTAVLTE 179


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG  +S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P +IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G            
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 38/329 (11%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ +    ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQS-TIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGP---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + + G VY++G     ++    G +   P  ++ L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV----DQ 345
            + V CG  HT VLT  G++Y WG+N  G LG G+      P         +PV    D+
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP---------TPVVVEKDR 309

Query: 346 ICTSIVLVSCGWKHTAAISE--GKILTWG 372
           I   I + +C   HT+A     G +  WG
Sbjct: 310 I---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 33/241 (13%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       LG  +ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------LGDAQSTIE--PRRLDSLSGKKIACLSYGSGPHVV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
                G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GK 367
           ++ WG N +G +G G       P RV G      V       V ++CG   + A+ + G+
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVV-------VNIACGQMCSMAVVDTGE 225

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
           +  WG+ G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L 
Sbjct: 226 VYVWGYNGN------------GQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273

Query: 428 E 428
           +
Sbjct: 274 D 274



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDAQSTIEP--RRLDSLSG--KKIACLSYGSGPHVVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 230 GYNGNGQLGLGSGGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTDEGQV 278

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 279 YAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3848 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPIQLIGGEQTLFAVTADGKLYATGYGAG 3905

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3906 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3963

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3964 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4018

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4019 ------SEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4073 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4132

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4133 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4172

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4173 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4206



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTLPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 46/325 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TLPLEEPKVISAFSG 547

Query: 177 I----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
                     A G   S A+T  G++ +WG G  GRLGHG          S  E  P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598

Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
             L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
           +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D    
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID---- 714

Query: 349 SIVLVSCGWKHTAAISE-GKILTWG 372
               V+ G  H  A++E  ++ +WG
Sbjct: 715 ----VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 134/304 (44%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 19/242 (7%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TW 312
            TW
Sbjct: 3229 TW 3230



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3843 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATG 3901

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3902 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3961

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3962 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4012

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4013 RLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4073 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4118

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4119 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4151



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
              ++   IP  +E L+G    Q   G + S+A+T  G V +W
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTLPL---------EEPKVISAFSGKQGGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              ++ V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVIKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
           +  K  P PT    L G+ TK     A G  QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R I+ + G +   A         +
Sbjct: 3841 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFA---------V 3891

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3892 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3951

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3952 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4003

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 4004 YTWGKG------------RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACG 4042


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 166/375 (44%), Gaps = 56/375 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C +  +  +K + C     L LT TG VY               + YS E   P +I
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYI--------------MYYSSETQCPEQI 513

Query: 119 SGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
            G   KE+ +++      HS A++ DG++Y WG    G+LG G   ++    PTK+  L 
Sbjct: 514 EGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSR--DQPTKITELV 571

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
           G      + G   S AVT  G+V +WG G  GRLGHG          S     P L+  L
Sbjct: 572 GKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGT---------SEDHTVPTLVVGL 622

Query: 236 EG-VKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
           +    V IA  +G   +  +   G V+ +GD    K+     + ++ P LI KL   E  
Sbjct: 623 KDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVA 682

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
            V CG   +  LT  G +YTWG  +N  LG GS + +  P+ V+G      ++  C   V
Sbjct: 683 RVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG------LNGKCIKKV 736

Query: 352 LVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
            V  G  H  A++ +G++  +GW          G +  GQ+G  ++ +   PT++   + 
Sbjct: 737 AVGSG--HVLALTDDGEV--YGW----------GRNDNGQVGETSETNVSEPTLLTLLQG 782

Query: 411 VKALQVSCGFNHTGA 425
              + + CG N + A
Sbjct: 783 KNIVDIDCGPNQSIA 797



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 137/299 (45%), Gaps = 27/299 (9%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  D G+LG     G    P  I  L+ KE+V I+ G  
Sbjct: 4059 AVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCD-HPQLIDALQGKEIVDIACGGA 4117

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
            HS+A+T  GE+Y WGK   G+LG G    ++ P    VE L G      A G    Q++ 
Sbjct: 4118 HSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKP--KLVETLIGFKVIDIACGSGDAQTLC 4175

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S 
Sbjct: 4176 ITDDDNVWSWGDGDYGKLGRGG---------SDGCKIPMKIESLAGLGVVKVECGSQFSV 4226

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGE 308
             +  +G VY +G     ++      H R P  I+ L   ++++C   G  H    +  GE
Sbjct: 4227 ALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAAL-QGKKIICIATGSLHCVACSDLGE 4285

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
            ++TWG N+ G LG G+++ +H P  V        V     +I  V+CG  H+ A S  K
Sbjct: 4286 VFTWGDNDEGQLGDGTMNAIHRPRLV--------VTLQGKNINRVACGSAHSLAWSTNK 4336



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG  +  S  RP +  A +   ++ +ACG +H+  ++ TG ++  GL ++G+
Sbjct: 3096 WGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGR 3155

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N+      L  + L   +VQ++ G   +   A++ +G ++ WG    G+LG G  
Sbjct: 3156 LGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG-- 3213

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G+       G + S+A+T  G+V +WG G   RLGHG +  +   
Sbjct: 3214 GSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHV--- 3270

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P L++ L   K+   A G LH  C  + G+VY +GD        Q+GN    
Sbjct: 3271 ------RKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHG----QQGNGTIL 3320

Query: 279  --RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
              R+PSL+  L       V CG  H+   T+
Sbjct: 3321 VNRKPSLVLNLEGVRVNRVACGSSHSIAWTT 3351



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 176/396 (44%), Gaps = 50/396 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         P  C A        L  G    L +T  G VYATG    G+
Sbjct: 3973 WGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGR 4032

Query: 103  LGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LG+           LE ++   +KK  V +++G  H  A++ DG++Y WG+  +G+LG G
Sbjct: 4033 LGLGGTDTILTPTLLESIQHIFIKK--VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG 4090

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             K       P  ++ L G      A G   S AVT GG++ +WG G  GRLGHG      
Sbjct: 4091 NKNG--CDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGD----- 4143

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  +  P+L++ L G KV   A  +G   + CI ++  V+ +GD    K+     +
Sbjct: 4144 ----SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD 4199

Query: 277  HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS + +  P+++
Sbjct: 4200 GCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKI 4259

Query: 335  ---QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
               QG             I+ ++ G  H  A S+ G++ TW            G +  GQ
Sbjct: 4260 AALQG-----------KKIICIATGSLHCVACSDLGEVFTW------------GDNDEGQ 4296

Query: 391  LGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGA 425
            LG G  ++ IH P +V   +     +V+CG  H+ A
Sbjct: 4297 LGDGT-MNAIHRPRLVVTLQGKNINRVACGSAHSLA 4331



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 187/406 (46%), Gaps = 68/406 (16%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTLFLTE-TGCVYATG 96
            +WG  D  +LG G   S+ +  V S     SL AL      GG+ +LF+    G +YA G
Sbjct: 2989 VWGLNDKDQLG-GLKGSKVKVPVYS----ESLTALKPIHIAGGSKSLFIVSYDGKLYACG 3043

Query: 97   LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNS 151
                G+LG+  S N+     P +++ L + V++   + +G  H+ A+T+DG+++ WG+  
Sbjct: 3044 EGTNGRLGLGHSNNVA---TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3100

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+LG   + +  +  P  +E L     +  A G   S A++  G++ +WG G  GRLGH
Sbjct: 3101 DGKLGHDNRLS--LDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGH 3158

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDK 269
            G          + ++  P+L+K L G  +   A G     +  +   G V+ +GD    K
Sbjct: 3159 GD---------NLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGK 3209

Query: 270  MLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCL 320
            +        R  S    +P++ E         + CG   +  LT  G++YTWG  +   L
Sbjct: 3210 L-------GRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRL 3262

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH-TAAISEGKILTWGWGGSHGT 379
            G GS   +  P  V+   SE         IV V+ G  H   A  +G++  WG       
Sbjct: 3263 GHGSDQHVRKPTLVES-LSEK-------KIVHVAVGALHCLCATDQGQVYAWG------- 3307

Query: 380  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
              ++ H   GQ G+G  +    P++V   E V+  +V+CG +H+ A
Sbjct: 3308 --DNDH---GQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIA 3348



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 151/348 (43%), Gaps = 46/348 (13%)

Query: 89   TGCVYATGLNDFGQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            +G +Y  G N  GQLG  E     I  S E L  S L+   VQ+  G     A+T DG++
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEAL--SALRP--VQLVGGEQTLLAVTSDGKV 4022

Query: 145  YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWG 202
            Y           LG      I  PT +E +  IF K+ A+  G +  +A++  GKV SWG
Sbjct: 4023 Y--ATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWG 4080

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G  G+LGHG ++             P+LI  L+G ++   A G  HSA +   G +Y +
Sbjct: 4081 EGDDGKLGHGNKNGC---------DHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTW 4131

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENG 318
            G     ++   +     +P L+  L   +  ++ CG     T  +T    +++WG  + G
Sbjct: 4132 GKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4191

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSH 377
             LG G  D    P +++              +V V CG + + A++  G + TWG G  H
Sbjct: 4192 KLGRGGSDGCKIPMKIESLAG--------LGVVKVECGSQFSVALTRSGSVYTWGKGDYH 4243

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                        +LGHG+D    HP  +   +  K + ++ G  H  A
Sbjct: 4244 ------------RLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVA 4279



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 23/228 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G   SR +P   +     ++  ++CG  ++  +T +G VY  G  ++G+
Sbjct: 545 WGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGR 604

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
           LG   +  +++ P  + GLK   +V I+  +G   + A+T  G ++ WG    G+LG   
Sbjct: 605 LGHGTSEDHTV-PTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGG 663

Query: 158 --GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
             G K  K+I      E L  I   +   G + S+A+T  G V +WG G + RLGHG E+
Sbjct: 664 SDGSKTPKLI------EKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSEN 717

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+L++ L G  +K  A G  H   + ++G VY +G
Sbjct: 718 HV---------RFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWG 756



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 33/274 (12%)

Query: 115  PLRISGLK---KEVVQISTGYHHSSAITV----DGELYMWGKNSNGQLGLGKKAAKVIPI 167
            PL +S L    +E+ ++ T    SS   +      ++++WG N   QLG G K +KV  +
Sbjct: 2951 PLNVSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLG-GLKGSKV-KV 3008

Query: 168  PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            P   E L+ +     A G +    V+  GK+ + G G +GRLG G  +++          
Sbjct: 3009 PVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNV---------A 3059

Query: 228  TPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            TP  +  L    +K  A  +G  H+  +  +G+V+ +G+    K+         RP +I 
Sbjct: 3060 TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIE 3119

Query: 286  KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
             L      ++ CG  H+  ++S GEL+TWG  E G LG G       P+ V+        
Sbjct: 3120 ALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGH--- 3176

Query: 344  DQICTSIVLVSCGWK--HTAAIS-EGKILTWGWG 374
                  IV V+CG +   T A+S EG + +WG G
Sbjct: 3177 -----HIVQVACGSRDAQTLALSAEGLVFSWGDG 3205



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 36/248 (14%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           + S+A++  G V SWG G  GRLGHG          + S   P  I EL G  V   + G
Sbjct: 531 KHSLALSCDGDVYSWGNGDGGRLGHGD---------NNSRDQPTKITELVGKNVIHISCG 581

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCV 302
             +SA +  +G VY +G     ++          P+L+  L   +  ++ CG     T  
Sbjct: 582 ATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLA 641

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           +T+ G +++WG    G LG G  D   +P+ ++       +  I   +  V CG + + A
Sbjct: 642 VTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEK------LQDI--EVARVYCGSQFSLA 693

Query: 363 ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCGF 420
           +++ G + TWG G +H            +LGHG++     P +V  G N K + +V+ G 
Sbjct: 694 LTKSGSVYTWGKGDNH------------RLGHGSENHVRFPKLVE-GLNGKCIKKVAVGS 740

Query: 421 NHTGALLE 428
            H  AL +
Sbjct: 741 GHVLALTD 748



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG GS      P +        +K +A G  H L LT+ G VY  G ND GQ
Sbjct: 703 WGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQ 762

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
           +G +     S EP  ++ L+ K +V I  G + S A
Sbjct: 763 VGETSETNVS-EPTLLTLLQGKNIVDIDCGPNQSIA 797



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)

Query: 223 STSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           S+    P  I+  +G ++ K+AA A   HS  +  +G VY +G+    ++   + N   +
Sbjct: 504 SSETQCPEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQ 563

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P+ I++L       + CG  ++  +TS GE+YTWG    G LG G+ +    P  V G  
Sbjct: 564 PTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLK 623

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
               VD  C S      G   T A++    L + WG         G S G +        
Sbjct: 624 DYFIVDIACGS------GDAQTLAVTNTG-LVFSWGDGGYGKLGTGGSDGSKT------- 669

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGAL 426
              P ++   ++++  +V CG   + AL
Sbjct: 670 ---PKLIEKLQDIEVARVYCGSQFSLAL 694



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+ D G+LG G++ +  RP +    +  ++  +ACG AH+L  +      AT       
Sbjct: 4289 WGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSAT------H 4342

Query: 103  LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELY-MWGKNSNGQL 155
            L +   + Y L   + +  L+  +V +   +H S  ++ +  ++ M G+ S  QL
Sbjct: 4343 LPVDAPMEYDLVRDISLPTLRNRLVLL---HHFSELVSPNVAMFPMEGEGSLDQL 4394



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 35/140 (25%)

Query: 291 EEVVCGGYHTCVLTSGGELY-TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
           +++VC      +LT  G++Y  + S+E  C           PE+++G       D    S
Sbjct: 480 KQIVCAERWLLILTLTGKVYIMYYSSETQC-----------PEQIEG------FDGKEIS 522

Query: 350 IVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-- 406
            +      KH+ A+S +G + +WG G             GG+LGHG++     PT +   
Sbjct: 523 KLAAHADGKHSLALSCDGDVYSWGNG------------DGGRLGHGDNNSRDQPTKITEL 570

Query: 407 FGENVKALQVSCGFNHTGAL 426
            G+NV  + +SCG  ++ A+
Sbjct: 571 VGKNV--IHISCGATYSAAV 588


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 177/394 (44%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LG+      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G      A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    SE G++ TW            G +  GQL
Sbjct: 4244 QVQGLQGK--------KVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQL 4283

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4284 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 133/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G +V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4184 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4229

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4230 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKV---------KVPTPCEALAALRPVQLIGGEQTLFAV 4002

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4003 TADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++            T +V V+ G  H+A ++  G +
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRG--------TEVVDVAAGGAHSACVTAAGDL 4114

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4115 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4153


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 177/394 (44%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LG+      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4018 GRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G      A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4076 HGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    SE G++ TW            G +  GQL
Sbjct: 4245 QVQGLQGK--------KVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQL 4284

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4285 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 133/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G +V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4185 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4230

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSVALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKV---------KVPTPCEALAALRPVQLIGGEQTLFAV 4003

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4004 TADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++            T +V V+ G  H+A ++  G +
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRG--------TEVVDVAAGGAHSACVTAAGDL 4115

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4116 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4154



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776


>gi|284032915|ref|YP_003382846.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
           17836]
 gi|283812208|gb|ADB34047.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
           17836]
          Length = 666

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 152/352 (43%), Gaps = 43/352 (12%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            G  H++ L   G V+  G N+ GQLG          P+++ GL   VV I+ G++HS A
Sbjct: 66  AGREHSIALRSDGTVWTWGFNEMGQLGDGTATNRP-APVQVGGLSG-VVDIAGGHYHSLA 123

Query: 138 ITVDGELYMWGKNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           +  DG +  WG NS GQLG G   +A+  P+   V  LSG+     A G + S AV   G
Sbjct: 124 LLADGTVRAWGYNSFGQLGNGATTSAQRTPV--AVTPLSGVL--AIAGGRDMSYAVRSDG 179

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V  WG   +G+LG G          +T    P  +  L G+     + G  H   +  +
Sbjct: 180 TVWGWGLNTTGQLGDGT---------TTMRTRPVRVGSLAGITA--ISGGRDHGLAVRSD 228

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G V+ +GD    ++      +   P  +  +  + EV  G YH+    +GG L +WG N 
Sbjct: 229 GTVWAWGDNTQGQVGDGSLTNRLAPVQVPGVTGAVEVAAGAYHSIARLTGGTLRSWGQNS 288

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGG 375
           NG LG G+         V G           +    ++ G +H+ A +S G +  W    
Sbjct: 289 NGQLGDGTTTRRTQSVAVPG----------VSGATAIATGRQHSVAVVSGGALRAW---- 334

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
                   G ++ GQLG G   D   P  V       A +VS G +HT AL+
Sbjct: 335 --------GSNAAGQLGDGTSTD--RPNAVTVAGIAGAAEVSAGRDHTLALV 376



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 129/303 (42%), Gaps = 42/303 (13%)

Query: 128 ISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           ++TG H S A  V+ G  + WG N  GQLG G    +    P  V  L+ +   +A  G 
Sbjct: 13  LATGLHQSEAAAVEPGSAWAWGGNGTGQLGNGTTTGRGTAAP--VTSLTNVTEVEA--GR 68

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           E S+A+   G V +WG    G+LG G          +T+   P  +  L GV V I A G
Sbjct: 69  EHSIALRSDGTVWTWGFNEMGQLGDGT---------ATNRPAPVQVGGLSGV-VDI-AGG 117

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTS 305
             HS  +  +G V  +G  +  ++       A+R P  ++ L     +  G   +  + S
Sbjct: 118 HYHSLALLADGTVRAWGYNSFGQLGNGATTSAQRTPVAVTPLSGVLAIAGGRDMSYAVRS 177

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-S 364
            G ++ WG N  G LG G+  +   P RV               I  +S G  H  A+ S
Sbjct: 178 DGTVWGWGLNTTGQLGDGTTTMRTRPVRVGS----------LAGITAISGGRDHGLAVRS 227

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
           +G +  W W          G ++ GQ+G G+  + + P  V       A++V+ G  H+ 
Sbjct: 228 DGTV--WAW----------GDNTQGQVGDGSLTNRLAP--VQVPGVTGAVEVAAGAYHSI 273

Query: 425 ALL 427
           A L
Sbjct: 274 ARL 276


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 162/377 (42%), Gaps = 53/377 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG  S      P +        +K +ACG A +  L E G +Y  G N +GQ
Sbjct: 133 WGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQ 192

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +    ++  +  S   + V  ++ G  H   +T   ++Y WG NS GQLG G +  
Sbjct: 193 LGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKK 252

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  P  V  +SG+  KQ   G   S  +T  G + +WG G  G+LGHG          
Sbjct: 253 HCLQ-PKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDME------- 304

Query: 223 STSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDR-------AVDKMLF 272
             S+  P L+  L+      + ++ A F+    +  +G VY +G          VD M +
Sbjct: 305 --SKDIPTLLSPLDPKTQASLIVSGADFI--MAMTYSGAVYSWGRNCFGQLGHGVD-MHY 359

Query: 273 QEGNH----ARRPSLISKLPYSEE--------VVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            + N        P +IS    SEE        + CG +H   +T   + L+ WG  E+G 
Sbjct: 360 SKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQ 419

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVL-VSCGWKHTAAIS-------EGKILTW 371
           LG+   D    P   +       V ++   IVL  +C   H+  ++       +G +  +
Sbjct: 420 LGLDPRDTSFRPIPQE-------VKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVF 472

Query: 372 GWGGSHGTFSEDGHSSG 388
            WG   G+F + G+ SG
Sbjct: 473 SWG--RGSFGQLGYGSG 487



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 169/384 (44%), Gaps = 30/384 (7%)

Query: 15  KQDIKLGSKLGICKRWISSTLQRRFAALWGNGD-YGRLGLGSLESRWRPVVCSAFEKHSL 73
           KQD+K    + I +R  +   + +     G    +GR    S  +  RP    +    S+
Sbjct: 55  KQDLKEALSMNIFQRARTEIAKSKLHLTAGATRIHGRF---STYNSQRPQEVVSLAGLSI 111

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY 132
           K + CG  H L L  +G + + G  + GQLG + +  +S  P  I  L  + V +++ G 
Sbjct: 112 KLITCGSDHVLALDASGKIRSWGRGESGQLGHA-SFSHSSTPSIIDELASQRVKEVACGV 170

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             S+A+   G+LY WG N  GQLG G + +    IP  +  ++       A G    V +
Sbjct: 171 AFSAALMEGGQLYTWGCNRYGQLGQGDRTSSA--IPRMLPSMNHRHVHLMACGAAHIVVL 228

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T    V +WG    G+LGHG         R      P+ ++ + G+ +K   AG  HS  
Sbjct: 229 TTSRDVYTWGNNSYGQLGHG--------FRKKHCLQPKSVRVMSGLDIKQIVAGENHSCV 280

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSEE--VVCGGYHTCVLTSGGEL 309
           +   G +Y +G     ++   +      P+L+S L P ++   +V G      +T  G +
Sbjct: 281 MTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAV 340

Query: 310 YTWGSNENGCLGIGSIDVLHS-----PERVQGP----FSESPVDQICTSIVLVSCGWKHT 360
           Y+WG N  G LG G +D+ +S     P  V  P    F  +  +    S+  +SCG  H 
Sbjct: 341 YSWGRNCFGQLGHG-VDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHV 399

Query: 361 AAISEGKILTWGWG-GSHGTFSED 383
            AI+E K   + WG G HG    D
Sbjct: 400 LAITEKKDTLFAWGRGEHGQLGLD 423



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 143/321 (44%), Gaps = 50/321 (15%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           I+ G  H  A+   G++  WG+  +GQLG    +    P  + ++ L+    K+ A G  
Sbjct: 114 ITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTP--SIIDELASQRVKEVACGVA 171

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S A+  GG++ +WG    G+LG G           TS   PR++  +    V + A G 
Sbjct: 172 FSAALMEGGQLYTWGCNRYGQLGQGDR---------TSSAIPRMLPSMNHRHVHLMACGA 222

Query: 248 LHSACIDENGRVYIFGDRAVDKML--FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVL 303
            H   +  +  VY +G+ +  ++   F++  H  +P  +  +     +++V G  H+CV+
Sbjct: 223 AHIVVLTTSRDVYTWGNNSYGQLGHGFRK-KHCLQPKSVRVMSGLDIKQIVAGENHSCVM 281

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           TS G++YTWG  + G LG G ++    P  +      SP+D    + ++VS      A  
Sbjct: 282 TSFGDIYTWGRGDFGQLGHGDMESKDIPTLL------SPLDPKTQASLIVSGADFIMAMT 335

Query: 364 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV----------DYIHPTIVNF------ 407
             G + +WG             +  GQLGHG D+          D I P I++F      
Sbjct: 336 YSGAVYSWG------------RNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEE 383

Query: 408 GENVKALQVSCGFNHTGALLE 428
            + +    +SCG +H  A+ E
Sbjct: 384 HDAISLSSISCGSHHVLAITE 404



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 140/326 (42%), Gaps = 46/326 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G   S   P +  +     +  +ACG AH + LT +  VY  G N +GQ
Sbjct: 185 WGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQ 244

Query: 103 LGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG      + L+P  +   SGL  ++ QI  G +HS  +T  G++Y WG+   GQLG G 
Sbjct: 245 LGHGFRKKHCLQPKSVRVMSGL--DIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGD 302

Query: 160 KAAKVIPIPTKVECLSGIFTK-QAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
             +K IP       LS +  K QA+L   G +  +A+T  G V SWG    G+LGHG + 
Sbjct: 303 MESKDIPT-----LLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDM 357

Query: 216 SILGFLRSTSEY-TPRLI------KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
                 R  S+  +P++I      +E + + +   + G  H   I E         R   
Sbjct: 358 HYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRG-- 415

Query: 269 KMLFQEGNHARRPSLISKLPYSEEV-----------VCGGYHTCVLTS--------GGEL 309
               + G     P   S  P  +EV            C   H+ V+ +          ++
Sbjct: 416 ----EHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKV 471

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQ 335
           ++WG    G LG GS  V    E VQ
Sbjct: 472 FSWGRGSFGQLGYGSGKVPVMKETVQ 497



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 34/222 (15%)

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           I G   + +   P+ +  L G+ +K+   G  H   +D +G++  +G     ++     +
Sbjct: 88  IHGRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFS 147

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           H+  PS+I +L     +EV CG   +  L  GG+LYTWG N  G LG             
Sbjct: 148 HSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLG------------- 194

Query: 335 QGPFSESPVDQICTS-----IVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSG 388
           QG  + S + ++  S     + L++CG  H   ++  + + TW            G++S 
Sbjct: 195 QGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTW------------GNNSY 242

Query: 389 GQLGHGNDVDY-IHPTIVNFGENVKALQVSCGFNHTGALLEY 429
           GQLGHG    + + P  V     +   Q+  G NH+  +  +
Sbjct: 243 GQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSF 284


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)

Query: 43  WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG G++G+LGL      +    P       +     +ACG +HTL LT +G VY+ G   
Sbjct: 4   WGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG LG       S   +  S     +VQI+ G +HS A+TV+G+L+ WG+   GQLG G 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               + P+P  V  LS     Q   G + ++A+   G++ SWG G  G+ GHG + +IL 
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                    P+L+  LE   +  A+AG  H+  +   G VY +GD    ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 96  GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
           G  +FGQLG+ +  G    PL R     +E+  V+++ G  H+ A+T  G++Y +G+ + 
Sbjct: 5   GCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G LG G   +   P+   V+ L G+   Q A G   S A+T  G++ SWG G  G+LG G
Sbjct: 65  GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              + L  +  T+  + RL+ ++          G  ++  ID +G+++ +G     +   
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173

Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
              ++   P L+  L      +   G  H   LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 29/232 (12%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           ++SWG G  G+LG    + +       +   PR ++    +     A G  H+  +  +G
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVF------NSPLPRFLRGSRELLFVRVACGSSHTLALTGSG 54

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
            VY FG      +          P ++  L      ++ CG  H+C LT  G+L++WG  
Sbjct: 55  DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRG 114

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
           + G LG GS++    P  V      +  D++ T +V   CG  +T AI S+G++ +W   
Sbjct: 115 KYGQLGCGSVENHLQPVPV-----TALSDRLLTQVV---CGADYTMAIDSDGQLFSW--- 163

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    GH   GQ GHG   + + P +V   EN   +Q S G  H  AL
Sbjct: 164 ---------GHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVAL 206


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 134/272 (49%), Gaps = 19/272 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
           ++ TP  +  L+G+ V+  A G+ H+  + + G+VY +G  +  ++     ++   P+ I
Sbjct: 244 NQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPI 303

Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           S  K    E   C   HT    T GG +Y WG
Sbjct: 304 SVEKDRIIEIAACHSTHTSAAKTQGGNVYMWG 335



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 26/296 (8%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
           L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +
Sbjct: 59  LYTTVNNEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 117

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           GE++ WG N+  QLG G     ++P       LS     + A G   S+ +T  G+V +W
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCYISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 176

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVY 260
           G   SG++G G          + ++  PR +   L+   V   A G + S  + + G VY
Sbjct: 177 GYNNSGQVGSGS---------TANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVY 227

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++G     ++      +   P  ++ L   + + V CG  HT VLT  G++Y WG+N  G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            LG G+     S +    P S    D+I   I + +C   HT+A     G +  WG
Sbjct: 288 QLGTGN----KSNQSYPTPISVEK-DRI---IEIAACHSTHTSAAKTQGGNVYMWG 335



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G            ++V ++CG   + A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNK-------AVVNIACGQMCSMAVVDAGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + +   +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTD 274



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  IS  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             +  +P  T+  C   +F
Sbjct: 341 --SVTLPHLTRFSCTDDVF 357



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 127/298 (42%), Gaps = 47/298 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNNEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACID 254
           G+V +W        GH   S  LG   +     P  I   L   +V   A G  HS  + 
Sbjct: 118 GEVFTW--------GHNAYSQ-LGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLT 168

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
            +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y 
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYV 228

Query: 312 WGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGK 367
           WG N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG+
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQG-----------IHVQRVACGYAHTLVLTDEGQ 277

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           +  WG             +S GQLG GN  +  +PT ++  ++      +C   HT A
Sbjct: 278 VYAWG------------ANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSA 323


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 158/353 (44%), Gaps = 44/353 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 3949 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4006

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI      S  P  +  L+  +++   +++G  H  A++ DGE++ WG+  +G+LG 
Sbjct: 4007 GRLGIGGTDSVS-TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4065

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG     
Sbjct: 4066 GNRDS--YDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQ 4123

Query: 218  LG----FLRST--------------------SEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            L      LR+T                       +P  I+ L G+ V     G   S  +
Sbjct: 4124 LQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVAL 4183

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE++T
Sbjct: 4184 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFT 4243

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
            WG N+ G LG G++  +  P  VQ    +         IV V CG  HT A+S
Sbjct: 4244 WGDNDEGQLGDGTVTAIQRPRLVQSLQGK--------HIVKVICGSAHTLALS 4288



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 187/395 (47%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 2911 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHISGGSKSLFIVSQDGKLYACGEG 2967

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2968 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3026

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3027 GHGNRV--TLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3082

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L+G +V   A G     + C+ E G V+ +GD    K+   
Sbjct: 3083 -------NCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3135

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3136 GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKP 3195

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
              +QG   +         ++ V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3196 TPIQGLRGKK--------VIHVAVGALHCLAVTDSGQVFAWG---------DNDH---GQ 3235

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G GN V    P +V   + V   +V+CG +H+ A
Sbjct: 3236 QGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVA 3270



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 161/353 (45%), Gaps = 64/353 (18%)

Query: 96   GLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
            GLND  QLG             ++   L+P+ ISG  K +  +S           DG+LY
Sbjct: 2913 GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQ----------DGKLY 2962

Query: 146  MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGA 203
              G+ +NG+LGLG      +P P +V  L+    K+ A+  G + ++A+T  GKV SWG 
Sbjct: 2963 ACGEGTNGRLGLGHN--NNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3020

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G  G+LGHG         R T E  P+L++ L   +++  A G  HSA I  +G +Y +G
Sbjct: 3021 GEDGKLGHGN--------RVTLE-KPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWG 3071

Query: 264  DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSNENGC 319
                 ++   +     +P L++ L      +V CG     T  LT  G +++WG  + G 
Sbjct: 3072 LGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3131

Query: 320  LGIGSID---VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGG 375
            LG G  +   V H  ER+ G             +V + CG + + A+++ G++ TWG G 
Sbjct: 3132 LGRGGSEGCSVPHQVERLNG-----------VGVVQIECGAQFSLALTKIGEVWTWGKGD 3180

Query: 376  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +            +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3181 YY------------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3221



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A  C G H + L+  G VY+ G  + G+LG  +     + P +I+ L+K+V  I  G  +
Sbjct: 583 AAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEV-PTKIA-LEKQVTAIYAGASY 640

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+A++  GEL+ WG+ + G+LG G    K   +PT+V+ L        ALG     S+AV
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGNSDDKF--VPTQVQALKAYKVVDVALGSGDAHSMAV 698

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSA 251
           T GG + +WG G  G+LG+G           +   +P L  ++EGV  V    +G   S 
Sbjct: 699 TDGGLLFAWGDGDFGKLGNG-----------SCNGSP-LPVQIEGVSSVARIYSGSQFSV 746

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +  +G +Y +G     ++      H+  P L+  L   +  +V  G  H   LTS GEL
Sbjct: 747 ALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGEL 806

Query: 310 YTWGSNE 316
           Y WG N+
Sbjct: 807 YGWGRND 813



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 6/162 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + ++ P    A + + +   AL  G AH++ +T+ G ++A G  DF
Sbjct: 653 WGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDF 712

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG     G  L P++I G+   V +I +G   S A++ DG LY WGK   G+LG G  
Sbjct: 713 GKLGNGSCNGSPL-PVQIEGVSS-VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNS 770

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
                 +P  V  L G      A+G    +A+T  G++  WG
Sbjct: 771 EHS--NVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 19/224 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ GRLG G   S+  P    A EK  + A+  G +++  ++  G ++  G   +G+
Sbjct: 603 WGAGEGGRLGHGDTASKEVPTKI-ALEKQ-VTAIYAGASYSAAVSSVGELFTWGRGTYGR 660

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N      P ++  LK  +VV ++  +G  HS A+T  G L+ WG    G+LG G 
Sbjct: 661 LG-HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNG- 718

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +    P+P ++E +S +   +   G + SVA++  G + SWG G  GRLGHG       
Sbjct: 719 -SCNGSPLPVQIEGVSSV--ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN------ 769

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              S     P+L+  LEG K+   A G  H   +  +G +Y +G
Sbjct: 770 ---SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 39/307 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
           ++ +AC       +T +G +Y+          I  +   ++ P  + GL+   V+QI+  
Sbjct: 536 VRQVACTENSIYIVTTSGQLYS----------IHSSCAETVAPKLVEGLEGVSVIQIAAH 585

Query: 132 Y--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
               H+ A++  GE+Y WG    G+LG G  A+K +P    +E  ++ I+      G   
Sbjct: 586 CEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA-----GASY 640

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
           S AV+  G++ +WG G  GRLGHG          S  ++ P  ++ L+  KV   A  +G
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGN---------SDDKFVPTQVQALKAYKVVDVALGSG 691

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             HS  + + G ++ +GD    K+     N +  P  I  +     +  G   +  L+  
Sbjct: 692 DAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYSGSQFSVALSYD 751

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
           G LY+WG    G LG G+ +  + P+ V     +  VD        V+ G  H  A+ S 
Sbjct: 752 GTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVD--------VAVGSAHCLALTSS 803

Query: 366 GKILTWG 372
           G++  WG
Sbjct: 804 GELYGWG 810



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 138/378 (36%), Gaps = 125/378 (33%)

Query: 144  LYMWGKNSNGQLGLGKKAAKV-IPIP---------------------------------- 168
            ++ WG N  GQLG G   +++ +P P                                  
Sbjct: 3946 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 169  ----------------TKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLG 210
                            T VE L  +  K+ A+  G +  +A++  G+V SWG G  G+LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            HG   S   + R      P+LI+ L G+ V   A G  HSACI   G V  +G     ++
Sbjct: 4065 HGNRDS---YDR------PKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRL 4115

Query: 271  LFQEGNHARRP--------------------SLISKLPYSE---------------EVVC 295
               +     +P                    SL  ++P                  +V C
Sbjct: 4116 GHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVEC 4175

Query: 296  GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVL 352
            G   +  LT  G +YTWG  +   LG G+ D +  P++V   QG             I+ 
Sbjct: 4176 GSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQG-----------KKIIS 4224

Query: 353  VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            ++ G  H  A S+ G++ TW            G +  GQLG G       P +V   +  
Sbjct: 4225 IATGSLHCVACSDSGEVFTW------------GDNDEGQLGDGTVTAIQRPRLVQSLQGK 4272

Query: 412  KALQVSCGFNHTGALLEY 429
              ++V CG  HT AL  Y
Sbjct: 4273 HIVKVICGSAHTLALSTY 4290



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 21/174 (12%)

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTWG 313
            + +V ++G    +++   +G+  + P+  S L   + + + GG  +  +++  G+LY  G
Sbjct: 2906 SSKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACG 2965

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWG 372
               NG LG+G  + + +P +V  P     ++Q     V V  G KH  A++ +GK+ +WG
Sbjct: 2966 EGTNGRLGLGHNNNVPTPRQV--PI----LNQYVVKKVAVHSGGKHAMALTLDGKVFSWG 3019

Query: 373  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             G       EDG     +LGHGN V    P ++      +   ++CG +H+ A+
Sbjct: 3020 EG-------EDG-----KLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAI 3061



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  GRLG G+ E    P +  A E   +  +A G AH L LT +G +Y  G ND+ Q
Sbjct: 757 WGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQ 816

Query: 103 LGISENIGYSLEPL 116
           +  S   G S +P+
Sbjct: 817 ICPS---GVSRDPI 827


>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
          Length = 791

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 29/333 (8%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   V S F   +  + ++ CG  H+  + +TG ++  G ND+GQLG+      S +P
Sbjct: 21  SRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHIS-KP 79

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
             +  LK E V  ++ G  H+   T   +++  G +  GQLG G  A   +   P+    
Sbjct: 80  SCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYD 139

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             LSG    Q A G   S+A+T  G V +WG+   G+LG    S ++   + T  + P  
Sbjct: 140 SGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVN--KPTKVHIPEP 197

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K++        +AG+ HS  + E+G VY+ G+    K+        +      +LP   
Sbjct: 198 VKQI--------SAGYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPA 249

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQICT 348
             V CGG+HT +L   G LY  GSN +G LG+G+ +  LH P+ + +G            
Sbjct: 250 VHVACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNE------- 302

Query: 349 SIVLVSCGWKHTAAISE-GKILTWGWGGSHGTF 380
           +I  +SCG  HTA ++E GK+ T G  G HG  
Sbjct: 303 TITRISCGESHTAVVTESGKLYTCG-DGRHGKL 334



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 148/292 (50%), Gaps = 25/292 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLG      +P    A +   +  +ACG AHTL  T +  ++A G +  G
Sbjct: 59  VFGSNDWGQLGLGHKNHISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEG 118

Query: 102 QL--GISENIGYSLE-PLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           QL  GIS  IG S+  P+ +  SGL   ++VQI+ G HHS A+T DG ++ WG N  GQL
Sbjct: 119 QLGRGISA-IGDSVNTPVLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQL 177

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           GL    + ++  PTKV     +  KQ + G+  S  +T  G V   G   SG+LG     
Sbjct: 178 GL-PDVSGLVNKPTKVHIPEPV--KQISAGYYHSTFLTESGLVYVCGESESGKLGID--- 231

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
               F   +++  P+ + +L    V +A  G  H+  + ENG +Y  G  +  ++ L   
Sbjct: 232 --ASF---STQVAPKQM-QLPSPAVHVACGGH-HTVILAENGNLYCTGSNSSGQLGLGTN 284

Query: 275 GNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +    P L+ +     E +    CG  HT V+T  G+LYT G   +G LG+
Sbjct: 285 LSELHIPKLLPRGMLRNETITRISCGESHTAVVTESGKLYTCGDGRHGKLGL 336


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 142/300 (47%), Gaps = 32/300 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           L+ G +H+L +   G V+A G +  G L     +     P+ + GL  ++V ++ G  HS
Sbjct: 37  LSAGDSHSLAVHADGSVWAWGASASG-LREEGALSRRFAPVPVPGLS-DIVSVAAGGAHS 94

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG L+ WG N  GQLG G   A+ +P+  +V  LSG+  +  A G   S+A+   
Sbjct: 95  LAVRADGTLWTWGGNPYGQLGDGTTTARALPV--QVAGLSGV--RAVATGLGHSLALRAD 150

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G  S  L         TPR I  L GV+  +AA GF HS  + +
Sbjct: 151 GTVWAWGLNQFGQLGDGTTSQWL---------TPRPIPGLSGVR-SVAAGGF-HSLVVRD 199

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +  V+ +G    D     +G+ +RR  P  I  L     V  G YH+  + + G L  WG
Sbjct: 200 DDTVWAWGSN--DYGELGDGSTSRRAVPRAIPGLRNVASVAGGCYHSLAVHADGTLSAWG 257

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWG 372
            N  G LG G+     +P  V G           + +  V+  + H+ A+ +EG +  WG
Sbjct: 258 LNSYGQLGDGTFSNRATPRPVPG----------LSGVRCVATSFFHSLALRAEGTVWAWG 307



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 26/296 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+  +R  PV  +      ++A+A G  H+L L   G V+A GLN FGQ
Sbjct: 106 WGGNPYGQLGDGTTTARALPVQVAGLS--GVRAVATGLGHSLALRADGTVWAWGLNQFGQ 163

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + L P  I GL   V  ++ G  HS  +  D  ++ WG N  G+LG G  + 
Sbjct: 164 LGDGTTSQW-LTPRPIPGLSG-VRSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSR 221

Query: 163 KVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           + +P       + G+      A G   S+AV   G + +WG    G+LG G  S      
Sbjct: 222 RAVP-----RAIPGLRNVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFS------ 270

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
              +  TPR +  L G  V+  A  F HS  +   G V+ +G     +    +G  +R+ 
Sbjct: 271 ---NRATPRPVPGLSG--VRCVATSFFHSLALRAEGTVWAWGLNGYGEQ--GDGTASRQS 323

Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             P  +  L     V  G +H+  + + G +  WG N  G LG G+     +P  V
Sbjct: 324 PTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRSTPVTV 379



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 157/363 (43%), Gaps = 39/363 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G    G+L  R+ PV         + ++A GGAH+L +   G ++  G N +GQ
Sbjct: 56  WGASASGLREEGALSRRFAPVPVPGLSD--IVSVAAGGAHSLAVRADGTLWTWGGNPYGQ 113

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       +L P++++GL   V  ++TG  HS A+  DG ++ WG N  GQLG G  + 
Sbjct: 114 LGDGTTTARAL-PVQVAGLSG-VRAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQ 171

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P P  +  LSG+  +  A G   S+ V     V +WG+   G LG G  S       
Sbjct: 172 WLTPRP--IPGLSGV--RSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTS------- 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 PR I  L    V   A G  HS  +  +G +  +G  +  ++     ++   P 
Sbjct: 221 --RRAVPRAIPGLR--NVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPR 276

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V    +H+  L + G ++ WG N  G  G G+     SP       +  P
Sbjct: 277 PVPGLSGVRCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTAS-RQSP-------TPRP 328

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           V  + + ++ V+ G  H+ A++           ++GT S  GH+  GQLG G       P
Sbjct: 329 VPGL-SGVLSVATGTFHSLAVN-----------TNGTVSAWGHNGQGQLGDGTATHRSTP 376

Query: 403 TIV 405
             V
Sbjct: 377 VTV 379



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 24/247 (9%)

Query: 43  WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG   +G+LG G+  S+W   RP+   +     ++++A GG H+L + +   V+A G ND
Sbjct: 156 WGLNQFGQLGDGT-TSQWLTPRPIPGLS----GVRSVAAGGFHSLVVRDDDTVWAWGSND 210

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +G+LG       ++ P  I GL+  V  ++ G +HS A+  DG L  WG NS GQLG G 
Sbjct: 211 YGELGDGSTSRRAV-PRAIPGLRN-VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGT 268

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + +  P P  V  LSG+  +  A  F  S+A+   G V +WG  G G  G G  S    
Sbjct: 269 FSNRATPRP--VPGLSGV--RCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASR--- 321

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   TPR +  L GV     A G  HS  ++ NG V  +G     ++      H  
Sbjct: 322 -----QSPTPRPVPGLSGVLS--VATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRS 374

Query: 280 RPSLISK 286
            P  + K
Sbjct: 375 TPVTVLK 381



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 133/315 (42%), Gaps = 39/315 (12%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           S  PL  +G +   V +S G  HS A+  DG ++ WG +++G    G  + +  P+P  V
Sbjct: 22  SAPPLGRAG-EGPRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVP--V 78

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             LS I +   A G   S+AV   G + +WG    G+LG G          +T+   P  
Sbjct: 79  PGLSDIVS--VAAGGAHSLAVRADGTLWTWGGNPYGQLGDGT---------TTARALPVQ 127

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +  L GV+    A G  HS  +  +G V+ +G     ++     +    P  I  L    
Sbjct: 128 VAGLSGVRA--VATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSGVR 185

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
            V  GG+H+ V+     ++ WGSN+ G LG GS      P  + G            ++ 
Sbjct: 186 SVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSRRAVPRAIPG----------LRNVA 235

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            V+ G  H+ A+            + GT S  G +S GQLG G   +   P  V     V
Sbjct: 236 SVAGGCYHSLAVH-----------ADGTLSAWGLNSYGQLGDGTFSNRATPRPVPGLSGV 284

Query: 412 KALQVSCGFNHTGAL 426
           + +  S  F H+ AL
Sbjct: 285 RCVATS--FFHSLAL 297


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 16/343 (4%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
           V++ G N  G+LG   +    L P R+ GL K +V+ +S+G  HS  +T DG+L+M G N
Sbjct: 86  VWSFGQNTKGELGTG-HYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            + +LGL             VE L+ IF KQ A G   ++A++  G+V  WG     + G
Sbjct: 145 LHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRG 204

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              +       +  ++Y P L++   G K+K    G  HS  +D+NG +Y +G     + 
Sbjct: 205 DRSQER-----KDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGEC 259

Query: 271 ---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
               F++    +R         + ++  G +HT  +T+  ++Y WG    G  G G  + 
Sbjct: 260 GHGKFEDQETPQRIKFFDGKIIT-QIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFEN 318

Query: 328 LHSPERV----QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
              P+ V    QG  +    D +   I+           I+ G++ T     S   FS  
Sbjct: 319 TAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSF- 377

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G++  GQLGH    +Y  P +V    N K +QV+ G NH+  L
Sbjct: 378 GYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCL 420



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 150/347 (43%), Gaps = 43/347 (12%)

Query: 29  RWISSTLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           ++    +++  A +W  G    G LG G       P       K  +  L+ GG H+  +
Sbjct: 73  KYSLDQIKKYHAYVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLV 132

Query: 87  TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGEL 144
           TE G ++  G N   +LG+      S +  +   L  ++   Q++ G +H+ A++ +G++
Sbjct: 133 TEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQV 192

Query: 145 YMWG---KNSNGQLGLGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           Y+WG    N  G     +K  AK  P+   ++  +G   KQ   G   S+A+   G + S
Sbjct: 193 YVWGGSLHNKRGDRSQERKDNAKYKPVL--LQSFAGKKIKQIDCGDFHSLALDDNGTLYS 250

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  G  GHG         +   + TP+ IK  +G  +    AG  H+  I  + +VY
Sbjct: 251 WGVGEKGECGHG---------KFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVY 301

Query: 261 IFGDRAVDKMLFQEGNHARRPSLIS------------------------KLPYSEEVVCG 296
            +GD    +  F E  +   P L++                          P  +++  G
Sbjct: 302 AWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAG 361

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
             HT VLTS G+++++G N+ G LG  ++D    P+ V+G  +   V
Sbjct: 362 EMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTV 408



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 47/318 (14%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   + + G  S E    ++++PV+  +F    +K + CG  H+L L + G +Y+ G+
Sbjct: 194 VWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGV 253

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            + G+ G  +       P RI     K + QI  G HH+ AIT D ++Y WG    GQ G
Sbjct: 254 GEKGECGHGK-FEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCG 312

Query: 157 LGKKAAKVIP----IPTKVECLSGIFT----------------KQAALGFEQSVAVTGGG 196
            G+     IP     P++    S +                  KQ A G   ++ +T  G
Sbjct: 313 FGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSG 372

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           ++ S+G    G+LGH   +++  + R      P+L++ +   K    AAG  HS C+   
Sbjct: 373 QIFSFGYNQQGQLGH---NTVDNYCR------PKLVEGMLNHKTVQVAAGRNHSLCLTNK 423

Query: 257 GRVYIFGDRAV------DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
             VY  G+         D+ + +  +H    SL+S   +  ++  GG+H+ V+    E+ 
Sbjct: 424 NDVYACGNNQYGQCGLPDREMRKTFSHVL--SLLSVNSF--KLYAGGFHSWVVLD--EMM 477

Query: 311 TWGSNENGCLGIGSIDVL 328
                     G GS D L
Sbjct: 478 PKKDEFQALKGPGSDDSL 495



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 38/302 (12%)

Query: 145 YMW--GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           Y+W  G+N+ G+LG G      + +P +V  L  +     + G + S  VT  GK+   G
Sbjct: 85  YVWSFGQNTKGELGTGHYNE--VLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCG 142

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LG       L  + + S+ T + ++ L  + +K  A G  H+  + + G+VY++
Sbjct: 143 SNLHDKLG-------LEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVW 195

Query: 263 G----DRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G    ++  D+   ++ N   +P L+        +++ CG +H+  L   G LY+WG  E
Sbjct: 196 GGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGE 255

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGG 375
            G  G G  +   +P+R++  F +  +      I  +  G  HT AI+ + ++  WG  G
Sbjct: 256 KGECGHGKFEDQETPQRIK--FFDGKI------ITQIEAGNHHTLAITADNQVYAWG-DG 306

Query: 376 SHGT--FSEDGHSSGGQL----GHGNDVDYIHPTIVN-----FGENVKALQVSCGFNHTG 424
            +G   F E  +++  QL      GN+  Y+  ++       F +  K  Q++ G  HT 
Sbjct: 307 RYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTL 366

Query: 425 AL 426
            L
Sbjct: 367 VL 368


>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
           [Papio anubis]
          Length = 355

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            K    E   C   HT    T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
                   +P  I   +   V+IAA    H SA   + G VY++G 
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T D E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            LSG   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG +          + GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSAHTSA 299



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 148/327 (45%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 152/328 (46%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  + GL
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN-------SDTLG----PQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  VD 
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)

Query: 130  TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +G   +  +T D  ++ WG    G+LG G   +    +P K++ L+G+   +   G + S
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFS 4081

Query: 190  VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            VA+T  G V +WG G   RLGHG +  +           PR ++ L+G KV   A G LH
Sbjct: 4082 VALTKSGAVYTWGKGDYHRLGHGSDDHV---------RRPRQVQGLQGKKVIAIATGSLH 4132

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
              C  E+G VY +GD    ++     N  +RP L++ L   +   V CG  HT
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4185



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G  +    P+   +     +  + CG   ++ LT++G VY  G  D+ +
Sbjct: 4041 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4100

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG   +  +   P ++ GL+ K+V+ I+TG  H    T DGE+Y WG N  GQLG G   
Sbjct: 4101 LGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4159

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            A  I  P  V  L G    + A G   ++A
Sbjct: 4160 A--IQRPRLVAALQGKKINRVACGSAHTLA 4187



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 15/187 (8%)

Query: 67   AFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
            A + + +  +ACG   A TL LT+   V++ G  D+G+LG   + G  + P++I  L   
Sbjct: 4011 ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV-PMKIDSLTGL 4069

Query: 125  -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
             VV++  G   S A+T  G +Y WGK    +LG G      +  P +V+ L G      A
Sbjct: 4070 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH--VRRPRQVQGLQGKKVIAIA 4127

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
             G    V  T  G+V +WG    G+LG G  ++I           PRL+  L+G K+   
Sbjct: 4128 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI---------QRPRLVAALQGKKINRV 4178

Query: 244  AAGFLHS 250
            A G  H+
Sbjct: 4179 ACGSAHT 4185



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 136/330 (41%), Gaps = 61/330 (18%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
           P++  GL    + QI+        ++ +G +YM   NS+    QL  G  +  ++ I   
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLGPQLVQGLASRNIVKI--- 499

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                      A       +A+   G+V SWG G  GRLGHG    +           P+
Sbjct: 500 ----------AAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPK 540

Query: 231 LIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           +I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ 
Sbjct: 541 MISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG 600

Query: 287 LPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFS 339
           L   +  +V CG     T  +T  G++++WG  + G LG G  D   +P   E++Q    
Sbjct: 601 LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD--- 657

Query: 340 ESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +V V CG + + A++ +G++ +WG G +             +LGHG +  
Sbjct: 658 --------LDVVKVRCGSQFSVALTKDGQVYSWGKGDNQ------------RLGHGTEEH 697

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +P ++   +  K + V+ G  H  AL E
Sbjct: 698 VRYPKLLEGLQGKKVVDVAAGSTHCLALTE 727



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 116/289 (40%), Gaps = 61/289 (21%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +PT  E L+ +   Q   G +   AVT  GKV   
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPIQLIGGEQTLFAVTADGKV--- 4009

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
                                           + L+G +V   A  +G   + C+ ++  V
Sbjct: 4010 -------------------------------EALQGYRVIDIACGSGDAQTLCLTDDDTV 4038

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +GD    K+     +  + P  I  L      +V CG   +  LT  G +YTWG  + 
Sbjct: 4039 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4098

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGS 376
              LG GS D +  P +VQG   +         ++ ++ G  H    +E G++ TW     
Sbjct: 4099 HRLGHGSDDHVRRPRQVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW----- 4145

Query: 377  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                   G +  GQLG G       P +V   +  K  +V+CG  HT A
Sbjct: 4146 -------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRITKP-----EPTALPGLDTKHIVGIACGPAQSFA 776


>gi|350580248|ref|XP_003122992.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           isoform 1 [Sus scrofa]
          Length = 458

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 172/408 (42%), Gaps = 48/408 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E    P   S F K   +K +  GG H+  +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDG 79

Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+  +E++ Y    L  S L   + Q++ G+  +  +T +G++   G NS GQLG+  
Sbjct: 80  QLGLGHTEDVLYFT--LCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPH 137

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQESS 216
              + + +P  +E         AA G   ++A T  G V  WG G   SG RL  GQ   
Sbjct: 138 GPRRCV-VPQAIEVQREKVVSIAA-GLRHALAATASGLVFQWGTGLASSGRRLCPGQTLP 195

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +  FL +     P  +  LE  +     AG  HSA + + G +Y++G     ++  Q   
Sbjct: 196 L--FLTAKE---PSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAA- 249

Query: 277 HARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
               P  I    +  E V     G  H    T  G+++TWG  + G LG      L SPE
Sbjct: 250 FLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG----RTLESPE 305

Query: 333 -----------RVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISEGKILTWGWGGSHGTF 380
                          P    P    C T    VSCG +H  A+  G   +WGW       
Sbjct: 306 GWKPKKQASSLPCSRPARSVPSSLPCLTGATEVSCGSEHNLAVVGGTCYSWGW------- 358

Query: 381 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                +  G  G G + +   P  V    +   L++ CG  H+ AL +
Sbjct: 359 -----NEHGMCGDGTEANVWTPKPVQALRSSSGLRLGCGAGHSLALCQ 401



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 39/297 (13%)

Query: 92  VYATGLNDFGQLGI--SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMW 147
           ++A G N +GQLG+   E++   L P ++S   K   V +I+ G  HS+ +T  G L++ 
Sbjct: 17  LFAWGANSYGQLGLGHKEDV---LLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVC 73

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N +GQLGLG    + +   T  + L G   +Q A G++ ++ +T  G+VLS G+   G
Sbjct: 74  GLNKDGQLGLGH--TEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFG 131

Query: 208 RLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD- 264
           +LG  HG    ++          P+ I E++  KV   AAG  H+     +G V+ +G  
Sbjct: 132 QLGVPHGPRRCVV----------PQAI-EVQREKVVSIAAGLRHALAATASGLVFQWGTG 180

Query: 265 ------RAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNE 316
                 R            A+ PS ++ L  S+   V+ G  H+  LT  GELY WGSN+
Sbjct: 181 LASSGRRLCPGQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGSNK 240

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
           +G L       L  P++++    ++        +  V  GW H  A +E GK+ TWG
Sbjct: 241 HGQLA-SQAAFLPLPQKIEAHRFQN------EKVAAVWSGWTHLVAQTETGKVFTWG 290


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3195 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3239

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3240 --------RLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDTGQVY 3283

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 178/395 (45%), Gaps = 47/395 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGS-NENGCLGIGSIDVLHSP 331
             +  + P  I  L      +V CG   +  LT  G +YTW    +   LG GS D +  P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRP 4246

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
             +VQG   +         ++ ++ G  H    +E G++ TWG             +  GQ
Sbjct: 4247 RQVQGLQGKK--------VIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQ 4286

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            LG G       P +V   +  K  +V+CG  HT A
Sbjct: 4287 LGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4321



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 148/327 (45%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3309 GLEGQ--------KITRVACGSSHSVA 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 139/322 (43%), Gaps = 34/322 (10%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ IT  G+L+ WGK   G+LG G    ++ P    VE 
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-RAVDKMLFQEGNHARRPSLISKLPYS 290
            I  L G+ V     G   S  + ++G VY +   R   ++     +H RRP  +  L   
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGK 4255

Query: 291  E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQ 345
            +   +  G  H    T  GE+YTWG N+ G LG G+ + +  P  V   QG         
Sbjct: 4256 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--------- 4306

Query: 346  ICTSIVLVSCGWKHTAAISEGK 367
                I  V+CG  HT A S  K
Sbjct: 4307 --KKINRVACGSAHTLAWSTSK 4326



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 151/343 (44%), Gaps = 41/343 (11%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G +Y  G N  GQLG  E     + P     L     VQ+  G     A+T DG+LY  
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G  + G+  LG    + +  PT +E +  +F K+ A+  G +  +A++  G+V SWG   
Sbjct: 4015 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G  
Sbjct: 4073 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123

Query: 266  AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
               ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 322  IGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
             G  D    P +         +D +    +V V CG + + A+++ G + TW        
Sbjct: 4184 RGGSDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTW-------Q 4227

Query: 380  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
               D H    +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 VFRDYH----RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4266



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3178

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3179 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3220

Query: 423  TGAL 426
            + AL
Sbjct: 3221 SLAL 3224



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E +  P++ +  +   +  ++CG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  ++V++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 59/329 (17%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    VVQ++        ++ +G +Y    NS+  LG           P  V+ 
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSD-TLG-----------PQLVQS 490

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A++  G+V SWG G  GRLGHG    +           P++
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKM 541

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 542 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 601

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSE 340
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P   E++Q     
Sbjct: 602 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD---- 657

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                    IV V CG + + A++ +G++ TWG G +             +LGHG +   
Sbjct: 658 -------LDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ------------RLGHGTEEHV 698

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +P ++   +  K + V+ G  H  AL E
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTE 727



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 128/289 (44%), Gaps = 32/289 (11%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +PT  E L+ +   Q   G +   AVT  GK+ + 
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+          TP L++ ++ V +K  A  +G  H   +   G V
Sbjct: 4015 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+     +   RP +I  L   E  +V  GG H+  +T+ G+L+TWG    
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRY 4125

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
            G LG G  +    P+ V+       +D  C S      G   T  +++   + W WG   
Sbjct: 4126 GRLGHGDSEDQLKPKLVEALQGYRVIDIACGS------GDAQTLCLTDDDTV-WSWG--- 4175

Query: 378  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 4176 -----DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GLK K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741


>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 1419

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 108/360 (30%), Positives = 165/360 (45%), Gaps = 43/360 (11%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           +   WG+  YG+LG G+   R  PV      K    ++A GG H+L L +   V A G N
Sbjct: 521 YVMAWGSNTYGQLGDGTNIQRSTPVRVQGL-KGQASSVAAGGTHSLALLQDKSVAAWGNN 579

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           D GQLG       +     ++GL  ++V I+ G  HS A+  DG ++ WG NS+GQLG G
Sbjct: 580 DHGQLGDGSFTNRNTAA-TVNGLS-DIVGIAAGERHSLAVQSDGSVWAWGDNSSGQLGDG 637

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +  P+  KV+ LS + TK AA G + S+A+T  GKV +WG    G+LG G      
Sbjct: 638 TLKERSTPV--KVKGLSQV-TKIAA-GGDTSLAITADGKVWAWGNNQDGQLGDGT----- 688

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-- 276
               + ++ TP L+  L  V     + G+ H   +  +G V+ +GD +  + +   G+  
Sbjct: 689 ----TNNQSTPVLVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNS--QSILGTGSAD 740

Query: 277 -HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERV 334
            +   P+ +  L     +  G   +  +T+ G    WG N+   LG GS     S P ++
Sbjct: 741 AYCAVPTQVKGLSGVTAISAGNQFSLAMTNQGVAEAWGRNDFNQLGDGSAAKFESTPVQI 800

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           +       VDQ       +S G  H      G + T  W          G+++ GQLG G
Sbjct: 801 KNMPLVPVVDQS------ISAGGYHALC---GTLGTRSW----------GYNASGQLGLG 841



 Score =  107 bits (266), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 91/310 (29%), Positives = 141/310 (45%), Gaps = 29/310 (9%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           LQ +  A WGN D+G+LG GS  +R      +      +  +A G  H+L +   G V+A
Sbjct: 568 LQDKSVAAWGNNDHGQLGDGSFTNRNTAATVNGLS--DIVGIAAGERHSLAVQSDGSVWA 625

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG    +     P+++ GL  +V +I+ G   S AIT DG+++ WG N +GQ
Sbjct: 626 WGDNSSGQLG-DGTLKERSTPVKVKGL-SQVTKIAAGGDTSLAITADGKVWAWGNNQDGQ 683

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P+   V  LS + T   ++G+   +A+   G V +WG      LG G  
Sbjct: 684 LGDGTTNNQSTPV--LVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNSQSILGTGSA 739

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            +            P  +K L GV     +AG   S  +   G    +G    +++   +
Sbjct: 740 DAYCA--------VPTQVKGLSGVTA--ISAGNQFSLAMTNQGVAEAWGRNDFNQL--GD 787

Query: 275 GNHAR---RPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           G+ A+    P  I  +P      + +  GGYH    T G    +WG N +G LG+G  + 
Sbjct: 788 GSAAKFESTPVQIKNMPLVPVVDQSISAGGYHALCGTLGTR--SWGYNASGQLGLGITEH 845

Query: 328 LHSPERVQGP 337
           +  PE +  P
Sbjct: 846 ISIPEAISSP 855



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 93/324 (28%), Positives = 141/324 (43%), Gaps = 30/324 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG LG GS  +R  P    +     + A+A G ++ L L   G V+A G N  G 
Sbjct: 122 WGSNQYGELGDGSTTNRNSPAPVPSLS--GISAIATGYSYCLALKNDGTVWAWGSNQNGA 179

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P++ISGL   VV I+  YH S AI  DG ++ WG N  GQLG G    
Sbjct: 180 LGDGTTDDRK-TPVQISGLSG-VVSIAANYHSSYAIKSDGTVWAWGLNDQGQLGDGLSKD 237

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +PI T +  +  +       GF  +V    G     W  G           S+ G + 
Sbjct: 238 QWLPINTGLSNIKSLIPG----GFSLTVIKQDGS---LWQLG----------LSVNGSVS 280

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RP 281
           +  EYT   +  L    V  AAAG  +   I ++  V+ +G+       +   N    +P
Sbjct: 281 NDVEYTLVQVPGLS--HVVSAAAGQNNFMAILQDQTVWTWGNALPG---YGSMNTVTPQP 335

Query: 282 SLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
             +  L  +   V C G++   L + G ++ WG+N NG LG G+ D    P   Q    +
Sbjct: 336 VQVQGLSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDGTKDNHFVPS--QNFADK 393

Query: 341 SPVDQICTSIVLVSCGWKHTAAIS 364
           +P+     ++ LV+  +    AI+
Sbjct: 394 TPMAATVGNVSLVNTLYSEPYAIT 417



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 35/266 (13%)

Query: 128 ISTGYHHSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +S G  HS +    GE  M WG N+ GQLG G    +  P+  +V+ L G  +  AA G 
Sbjct: 508 VSAGDSHSLSA---GEYVMAWGSNTYGQLGDGTNIQRSTPV--RVQGLKGQASSVAA-GG 561

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+     V +WG    G+LG G       F    +  T   + ++ G+     AAG
Sbjct: 562 THSLALLQDKSVAAWGNNDHGQLGDGS------FTNRNTAATVNGLSDIVGI-----AAG 610

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             HS  +  +G V+ +GD +  ++          P  +  L    ++  GG  +  +T+ 
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKGLSQVTKIAAGGDTSLAITAD 670

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
           G+++ WG+N++G LG G+ +   +P  V G           + +  VS GW H  A+ S+
Sbjct: 671 GKVWAWGNNQDGQLGDGTTNNQSTPVLVPG----------LSDVTTVSVGWTHCLALKSD 720

Query: 366 GKILTWGWGGSH----GTFSEDGHSS 387
           G +  W WG +     GT S D + +
Sbjct: 721 GGV--WAWGDNSQSILGTGSADAYCA 744



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 45/310 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + A++   A+ L +   G V+  G    G      N   +L P++   L  +V+ IS G 
Sbjct: 51  ITAISANEAYALAMKSDGTVWGWGTGPLGNNDADSN--SALVPVQAKNLT-DVIAISAGG 107

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             + A+  DG ++ WG N  G+LG G    +  P P  V  LSGI     A G+   +A+
Sbjct: 108 DVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAP--VPSLSGI--SAIATGYSYCLAL 163

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V +WG+  +G LG G          +    TP  I  L GV V I AA +  S  
Sbjct: 164 KNDGTVWAWGSNQNGALGDGT---------TDDRKTPVQISGLSGV-VSI-AANYHSSYA 212

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS------EEVVCGGYHTCVLTSG 306
           I  +G V+ +G       L  +G      S    LP +      + ++ GG+   V+   
Sbjct: 213 IKSDGTVWAWG-------LNDQGQLGDGLSKDQWLPINTGLSNIKSLIPGGFSLTVIKQD 265

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG 366
           G L+  G + NG +   S DV ++  +V G           + +V  + G  +  AI + 
Sbjct: 266 GSLWQLGLSVNGSV---SNDVEYTLVQVPG----------LSHVVSAAAGQNNFMAILQD 312

Query: 367 KILTWGWGGS 376
           + + W WG +
Sbjct: 313 QTV-WTWGNA 321



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 39/251 (15%)

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           T Q  +    S +++ G  V++WG+   G+LG G          +    TP  ++ L+G 
Sbjct: 503 TFQGGVSAGDSHSLSAGEYVMAWGSNTYGQLGDGT---------NIQRSTPVRVQGLKGQ 553

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCG 296
              +AA G  HS  + ++  V  +G+   D     +G+   R   + ++ L     +  G
Sbjct: 554 ASSVAAGG-THSLALLQDKSVAAWGNN--DHGQLGDGSFTNRNTAATVNGLSDIVGIAAG 610

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
             H+  + S G ++ WG N +G LG G++    +P +V+G           + +  ++ G
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKG----------LSQVTKIAAG 660

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
              + AI+ +GK+  W W          G++  GQLG G   +   P +V    +V    
Sbjct: 661 GDTSLAITADGKV--WAW----------GNNQDGQLGDGTTNNQSTPVLVPGLSDVTT-- 706

Query: 416 VSCGFNHTGAL 426
           VS G+ H  AL
Sbjct: 707 VSVGWTHCLAL 717



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 39/237 (16%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           ++A+   G V  WG   +G LG+    S        S   P   K L  V + I+A G +
Sbjct: 61  ALAMKSDGTVWGWG---TGPLGNNDADS-------NSALVPVQAKNLTDV-IAISAGGDV 109

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             A +  +G V+ +G     ++      +   P+ +  L     +  G  +   L + G 
Sbjct: 110 ALA-LKNDGTVWSWGSNQYGELGDGSTTNRNSPAPVPSLSGISAIATGYSYCLALKNDGT 168

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGK 367
           ++ WGSN+NG LG G+ D   +P ++ G           + +V ++  +  + AI S+G 
Sbjct: 169 VWAWGSNQNGALGDGTTDDRKTPVQISG----------LSGVVSIAANYHSSYAIKSDGT 218

Query: 368 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 423
           +  W W          G +  GQLG G   D   P  +N G  N+K+L +  GF+ T
Sbjct: 219 V--WAW----------GLNDQGQLGDGLSKDQWLP--INTGLSNIKSL-IPGGFSLT 260


>gi|156356052|ref|XP_001623745.1| predicted protein [Nematostella vectensis]
 gi|156210473|gb|EDO31645.1| predicted protein [Nematostella vectensis]
          Length = 383

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 177/413 (42%), Gaps = 68/413 (16%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           F  L G   YG+L  G  +   +P V S + K  +  +  GG HT  +T++  +Y  G N
Sbjct: 3   FLNLKGANSYGQLACGHTDDVIKPAVHSNW-KDDVLCITGGGGHTAMITDSRELYTCGWN 61

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT--VDGELYMWGKNSNGQLG 156
           + GQLG+ + I   +E  R+  L   V  +S G++H+ AIT    G L ++G N+ GQLG
Sbjct: 62  NRGQLGLGDTIN-RIELHRV--LIPPVKHVSCGWNHTLAITGNYTGHLLVFGSNAFGQLG 118

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           +G+   +    PT  E   G      A G   SVAV             + + G     S
Sbjct: 119 IGRIGWQCT-TPTSCEVSPGSCVTDVAAGLRHSVAVL------------ATKYGVYFFES 165

Query: 217 ILGFLRSTSEYTPRLIK-------ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
              FL + S Y   ++K         EG + K  A G  H+  + + G VY +G      
Sbjct: 166 YSQFLLNVSTYLSHILKYRLLFVVSFEGCRGKSIAVGLHHTVLLTDAGAVYCWGSN---- 221

Query: 270 MLFQEGNHARRPSLISKLPYS------------EEVVCGGYHTCVLTSGGELYTWGSNEN 317
              Q G      SL+  +P               E+  G  H  V T  G +YTWG  + 
Sbjct: 222 ---QHGQCG--ASLLQSVPVPMRVRGPLNDACVREIHSGWSHVVVATDQGRVYTWGRADY 276

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAIS-EGKILTWGWGG 375
           G LG G        E  Q   S  P +  C   +  ++CG +H+ AIS +G++ TWGW  
Sbjct: 277 GQLGGGD-------ELQQNGHSAEPREVKCLRGVKQLACGAEHSIAISGDGQVRTWGW-- 327

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                     +  G  G G++ + + P +V+  +    + V CG  H+ A+++
Sbjct: 328 ----------NEHGMCGTGDESNVLSPVLVSAVQRSLVMLVGCGSGHSFAVVK 370



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 142/342 (41%), Gaps = 42/342 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKH-----SLKALACGGAHTLFLT--ETGCVYAT 95
           W N   G+LGLG   +R         E H      +K ++CG  HTL +T   TG +   
Sbjct: 60  WNN--RGQLGLGDTINR--------IELHRVLIPPVKHVSCGWNHTLAITGNYTGHLLVF 109

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGE-LYMWGKNSN 152
           G N FGQLGI   IG+         +     V  ++ G  HS A+      +Y +   S 
Sbjct: 110 GSNAFGQLGIGR-IGWQCTTPTSCEVSPGSCVTDVAAGLRHSVAVLATKYGVYFFESYSQ 168

Query: 153 GQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             L +    + ++      V    G   K  A+G   +V +T  G V  WG+   G+ G 
Sbjct: 169 FLLNVSTYLSHILKYRLLFVVSFEGCRGKSIAVGLHHTVLLTDAGAVYCWGSNQHGQCGA 228

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
               S+   +R         ++E+         +G+ H     + GRVY +G     ++ 
Sbjct: 229 SLLQSVPVPMRVRGPLNDACVREIH--------SGWSHVVVATDQGRVYTWGRADYGQLG 280

Query: 271 ---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
                Q+  H+  P  +  L   +++ CG  H+  ++  G++ TWG NE+G  G G    
Sbjct: 281 GGDELQQNGHSAEPREVKCLRGVKQLACGAEHSIAISGDGQVRTWGWNEHGMCGTG---- 336

Query: 328 LHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKIL 369
                 V  P   S V +  + ++LV CG  H+ A+ + +++
Sbjct: 337 --DESNVLSPVLVSAVQR--SLVMLVGCGSGHSFAVVKTRLM 374


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 62/368 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D GRLG+G+   +  PV  S     ++ +LA G  H+L ++  G V++ G N  GQ
Sbjct: 12  WGGNDDGRLGIGATGDQNLPVQLSYLS--NVVSLAGGEKHSLAVSGDGSVWSWGSNSAGQ 69

Query: 103 LGISENIGYSL---------------------------------EPLR----ISGLKKEV 125
           LG+      S+                                 +P +    +SG    V
Sbjct: 70  LGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAPGLSGCGNAV 129

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             ++ G   S  +  DG ++ WG N+   LGLG +  +    P KVE LS       A G
Sbjct: 130 PMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDR--NTPQKVEALSNAVA--LAAG 185

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
            + ++A+T  G V SWG   +G+LG G           T E TP+ ++ +  V   IAA 
Sbjct: 186 DDHTLALTRDGSVWSWGWNYNGQLGLGS------IHEDTYESTPKKVEAISNV-TAIAAQ 238

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
            + H+  +  +G V+ +G     ++   + N    P  +  L     +  GG H+  +T 
Sbjct: 239 TY-HTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAINAGGNHSLAVTR 297

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS- 364
            G+++ WG N  G LG+G +    +P++V+            +++V ++ G  HT A++ 
Sbjct: 298 DGQVWAWGENSEGQLGLGDLWDRDAPQKVEA----------LSNVVAINAGGDHTLALTR 347

Query: 365 EGKILTWG 372
           +G +  WG
Sbjct: 348 DGSVWAWG 355



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 16/254 (6%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST 130
           +++  LA G   +L L   G V++ G N +  LG+ + +  +  P ++  L    V ++ 
Sbjct: 127 NAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNT-PQKVEALSN-AVALAA 184

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQS 189
           G  H+ A+T DG ++ WG N NGQLGLG          P KVE +S + T  AA  +  +
Sbjct: 185 GDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNV-TAIAAQTY-HT 242

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G V SWG+   G+LG G ++             P+ ++ L  V V I A G  H
Sbjct: 243 QALTRDGNVWSWGSNDFGQLGMGDQND---------RDAPQKVEALSNV-VAINAGGN-H 291

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           S  +  +G+V+ +G+ +  ++   +      P  +  L     +  GG HT  LT  G +
Sbjct: 292 SLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVEALSNVVAINAGGDHTLALTRDGSV 351

Query: 310 YTWGSNENGCLGIG 323
           + WG N  G +G G
Sbjct: 352 WAWGKNGRGQIGTG 365



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 158/382 (41%), Gaps = 76/382 (19%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           + +T+ G ++  G ND G+LGI      +L P+++S L   VV ++ G  HS A++ DG 
Sbjct: 1   MAVTQGGALWTWGGNDDGRLGIGATGDQNL-PVQLSYLSN-VVSLAGGEKHSLAVSGDGS 58

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV-----------------------ECLSGIFTK 180
           ++ WG NS GQLG+       +  P                          +C    F  
Sbjct: 59  VWSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKT 118

Query: 181 QAAL------------GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
              L            G + S+ +   G V SWG      LG G               T
Sbjct: 119 APGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDR---------VDRNT 169

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLIS 285
           P+ ++ L        AAG  H+  +  +G V+ +G     ++      E  +   P  + 
Sbjct: 170 PQKVEALS--NAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVE 227

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
            +     +    YHT  LT  G +++WGSN+ G LG+G  +   +P++V+          
Sbjct: 228 AISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEA--------- 278

Query: 346 ICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
             +++V ++ G  H+ A++ +G++  W W          G +S GQLG G+  D   P  
Sbjct: 279 -LSNVVAINAGGNHSLAVTRDGQV--WAW----------GENSEGQLGLGDLWDRDAPQK 325

Query: 405 VNFGENVKALQVSCGFNHTGAL 426
           V    NV A  ++ G +HT AL
Sbjct: 326 VEALSNVVA--INAGGDHTLAL 345



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG L  R  P    A    ++ A+  GG HTL LT  G V+A G N  GQ
Sbjct: 304 WGENSEGQLGLGDLWDRDAPQKVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGRGQ 361

Query: 103 LGISENIGYSLEPLRI 118
           +G  E      EP+ +
Sbjct: 362 IGTGEGQSLYNEPVHV 377


>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
          Length = 345

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            K    E   C   HT    T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
                   +P  I   +   V+IAA    H SA   + G VY++G 
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T D E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            LSG   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG +          + GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSAHTSA 299



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G  ++   P          +  L+ G G H +  T  G VY  G N + QLG + 
Sbjct: 52  GCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
               SL P +IS   + K+V +++ G HHS  +T DGE+Y WG N++GQ+G G  A + I
Sbjct: 111 TTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAI 170

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P      CL        A G   S+AV   G+V  WG  G+G+LG G          S +
Sbjct: 171 PRRV-TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGN---------SGN 220

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
           + TP  I  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    P
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQL--GTGNRSNQSYPVP 278

Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
             + K    E   C   HT    T G ++Y WG
Sbjct: 279 ITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 147/329 (44%), Gaps = 28/329 (8%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L++TE   V+A G N  G LG+ +    S+E
Sbjct: 6   KWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQN-SVE 64

Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G     ++P      
Sbjct: 65  PRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            ++   T + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 LVNKKVT-EVACGSHHSMILTSDGEVYTWGYNNSGQVGSGS---------TANQAIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 K+ +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 175 TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+     S +    P +    D++   
Sbjct: 235 VQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGN----RSNQSYPVPITVDK-DRV--- 286

Query: 350 IVLVSCGWKHTAAISEGKILTWGWGGSHG 378
           I + +C   HT+A        + WG   G
Sbjct: 287 IEIAACHSAHTSAAKTQGSQVYMWGQCRG 315



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 33/242 (13%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
           VT   +V + G   SG LG G          + +   PR +  L G K+   + G   H 
Sbjct: 37  VTENNEVFALGTNCSGCLGVGD---------TQNSVEPRRLDTLCGKKITCLSYGSGPHV 87

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
                 G VY +G  A  ++     N++  P  IS    ++   EV CG +H+ +LTS G
Sbjct: 88  VVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDG 147

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-G 366
           E+YTWG N +G +G GS      P RV                V ++CG   + A+ E G
Sbjct: 148 EVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIA-------VNIACGQMCSMAVVENG 200

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           ++  WG+ G+            GQLG GN  +   P  +   + ++  +V+CG+ HT  L
Sbjct: 201 EVYVWGYNGN------------GQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248

Query: 427 LE 428
            +
Sbjct: 249 TD 250



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 127/299 (42%), Gaps = 47/299 (15%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
           +T + E++  G N +G LG+G     V P   +++ L G   K   L +      V  T 
Sbjct: 37  VTENNEVFALGTNCSGCLGVGDTQNSVEP--RRLDTLCG--KKITCLSYGSGPHVVVATA 92

Query: 195 GGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G+V +WG     +LG+G   +S+L    ST+         L   KV   A G  HS  +
Sbjct: 93  EGEVYTWGHNAYSQLGNGTTNNSLLPCQISTN---------LVNKKVTEVACGSHHSMIL 143

Query: 254 DENGRVYIFGDRAVDKM-LFQEGNHA--RRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
             +G VY +G     ++      N A  RR +   +   +  + CG   +  +   GE+Y
Sbjct: 144 TSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVY 203

Query: 311 TWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EG 366
            WG N NG LG+G+     +P R+   QG             +  V+CG+ HT  ++ EG
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRIAALQG-----------IRVQRVACGYAHTLVLTDEG 252

Query: 367 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           ++  WG             +S GQLG GN  +  +P  +   ++      +C   HT A
Sbjct: 253 QMYAWG------------ANSYGQLGTGNRSNQSYPVPITVDKDRVIEIAACHSAHTSA 299



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P+ I+  K  V++I+  +  H S+A T   ++YMWG+   GQ     
Sbjct: 264 QLGTGNRSNQSY-PVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             +  +P  T   C   +F
Sbjct: 317 --SITLPYLTHFACTDDVF 333


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 159/353 (45%), Gaps = 53/353 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  +   +P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 304 WGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 363

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  +V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 364 GLLGHGNDVSHWI-PKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHG 422

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            +  + +  P +VE LSG+ T  AA G   + AV              GK+ +WG G   
Sbjct: 423 DR--ENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 480

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G V+  G    
Sbjct: 481 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGS--- 528

Query: 268 DKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
             +  Q GN    P    KLP            EE+ CG YH  VLTS  E+YTWG   N
Sbjct: 529 -TVYGQLGN----PYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
           G LG G I+   +P  V     E+  D+    +  ++CG  +TAAI   K+++
Sbjct: 584 GRLGHGDIEDRKAPILV-----EALKDR---HVKYIACGANYTAAICLHKLVS 628



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 168/371 (45%), Gaps = 54/371 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G V+  G    G+LG  + +++   ++P  +  L    V  ++ G 
Sbjct: 285 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDV---IQPRLVESLAVSTVDFVACGE 341

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T+ GE+Y WG  ++  G LG G   +  IP   ++   L G+       G   +
Sbjct: 342 FHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIP--KRISGPLEGLQVASVTCGPWHT 399

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   ++           PR ++ L G++   AA G  H
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGDRENVA---------YPREVESLSGLRTIAAACGVWH 450

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCG 296
           +A + E           +G+++ +GD   +++   +     +P+ +  L  Y+  ++ CG
Sbjct: 451 TAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACG 510

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              T  LT+ G ++  GS   G LG    D    P  V+   S   V++I       +CG
Sbjct: 511 HSLTVGLTTSGHVFAMGSTVYGQLGNPYADG-KLPCLVEDKLSGESVEEI-------ACG 562

Query: 357 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A + S  ++ TWG G +            G+LGHG+  D   P +V   ++     
Sbjct: 563 AYHVAVLTSRNEVYTWGKGAN------------GRLGHGDIEDRKAPILVEALKDRHVKY 610

Query: 416 VSCGFNHTGAL 426
           ++CG N+T A+
Sbjct: 611 IACGANYTAAI 621



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 133/311 (42%), Gaps = 56/311 (18%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  ++G  K A  V     + +P  +E    +     A G   +  VT
Sbjct: 237 GDVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 296

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V +WG    GRLGHG    ++          PRL++ L    V   A G  H+  +
Sbjct: 297 RQGEVFTWGEESGGRLGHGVGKDVI---------QPRLVESLAVSTVDFVACGEFHTCAV 347

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   GN      P  IS  P        V CG +HT ++TS G
Sbjct: 348 TMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISG-PLEGLQVASVTCGPWHTALVTSTG 406

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-- 365
           +L+T+G    G LG G  + +  P  V+   S S +  I       +CG  HTAA+ E  
Sbjct: 407 QLFTFGDGTFGVLGHGDRENVAYPREVE---SLSGLRTIA-----AACGVWHTAAVVEVI 458

Query: 366 ----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
                     GK+ TWG G  +            +LGHG+    + PT V    +    +
Sbjct: 459 VTQSSSSISSGKLFTWGDGDKN------------RLGHGDKEPRLKPTCVPALIDYNFHK 506

Query: 416 VSCGFNHTGAL 426
           ++CG + T  L
Sbjct: 507 IACGHSLTVGL 517



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PR ++    + V   A G  H+A +   G V+ +G+ +  ++    G    +P L+  L 
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLA 330

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            S  + V CG +HTC +T  GE+YTWG  ++  G LG G+ DV H  P+R+ GP      
Sbjct: 331 VSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGN-DVSHWIPKRISGPLE---- 385

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 +  V+CG  HTA + S G++ T+G     GTF        G LGHG+  +  +P
Sbjct: 386 ---GLQVASVTCGPWHTALVTSTGQLFTFG----DGTF--------GVLGHGDRENVAYP 430

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V     ++ +  +CG  HT A++E +
Sbjct: 431 REVESLSGLRTIAAACGVWHTAAVVEVI 458


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P +IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------SSG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           +GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +   L+   V   A G +    + + G VY++G     ++
Sbjct: 187 G---------STVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
             P  V         D+I   I + +C   HT+A     G +  WG
Sbjct: 298 SYPTPV-----TMEKDRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG      +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTDEGQV 278

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 279 YAWG------------ANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSA 323



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 173/395 (43%), Gaps = 44/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL-ACGGAHTLF-LTETGCVYATGLND 99
            +WG+   G+L         +P+ C +     LK     GG  T+F +T  G VYA+G  +
Sbjct: 3548 VWGHNHRGQLACMDSSQVKKPLACDSLS--VLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 100  FGQLGI---SENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQL 155
             G+LGI   +    Y + P  + GL   + V +++G  H  A++  GE+Y WG   +G+L
Sbjct: 3606 SGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKL 3665

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            GLG +       P  V+ LS       A G   S A++  G + +WG G  GRLGHG   
Sbjct: 3666 GLGNRVTH--SKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYE 3723

Query: 216  SILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
              L          P+L++ L     VK+A  +G   + C+  +  V+ +GD    K+   
Sbjct: 3724 DYL---------YPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHN 3774

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                 + P  I  L      ++ CG   +  L++ G LYTWG  +   LG GS + +  P
Sbjct: 3775 ISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKP 3834

Query: 332  ERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
            + V G   +         IV  S G  H  A++ +G++  W            G +  GQ
Sbjct: 3835 KPVSGLQGK--------KIVQFSTGSLHVLALTDDGEVYAW------------GDNDEGQ 3874

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            LG G       P  +   +  +  QVSCG  H+ A
Sbjct: 3875 LGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 183/395 (46%), Gaps = 46/395 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFL-TETGCVYATGLND 99
            +WG  D G+LG  +     RP    A    +LK +   GG+ +LF+ +  G V+  G + 
Sbjct: 2597 VWGLNDKGQLGGLNGSKVKRPTFNEALT--ALKPIEIVGGSKSLFIVSNEGKVFVCGDSS 2654

Query: 100  FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             G+LGI    G    P +I GL + V++   + +G  H+ A+++DG++  WG   +G+LG
Sbjct: 2655 GGRLGIPF-CGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLG 2713

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G      +  P  ++ L        A G   S A+T  G++ +WG G  GRLGH  E  
Sbjct: 2714 HGD--ILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDE-- 2769

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
                    S++TP+L+KE  G  +   A G     +  +D  G VY +GD    K+    
Sbjct: 2770 -------VSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGG 2822

Query: 275  GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +    P  + +L      ++ CG   +  LT+ G+++TWG  E   LG+G        E
Sbjct: 2823 SDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGR------GE 2876

Query: 333  RVQGPFSESPVDQI-CTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 390
             V+ P   + V+Q+   +I  ++ G  H  A+S +G +  WG         ++ H   GQ
Sbjct: 2877 HVRRP---TLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWG---------DNDH---GQ 2921

Query: 391  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G+G       P +V    N+K  +V CG + + A
Sbjct: 2922 QGNGTTNANQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 26/279 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GD G+LGLG+  +  +P +  +     +  +ACGG H+  ++  G +Y  G   +G+
Sbjct: 3657 WGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGR 3716

Query: 103  LGISENIGYSLEPLRISGL-KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  +   Y L P  + GL    VV+++  +G   +  +T D  ++ WG    G+  LG 
Sbjct: 3717 LGHGDYEDY-LYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGK--LGH 3773

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P K+E LSG    Q   G + SVA++  G + +WG G   RLGHG    +  
Sbjct: 3774 NISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHV-- 3831

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   + G LH   + ++G VY +GD    ++     +   
Sbjct: 3832 -------RKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIA 3884

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
            RP  I+ L     ++V CG  H+         + W S E
Sbjct: 3885 RPRPIAALKGKRIQQVSCGSAHS---------FAWASEE 3914



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 161/356 (45%), Gaps = 66/356 (18%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            VY  GLND GQLG            +E +  +L+P+ I G  K +  +S           
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALT-ALKPIEIVGGSKSLFIVSN---------- 2643

Query: 141  DGELYMWGKNSNGQLGL---GKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
            +G++++ G +S G+LG+   GK ++     P ++  LS    K  A+  G + ++A++  
Sbjct: 2644 EGKVFVCGDSSGGRLGIPFCGKVSS-----PRQIPGLSQFVIKTVAVHSGGKHAMALSLD 2698

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKVLSWG G  G+LGHG    IL         TP+LI  L   +V   A G  HSA I  
Sbjct: 2699 GKVLSWGDGEDGKLGHG---DILTL------DTPKLIDSLLAKRVFYIACGSAHSAAITS 2749

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYT 311
            +G +Y +G     ++   +      P L+ +       +V CG     T  L S G +Y+
Sbjct: 2750 DGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYS 2809

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILT 370
            WG  + G LG G  D   +P++V+          +   +V + CG + + A++  G++ T
Sbjct: 2810 WGDGDFGKLGRGGSDGCCTPQKVER--------LVGHRVVQIECGAQFSVALTATGQVWT 2861

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            WG G  +            +LG G       PT+VN  + V    ++ G  H  A+
Sbjct: 2862 WGKGEYY------------RLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 80/278 (28%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N  GQL     +   +  P   + LS +   Q   G +   AVT  GKV + G 
Sbjct: 3546 VYVWGHNHRGQLACMDSSQ--VKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGY 3603

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              SGRLG G  +      ++    TP+L++ L  + +K+A                    
Sbjct: 3604 TESGRLGIGPYNP-----KNPYVVTPQLVQGLNNI-IKVA-------------------- 3637

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                                         V  GG H   L++ GE+Y WG  ++G LG+G
Sbjct: 3638 -----------------------------VNSGGRHCLALSTTGEVYAWGDGDDGKLGLG 3668

Query: 324  SIDVLHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  V HS P+ VQ    +  +D        ++CG  H+AAIS  G + TWG G       
Sbjct: 3669 N-RVTHSKPQLVQSLSDKCIID--------IACGGFHSAAISRYGHLYTWGKG------- 3712

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                   G+LGHG+  DY++P +V    N   ++V+CG
Sbjct: 3713 -----RYGRLGHGDYEDYLYPKLVQGLINYHVVKVACG 3745



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 128/300 (42%), Gaps = 40/300 (13%)

Query: 136  SAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            S I VD E  +Y+WG N  GQLG G   +KV   PT  E L+ +   +   G +    V+
Sbjct: 2585 SKIRVDSEYAVYVWGLNDKGQLG-GLNGSKV-KRPTFNEALTALKPIEIVGGSKSLFIVS 2642

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              GKV   G    GRLG       + F    S  +PR I  L    +K  A  +G  H+ 
Sbjct: 2643 NEGKVFVCGDSSGGRLG-------IPFCGKVS--SPRQIPGLSQFVIKTVAVHSGGKHAM 2693

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             +  +G+V  +GD    K+   +      P LI  L       + CG  H+  +TS GEL
Sbjct: 2694 ALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGEL 2753

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI---SEG 366
            YTWG  + G LG       H+P+ V+        + +  +I  V+CG +    +   SEG
Sbjct: 2754 YTWGQGQYGRLGHSDEVSQHTPKLVK--------EFVGKNITQVACGSRDAQTLALDSEG 2805

Query: 367  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             + +WG     G F        G+LG G       P  V      + +Q+ CG   + AL
Sbjct: 2806 NVYSWG----DGDF--------GKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVAL 2853



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 125/313 (39%), Gaps = 48/313 (15%)

Query: 34  TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           TLQR+   +    +  +          +  V    E+  ++++ C     L +T +G ++
Sbjct: 414 TLQRKVHEIKNKKNIVQYWGKQFYPETKKKVILTLERLHVESVVCSRNEILVVTTSGTLH 473

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI---STGYHHSS--AITVDGELYMWG 148
                          I YS++ L     +K+++ +   S   +  +  A+T  GE+Y WG
Sbjct: 474 F--------------ISYSIDSLNFE--EKQMMNVPMKSVDVYDETYLAVTQKGEVYSWG 517

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N  G LG G+K +   P P  +   S +     + G +   AVT  GK+  W     G+
Sbjct: 518 VNEFGALGHGQKYSS-FPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMW-----GK 571

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRA 266
           + H           S   YTP L+K +    V   + G    ++  +   G V+ F  R 
Sbjct: 572 ILHS----------SNCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSFEYRN 621

Query: 267 VDKMLFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D+     G   +  ++I S + +  E+V   C      V+     ++TWG   N  LG 
Sbjct: 622 SDR-----GCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGH 676

Query: 323 GSIDVLHSPERVQ 335
            +   ++ P+ V+
Sbjct: 677 NNSFRVNRPKEVK 689



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 48/243 (19%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           E  +AVT  G+V SWG    G LGHGQ+ S        S  TP  I     + V + + G
Sbjct: 502 ETYLAVTQKGEVYSWGVNEFGALGHGQKYS--------SFPTPEPIVAFSKLIVVMVSCG 553

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCV 302
               A + E+G++Y++G       +    N    P L+  +   +  +V CG    +T  
Sbjct: 554 KDFCAAVTEDGKLYMWGK------ILHSSNCCYTPELVKSISEWHVSKVSCGSSINNTLA 607

Query: 303 LTSGGELYT--WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
           L+  G +++  + +++ GC    S++V+  P  +   +           IV + C     
Sbjct: 608 LSREGYVFSFEYRNSDRGC-DDKSLNVI--PSMIVFDY----------EIVSIYCHNDVN 654

Query: 361 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVS 417
           A I     + TWG G ++             LGH N      P  V F  G+ V +L ++
Sbjct: 655 AVIDCANNVFTWGRGNNN------------MLGHNNSFRVNRPKEVKFLSGKQVTSLSLA 702

Query: 418 CGF 420
             +
Sbjct: 703 DDY 705



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 256  NGRV-YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTW 312
            NG+V Y++G     ++   + +  ++P     L   +   V GG  T   +TS G++Y  
Sbjct: 3542 NGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYAS 3601

Query: 313  GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI-----VLVSCGWKHTAAISE-G 366
            G  E+G LGIG       P   + P+  +P  Q+   +     V V+ G +H  A+S  G
Sbjct: 3602 GYTESGRLGIG-------PYNPKNPYVVTP--QLVQGLNNIIKVAVNSGGRHCLALSTTG 3652

Query: 367  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            ++  WG G              G+LG GN V +  P +V    +   + ++CG  H+ A+
Sbjct: 3653 EVYAWGDGD------------DGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAI 3700

Query: 427  LEY 429
              Y
Sbjct: 3701 SRY 3703


>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
 gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
          Length = 1224

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 27/312 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG  S  +R+ PV  S     +  A++ G  H+L L   G V+A G N +GQ
Sbjct: 763  WGYNGYGQLGDDSTTTRYSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNGYGQ 820

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG          P+++  L   VV I+ G   S A+  DG ++ WG+N+ G+LG G    
Sbjct: 821  LG-DGTTSSQRTPVQVKDLTG-VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTR 878

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              +P+  +V  L+ +  K  A G    VA+   G V +WG  G+G LG+   S+I     
Sbjct: 879  SSVPV--QVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGN--SSTI----- 927

Query: 223  STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
              S+ TP       GV  +K  AAG  H+  +  +G V+ +G     ++    GN+  R 
Sbjct: 928  --SQSTPVQ----SGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQL--GSGNNTSRS 979

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P+ I  L     +  G   +    + G LY+WG N NG LG G+    + P +V GP +
Sbjct: 980  VPAAIPGLASMASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKVIGP-N 1038

Query: 340  ESPVDQICTSIV 351
             +P D    + V
Sbjct: 1039 INPADTTAPAAV 1050



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 151/335 (45%), Gaps = 47/335 (14%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKKEVVQISTGY 132
           A++  G HT+F+   G V+  G N  GQLG   +   S+  + + ++G+K     I+ G 
Sbjct: 693 AVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMK----MIAGGE 748

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +H+ A+  DG L+ WG N  GQLG      +  P+  +V  L+      A  G   S+A+
Sbjct: 749 NHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSA--GENHSLAL 804

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V ++G  G G+LG G  SS         + TP  +K+L GV V IAA G   S  
Sbjct: 805 KSDGTVWAFGYNGYGQLGDGTTSS---------QRTPVQVKDLTGV-VAIAA-GKDFSLA 853

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G V+ +G     ++       +  P  ++ L   + +  G YH   L   G ++ W
Sbjct: 854 LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 913

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           G N NG LG  S              S+S PV    T I  ++ G  HT A+ S+G + +
Sbjct: 914 GYNGNGELGNSST------------ISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 961

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           WG+ G             GQLG GN+     P  +
Sbjct: 962 WGYNGY------------GQLGSGNNTSRSVPAAI 984



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 165/376 (43%), Gaps = 42/376 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+  S   P          +K +A G  HT+ L   G ++  G N +GQ
Sbjct: 713  WGYNGHGQLGTGTSNSTSVP--GKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQ 770

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG  ++      P+++S L      +S G +HS A+  DG ++ +G N  GQLG G  ++
Sbjct: 771  LG-DDSTTTRYSPVQVSTLTNWTA-VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSS 828

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V+ L+G+    A   F  S+A+   G V SWG    G LG+G  +      R
Sbjct: 829  QRTPV--QVKDLTGVVAIAAGKDF--SLALKSDGTVWSWGQNTYGELGNGTTT------R 878

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            S+      L+ +     VK  AAG  H   + ++G V+ +G    +  L      ++   
Sbjct: 879  SSVPVQVALLTD-----VKAIAAGDYHGVALKKDGSVFAWGYNG-NGELGNSSTISQSTP 932

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            + S +   + +  G YHT  L S G +++WG N  G LG G+      P  + G      
Sbjct: 933  VQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGSGNNTSRSVPAAIPG------ 986

Query: 343  VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                  S+  ++ G   + A     IL + W          G ++ GQLG+G  VD   P
Sbjct: 987  ----LASMASIAAGENQSIAYGNDGIL-YSW----------GRNANGQLGNGTTVDTNVP 1031

Query: 403  TIVNFGENVKALQVSC 418
              V  G N+     + 
Sbjct: 1032 HKV-IGPNINPADTTA 1046



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 101/258 (39%), Gaps = 34/258 (13%)

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G ++A   P+        G      +L    ++ +   G V  WG  G G+LG G     
Sbjct: 670 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGT---- 725

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S S   P  +  L G  +K+ A G  H+  +  +G ++ +G     ++       
Sbjct: 726 -----SNSTSVPGKVINLTG--MKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT 778

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +S L     V  G  H+  L S G ++ +G N  G LG G+     +P +V+  
Sbjct: 779 RYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKD- 837

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                     T +V ++ G   + A+ S+G +  W W          G ++ G+LG+G  
Sbjct: 838 ---------LTGVVAIAAGKDFSLALKSDGTV--WSW----------GQNTYGELGNGTT 876

Query: 397 VDYIHPTIVNFGENVKAL 414
                P  V    +VKA+
Sbjct: 877 TRSSVPVQVALLTDVKAI 894


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)

Query: 43  WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG G++G+LGL      +    P       +     +ACG +HTL LT +G VY+ G   
Sbjct: 4   WGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG LG       S   +  S     +VQI+ G +HS A+TV+G+L+ WG+   GQLG G 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               + P+P  V  LS     Q   G + ++A+   G++ SWG G  G+ GHG + +IL 
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                    P+L+  LE   +  A+AG  H+  +   G VY +GD    ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 96  GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
           G  +FGQLG+ +  G    PL R     +E+  V+++ G  H+ A+T  G++Y +G+ + 
Sbjct: 5   GCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G LG G   +   P+   V+ L G+   Q A G   S A+T  G++ SWG G  G+LG G
Sbjct: 65  GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              + L  +  T+  + RL+ ++          G  ++  ID +G+++ +G     +   
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173

Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
              ++   P L+  L      +   G  H   LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 29/232 (12%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           ++SWG G  G+LG    + +       +   PR ++    +     A G  H+  +  +G
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVF------TSPLPRFLRGSRELLFVRVACGSSHTLALTGSG 54

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
            VY FG      +          P ++  L      ++ CG  H+C LT  G+L++WG  
Sbjct: 55  DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRG 114

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG 374
           + G LG GS++    P  V      +  D++ T +V   CG  +T AI S+G++ +W   
Sbjct: 115 KYGQLGCGSVENHLQPVPV-----TALSDRLLTQVV---CGADYTMAIDSDGQLFSW--- 163

Query: 375 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    GH   GQ GHG   + + P +V   EN   +Q S G  H  AL
Sbjct: 164 ---------GHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVAL 206


>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
 gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 1 [Bos taurus]
          Length = 531

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 19/300 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G   S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              L P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            K    E   C   HT    T GG +Y WG      + +  +  L S + V   F+   V
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATPAV 341



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 36/318 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T   E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  L  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHI-MV 281

Query: 409 ENVKALQV-SCGFNHTGA 425
           E  + +++ +C   HT A
Sbjct: 282 EKERVIEIAACHSAHTSA 299



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSSCLGTGDNHSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           LG + N    L P  I   K+ V++I+  +  H S+A T  G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 27/312 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG  S  +R+ PV  S     +  A++ G  H+L L   G V+A G N +GQ
Sbjct: 703 WGYNGYGQLGDDSTTTRYSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNGYGQ 760

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P+++  L   VV I+ G   S A+  DG ++ WG+N+ G+LG G    
Sbjct: 761 LG-DGTTSSQRTPVQVKDLTG-VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTR 818

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+  +V  L+ +  K  A G    VA+   G V +WG  G+G LG+   S+I     
Sbjct: 819 SSVPV--QVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGN--SSTI----- 867

Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             S+ TP       GV  +K  AAG  H+  +  +G V+ +G     ++    GN+  R 
Sbjct: 868 --SQSTPVQ----SGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQL--GNGNNTSRS 919

Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P+ I  L     +  G   +    + G LY+WG N NG LG G+    + P +V GP +
Sbjct: 920 VPAAIPGLASIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKVIGP-N 978

Query: 340 ESPVDQICTSIV 351
            +P D    + V
Sbjct: 979 INPADTTAPAAV 990



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 152/335 (45%), Gaps = 47/335 (14%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKKEVVQISTGY 132
           A++  G HT+F+   G V+  G N  GQLG   +   S+  + + ++G+K     I+ G 
Sbjct: 633 AVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMK----MIAGGE 688

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +H+ A+  DG L+ WG N  GQLG      +  P+  +V  L+      A  G   S+A+
Sbjct: 689 NHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSA--GENHSLAL 744

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V ++G  G G+LG G  SS         + TP  +K+L GV V IAA G   S  
Sbjct: 745 KSDGTVWAFGYNGYGQLGDGTTSS---------QRTPVQVKDLTGV-VAIAA-GKDFSLA 793

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G V+ +G     ++       +  P  ++ L   + +  G YH   L   G ++ W
Sbjct: 794 LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 853

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           G N NG LG  S              S+S PV    T I  ++ G  HT A+ S+G + +
Sbjct: 854 GYNGNGELGNSST------------ISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 901

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           WG+ G             GQLG+GN+     P  +
Sbjct: 902 WGYNGY------------GQLGNGNNTSRSVPAAI 924



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 165/376 (43%), Gaps = 42/376 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+  S   P          +K +A G  HT+ L   G ++  G N +GQ
Sbjct: 653 WGYNGHGQLGTGTSNSTSVP--GKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQ 710

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  ++      P+++S L      +S G +HS A+  DG ++ +G N  GQLG G  ++
Sbjct: 711 LG-DDSTTTRYSPVQVSTLTNWTA-VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSS 768

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V+ L+G+    A   F  S+A+   G V SWG    G LG+G  +      R
Sbjct: 769 QRTPV--QVKDLTGVVAIAAGKDF--SLALKSDGTVWSWGQNTYGELGNGTTT------R 818

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S+      L+ +     VK  AAG  H   + ++G V+ +G    +  L      ++   
Sbjct: 819 SSVPVQVALLTD-----VKAIAAGDYHGVALKKDGSVFAWGYNG-NGELGNSSTISQSTP 872

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           + S +   + +  G YHT  L S G +++WG N  G LG G+      P  + G      
Sbjct: 873 VQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAIPG------ 926

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 SI  ++ G   + A     IL + W          G ++ GQLG+G  VD   P
Sbjct: 927 ----LASIASIAAGENQSIAYGNDGIL-YSW----------GRNANGQLGNGTTVDTNVP 971

Query: 403 TIVNFGENVKALQVSC 418
             V  G N+     + 
Sbjct: 972 HKV-IGPNINPADTTA 986



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 101/258 (39%), Gaps = 34/258 (13%)

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G ++A   P+        G      +L    ++ +   G V  WG  G G+LG G     
Sbjct: 610 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTG----- 664

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S S   P  +  L G  +K+ A G  H+  +  +G ++ +G     ++       
Sbjct: 665 ----TSNSTSVPGKVINLTG--MKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT 718

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +S L     V  G  H+  L S G ++ +G N  G LG G+     +P +V+  
Sbjct: 719 RYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKD- 777

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                     T +V ++ G   + A+ S+G +  W W          G ++ G+LG+G  
Sbjct: 778 ---------LTGVVAIAAGKDFSLALKSDGTV--WSW----------GQNTYGELGNGTT 816

Query: 397 VDYIHPTIVNFGENVKAL 414
                P  V    +VKA+
Sbjct: 817 TRSSVPVQVALLTDVKAI 834


>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Hydra magnipapillata]
          Length = 731

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 126/258 (48%), Gaps = 51/258 (19%)

Query: 43  WGNGDYGRLGLGSLESRWR----------PVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WG   Y +LG  +L+ +            P++ +      ++ + CG  HTLFL+  G V
Sbjct: 6   WGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNT--SFCIEKIICGWNHTLFLS-GGLV 62

Query: 93  YATGLN-------------------------DFGQLGISENIGYSLEPLRISGLKK-EVV 126
           YA+GLN                         +FGQ+GI+      + P  +  L    ++
Sbjct: 63  YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPII 122

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           QI  G HHS A+T+ G ++ WGKNS GQLGLG +  ++   PTK++ ++G   +  + G 
Sbjct: 123 QICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRL--FPTKIQSMNGKHVRYISCGE 180

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           E SV +T  G+V ++G G SG+LGH +            ++ P+++ +L G  V   A G
Sbjct: 181 EHSVLLTSAGRVYTFGCGSSGQLGHNE---------FEDQFIPKMVVDLMGTPVTQIACG 231

Query: 247 FLHS-ACIDENGRVYIFG 263
             H+ A + +  ++Y FG
Sbjct: 232 RKHTLAHVMKGNKLYSFG 249



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGLG  + R  P    +     ++ ++CG  H++ LT  G VY  G    GQ
Sbjct: 143 WGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSGQ 202

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKA 161
           LG +E     +  + +  +   V QI+ G  H+ A  + G +LY +G N  GQLG+G   
Sbjct: 203 LGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKGQLGIGSYE 262

Query: 162 AKVIPIPT 169
              IP+ T
Sbjct: 263 KARIPMLT 270



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 48/251 (19%)

Query: 144 LYMWGKNSNGQLGLGKKAAK--------VIPIPT---------KVEC-------LSGIFT 179
           +Y WG N+  QLG      K          P P          K+ C       LSG   
Sbjct: 3   MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGGLV 62

Query: 180 KQAALGFEQSVAVTG------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
             + L ++  + ++        G V SWG+   G++G   +     F +  S   P+L++
Sbjct: 63  YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSK-----FHKYVS---PQLVR 114

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSE 291
           +L    +    AG  HS  +  +G ++ +G  +  ++   +      P+ I  +   +  
Sbjct: 115 DLSNCPIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVR 174

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
            + CG  H+ +LTS G +YT+G   +G LG    +    P+ V        VD + T + 
Sbjct: 175 YISCGEEHSVLLTSAGRVYTFGCGSSGQLGHNEFEDQFIPKMV--------VDLMGTPVT 226

Query: 352 LVSCGWKHTAA 362
            ++CG KHT A
Sbjct: 227 QIACGRKHTLA 237



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 23/148 (15%)

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P L+  L      ++  GG+H+  LT  G ++ WG N  G LG+G       P ++Q   
Sbjct: 110 PQLVRDLSNCPIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMN 169

Query: 339 SESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
            +         +  +SCG +H+  + S G++ T+G G            S GQLGH    
Sbjct: 170 GK--------HVRYISCGEEHSVLLTSAGRVYTFGCG------------SSGQLGHNEFE 209

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGA 425
           D   P +V         Q++CG  HT A
Sbjct: 210 DQFIPKMVVDLMGTPVTQIACGRKHTLA 237



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 71/177 (40%), Gaps = 46/177 (25%)

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSG------------------------GELYT 311
           N    P L++     E+++CG  HT  L+ G                        G +++
Sbjct: 30  NTFPTPILVNTSFCIEKIICGWNHTLFLSGGLVYASGLNYDGELGISNENTEVPDGHVFS 89

Query: 312 WGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKIL 369
           WGSNE G +GI S      SP+ V+   S  P+ QIC        G  H+ A++  G I 
Sbjct: 90  WGSNEFGQVGINSKFHKYVSPQLVRD-LSNCPIIQICA-------GGHHSLALTISGTIF 141

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            W            G +S GQLG G+  D + PT +          +SCG  H+  L
Sbjct: 142 AW------------GKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLL 186



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKI 368
           +Y+WG N    LG  ++      E +   F    +      I  + CGW HT  +S G +
Sbjct: 3   MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGGLV 62

Query: 369 LTWG--WGGSHGTFSE-----DGH------SSGGQLGHGNDV-DYIHPTIVNFGENVKAL 414
              G  + G  G  +E     DGH      +  GQ+G  +    Y+ P +V    N   +
Sbjct: 63  YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPII 122

Query: 415 QVSCGFNHTGAL 426
           Q+  G +H+ AL
Sbjct: 123 QICAGGHHSLAL 134


>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
           partial [Apis florea]
          Length = 647

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 176/379 (46%), Gaps = 45/379 (11%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   V S F   +  + +++CG  H+  + ++G ++  G ND+GQLG+      S +P
Sbjct: 10  SRFADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHIS-KP 68

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
             +  LK E V  ++ G  H+   TV  +++  G +  GQLG G  A   +  IP+    
Sbjct: 69  SCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASIPVLVYD 128

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
              +G    Q   G   S+A+T  G V +WG+   G+LG    S ++   + T  + P  
Sbjct: 129 SGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVN--KPTKVHIPEP 186

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K++          G+ HS  + ENG VY+ G+    K+        +      +LP   
Sbjct: 187 VKQIN--------TGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPV 238

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQICT 348
             V CGG+HT +LT    LY  GSN +G LG+G+ +  LH P+ + +G      +  I  
Sbjct: 239 IHVACGGHHTVILTEKDNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHI-- 296

Query: 349 SIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
                SCG  HTA ++E GK+ T G  G H           G+LG   + + +H   + F
Sbjct: 297 -----SCGESHTAILTESGKLYTCG-DGRH-----------GKLGLEENENNVHE--LTF 337

Query: 408 GENVKAL---QVSCGFNHT 423
            +  K L    +SCG  HT
Sbjct: 338 VQRYKELFISNISCGGCHT 356



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 143/314 (45%), Gaps = 36/314 (11%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +  V+ IS G  HS+ I   G L+++G N  GQLGLG K    I  P+ V+ L       
Sbjct: 24  RDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNH--ISKPSCVKVLKPEKVTH 81

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVK 239
            A G   ++  T   K+ + G+   G+LG G   S +G     S   P L+ +    G K
Sbjct: 82  VACGRAHTLICTVAEKIFACGSDQEGQLGRG--ISAIG----DSASIPVLVYDSGPTGSK 135

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY 298
           +    AG  HS  +  +G V+ +G     ++ L        +P+ +      +++  G Y
Sbjct: 136 IVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKQINTGYY 195

Query: 299 HTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
           H+  LT  G +Y  G +E+G LGI  +      P+++Q P   SPV       + V+CG 
Sbjct: 196 HSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLP---SPV-------IHVACGG 245

Query: 358 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG--ENVKAL 414
            HT  ++E   L              G +S GQLG G +V  +H P ++  G  +N K  
Sbjct: 246 HHTVILTEKDNLYCT-----------GSNSSGQLGLGTNVTELHIPKLLPRGALKNEKIS 294

Query: 415 QVSCGFNHTGALLE 428
            +SCG +HT  L E
Sbjct: 295 HISCGESHTAILTE 308


>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
          Length = 531

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 19/300 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G   S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              L P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            K    E   C   HT    T GG +Y WG      + +  +  L S + V   F+   V
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATPAV 341



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 36/318 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T   E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  L  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHI-MV 281

Query: 409 ENVKALQV-SCGFNHTGA 425
           E  + +++ +C   HT A
Sbjct: 282 EKERVIEIAACHSAHTSA 299



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           LG + N    L P  I   K+ V++I+  +  H S+A T  G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSSCLGTGDNHSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 38/296 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYATGLN 98
           WG  + G LGLG+ ++   P    A +   + ++ACGG     H+  +TE G VY  G  
Sbjct: 3   WGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSG 62

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             GQLG  ++    L  L +      +V+++ G  H+  ++  G ++ WG    GQLG+G
Sbjct: 63  KSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVG 122

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                  P+  +V  L G+   + A G   +  VT  G V +WG G +G+LGHG ++   
Sbjct: 123 STHNSNDPV--QVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDA--- 177

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE---- 274
                 S+  P  +K+L G+ V   A G  H+  + E        DRAV    + E    
Sbjct: 178 ------SQSRPMYVKKLHGIYVSTLACGLAHTVVVSEV-------DRAVFSWGWDEYGQL 224

Query: 275 ---------GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                    GN  R P  I  L   +++ CG  +T  L+S G++Y +G  ++G LG
Sbjct: 225 GHGGWDIFGGNKNRSPRPIKDL---QQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 132/294 (44%), Gaps = 47/294 (15%)

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG----FEQSVAVTGGGKVLS 200
           + WG N++G LGLG   A   P P  +  L G+     A G     + S AVT  G+V +
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCP--IIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG+G SG+LGHG   +++          PRLI  L+   +   A G  H+  + + G V+
Sbjct: 59  WGSGKSGQLGHGDSQNLV---------LPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVF 109

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +G     ++     +++  P  ++ L   +  +V CG  HT V+T  G +YTWG   NG
Sbjct: 110 AWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNG 169

Query: 319 CLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWGW 373
            LG G       P   +++ G +           +  ++CG  HT  +SE    + +WGW
Sbjct: 170 QLGHGDDASQSRPMYVKKLHGIY-----------VSTLACGLAHTVVVSEVDRAVFSWGW 218

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCGFNHTGAL 426
                          GQLGHG   D            +K L Q++CG ++T AL
Sbjct: 219 ------------DEYGQLGHGG-WDIFGGNKNRSPRPIKDLQQIACGSSYTLAL 259



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 36/237 (15%)

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG----FLHSACID 254
            SWG    G LG G   ++          +P  I  L+G+ V   A G      HSA + 
Sbjct: 1   FSWGFNNDGALGLGTTDAV---------GSPCPIIALQGLLVVSVACGGGSEEQHSAAVT 51

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
           E G+VY +G     ++   +  +   P LI  L  +   EV CG  HT V++  G ++ W
Sbjct: 52  EQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAW 111

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTW 371
           G    G LG+GS    + P +V      + +D +   +  V+CG  HTA ++E G + TW
Sbjct: 112 GWGHFGQLGVGSTHNSNDPVQV------TSLDGV--KVCKVACGSAHTAVVTESGHVYTW 163

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           GWG              GQLGHG+D     P  V     +    ++CG  HT  + E
Sbjct: 164 GWG------------VNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSE 208


>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
           guttata]
          Length = 537

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     + +L+ G G H +  TE G VYA G N + QLG  + N
Sbjct: 60  LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 119

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+++DG+LY WG N+ GQ+G G  A +  P P
Sbjct: 120 QGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQ--PTP 177

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            +V  CL G      A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 178 RRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP  +  L  V V   A G+ H+  + + G +Y +G     ++    GN + + S +  +
Sbjct: 229 TPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQIM 286

Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
              E VV    C   HT    T  G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 123/239 (51%), Gaps = 16/239 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L+  G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCG 164

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P R+S     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   P +V  L  +   Q A G+  ++A+T  G + +WGA   G+LG G +S+ L 
Sbjct: 224 NGNQL--TPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGDRAVDKMLFQEGNH 277
            +        +++ E E V V+IAA    H SA   ++G+VY++G      + F    H
Sbjct: 282 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFPHLTH 331



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 38/319 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  IT   E++++G N +  LG G   + +  +P K+E
Sbjct: 19  LSPQEIASIRKACV-FGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 75

Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
            L G   K ++L +      V  T  G+V +WG  G  +LG+G  +  +  ++     T 
Sbjct: 76  ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 130

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
            LIK     KV   A G  HS  +  +G +Y +G     ++      +   P  +S    
Sbjct: 131 LLIK-----KVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ 185

Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
            + VV   CG   +  + + GE+Y WG N NG LG+G+     +P RV      + +  +
Sbjct: 186 GKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRV------AALHSV 239

Query: 347 CTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 406
           C  ++ ++CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  + 
Sbjct: 240 C--VLQIACGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPVQIM 286

Query: 407 FGENVKALQVSCGFNHTGA 425
             +       +C   HT A
Sbjct: 287 MEKERVVEIAACHSAHTSA 305



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 39/249 (15%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ +T   +V  +G   S  LG G   S +          P+ ++ L G K+   + G 
Sbjct: 39  EAIYITHSDEVFVFGLNCSNCLGTGDNQSTI---------VPKKLEALCGKKISSLSYGS 89

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYHT 300
             H     E+G VY +G     ++     N    P       LI K+    EV CG +H+
Sbjct: 90  GPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVV---EVACGSHHS 146

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT 360
             L+  G+LY WG N  G +G GS     +P RV        V       V ++CG   +
Sbjct: 147 MALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIV-------VGIACGQTSS 199

Query: 361 -AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
            A ++ G++  WG+ G+            GQLG GN+ + + P  V    +V  LQ++CG
Sbjct: 200 MAVVNNGEVYGWGYNGN------------GQLGLGNNGNQLTPCRVAALHSVCVLQIACG 247

Query: 420 FNHTGALLE 428
           + HT AL +
Sbjct: 248 YAHTLALTD 256


>gi|302760337|ref|XP_002963591.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
 gi|300168859|gb|EFJ35462.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
          Length = 420

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 196/442 (44%), Gaps = 70/442 (15%)

Query: 24  LGICKRWISSTLQRRF--AALWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALA 77
           +G+ +R   + L R F  AA++  GD     LG   S     + P         S+  +A
Sbjct: 2   IGLARR--RNVLGRAFHTAAVYSFGDGSNGALGHPHSFTNDSFEPAAVPGLPP-SIARVA 58

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH 134
           CG  H+L L+ +G ++A G N+ GQLG  E       ++ P R+ G++   V+ + G   
Sbjct: 59  CGHYHSLALSRSGELWAWGRNNEGQLGRGEKSILSAATITPQRVRGMESTRVRAAAGSGV 118

Query: 135 -SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            S AI  DG L+ WG +  GQLGLG      + +P K+  L+G    Q +LG+  ++A T
Sbjct: 119 VSMAICEDGSLWSWGSSKRGQLGLGLGVTSSL-LPQKIHALAGKSVLQVSLGWGHALACT 177

Query: 194 GGGKVLSWGAGGSGRLG-------------------HGQ--ESSILGFLRSTS----EYT 228
             G++ SWG   SGRLG                   H    E  ++  LR       ++ 
Sbjct: 178 MDGELFSWGYHDSGRLGYLLPQDQTLMIQPSKDSLDHNDVGEKMLMEQLRKEDAPILQWE 237

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+L+K  E  K+   A G  HS  + E+G ++ FGD +  ++  +    +   S +    
Sbjct: 238 PKLVKLPEPSKIVQVACGLDHSLALSESGLLFSFGDNSTAQLGRETTEDSPIISRVGGDL 297

Query: 289 YSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPV 343
             ++VV      G+   V       YTWG +    LG              GP S    +
Sbjct: 298 EGKQVVAIGAGWGHSLAVERCSRAAYTWGWSSGSQLG------------RSGPSSVPKQL 345

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
           +++   +V V+ G  H+ A+ S+ ++ TWG G              G+LG G+  D   P
Sbjct: 346 EELDDPVVSVAGGRVHSLALTSKHQVWTWGCG------------RNGRLGLGSSRDENLP 393

Query: 403 TIV-NFGENVKALQVSCGFNHT 423
            +V +  E+ + + V CG++H+
Sbjct: 394 VLVESLEEHAEVIDVCCGYDHS 415


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 152/342 (44%), Gaps = 38/342 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG GS E    P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 101 WGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG  +++ + + P RI+G  +   V  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 161 GLLGHGKDVSHWI-PKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            + +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V   G+  V
Sbjct: 278 RLGHGDKEPRL---------KPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGN-TV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              L    +  + P L+ ++      +V CG YH  VLT   E++TWG   NG LG G I
Sbjct: 328 YGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDI 387

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK 367
           +    P  V+             S+  ++CG   TAAI + K
Sbjct: 388 EDRKIPTLVEALRDR--------SVRHIACGANFTAAICQHK 421



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 166/373 (44%), Gaps = 53/373 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STGYHH 134
           + CG  H+  +T+ G V+  G    G+LG       S+ P  I  L    V I + G  H
Sbjct: 82  VDCGVKHSALVTKNGEVFTWGEESGGRLGHGSRED-SIHPRLIESLAVCNVDIVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG GK  +  IP       L G+     + G   +  +
Sbjct: 141 TCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIP-KRIAGALEGLAVAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           P+ ++ L G+K    A G  H+A 
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESI---------SCPKEVESLSGLKTISVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E           +G+++ +GD   DK     G+   R  P+ ++ L   +   + CG 
Sbjct: 251 IVEVIVTQSSSSISSGKLFTWGDG--DKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             T  LT+ G++ + G+   G LG        +P R  G       + +  ++V V+CG 
Sbjct: 309 SLTVGLTTSGKVLSMGNTVYGQLG--------NP-RSDGKIPCLVEEIVGENVVQVACGS 359

Query: 358 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H A ++ + ++ TWG G +            G+LGHG+  D   PT+V    +     +
Sbjct: 360 YHVAVLTIKSEVFTWGKGAN------------GRLGHGDIEDRKIPTLVEALRDRSVRHI 407

Query: 417 SCGFNHTGALLEY 429
           +CG N T A+ ++
Sbjct: 408 ACGANFTAAICQH 420



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 104/220 (47%), Gaps = 29/220 (13%)

Query: 220 FLRSTSEYTPRLIKELEGVKVKIA---AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST        K LE   V  A     G  HSA + +NG V+ +G+ +  ++      
Sbjct: 56  VVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P LI  L     + V CG +HTC +T+ GELYTWG  ++  G LG G  DV H  P
Sbjct: 116 DSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGK-DVSHWIP 174

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 390
           +R+ G            ++  VSCG  HTA I+  G++ T+G     GTF        G 
Sbjct: 175 KRIAGALEG-------LAVAYVSCGTWHTALITTMGQLFTFG----DGTF--------GV 215

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 216 LGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVI 255


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 177/394 (44%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3967 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4024

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4025 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4082

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4083 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4137

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G  V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4138 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4251

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4252 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4291

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4292 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4325



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2969 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3028

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3029 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3087

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3088 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3139 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3198

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3199 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3243

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3244 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3282



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3007 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3066

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3067 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3124

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3125 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3175

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3176 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3235

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3236 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3287

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3288 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3079 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3139 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3196

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3197 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3253

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3254 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3302

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3303 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3334



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3025 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3085 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3143

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3144 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3197

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3198 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3252

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3253 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3312

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3313 GLEGQ--------KITRVACGSSHSVA 3331



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2961 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3018

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3070

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3071 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3130

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3131 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3182

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3183 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3224

Query: 423  TGAL 426
            + AL
Sbjct: 3225 SLAL 3228



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 135/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3962 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4020

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4021 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4080

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4081 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4131

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L   +  +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4132 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4192 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4237

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4238 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4270



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    PV+ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3960 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4010

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4011 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4070

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4071 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4122

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +    + V+CG
Sbjct: 4123 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACG 4161


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 136/300 (45%), Gaps = 19/300 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            K    E   C   HT    T GG +Y WG      + +  +    S + V   F+   V
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFATPAV 341



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSAHTSA 299



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVSIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 155/345 (44%), Gaps = 38/345 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG GS E    P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 116 WGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNI 175

Query: 101 GQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG    ++V  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 176 GLLGHGTDLSHWI-PKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHG 234

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            + +  IP P +VE LSG+ T   A G   + AV              GK+ +WG G   
Sbjct: 235 NRES--IPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKH 292

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +              P  +  L        A G   +  +  +G+V+  G+  V
Sbjct: 293 RLGHGDKEP---------RVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGN-TV 342

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              L    +  + P L+  +      +V CG YH  VLT   E++TWG   NG LG G I
Sbjct: 343 YGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDI 402

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
           +    P  V     E   D+    +  ++CG   TAAI + K ++
Sbjct: 403 EDRKIPTLV-----EVLRDR---GVRHIACGANFTAAICQRKWMS 439



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 164/373 (43%), Gaps = 55/373 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           + CG  H   +T+ G V+  G    G+LG      Y + P  +  L    V  ++ G  H
Sbjct: 97  VDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDY-IHPSLVESLAVSNVDFVACGEFH 155

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G   +    IP ++   L G      + G   +  
Sbjct: 156 TCAVTTAGELYTWGDGTHNIGLLGHGTDLSHW--IPKRISGALEGQQVAYVSCGTWHTAL 213

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A
Sbjct: 214 ITSTGQLFTFGDGTFGVLGHGNRESI---------PCPREVESLSGLKTIAVACGVWHTA 264

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
            + E           +G+++ +GD   DK     G+   R  P+ ++ L  Y    + CG
Sbjct: 265 AVVEVIVTQSSSSISSGKLFTWGDG--DKHRLGHGDKEPRVKPTCVASLIDYDFHRIACG 322

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              T  LT+ G+++  G+   G LG        +P R  G       D +  ++V V+CG
Sbjct: 323 HSLTVGLTTSGQVWGMGNTVYGQLG--------NP-RSDGKLPCLVEDIMGENVVQVACG 373

Query: 357 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H A ++ + ++ TWG G +            G+LGHG+  D   PT+V    +     
Sbjct: 374 SYHVAVLTVKSEVFTWGKGAN------------GRLGHGDIEDRKIPTLVEVLRDRGVRH 421

Query: 416 VSCGFNHTGALLE 428
           ++CG N T A+ +
Sbjct: 422 IACGANFTAAICQ 434



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 107/221 (48%), Gaps = 29/221 (13%)

Query: 219 GFLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
             +RST  +   L K LE    + V     G  H+A + +NG V+ +G+ +  ++     
Sbjct: 70  AVIRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSR 129

Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-S 330
                PSL+  L  S  + V CG +HTC +T+ GELYTWG  ++  G LG G+ D+ H  
Sbjct: 130 EDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGT-DLSHWI 188

Query: 331 PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 389
           P+R+ G             +  VSCG  HTA I S G++ T+G     GTF        G
Sbjct: 189 PKRISGALEGQ-------QVAYVSCGTWHTALITSTGQLFTFG----DGTF--------G 229

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
            LGHGN      P  V     +K + V+CG  HT A++E +
Sbjct: 230 VLGHGNRESIPCPREVESLSGLKTIAVACGVWHTAAVVEVI 270


>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
 gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 444

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 136/286 (47%), Gaps = 17/286 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+      PV  +      +KA+A G   +L L   G V+A G N +GQ
Sbjct: 95  WGSNKYGQLGDGTYNDSAGPVQVAGLT--GVKAIAAGKDISLALKGDGTVWAWGSNSYGQ 152

Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +G  S N   +  P+++ GL   +  IS G  H  A   DG ++ WG N +G LG G   
Sbjct: 153 VGEGSLNYKGTAVPIQVKGLN-NIQAISAGGSHCLASQGDGAVWAWGDNRHGVLGDGTNE 211

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES----SI 217
           ++  P+ +K+  + G+    A      ++AV   G V SWG   +G+LG G  S      
Sbjct: 212 SRFTPVRSKIYNVMGLDAGDA-----HALAVMVDGNVWSWGYNYNGQLGMGGTSLNDLGR 266

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
           L F      + P +++ L GVK    A G  HS  + +NG V+ +G  +  ++   +  G
Sbjct: 267 LSFGPEADSFNPDIVRGLSGVKS--VAVGASHSVALADNGTVWTWGSNSDGQLGVGKTGG 324

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +    P  +S +     V  G YHT  L   G ++ WGSN  G +G
Sbjct: 325 SDMTVPVRVSGINGITAVDAGLYHTLALKDDGSVWAWGSNAEGQVG 370



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 137/310 (44%), Gaps = 20/310 (6%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
            E   ++ +A G  H L L   G V+A G N +GQLG       S  P++++GL   V  
Sbjct: 68  VEISVVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLG-DGTYNDSAGPVQVAGLTG-VKA 125

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           I+ G   S A+  DG ++ WG NS GQ+G G    K   +P +V+ L+ I  +  + G  
Sbjct: 126 IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNI--QAISAGGS 183

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
             +A  G G V +WG    G LG G   S    +RS   Y    +   +   + +   G 
Sbjct: 184 HCLASQGDGAVWAWGDNRHGVLGDGTNESRFTPVRS-KIYNVMGLDAGDAHALAVMVDGN 242

Query: 248 LHSACIDENGRVYIFGDRAVD--KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           + S   + NG++ + G    D  ++ F     +  P ++  L   + V  G  H+  L  
Sbjct: 243 VWSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGASHSVALAD 302

Query: 306 GGELYTWGSNENGCLGIGSI--DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            G ++TWGSN +G LG+G      +  P RV G             I  V  G  HT A+
Sbjct: 303 NGTVWTWGSNSDGQLGVGKTGGSDMTVPVRVSG----------INGITAVDAGLYHTLAL 352

Query: 364 -SEGKILTWG 372
             +G +  WG
Sbjct: 353 KDDGSVWAWG 362



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 28/202 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G LG G+ ESR+ PV    +    L A   G AH L +   G V++ G N  GQ
Sbjct: 197 WGDNRHGVLGDGTNESRFTPVRSKIYNVMGLDA---GDAHALAVMVDGNVWSWGYNYNGQ 253

Query: 103 LGIS----ENIGY--------SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           LG+      ++G         S  P  + GL   V  ++ G  HS A+  +G ++ WG N
Sbjct: 254 LGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSG-VKSVAVGASHSVALADNGTVWTWGSN 312

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           S+GQLG+GK     + +P +V  ++GI    A  G   ++A+   G V +WG+   G++G
Sbjct: 313 SDGQLGVGKTGGSDMTVPVRVSGINGITAVDA--GLYHTLALKDDGSVWAWGSNAEGQVG 370

Query: 211 HGQESSILGFLRSTSEYTPRLI 232
           +          RS S  +P L+
Sbjct: 371 N----------RSASAGSPALV 382



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 42/316 (13%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           ++     VV I+     S A+  DG ++ WG  S+G              P KVE     
Sbjct: 24  VTAWSPAVVSIAASNSTSVALLDDGTVWQWGYVSDG---------VEYATPQKVEI---S 71

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             ++ A G+   +A+ G G V +WG+   G+LG G  +   G         P  +  L G
Sbjct: 72  VVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAG---------PVQVAGLTG 122

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVC 295
           VK    AAG   S  +  +G V+ +G  +  ++     N+     P  +  L   + +  
Sbjct: 123 VKA--IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNIQAISA 180

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           GG H       G ++ WG N +G LG G+ +   +P R +             +++ +  
Sbjct: 181 GGSHCLASQGDGAVWAWGDNRHGVLGDGTNESRFTPVRSK-----------IYNVMGLDA 229

Query: 356 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG--GQLGHGNDVDYIHPTIVNFGENVK 412
           G  H  A+  +G + +WG+   +G     G S    G+L  G + D  +P IV     VK
Sbjct: 230 GDAHALAVMVDGNVWSWGY-NYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVK 288

Query: 413 ALQVSCGFNHTGALLE 428
           +  V+ G +H+ AL +
Sbjct: 289 S--VAVGASHSVALAD 302


>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Oryzias latipes]
          Length = 397

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 174/407 (42%), Gaps = 55/407 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG+LG G  E +  P +   S  +   ++ +  GG HT  +TE G V+  G N  
Sbjct: 13  WGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCGQNHK 72

Query: 101 GQLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLGI   ++   + + P+      + V  ++ G+  S  +T  G L   G N+ GQLG+
Sbjct: 73  GQLGIGHCADIATFQICPI----FNQRVTDVACGWDFSLLLTEGGRLLACGSNAFGQLGV 128

Query: 158 GKKAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           G+    +  P+  +V     I +   A G   S+AV   G V  W   G+G   H  +  
Sbjct: 129 GETVTHIADPLLVEVRFHEPIVS--VAAGLRHSLAVNDSGCVYQW---GNGLFSHVDDKE 183

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +    +  S+    L+K           AG  H  C+ E G ++++G    +++   E  
Sbjct: 184 MRTGDKCLSQKKSVLVK-----------AGSAHCVCLTEEGELFLWGSNKHEQLGTSESF 232

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 L   L   E+V     G  H    T  G ++TWG  + G LG  + D   +PE 
Sbjct: 233 LPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDS-QTPEE 291

Query: 334 VQGPF--SESPVDQICTSIVL--------VSCGWKHTAAISEGKILTWGWGGSHGTFSED 383
           +   F    S    +C    +        +SCG +H  A+   ++L+WGW          
Sbjct: 292 LLAGFITGTSQSRAVCCPAEVHVLRGATQISCGSEHNLAVVGDRLLSWGW---------- 341

Query: 384 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
             +  G  G+G   + +HP +++   N++A+ V CG  H+ A+   +
Sbjct: 342 --NEHGMCGNGFQTNVLHPGLIS---NLRAVLVGCGAGHSMAVCTRI 383



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 170/359 (47%), Gaps = 57/359 (15%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPL--RISG---LKKEVVQIST-GYHHSSAITVDGEL 144
           C++  G N +GQLG     G++ + L  R+SG   L+ +V+++   G  H++ IT  GE+
Sbjct: 9   CLHTWGANSYGQLG----QGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEV 64

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
           ++ G+N  GQLG+G  A     I T   C   IF ++    A G++ S+ +T GG++L+ 
Sbjct: 65  FVCGQNHKGQLGIGHCA----DIATFQIC--PIFNQRVTDVACGWDFSLLLTEGGRLLAC 118

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G+   G+LG G+  + +          P L++      +   AAG  HS  ++++G VY 
Sbjct: 119 GSNAFGQLGVGETVTHIA--------DPLLVEVRFHEPIVSVAAGLRHSLAVNDSGCVYQ 170

Query: 262 FGD---RAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           +G+     VD    + G+   +++ S++ K         G  H   LT  GEL+ WGSN+
Sbjct: 171 WGNGLFSHVDDKEMRTGDKCLSQKKSVLVK--------AGSAHCVCLTEEGELFLWGSNK 222

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWG- 374
           +  LG  S   L SP     P   S ++     +  V  GW H  A +E G++ TWG G 
Sbjct: 223 HEQLGT-SESFLPSPT----PLRRSLLNG--EKVSNVWSGWSHIIAQTESGRVFTWGRGD 275

Query: 375 -GSHGTFSEDGHS-----SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            G  G  + D  +     +G   G         P  V+      A Q+SCG  H  A++
Sbjct: 276 YGQLGRPNSDSQTPEELLAGFITGTSQSRAVCCPAEVHVLRG--ATQISCGSEHNLAVV 332


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 162/330 (49%), Gaps = 39/330 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HT+  TE G VYATG N+ G
Sbjct: 58  MFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEG 117

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L     S  K  + Q+S G + S+A+T DG+L+MWG NS GQ+GL 
Sbjct: 118 QLGLGDTDERDTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGL- 174

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K    + +P +V    G      + G+  S  VT  G++ ++G   SG+L  G  S +L
Sbjct: 175 -KDVTNVCVPHQVTI--GKPISWISCGYYHSAFVTIDGELYTFGESESGKL--GLPSQLL 229

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
                T+   P+L+  +    +++A  G  H+  + E   VY      FG   +   +F+
Sbjct: 230 -----TNHRIPQLVSSIPDKVIQVACGGG-HTLVLTEES-VYAFGLGQFGQLGLGTFIFE 282

Query: 274 EGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                  P ++  +   E+++   CG  HT ++T  G +YT+G   +G LG+G       
Sbjct: 283 ----TSEPKVLEYV-KGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGL------ 331

Query: 331 PERVQGPFSESPVDQICTSIV-LVSCGWKH 359
            E     F  +P       +V LV+CG  H
Sbjct: 332 -ENFTNRFFPTPCSVFLKFMVQLVACGGCH 360



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 50/350 (14%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + ++G V+      FG+   +ENI     P +        + +S G  HS+ +T + +L
Sbjct: 7   LVPDSGAVFT-----FGKTKFAENI-----PSKFWFKSDTPICLSCGDEHSAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  +  PT ++ L     K AA G   ++  T GG V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--VNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGN 114

Query: 205 GSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
             G+LG G         ++ F   TS++           K+K  +AG   SA + E+G++
Sbjct: 115 NEGQLGLGDTDERDTFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGQL 161

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +++GD +  ++  ++  +   P  ++       + CG YH+  +T  GELYT+G +E+G 
Sbjct: 162 FMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGK 221

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGT 379
           LG+ S   L +  R+        V  I   ++ V+CG  HT  ++E  +  +G G     
Sbjct: 222 LGLPS--QLLTNHRIP-----QLVSSIPDKVIQVACGGGHTLVLTEESVYAFGLG----- 269

Query: 380 FSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    GQLG G  + +   P ++ + +  K + +SCG NHT  + +
Sbjct: 270 -------QFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITD 312



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 148/323 (45%), Gaps = 41/323 (12%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+  +   L+CG  H+  +T    +Y  G N++GQLG+      + +P  I  LK E V+
Sbjct: 32  FKSDTPICLSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVN-KPTCIKALKPEKVK 90

Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
            +  G  H+   T  G +Y  G N+ GQLGLG    +          L   FT     KQ
Sbjct: 91  FAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDER------DTFHLISFFTSQHKIKQ 144

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S A+T  G++  WG    G++G    +++           P  +    G  + 
Sbjct: 145 LSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVC---------VPHQV--TIGKPIS 193

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGG 297
             + G+ HSA +  +G +Y FG+    K+        NH R P L+S +P    +V CGG
Sbjct: 194 WISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNH-RIPQLVSSIPDKVIQVACGG 252

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCG 356
            HT VLT    +Y +G  + G LG+G+     S  +V        ++ +    I+ +SCG
Sbjct: 253 GHTLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKV--------LEYVKGEKIISISCG 303

Query: 357 WKHTAAISE-GKILTWGWGGSHG 378
             HTA I++ G I T+G  G HG
Sbjct: 304 ENHTAMITDTGGIYTFG-DGRHG 325



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 14/71 (19%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +R+ P  CS F K  ++ +ACGG H L       V+AT     
Sbjct: 319 FGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHML-------VFAT----- 366

Query: 101 GQLGISENIGY 111
            Q G++E + +
Sbjct: 367 PQAGMAEELEF 377


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 136/300 (45%), Gaps = 19/300 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              L P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            K    E   C   HT    T GG +Y WG      + +  +    S + V   F+   V
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFATPAV 341



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 36/318 (11%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T   E++++G N +  LG G   + +  +P K++
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLD 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  L  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHI-MV 281

Query: 409 ENVKALQV-SCGFNHTGA 425
           E  + +++ +C   HT A
Sbjct: 282 EKERVIEIAACHSAHTSA 299



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ +  L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLDALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           LG + N    L P  I   K+ V++I+  +  H S+A T  G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 39/339 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  ++  +P +  A    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 303 WGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RI+G  +  +V  ++ G  H++ IT  G+L+ +G  + G LG G
Sbjct: 363 GLLGHGTDVSHWI-PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 421

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            +  + +  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 422 DR--ENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKN 479

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + +     R      P LI++         A G   +  +  +GRV+  G   V
Sbjct: 480 RLGHGDKDA-----RLEPTCVPSLIED----NFHRIACGHSLTVGLTTSGRVFTMGS-TV 529

Query: 268 DKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  + P L+         EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 530 YGQLGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGD 589

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           ++   SP  V     E+  D+    +  ++CG  +++AI
Sbjct: 590 VEDRKSPTLV-----EALKDR---HVKYIACGSNYSSAI 620



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 52/370 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G ++  G    G+LG  + +N+   ++P  +  +    V  ++ G 
Sbjct: 284 IACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNV---VQPRLVEAMASTTVDFVACGE 340

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
            H+ A+T+ GELY WG  ++  G LG G   +  IP       L G+       G   + 
Sbjct: 341 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLEGLQVALVTCGPWHTA 399

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G++ ++G G  G LGHG   ++           PR ++ L G++    A G  H+
Sbjct: 400 LITSTGQLFTFGDGTFGVLGHGDRENV---------SYPREVESLSGLRTIAVACGVWHT 450

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           A I E           +G+++ +GD   +++   + +    P+ +  L       + CG 
Sbjct: 451 AAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGH 510

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
             T  LT+ G ++T GS   G LG    D    P  V+  F+   V++I       +CG 
Sbjct: 511 SLTVGLTTSGRVFTMGSTVYGQLGNPQSDG-KLPCLVEDKFAGESVEEI-------ACGA 562

Query: 358 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
            H A + S+ ++ TWG G +            G+LGHG+  D   PT+V   ++     +
Sbjct: 563 YHVAVLTSKNEVFTWGKGAN------------GRLGHGDVEDRKSPTLVEALKDRHVKYI 610

Query: 417 SCGFNHTGAL 426
           +CG N++ A+
Sbjct: 611 ACGSNYSSAI 620



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 33/226 (14%)

Query: 218 LGFLRSTSEYTPR----LIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G  +S S ++PR    L + LE    + V   A G  H+A +   G ++ +G+ +  ++
Sbjct: 252 VGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRL 311

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G +  +P L+  +  +  + V CG +HTC +T  GELYTWG  ++  G LG G+ D
Sbjct: 312 GHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-D 370

Query: 327 VLH-SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 384
           V H  P+R+ GP            + LV+CG  HTA I S G++ T+G     GTF    
Sbjct: 371 VSHWIPKRIAGPLE-------GLQVALVTCGPWHTALITSTGQLFTFG----DGTF---- 415

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
               G LGHG+  +  +P  V     ++ + V+CG  HT A++E +
Sbjct: 416 ----GVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAIIEVI 457



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 54/310 (17%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+    +  ++G  K A+   P     +P  +E    +   Q A G + +  VT
Sbjct: 236 GDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVT 295

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ +WG    GRLGHG   +++          PRL++ +    V   A G  H+  +
Sbjct: 296 RQGELFTWGEESGGRLGHGVGKNVV---------QPRLVEAMASTTVDFVACGEFHTCAV 346

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
              G +Y +GD   +  L   G       P  I+      +   V CG +HT ++TS G+
Sbjct: 347 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQ 406

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI----- 363
           L+T+G    G LG G  + +  P  V+   S S +  I      V+CG  HTAAI     
Sbjct: 407 LFTFGDGTFGVLGHGDRENVSYPREVE---SLSGLRTIA-----VACGVWHTAAIIEVIV 458

Query: 364 -------SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
                  S GK+ TWG G  +            +LGHG+    + PT V         ++
Sbjct: 459 TQSSASVSSGKLFTWGDGDKN------------RLGHGDKDARLEPTCVPSLIEDNFHRI 506

Query: 417 SCGFNHTGAL 426
           +CG + T  L
Sbjct: 507 ACGHSLTVGL 516


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T  G +Y  G   +G+
Sbjct: 4005 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4064

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG S++    L+P  +  L+   VV I+  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4065 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4122

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4123 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4179

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4180 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4232

Query: 280  RPSLISKL--PYSEEVVCGGYHT 300
            RP L++ L       V CG  HT
Sbjct: 4233 RPRLVAALQGKKVNRVACGSAHT 4255



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2954 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3013

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3014 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3072

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3073 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3124 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3183

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3184 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3228

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3229 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3267



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2992 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3051

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3052 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3109

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3110 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3160

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3161 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3220

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3221 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3272

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3273 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3316



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3064 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3124 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3181

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3182 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3238

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3239 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3287

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3288 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3319



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 732 SWGSNDQ 738



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3010 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3070 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3128

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3129 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3182

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3183 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3237

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3238 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3297

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3298 GLEGQ--------KITRVACGSSHSVA 3316



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 714 -------VAAGSTHCLALTEDSEVHSWG 734



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 145/318 (45%), Gaps = 38/318 (11%)

Query: 113  LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
            LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG G ++      P  +E
Sbjct: 3973 LESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIE 4028

Query: 173  CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
             L GI     A G   S  VT  G + +WG G  GRLGH           S  +  P+L+
Sbjct: 4029 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---------SEDQLKPKLV 4079

Query: 233  KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY- 289
            + L+G +V   A  +G   + C+ ++  V+ +GD    K+     +  + P  I  L   
Sbjct: 4080 EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4139

Query: 290  -SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
               +V CG   +  LT  G +YTWG  +   LG GS D +  P +VQG   +        
Sbjct: 4140 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-------- 4191

Query: 349  SIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
             ++ ++ G  H    +E G++ TW            G +  GQLG G       P +V  
Sbjct: 4192 KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAIQRPRLVAA 4239

Query: 408  GENVKALQVSCGFNHTGA 425
             +  K  +V+CG  HT A
Sbjct: 4240 LQGKKVNRVACGSAHTLA 4257



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2946 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3003

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3055

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3056 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3115

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3116 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3167

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3168 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3209

Query: 423  TGAL 426
            + AL
Sbjct: 3210 SLAL 3213



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 667

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 668 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 715

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 716 AGSTHCLALTE 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 4163 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4222

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K+V +++ G  H+ A
Sbjct: 4223 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4257


>gi|255567172|ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
 gi|223536120|gb|EEF37775.1| cell cycle regulatory protein, putative [Ricinus communis]
          Length = 441

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 198/449 (44%), Gaps = 77/449 (17%)

Query: 24  LGICKRWISSTLQRRFAAL-WGNGDYGRLGL-----GSLESRWRPVVCSAFEKHSLKALA 77
           L   +R ISS   R    + +G+G +G LGL     G     + P + S      +  + 
Sbjct: 15  LNATRRCISSFNHRDTIVMSFGDGSHGALGLPNSLTGLGTDAYEPTIVSGLPS-DIVGVT 73

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHH- 134
            G  H+L +T TG ++A G N+  QLG  I        EP R+ GL K  V I + Y   
Sbjct: 74  AGHYHSLAVTSTGQLWAWGRNNEAQLGRCIPAPRDTWNEPKRVEGLNK--VHILSAYASG 131

Query: 135 --SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             S+AI  DG L++WGK+  GQLGLGK   +   +P+K+E L+G    + + G+  ++A+
Sbjct: 132 VVSAAIANDGSLWVWGKSKRGQLGLGKGITEAF-VPSKIEALAGTKIAKVSFGWGHALAL 190

Query: 193 TGGGKVLSWGAGGSGRLG------------------------HGQESSILGFLRSTSE-- 226
           +  GK+  WG    GRLG                           E  +L  +   ++  
Sbjct: 191 SEEGKLFGWGYSADGRLGKIMGALEVSALDSNANQQVPKLMLEASERLVLEGMEKENDMP 250

Query: 227 --YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGD--RAVDKM-LFQEGN 276
             + P L++EL G KV   A G  HS  +  +G +      I+G   RA  ++ LF    
Sbjct: 251 ILWDPCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDL 310

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG-IGSIDVLHSPERVQ 335
           +    S+ + L +S   +C    +        + +WG N++  LG +G   +   P  ++
Sbjct: 311 NIHPSSIAAGLGHS-LAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGI---PLEIE 366

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
           G   E PV         VS G  H+ A+ S+G++  WG G              G+LG G
Sbjct: 367 GLAGEIPVS--------VSGGRVHSIALTSKGEVWVWGCG------------KNGRLGLG 406

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           +  D   P +++  E  + LQ+  GF+H 
Sbjct: 407 SSSDEAEPILLDSLEGYEVLQIVSGFDHN 435



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 57/189 (30%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--------------- 104
           W P +        +  +ACG  H+L L   G + ++G N +GQLG               
Sbjct: 253 WDPCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDLNI 312

Query: 105 ----ISENIGYSLE-----------------------------------PLRISGLKKEV 125
               I+  +G+SL                                    PL I GL  E+
Sbjct: 313 HPSSIAAGLGHSLAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGIPLEIEGLAGEI 372

Query: 126 -VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            V +S G  HS A+T  GE+++WG   NG+LGLG  + +  PI   ++ L G    Q   
Sbjct: 373 PVSVSGGRVHSIALTSKGEVWVWGCGKNGRLGLGSSSDEAEPI--LLDSLEGYEVLQIVS 430

Query: 185 GFEQSVAVT 193
           GF+ ++ + 
Sbjct: 431 GFDHNLVLA 439


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 174/393 (44%), Gaps = 45/393 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3184 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 3241

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3242 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3299

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3300 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3354

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L+  L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3355 ------SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3409 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3468

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
            +VQG   +         ++ ++ G  H    +E    TW            G +  GQLG
Sbjct: 3469 QVQGLQGK--------KVIAIATGSLHCVCCTEDGSYTW------------GDNDEGQLG 3508

Query: 393  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             G       P +V   +  K  +V+CG  HT A
Sbjct: 3509 DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3541



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2186 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2245

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2246 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2304

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2305 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2355

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2356 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2415

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2416 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2460

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2461 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2499



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2224 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2283

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2284 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2341

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2342 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2392

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2393 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2452

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2453 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 2504

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2505 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2296 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2355

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2356 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2413

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2414 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2470

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2471 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2519

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2520 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2551



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2242 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2302 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2360

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2361 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2414

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2415 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2469

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2470 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2529

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 2530 GLEGQ--------KITRVACGSSHSVA 2548



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2178 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2235

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2287

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2288 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2347

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 2348 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 2399

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 2400 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 2441

Query: 423  TGAL 426
            + AL
Sbjct: 2442 SLAL 2445



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3179 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 3237

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3238 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3297

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3298 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3348

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 3349 RLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 3409 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 3454

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3455 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3487



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 3177 GSGTIYGWGHNHRGQLGGIEGAKV---------KVPTPCEALAALRPVQLIGGEQTLFAV 3227

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3228 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3288 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 3339

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V+  +  + + V+CG
Sbjct: 3340 YTWGKG------------RYGRLGHSDSEDQLKPKLVDALQGHRVVDVACG 3378


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 177/394 (44%), Gaps = 46/394 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G  V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4131 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 333  RVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 391
            +VQG   +         ++ ++ G  H    +E G++ TW            G +  GQL
Sbjct: 4245 QVQGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQL 4284

Query: 392  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G G       P +V   +  K  +V+CG  HT A
Sbjct: 4285 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3192 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3236

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDAGQVY 3280

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3281 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 733 SWGSNDQ 739



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3306 GLEGQ--------KITRVACGSSHSVA 3324



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 715 -------VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 3175

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3176 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3217

Query: 423  TGAL 426
            + AL
Sbjct: 3218 SLAL 3221



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 135/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L   +  +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4185 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4230

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    PV+ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4003

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4004 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 4115

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +    + V+CG
Sbjct: 4116 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACG 4154


>gi|418738679|ref|ZP_13295072.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii serovar Castellonis str. 200801910]
 gi|410745377|gb|EKQ98287.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii serovar Castellonis str. 200801910]
          Length = 506

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +        + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S++P+ + GL  +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A   +   P KVE LSGI  KQ A G +  +A+   G++ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L         AG   S  I +NG V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H   L   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 487



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 158/367 (43%), Gaps = 42/367 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AI  +G +Y WG N+ GQLG+G         +AA     PT V  ++       A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G        L + S    P  +  L  V   I  A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 300

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ENG VY++G      +    L         P  +  L   +++  G  H  
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L S G +Y+WG N +G LGIG      SP     P   + +  I  +  + + G +  +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNP---TQILNIKNASSVWAGGTQSFS 414

Query: 362 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGF 420
            +  G++  WG          +G+++   +G  N +    P     G +NV  +   CG 
Sbjct: 415 ILKNGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGA 463

Query: 421 NHTGALL 427
            H  ALL
Sbjct: 464 THNFALL 470



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+     P  +
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233

Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
             + G+   +  A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +     +  +P +V+G      
Sbjct: 292 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG------ 345

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                + I  ++ G  H  A+ S+G+I +WG   S
Sbjct: 346 ----LSGIKQIANGRDHILALASDGRIYSWGLNAS 376



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 149/348 (42%), Gaps = 35/348 (10%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  ++G+LG G S       V+       ++ ++     +++ + + G VY  G N  GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 209

Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           LGI  N          G    P  + G+   V+  + G++H+  +  DG +  +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268

Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           QLG G     A      P  V  LS +   Q   G E S A+T  G+V  WG    G LG
Sbjct: 269 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 326

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G+ S+      +  + TP  ++ L G+K    A G  H   +  +GR+Y +G  A  ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASDGRIYSWGLNASGQL 379

Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC-LGIGSID 326
                   N    P+ I  +  +  V  GG  +  +   GE+  WG+N N   L IG  +
Sbjct: 380 GIGGNGSPNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGW 373
            L   E  +             +++   CG  H  A + +G+I  WGW
Sbjct: 440 TLKVYEPNKAVVG-------IDNVIHFGCGATHNFALLGDGEIYGWGW 480



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L +    +  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P     L  K    +  G   S +I  +GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   + A+ G G++  WG    G LG 
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 488


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T  G +Y  G   +G+
Sbjct: 3815 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3874

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG S++    L+P  +  L+   VV I+  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 3875 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3932

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 3933 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3989

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 3990 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4042

Query: 280  RPSLISKL--PYSEEVVCGGYHT 300
            RP L++ L       V CG  HT
Sbjct: 4043 RPRLVAALQGKKVNRVACGSAHT 4065



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 172/392 (43%), Gaps = 42/392 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         P  C A        L  G    L +T  G +YATG    G+
Sbjct: 3709 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGR 3768

Query: 103  LGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG G
Sbjct: 3769 LGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3826

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH       
Sbjct: 3827 NRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD----- 3879

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     +
Sbjct: 3880 ----SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3935

Query: 277  HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +V
Sbjct: 3936 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 3995

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 393
            QG   +         ++ ++ G  H    +E G++ TW            G +  GQLG 
Sbjct: 3996 QGLQGK--------KVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGD 4035

Query: 394  GNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G       P +V   +  K  +V+CG  HT A
Sbjct: 4036 GTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4067



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2772

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2773 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2831

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2832 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 2943 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 2987

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2988 --------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3026



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2810

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2811 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2868

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2980 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3031

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3032 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2997

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3046

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3078



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2887

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2996

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3056

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3057 GLEGQ--------KITRVACGSSHSVA 3075



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 139/292 (47%), Gaps = 29/292 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D  +LG  + +    EP  IS        K VV I+ G  +
Sbjct: 481 GHHYLALAATGEVYSWGCGDGRRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 539

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 597

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 648

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 649 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 708

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           +WGSN+  C    ++ V   PE    P  ++        IV ++CG   ++A
Sbjct: 709 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT------KHIVGIACGPAQSSA 752



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 146/328 (44%), Gaps = 52/328 (15%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L +   G V     N             +L P  + GL
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYN-----------SDTLVPQLVQGL 467

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + VV+I+  +  HH  A+   GE+Y WG     +LG G      +P+  P  +   SG
Sbjct: 468 ASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGD----TVPLEEPKVISAFSG 523

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 571

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 632 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 690

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  V+ G  H  A++E  ++ +WG
Sbjct: 691 -------VAAGSTHCLALTEDSEVHSWG 711



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD  RLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 496 WGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 555 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 613

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 671

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 672 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
              +   A  P L +K  +   + CG   +   ++G   Y W
Sbjct: 723 RVTKPEPAALPGLDTK--HIVGIACGPAQS---SAGSSXYEW 759



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 133/304 (43%), Gaps = 49/304 (16%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2814

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2815 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2874

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKI 368
            WG  E G LG G       P+ V+              ++ V+CG +     A   EG +
Sbjct: 2875 WGLGEYGRLGHGDNTTQLKPKMVKVLLGH--------RVIQVACGSRDAQTLALTDEGLV 2926

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 422
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 2927 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 2968

Query: 423  TGAL 426
            + AL
Sbjct: 2969 SLAL 2972



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3704 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATG 3762

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3763 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3822

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3823 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3873

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3874 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3933

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 3934 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 3979

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3980 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4012



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G   RLGHG    +           P++I    G +    V   A 
Sbjct: 485 LALAATGEVYSWGCGDGRRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 535

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 595

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 596 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 644

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 645 FSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVA 692

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 693 AGSTHCLALTE 703



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +  +A         +
Sbjct: 3702 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLA---------V 3752

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3753 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3812

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 3813 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 3864

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 3865 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 3903


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 173/370 (46%), Gaps = 48/370 (12%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGY--SLEPLRISGLKKE 124
           E  S+ ++  GG  +  L   G V+ TG N+ GQLG    ++  Y   ++ L       +
Sbjct: 32  ESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELY------D 85

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VV + +   H+ AIT  G ++ WG NS G++  G    K I  P ++  L  I   Q + 
Sbjct: 86  VVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEG---GKNIARPVQINGLKDIV--QVST 140

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           G   S+A+   G V SWG    G+LG+G  Q+SSI           P  ++ L  + V I
Sbjct: 141 GLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI-----------PTKVEFLSNI-VAI 188

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            A G  HS  +  +G+V+ +G     ++   E   +  P L+  L   E +  G  H+  
Sbjct: 189 EA-GAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLA 247

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PV--DQICTSIVLVSCGWKH 359
           L   G ++ WG N NG +G GS +V     +++   +++ PV  + +   +  VS G KH
Sbjct: 248 LDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKH 307

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
           + A++E G++  WGW            +  GQLG+G+  D   P   N G ++  + +  
Sbjct: 308 STALTENGEVYAWGW------------NEYGQLGNGSMKDSKVPLRNNVGRSI--IDIET 353

Query: 419 GFNHTGALLE 428
           G  H+ A+ E
Sbjct: 354 GSYHSFAVDE 363



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 133/275 (48%), Gaps = 26/275 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           RPV  +  +   +  ++ G  H+L L ++G V++ G N +GQLG   N   S+ P ++  
Sbjct: 125 RPVQINGLK--DIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI-PTKVEF 181

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           L   +V I  G  HS A++ DG+++ WG+N  GQLG G+       IP  V+ L  I  +
Sbjct: 182 LSN-IVAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKS--NIPRLVKNLENI--E 236

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--SILGFLRSTSEYT-PRLIKELEG 237
             A G   S+A+   G + +WG   +G++G G  +     G LR     T P  +  L G
Sbjct: 237 MIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG 296

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            KVK  +AG  HS  + ENG VY +G     ++    GN + + S   K+P         
Sbjct: 297 -KVKQVSAGIKHSTALTENGEVYAWGWNEYGQL----GNGSMKDS---KVPLRNNVGRSI 348

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++  G YH+  +   G +Y WG    G LG G+ 
Sbjct: 349 IDIETGSYHSFAVDESGVIYAWGDATYGQLGDGTF 383



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 17/181 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+LG G  E    P +    E  +++ +A G  H+L L   G ++A G N  GQ
Sbjct: 207 WGRNEFGQLGNGETEKSNIPRLVKNLE--NIEMIAGGDNHSLALDHDGAIWAWGYNSNGQ 264

Query: 103 LGISENIGYS-----------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           +G   +  Y             EP++++GL  +V Q+S G  HS+A+T +GE+Y WG N 
Sbjct: 265 IGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNE 324

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG G      +P+   V    G        G   S AV   G + +WG    G+LG 
Sbjct: 325 YGQLGNGSMKDSKVPLRNNV----GRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGD 380

Query: 212 G 212
           G
Sbjct: 381 G 381


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 157/381 (41%), Gaps = 37/381 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN     LG  + +    P + +   + +   +A G   T  +   G +++ G +   Q
Sbjct: 4   WGNTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSHTRPQ 63

Query: 103 LGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
             +   +G++   L  + GL+ E     +   H  A+T+ GE+Y WG NS  QLG     
Sbjct: 64  NDVKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVN 123

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P K+  L G    Q   G   S AV+  G + +WG GG GRLGHG    +    
Sbjct: 124 NR----PMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDV---- 175

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   R+    EG++V   A G    HS C+ E+G +Y FGD    K+     +  R
Sbjct: 176 ----NVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRR 231

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           +P  I       +VVCG   +  ++  G LY WG      LG G+  V+  P       +
Sbjct: 232 QPERIDFDIV--KVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNT 289

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
              VD   +S        +H  A+++ G++  WG    HG    D          G++  
Sbjct: 290 HKVVDCALSS--------EHGVAVTDRGEVFVWG-ANDHGQLGADA---------GSEKT 331

Query: 399 YIHPTIVNF-GENVKALQVSC 418
            I P ++   GE     +V C
Sbjct: 332 IIAPRVIKLPGEFPAVNRVHC 352



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 36/228 (15%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG             + LG++ +    +P++   L  +     A G   +  ID  G
Sbjct: 1   VFSWG---------NTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEG 51

Query: 258 RVYIFGD--RAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTCVLTSGGELYTWGS 314
           R++  G   R  + +    G+     +L+  L     + V    H   +T  GE+Y+WGS
Sbjct: 52  RLWSCGSHTRPQNDVKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGS 111

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGW 373
           N    LG   ++  + P ++     E  V Q+C        G  H+AA+S+ G + TWG 
Sbjct: 112 NSYKQLGRDGVN--NRPMKITALEGEEVV-QVC-------AGGHHSAAVSKAGNLYTWGR 161

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGF 420
           GG             G+LGHG   D   PT +  F E ++ + V+CG 
Sbjct: 162 GGY------------GRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGL 197



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 31/63 (49%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG G   RLG G+    W+P    A   H +   A    H + +T+ G V+  G ND G
Sbjct: 261 VWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHG 320

Query: 102 QLG 104
           QLG
Sbjct: 321 QLG 323


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 43/347 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2923 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2982

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   I IP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 2983 NGRLGLGLSSG-TIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3041

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3042 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3152

Query: 326  DVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFS 381
            +  + P   ER+ G             +  + CG + + A+++ G + TWG G       
Sbjct: 3153 EGCNIPQNIERLNG-----------QGVCQIECGAQFSLALTKSGVVWTWGKGDYF---- 3197

Query: 382  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                    +LGHG DV    P IV      K + V+ G  H  A+ +
Sbjct: 3198 --------RLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTD 3236



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G +YA G    G+LG+  + G    P +IS L   VV+   + +G  H
Sbjct: 2961 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRH 3020

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3021 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3078

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+L+K L G +V   A G     +  
Sbjct: 3079 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3130 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3189

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG G+   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 3190 TWGKGDYFRLGHGTDVHVRKPQIVEGLRGKK--------IVHVAVGALHCLAVTDSGQVY 3241

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3242 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 165/357 (46%), Gaps = 43/357 (12%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   +KK  V +++G  
Sbjct: 3935 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGK 3992

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GE+Y WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 3993 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4050

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L+  L+G +V   A  +G   + 
Sbjct: 4051 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4101

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 4102 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4161

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKI 368
            YTWG  +   LG GS D +  P +VQG   +         ++ ++ G  H    +E G++
Sbjct: 4162 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--------KVIAIATGSLHCVCCTEDGEV 4213

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             TW            G +  GQLG G       P +V   +  K  +V+CG  HT A
Sbjct: 4214 YTW------------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+ +G VY+ G  D G+LG  +   Y  EP  I+        K+VVQI+ G  +
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDAT-YLEEPALITTFSGKQTGKQVVQIACGSTY 513

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+A+T DGELY WG+ + G+LG G  +++ +  P  V  L G      A G    Q++AV
Sbjct: 514 SAAVTADGELYTWGRGNYGRLGHG--SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAV 571

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+L+++L+ + +     G   S  
Sbjct: 572 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  ++  G  H   LT  GE++
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVH 682

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 683 SWGSNDK 689



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 151/335 (45%), Gaps = 28/335 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   SA   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 2979 GEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3038

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3039 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD 3097

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3098 NTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3151

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3152 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3206

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3207 VRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3266

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
            G   +         I  V+CG  H+ A +   + T
Sbjct: 3267 GLEGQ--------KITRVACGSSHSVAWTTVDVTT 3293



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3033 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3150

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 3151 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3207

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN    
Sbjct: 3208 ------RKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTTT 3257

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3258 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3288



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G ++  G   +G+
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4065

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4066 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4123

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4124 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4180

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4181 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4233

Query: 280  RPSLISKLPYSE--EVVCGGYHT 300
            RP L++ L   +   V CG  HT
Sbjct: 4234 RPRLVAALQGKKINRVACGSAHT 4256



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 146/323 (45%), Gaps = 42/323 (13%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C A     +  + C     L L+ +G VY                  +L P+ I GL
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK-----------STTLAPMLIHGL 441

Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++  GE+Y WG    G+LG G   A  +  P  +   SG  
Sbjct: 442 SSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD--ATYLEEPALITTFSGKQ 499

Query: 179 T----KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           T     Q A G   S AVT  G++ +WG G  GRLGHG    +          TP L+  
Sbjct: 500 TGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDV---------TTPMLVTA 550

Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           L+G KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL   + 
Sbjct: 551 LKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI 610

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSI 350
            +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ +     +  VD      
Sbjct: 611 VKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD------ 664

Query: 351 VLVSCGWKHTAAIS-EGKILTWG 372
             ++ G  H  A++ EG++ +WG
Sbjct: 665 --IAVGSTHCLALTDEGEVHSWG 685



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 23/230 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLK---ALACGGAHTLFLTETGCVYATGLN 98
           WG GD GRLG G       P + + F  K + K    +ACG  ++  +T  G +Y  G  
Sbjct: 470 WGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRG 529

Query: 99  DFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNG 153
           ++G+L  G SE++     P+ ++ LK ++VV ++  +G   + A+T +G+++ WG    G
Sbjct: 530 NYGRLGHGSSEDVTT---PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 586

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG 
Sbjct: 587 KLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 644

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +  +           P+L+  L+G KV   A G  H   + + G V+ +G
Sbjct: 645 DEHV---------RYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 6/171 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +A +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 585

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG   + G     L       ++V++  G   S A+T DG++Y WGK  N +LG G  
Sbjct: 586 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 645

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             + +  P  ++ L G      A+G    +A+T  G+V SWG+  + +L H
Sbjct: 646 --EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGS--NDKLQH 692



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 45/302 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA ++  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2915 SAASIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2972

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GK+ + G   +GRLG G  S  +   R  S  +  ++K     KV + + G  H+  +  
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 3026

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+WG
Sbjct: 3027 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3086

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILT 370
              E G LG G       P+ V+              ++ V+CG +     A   EG + +
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVKVLLGH--------RVIQVACGSRDAQTLALTDEGLVFS 3138

Query: 371  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTG 424
            WG     G F        G+LG G           N  +N++ L      Q+ CG   + 
Sbjct: 3139 WG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSL 3180

Query: 425  AL 426
            AL
Sbjct: 3181 AL 3182



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 137/340 (40%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
            G +Y WG N  GQLG G + AKV +P PT+                              
Sbjct: 3895 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3953

Query: 171  --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                                +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3954 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4013

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 4014 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4064

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4065 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4124

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 4125 SDGCKVPMK---------IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH----- 4170

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4171 -------RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4203



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 38/248 (15%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P LI    G +    V   A 
Sbjct: 459 LALSTSGEVYSWGCGDGGRLGHGD---------ATYLEEPALITTFSGKQTGKQVVQIAC 509

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA +  +G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 510 GSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTL 569

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            +T  G++++WG  + G LG G  D   +P+ V+              IV V CG + + 
Sbjct: 570 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD--------LDIVKVCCGSQFSV 621

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
           A++ +G++ TWG G +             +LGHG D    +P +++  +  K + ++ G 
Sbjct: 622 ALTKDGQVYTWGKGDNQ------------RLGHGTDEHVRYPKLLDSLQGKKVVDIAVGS 669

Query: 421 NHTGALLE 428
            H  AL +
Sbjct: 670 THCLALTD 677



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 580 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 639

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  +  L+ K+VV I+ G  H  A+T +GE++ WG N   Q    L
Sbjct: 640 LGHGTDEHVRY---PKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTL 696

Query: 156 GLGKKAAKVIP 166
              KK  K +P
Sbjct: 697 FPNKKQPKALP 707



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +     + +  T R ++ + G +   A          
Sbjct: 3893 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTA------- 3945

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3946 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4003

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG G+      P  ++       VD        ++ G  H+A I+  G++
Sbjct: 4004 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD--------IAAGGAHSACITASGEL 4055

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGHG+  D + P +V+  +  + + V+CG
Sbjct: 4056 FTWGKG------------RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 4094



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 27/212 (12%)

Query: 224 TSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           ++   P LI  L   K VK+AA     H   +  +G VY +G     ++   +  +   P
Sbjct: 430 STTLAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEP 489

Query: 282 SLISKLPYSE------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           +LI+     +      ++ CG  ++  +T+ GELYTWG    G LG GS + + +P  V 
Sbjct: 490 ALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVT 549

Query: 336 GPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
               +  VD  C S      G   T A++E G++ +WG G              G+LG G
Sbjct: 550 ALKGQKVVDVACGS------GDAQTLAVTENGQVWSWGDGDY------------GKLGRG 591

Query: 395 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                  P +V   +++  ++V CG   + AL
Sbjct: 592 GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL 623



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 4164 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4223

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K++ +++ G  H+ A
Sbjct: 4224 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4258


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 152/341 (44%), Gaps = 43/341 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG- 101
           WG G  G+LG         P +  + +   +K +ACG   T  LT++G ++  G N +G 
Sbjct: 329 WGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGG 388

Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            L   E  G    P +ISG      +  ++ G  H++A++  G+L+ +G  + G LG G 
Sbjct: 389 NLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGN 448

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-----------GGKVLSWGAGGSGR 208
              + +  P +VE L G++ K  A G   + A+             GGK+ +WG G  GR
Sbjct: 449 --LQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGR 506

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH      L          P  + +L        + G + +  +   G++Y  G     
Sbjct: 507 LGHADLEKKL---------QPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHG 557

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN   +   I+      K  + +E+  G YH   LTSGG +YTWG   NG LG+
Sbjct: 558 QL----GNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGL 613

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G+++  + P  V     E+  D+   SI   +CG   TAAI
Sbjct: 614 GNVEDRNVPTLV-----EALRDRQVQSI---ACGSNLTAAI 646



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 174/371 (46%), Gaps = 46/371 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
            ++ ++ G  H   +T+ G V+  G    G+LG   ++  S  P  +  L   +V+ ++ 
Sbjct: 306 DVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVS-SPTIVESLDGFLVKFVAC 364

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           G + + A+T  GEL++WG+N  G   + ++      +P ++   L+G+     A G   +
Sbjct: 365 GEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHT 424

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            AV+  G++ ++G G  G LGHG        L+S S   P+ ++ L+G+ VK  A G  H
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGN-------LQSVSH--PKEVESLKGLWVKSVACGSWH 475

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCG 296
           +A I +            G+++ +GD    ++   +     +P+ +++L   +  +V CG
Sbjct: 476 TAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCG 535

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCG 356
              T  LT  G++YT GS+ +G LG        S   V+G   E  V +I       S G
Sbjct: 536 RMLTVALTRTGKIYTMGSSVHGQLGNPQAKN-KSIAIVEGKLKEEFVKEI-------SSG 587

Query: 357 WKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
             H AA++ G  + TWG G            + GQLG GN  D   PT+V    + +   
Sbjct: 588 SYHVAALTSGGSVYTWGKG------------TNGQLGLGNVEDRNVPTLVEALRDRQVQS 635

Query: 416 VSCGFNHTGAL 426
           ++CG N T A+
Sbjct: 636 IACGSNLTAAI 646



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  +LG   +  +T  G+V  WG G  G+LGH  +  +         
Sbjct: 295 LPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDV--------- 345

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
            +P +++ L+G  VK  A G   +  + ++G ++++G+      L  E     +  P  I
Sbjct: 346 SSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQI 405

Query: 285 SKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GP 337
           S  P +      V CG +HT  ++S G+L+T+G    G LG G++  +  P+ V+   G 
Sbjct: 406 SG-PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGL 464

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
           + +S           V+CG  HTAAI +     + + G  G     G    G+LGH +  
Sbjct: 465 WVKS-----------VACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLE 513

Query: 398 DYIHPTIVNFGENVKALQVSCGFNHTGAL 426
             + PT V        +QVSCG   T AL
Sbjct: 514 KKLQPTCVAQLVEHDFVQVSCGRMLTVAL 542



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 28/209 (13%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+L++    + V+  + G  H+A I + G V+ +G+ +  K+  +       P+++  L 
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 289 --YSEEVVCGGYHTCVLTSGGELYTWGSNENG----CLGIGSIDVLHSPERVQGPFSESP 342
               + V CG Y TC LT  GEL+ WG N+ G    C        L  P ++ GP +   
Sbjct: 356 GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWL--PRQISGPLAG-- 411

Query: 343 VDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 401
                 SI  V+CG  HTAA+S  G++ T+G     GTF        G LGHGN     H
Sbjct: 412 -----VSISNVACGDWHTAAVSSSGQLFTYG----DGTF--------GVLGHGNLQSVSH 454

Query: 402 PTIVNFGENVKALQVSCGFNHTGALLEYV 430
           P  V   + +    V+CG  HT A+++ +
Sbjct: 455 PKEVESLKGLWVKSVACGSWHTAAIVDVI 483


>gi|125538482|gb|EAY84877.1| hypothetical protein OsI_06242 [Oryza sativa Indica Group]
          Length = 445

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 180/395 (45%), Gaps = 67/395 (16%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKK-EVVQI 128
           S+ A+A G  H+L ++  G V+A G ND GQLG   +   +   +P ++ GL+  +V  +
Sbjct: 69  SVAAVAAGHYHSLAVSAEGEVWAWGRNDEGQLGRGHHAPRNTWSKPEKVRGLENVQVRAV 128

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S     S+AI  DG L++WG++  GQLGLGK   +   +P++VE L+     + + G+  
Sbjct: 129 SACGVVSAAIGCDGSLWVWGRSRRGQLGLGKDIVEAA-VPSRVEALANYDIVKVSFGWGH 187

Query: 189 SVAVTGGGKVLSWGAGGSGRLGH-GQ------------------ESSILGFLRSTSE--- 226
           ++A+T  G +L WG   +GRLG  GQ                   SS+L  +    E   
Sbjct: 188 AMALTKDGGLLGWGYSENGRLGEIGQITQASSAKELLGKTVDKYSSSMLEAVEKMVEEKI 247

Query: 227 ---------YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    + P L+ E+  V+V   + G  HS  +  +G V   GD    ++  +    
Sbjct: 248 RSEDNMPIIWEPSLVHEVCHVEVSDVSCGLDHSLVLCSDGIVLSGGDNTYGQLGRKSAWS 307

Query: 278 ARRPSLISKLPYSEEVVCG-GYHTCVLTSGGE------LYTWGSNENGCLG-IGSIDVLH 329
              P  IS  P+S     G    TC++++ G+      + +WG N +  LG  G  DV  
Sbjct: 308 KFLPVDISHSPFSVSASVGHSLATCIISTEGDDHAETGVLSWGWNCSSQLGRPGKEDV-- 365

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 388
            P  V G   E PV          S G  H+ A+ S+G++  WG G              
Sbjct: 366 -PALVDGLNGERPVS--------ASAGRVHSVALTSKGEVWAWGSG------------RN 404

Query: 389 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           G+LG G+ +D   P +++  E  +  QV+ G +HT
Sbjct: 405 GRLGLGSSMDEPEPFLIDTLEGAEVSQVAAGMDHT 439



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 145/350 (41%), Gaps = 76/350 (21%)

Query: 43  WGNGDYGRLGLGSLESR--W-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG  D G+LG G    R  W +P      E   ++A++  G  +  +   G ++  G + 
Sbjct: 92  WGRNDEGQLGRGHHAPRNTWSKPEKVRGLENVQVRAVSACGVVSAAIGCDGSLWVWGRSR 151

Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
            GQLG+ ++I  +  P R+  L   ++V++S G+ H+ A+T DG L  WG + NG+LG  
Sbjct: 152 RGQLGLGKDIVEAAVPSRVEALANYDIVKVSFGWGHAMALTKDGGLLGWGYSENGRLGEI 211

Query: 157 ------------LGKKAAKV---------------------IPI---PTKVECLSGIFTK 180
                       LGK   K                      +PI   P+ V  +  +   
Sbjct: 212 GQITQASSAKELLGKTVDKYSSSMLEAVEKMVEEKIRSEDNMPIIWEPSLVHEVCHVEVS 271

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             + G + S+ +   G VLS G    G+LG  ++S+   FL     ++P  +        
Sbjct: 272 DVSCGLDHSLVLCSDGIVLSGGDNTYGQLG--RKSAWSKFLPVDISHSPFSVS------- 322

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--------QEGNHARR--PSLISKLPYS 290
             A+ G   + CI     +   GD   +  +         Q G   +   P+L+  L   
Sbjct: 323 --ASVGHSLATCI-----ISTEGDDHAETGVLSWGWNCSSQLGRPGKEDVPALVDGLNGE 375

Query: 291 EEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             V    G  H+  LTS GE++ WGS  NG LG+GS   +  PE    PF
Sbjct: 376 RPVSASAGRVHSVALTSKGEVWAWGSGRNGRLGLGS--SMDEPE----PF 419



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 91/200 (45%), Gaps = 26/200 (13%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           W P +        +  ++CG  H+L L   G V + G N +GQLG  ++      P+ IS
Sbjct: 257 WEPSLVHEVCHVEVSDVSCGLDHSLVLCSDGIVLSGGDNTYGQLG-RKSAWSKFLPVDIS 315

Query: 120 GLKKEVVQISTGYHHSSA---ITVDGE------LYMWGKNSNGQLGLGKKAAKVIPIPTK 170
                   +S    HS A   I+ +G+      +  WG N + QLG   K      +P  
Sbjct: 316 ---HSPFSVSASVGHSLATCIISTEGDDHAETGVLSWGWNCSSQLGRPGKE----DVPAL 368

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           V+ L+G     A+ G   SVA+T  G+V +WG+G +GRLG G          S  E  P 
Sbjct: 369 VDGLNGERPVSASAGRVHSVALTSKGEVWAWGSGRNGRLGLGS---------SMDEPEPF 419

Query: 231 LIKELEGVKVKIAAAGFLHS 250
           LI  LEG +V   AAG  H+
Sbjct: 420 LIDTLEGAEVSQVAAGMDHT 439



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 21/158 (13%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  YG+LG  S  S++ PV  S    HS  +++    H+L      C+ +T  +D  + 
Sbjct: 293 GDNTYGQLGRKSAWSKFLPVDIS----HSPFSVSASVGHSL----ATCIISTEGDDHAET 344

Query: 104 GI-------SENIGYSLE---PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
           G+       S  +G   +   P  + GL  E  V  S G  HS A+T  GE++ WG   N
Sbjct: 345 GVLSWGWNCSSQLGRPGKEDVPALVDGLNGERPVSASAGRVHSVALTSKGEVWAWGSGRN 404

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+LGLG    +  P P  ++ L G    Q A G + ++
Sbjct: 405 GRLGLGSSMDE--PEPFLIDTLEGAEVSQVAAGMDHTL 440


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P +IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           +GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +   L+   V   A G +    + + G VY++G     ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN---- 293

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            S +    P +    D+I   I + +C   HT+A     G +  WG
Sbjct: 294 KSNQSYPTPVTVEK-DRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG      +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTDEGQV 278

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 279 YAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 58/355 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G +GRLG         P +  +     +K +ACG  HT  LT++G VY  G ND   
Sbjct: 328 WGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWG-NDVCC 386

Query: 103 LG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
                        I + +G SL+ + IS        ++ G  H++ ++  G L+ +G  +
Sbjct: 387 ADLLIEGRTRSQWIPQKLGGSLDGISISS-------VACGEWHTAIVSSCGRLFTYGDGT 439

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLS 200
            G LG G    +    P +VE LSG+  + AA G   + A+           +  GK+ +
Sbjct: 440 FGVLGHGD--LRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFT 497

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLGH         + + S+  P  + +L        + G + +  +   G+V+
Sbjct: 498 WGDGDEGRLGH---------VDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVF 548

Query: 261 IFGDRAVDKMLFQEGN-HARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSN 315
             G     ++    GN HAR  +++ +    +E V     G YH  VLTSGG +YTWG  
Sbjct: 549 AMGSAKYGQL----GNPHARDKAVMVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWGRG 604

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILT 370
           ENG LG+G  +  ++P      F E+  D+    +  ++CG   TAAIS  K ++
Sbjct: 605 ENGQLGLGDTEDRYTP-----CFVEALRDR---QVNTITCGPSFTAAISLHKPIS 651



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 45/366 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A GG H    T+ G V+  G   +G+LG   ++  S   +  S     V  ++ G +H+
Sbjct: 309 IALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHT 368

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTG 194
            A+T  GE+Y WG +      L +   +   IP K+   L GI     A G   +  V+ 
Sbjct: 369 CALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSS 428

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ ++G G  G LGHG        LRS S  +P+ ++ L G++V+ AA G  H+A I 
Sbjct: 429 CGRLFTYGDGTFGVLGHGD-------LRSYS--SPKEVESLSGLRVRSAACGSWHTAAIV 479

Query: 255 E-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           E           +G+++ +GD    ++   +      P+ +++L   +  +V CG   T 
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTV 539

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            LT+ G+++  GS + G LG       +   R +    E  + Q    + ++S G  H A
Sbjct: 540 ALTNMGKVFAMGSAKYGQLG-------NPHARDKAVMVEGQLKQ--EFVKVISTGSYHVA 590

Query: 362 AISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
            ++ G  + TWG G              GQLG G+  D   P  V    + +   ++CG 
Sbjct: 591 VLTSGGSVYTWGRG------------ENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGP 638

Query: 421 NHTGAL 426
           + T A+
Sbjct: 639 SFTAAI 644



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 24/266 (9%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E  + +     ALG + +   T  G+V  WG G  GRLG   +  I         
Sbjct: 294 VPKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDI--------- 344

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            +P+++  L G+ VK  A G  H+  + ++G VY +G+      L  EG   R   +  K
Sbjct: 345 SSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEG-RTRSQWIPQK 403

Query: 287 LPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           L  S        V CG +HT +++S G L+T+G    G LG G +    SP+ V+     
Sbjct: 404 LGGSLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSG- 462

Query: 341 SPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 400
                    +   +CG  HTAAI E     + +  + G     G    G+LGH ++   +
Sbjct: 463 -------LRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKL 515

Query: 401 HPTIVNFGENVKALQVSCGFNHTGAL 426
            PT V    +   +QVSCG   T AL
Sbjct: 516 VPTRVTQLVDYDFVQVSCGRMLTVAL 541



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 29/239 (12%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V+ WG G    +G   E  +   + S     P+L++    + V   A G  H+A   + G
Sbjct: 267 VMIWGGGIGCLVGIVNERFVQPRIYS---LVPKLLESTAMLDVHNIALGGKHAALATKQG 323

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
            V+ +G     ++  +       P ++  L   + + V CG YHTC LT  GE+YTWG N
Sbjct: 324 EVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWG-N 382

Query: 316 ENGCLGI---GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTW 371
           +  C  +   G       P+++ G      +D I  SI  V+CG  HTA +S  G++ T+
Sbjct: 383 DVCCADLLIEGRTRSQWIPQKLGGS-----LDGI--SISSVACGEWHTAIVSSCGRLFTY 435

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
           G     GTF        G LGHG+   Y  P  V     ++    +CG  HT A++E +
Sbjct: 436 G----DGTF--------GVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVM 482


>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
          Length = 12743

 Score =  112 bits (280), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 168/366 (45%), Gaps = 42/366 (11%)

Query: 43    WGNGDYGRLGLG--SLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
             WGN  Y  LG+   S+  R +P +   SA +  S+ +LA    H L L +   V+  G+N
Sbjct: 12218 WGNNGYASLGVSDTSIYQRSKPGLANISAIQPASIISLA-SYYHVLALDDKNRVWGWGMN 12276

Query: 99    DFGQLG--ISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
               GQLG    +N  Y+     L  LR      +++ IS GY HS A+   G ++ WG NS
Sbjct: 12277 WSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGSNS 12336

Query: 152   NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             +GQLG       ++PI   +  L+G     A      ++A+   G++ +WG    GRLG+
Sbjct: 12337 SGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRLGN 12396

Query: 212   GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
             G   S L    +T +        L   KV     G  H   +D+ G+V+ +G+ +  ++ 
Sbjct: 12397 GSSGSYLYLPTATDQ------SALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQL- 12449

Query: 272   FQEGNHARRPSLIS-KLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                GN +   SL+  K+  S       + V  G  ++ +L   G ++TWG N+ G LG G
Sbjct: 12450 ---GNGSTANSLVPVKVNLSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSLGTG 12506

Query: 324   SIDVLHSPERV-QGPFSESPVDQICTSIVLVSCGWKHTAAISEG-KILTWGWGGSHGTFS 381
             +   L++P  + Q  F+ + +  I            H  A+ E   + TWG+GG    + 
Sbjct: 12507 NRQSLYTPTLIDQSAFNGAVIHSIDAGNSF------HNLAMDESNNVWTWGYGG----YG 12556

Query: 382   EDGHSS 387
             E G+ S
Sbjct: 12557 EMGNGS 12562



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 84/319 (26%), Positives = 141/319 (44%), Gaps = 26/319 (8%)

Query: 43    WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLK------ALACGGAHTLFLTETGCVYAT 95
             WG    G+LG G+ ++ R+ PV     +  S++      A++ G  H+L L   G V+A 
Sbjct: 12273 WGMNWSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAW 12332

Query: 96    GLNDFGQLGISENIGYSLEPLRIS----GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
             G N  GQLG + N   SL P+ +        K V   +T Y  + A+   G+L+ WG N 
Sbjct: 12333 GSNSSGQLG-TNNTQRSLVPILVDLSPLAGAKVVAAKATDYF-NMALDESGQLWAWGDNR 12390

Query: 152   NGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
              G+LG G   + + +P  T    LS        +G    +A+   G+V +WG    G+LG
Sbjct: 12391 YGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQLG 12450

Query: 211   HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             +G  ++ L  ++         +  LEGV V+    G  +S  +D+ GR++ +G      +
Sbjct: 12451 NGSTANSLVPVKVN-------LSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSL 12503

Query: 271   LFQEGNHARRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
                       P+LI +  ++  V+        +H   +     ++TWG    G +G GS 
Sbjct: 12504 GTGNRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESNNVWTWGYGGYGEMGNGSY 12563

Query: 326   DVLHSPERVQGPFSESPVD 344
                  P  V+ P   +P +
Sbjct: 12564 SNSLLPIPVRIPVPSTPFE 12582



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)

Query: 18    IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKA 75
             I++G  L    R+ +          WG    G LG+G+ + ++ PV+   SA +  S+ A
Sbjct: 10933 IEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINA 10992

Query: 76    LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
             LA G A +L L + G +++ GLN++GQLGI     +S  + + +S L    +V I    H
Sbjct: 10993 LAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADH 11052

Query: 134   HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
             ++ A+  +G ++ WG+N  GQLG+     +++P+   +  L G
Sbjct: 11053 YAFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDLSVLGG 11095



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 30/308 (9%)

Query: 69    EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKE 124
             E   +++      H L L   G V+A G N  GQLG     +  +   ++P    G    
Sbjct: 11721 EGVKIESFVSSNDHYLALDHKGRVWAWGENYGGQLGNGTYDTPQVLQPIDPAAFHGAAIV 11780

Query: 125   VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-VIPIPTKVECLSGIFTKQAA 183
              +    G+  S A+   G+L+ WG N  GQLG+     +  IP+P  +  L G   K   
Sbjct: 11781 AIAAGEGF--SLALDDKGQLWAWGINDRGQLGVASTIYRSTIPVPADMSALGGTRIKTLQ 11838

Query: 184   LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVK 241
                +Q   +   G++ +WGA    R+G          + S S Y P  +   E+ G K  
Sbjct: 11839 AAGDQGYLLDELGRLWAWGA----RVGDWTG------MDSESAYAPVQVDLAEVSGGKAL 11888

Query: 242   IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARRPSLISKLPYSE-------E 292
               +AG  +   +DEN +V++ G+           +G +      ++++  S         
Sbjct: 11889 QMSAGNNYLLMLDENNQVWVLGNANNYSASSSSADGENNSDNPFLNRVDLSSLGDKSAIS 11948

Query: 293   VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVD-QICTSI 350
             +  G +H  +L   G +++WG N NG LG+  +    +P  V   +SE  P +  I    
Sbjct: 11949 ISAGSHHDLLLDDEGGIWSWGYNYNGELGVDGVYQTSTPIFVAKLYSEVLPAELHISEDT 12008

Query: 351   VLVSCGWK 358
             V +  G+K
Sbjct: 12009 VTIPMGYK 12016



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 84/341 (24%), Positives = 133/341 (39%), Gaps = 64/341 (18%)

Query: 111   YSLEPL---RISGLKKEVVQISTGY------------HHSSAITVDGELYMWGKNSNGQL 155
             Y+LEPL    IS    E+V+  T               + S + V   L+ WG N    L
Sbjct: 12167 YALEPLGHVEISNASMELVETKTLRCPRDDVKPFSVGSNFSLVAVGNTLWSWGNNGYASL 12226

Query: 156   GLGKKAAKVIPIPTKVECLSGIFTKQAA-----LGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             G+   +      P     L+ I   Q A       +   +A+    +V  WG   SG+LG
Sbjct: 12227 GVSDTSIYQRSKPG----LANISAIQPASIISLASYYHVLALDDKNRVWGWGMNWSGQLG 12282

Query: 211   HGQESSILGFLRSTSEYTP-----RLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGD 264
              G   +        + Y P       ++ +E     IA +AG+ HS  +D  GRV+ +G 
Sbjct: 12283 DGTYDN--------NRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGS 12334

Query: 265   RAVDKMLFQEGNHARRPSLISKLPYSEEVVCG----GYHTCVLTSGGELYTWGSNENGCL 320
              +  ++       +  P L+   P +   V       Y    L   G+L+ WG N  G L
Sbjct: 12335 NSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRL 12394

Query: 321   GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
             G GS     S   +  P +          +V    G  H  A+ + G++  W WG     
Sbjct: 12395 GNGS-----SGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQV--WAWG----- 12442

Query: 380   FSEDGHSSGGQLGHGNDVDYIHPTIVNF----GENVKALQV 416
                  ++S GQLG+G+  + + P  VN     G  V++++V
Sbjct: 12443 -----NNSYGQLGNGSTANSLVPVKVNLSALEGVGVQSVEV 12478



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)

Query: 121   LKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
             +K  V+++    H    + + +  +  L+ WG+NSNG+LG+G    +  P+ T +  L G
Sbjct: 10928 VKLHVIEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDG 10987

Query: 177   IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
                   A G   S+A+   G++ SWG    G+LG G  S+        S      +  L 
Sbjct: 10988 ASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAF-------SRPQEVDLSNLM 11040

Query: 237   GVKVKIAAAGFLHSACIDENGRVYIFG 263
             G ++    A   ++  +DENG V+ +G
Sbjct: 11041 GFRIVNIVAADHYAFALDENGNVWSWG 11067



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 5/125 (4%)

Query: 94    ATGLNDFGQLGIS----ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
             ATG     QL +S    +   Y +EP+  + L    + +++T   H+ AI   G+L+ WG
Sbjct: 11310 ATGTQYHLQLSMSSIYKKQYAYKVEPVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWG 11369

Query: 149   KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             KN+ GQLG G       P+         +     A+G + S+A+   G V SWG   SG 
Sbjct: 11370 KNTYGQLGNGSYDDITAPLTQDFSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGE 11429

Query: 209   LGHGQ 213
             LG G 
Sbjct: 11430 LGQGH 11434



 Score = 49.3 bits (116), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 3/136 (2%)

Query: 77    ACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
             A G  HTL L     ++A G N  G+LGI      Y+     IS L    +  ++ G   
Sbjct: 10941 AVGRYHTL-LWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINALAAGDAF 10999

Query: 135   SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
             S A+   G L+ WG N+ GQLG+G  +A   P    +  L G            + A+  
Sbjct: 11000 SLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFALDE 11059

Query: 195   GGKVLSWGAGGSGRLG 210
              G V SWG    G+LG
Sbjct: 11060 NGNVWSWGRNDLGQLG 11075



 Score = 45.4 bits (106), Expect = 0.057,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 9/115 (7%)

Query: 62    PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRIS 119
             PV  +  +  +L  +A   AH L +   G +++ G N +GQLG   N  Y     PL   
Sbjct: 11335 PVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWGKNTYGQLG---NGSYDDITAPLTQD 11391

Query: 120   GLKKEVV---QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
                K+ V    ++ G   S AI   G+++ WG N++G+LG G  +   +PIP  +
Sbjct: 11392 FSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQG-HSDWAVPIPVSI 11445



 Score = 41.6 bits (96), Expect = 0.86,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 15/130 (11%)

Query: 200   SWGAGGSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFLHSACIDENG 257
             +WG   +G LG G             +Y P +  I  L+G  +   AAG   S  +D+ G
Sbjct: 10957 AWGRNSNGELGIGNWQD---------QYAPVMTDISALDGASINALAAGDAFSLALDDRG 11007

Query: 258   RVYIFGDRAVDKMLFQEGNHARRPSLI--SKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
             R++ +G     ++     +   RP  +  S L       +V   ++   L   G +++WG
Sbjct: 11008 RLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFALDENGNVWSWG 11067

Query: 314   SNENGCLGIG 323
              N+ G LGI 
Sbjct: 11068 RNDLGQLGIA 11077


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 181/396 (45%), Gaps = 61/396 (15%)

Query: 55  SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
           SL S+   ++  A E      +  +ACGG H + +T  G +++ G    G+LG  +  ++
Sbjct: 271 SLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330

Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPI 167
            +      +SG   E+V  + G +H+ A+T+ G+LY WG  ++  G LG G + +  IP 
Sbjct: 331 SHPKIIDTLSGTNVELV--ACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQ 388

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
               + + GI     + G   +  VT  G++ ++G G  G LGHG           TS +
Sbjct: 389 KVSGQ-MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHI--------TSNF 439

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE---------------NGRVYIFGDRAVDKMLF 272
            PR ++ L G++    A G  H+A   E               + ++Y +GD   DK   
Sbjct: 440 -PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG--DKGRL 496

Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
             G++  R  P  ++ L      +V CG   T  LT+ G +YT GS   G LG  + +  
Sbjct: 497 GHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANG- 555

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSS 387
             P  V+G  + S V++       V+CG  H A + S+ ++ TWG G             
Sbjct: 556 KLPTCVEGEIANSFVEE-------VACGSYHVAVLTSKNEVYTWGKG------------L 596

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
            GQLGHG++     PTIV+  ++ +   V+CG   T
Sbjct: 597 NGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFT 632



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 145/343 (42%), Gaps = 43/343 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +       +++ +ACG  HT  +T +G +Y    G +++
Sbjct: 314 WGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNY 373

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P ++SG  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 374 GLLGHGSEVSHWI-PQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG 432

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
                    P +VE L G+ T + A G   + A                    K+ +WG 
Sbjct: 433 DHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGD 490

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG     L          P  +  L   ++   A G   +  +   GRVY  G
Sbjct: 491 GDKGRLGHGDNEPRL---------VPECVAALMEERICQVACGNDLTVALTTAGRVYTMG 541

Query: 264 DRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++     N  + P+ +       + EEV CG YH  VLTS  E+YTWG   NG L
Sbjct: 542 STAYGQLGSATAN-GKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           G G  +  ++P  V     +  V         V+CG K T  I
Sbjct: 601 GHGDNNHRNTPTIVD-VLKDKQVKN-------VACGSKFTVVI 635



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 56/284 (19%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +     A G   +V VT  G++ SWG    GRLGHG E+ +         
Sbjct: 280 LPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV--------- 330

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P++I  L G  V++ A G  H+  +  +G +Y +GD   +  L   G+      P  +
Sbjct: 331 SHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV 390

Query: 285 S------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           S      ++ Y   + CG +HT V+TS G+L+T+G    G LG G     + P  V+   
Sbjct: 391 SGQMEGIRVSY---ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLR 447

Query: 339 SESPVDQICTSIVLVSCGWKHTAAISEG----------------KILTWGWGGSHGTFSE 382
                         V+CG  HTAA  E                 K+ TWG G        
Sbjct: 448 G--------LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDK------ 493

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                 G+LGHG++   + P  V      +  QV+CG + T AL
Sbjct: 494 ------GRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVAL 531



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H+  +   G ++ +G+ +  ++          P +I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  ++  G LG GS +V H  P++V G       
Sbjct: 341 GTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGS-EVSHWIPQKVSGQMEG--- 396

Query: 344 DQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 +  +SCG  HTA + S G++ T+G G            S G LGHG+ +    P
Sbjct: 397 ----IRVSYISCGAWHTAVVTSAGQLFTFGDG------------SFGALGHGDHITSNFP 440

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V     ++  +V+CG  HT A +E +
Sbjct: 441 REVETLRGLRTTKVACGVWHTAAAVEAI 468


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 81  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 248

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 26/301 (8%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
            G   L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H  
Sbjct: 59  AGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIV 117

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
             T +GE++ WG N+  QLG G     ++P       LS     + A G   S+ +T  G
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 176

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDE 255
           +V +WG   SG++G G          + ++  PR +   L+   V   A G +    + +
Sbjct: 177 EVFAWGYNNSGQVGSGS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD 227

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
            G VY++G     ++      +   P  ++ L     + V CG  HT VLT  G++Y WG
Sbjct: 228 TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTW 371
           +N  G LG G+      P  V         D+I   I + +C   HT+A     G +  W
Sbjct: 288 ANSYGQLGTGNKSNQSYPTPVT-----VEKDRI---IEIAACHSTHTSAAKTQGGHVYMW 339

Query: 372 G 372
           G
Sbjct: 340 G 340



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 85  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 142

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 143 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 202

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 203 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 243

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 279



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362


>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 310

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 27/294 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +    V  A E +S++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P R+  L   ++ Q + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             +G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  ++E+GR+  +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                 P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG+G  D
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDND 286



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 134/332 (40%), Gaps = 38/332 (11%)

Query: 92  VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           + A G  + GQLGI  N       +  +LEP  +         + +G  +S AI  DG +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVR-------SVVSGSRNSLAICDDGTM 59

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG N  G LG  +   K   IP++V+ L+ +   QAA+G    +AV   G+  +WG  
Sbjct: 60  FTWGWNQRGTLGH-QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+ G       +G         P+  +    + V+  AAG  HS  +   G V+ +G 
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
                 + Q       P  +  L     +  G +H   L   G L  WG+NE G LG G 
Sbjct: 177 PWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 325 IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 384
                 P  VQG      +D + T + + + GW  TA   +G++  WG  G HG      
Sbjct: 233 TQPTSHPVPVQG------LDDL-TLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRLG--- 281

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
                 LG  +    + P  VN       +QV
Sbjct: 282 ------LGDNDKSSKMVPQKVNLLAEEDIIQV 307



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 124/295 (42%), Gaps = 46/295 (15%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG   +GQLG+G    K       VE L     +    G   S+A+   G + +WG 
Sbjct: 7   IIAWGSGEDGQLGIGTNEEK--EWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW 64

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G LGH  E+         +E  P  +K L  VK+  AA G  H   +D+ GR Y +G
Sbjct: 65  NQRGTLGHQPETK--------TENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116

Query: 264 DRAV-----DKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGS 314
                    + +  + G   RR  +I K    +    +V  GG H+ VLT  G ++TWG 
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGW 373
                   G I  +  P RVQG            ++ L++ G  H  A+ E G++L WG 
Sbjct: 177 P----WPPGDIKQISVPVRVQG----------LENVRLIAVGAFHNLALEEDGRLLAWG- 221

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                      ++  GQLG G+     HP  V   +++  + ++ G  H+ AL +
Sbjct: 222 -----------NNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTD 265



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           PV     E  +++ +A G  H L L E G + A G N++GQLG  +    S  P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGL 245

Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
               +V I+ G  HS+A+T  GE+Y WG+  +G+LGLG        +P KV  L+
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLA 300



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN +YG+LG G  +    PV     +  +L  +A GG H+  LT+ G VY  G  + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279

Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQI 128
           LG+ +N   S + P +++ L +E ++Q+
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQV 307


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 157/326 (48%), Gaps = 35/326 (10%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     + +   + +  ++G+ ++G+LGLGS     +P    A +
Sbjct: 28  SKFWFKNDIPMYLSCGDEHTAVVTGNNKLY--MFGSNNWGQLGLGSKSDVKKPTCVKALK 85

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQ 127
              ++  ACG  HTL LT  G VYA G N+ GQLG+ +    +    RIS    E  + Q
Sbjct: 86  PEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTF-HRISFFTSEHNIKQ 144

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           +S G + S+A++ DG L+MWG NS GQ+GL    +  +P    +    G      + G+ 
Sbjct: 145 LSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNI----GKPISWISCGYY 200

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S  VT  G++ ++G   SG+LG  +E  I       +  TP+L+  +    +++A  G 
Sbjct: 201 HSAFVTMDGELYTFGEPESGKLGLPKELLI-------NHRTPQLVAGIPEKVIQVACGGG 253

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGN--------HARRPSLISKLPYSE--EVVCGG 297
            H+  + E   VY FG       L Q G             P +I ++   +   + CG 
Sbjct: 254 -HTVVLTEKA-VYTFG-------LGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGE 304

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
            HT +++  G +YT+G   +G LG+G
Sbjct: 305 NHTALISDIGLMYTFGDGRHGKLGLG 330



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 163/350 (46%), Gaps = 44/350 (12%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G     + ++G V+      FG+   +EN+     P +        + +S G  H++ +T
Sbjct: 2   GEPETLVPDSGAVFT-----FGKTKFAENM-----PSKFWFKNDIPMYLSCGDEHTAVVT 51

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            + +LYM+G N+ GQLGLG K+   +  PT V+ L     + AA G   ++ +T  G V 
Sbjct: 52  GNNKLYMFGSNNWGQLGLGSKSD--VKKPTCVKALKPEKVQFAACGRNHTLILTVVGNVY 109

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           + G    G+LG G       F R +   +   IK+L        +AG   SA + E+GR+
Sbjct: 110 AAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQL--------SAGSNTSAALSEDGRL 161

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +++GD +  ++   +      P  ++       + CG YH+  +T  GELYT+G  E+G 
Sbjct: 162 FMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWISCGYYHSAFVTMDGELYTFGEPESGK 221

Query: 320 LGIGSIDVLH--SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           LG+    +++  +P+ V G         I   ++ V+CG  HT  ++E  + T+G G   
Sbjct: 222 LGLPKELLINHRTPQLVAG---------IPEKVIQVACGGGHTVVLTEKAVYTFGLG--- 269

Query: 378 GTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                      GQLG G    + + P ++   +N K   +SCG NHT  +
Sbjct: 270 ---------QFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALI 310



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 148/315 (46%), Gaps = 41/315 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+        +P  +  LK E VQ +  G +H
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVK-KPTCVKALKPEKVQFAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +  +TV G +Y  G N+ GQLGLG    +          +S  FT     KQ + G   S
Sbjct: 99  TLILTVVGNVYAAGGNNEGQLGLGDTEER-----NTFHRIS-FFTSEHNIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A++  G++  WG    G++G     S+           P  +    G  +   + G+ H
Sbjct: 153 AALSEDGRLFMWGDNSEGQIGLNDVISVC---------VPHQVNI--GKPISWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG+    K+   +    NH R P L++ +P    +V CGG HT VLT 
Sbjct: 202 SAFVTMDGELYTFGEPESGKLGLPKELLINH-RTPQLVAGIPEKVIQVACGGGHTVVLTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAIS 364
              +YT+G  + G LG+G+        +V        ++QI    I  +SCG  HTA IS
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFCFETLEPKV--------IEQIKNQKITYISCGENHTALIS 311

Query: 365 E-GKILTWGWGGSHG 378
           + G + T+G  G HG
Sbjct: 312 DIGLMYTFG-DGRHG 325



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 38/250 (15%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S +           P  +K L+  KV+ AA
Sbjct: 43  GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDV---------KKPTCVKALKPEKVQFAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLPYSEEVVCGGYHTC 301
            G  H+  +   G VY  G     ++     +E N   R S  +     +++  G   + 
Sbjct: 94  CGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSA 153

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L+  G L+ WG N  G +G+  +  +  P +V           I   I  +SCG+ H+A
Sbjct: 154 ALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQV----------NIGKPISWISCGYYHSA 203

Query: 362 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSC 418
            ++ +G++ T+G   S            G+LG   +  +++  P +V  G   K +QV+C
Sbjct: 204 FVTMDGELYTFGEPES------------GKLGLPKELLINHRTPQLV-AGIPEKVIQVAC 250

Query: 419 GFNHTGALLE 428
           G  HT  L E
Sbjct: 251 GGGHTVVLTE 260



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P++CS F + +++ +ACGG  TL       +   G NDF
Sbjct: 319 FGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGCQTLVFAAPR-IDVVGENDF 377

Query: 101 GQLG 104
            Q+ 
Sbjct: 378 NQIN 381



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 30/178 (16%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + ++G V+ FG     K  F E N   +    + +P    + CG  HT V+T   +LY +
Sbjct: 8   VPDSGAVFTFG-----KTKFAE-NMPSKFWFKNDIPMY--LSCGDEHTAVVTGNNKLYMF 59

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           GSN  G LG+GS   +  P  V+    E         +   +CG  HT       ILT  
Sbjct: 60  GSNNWGQLGLGSKSDVKKPTCVKALKPE--------KVQFAACGRNHTL------ILTVV 105

Query: 373 WGGSHGTFSEDGHSSGGQLGHGN--DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                G     G ++ GQLG G+  + +  H  I  F       Q+S G N + AL E
Sbjct: 106 -----GNVYAAGGNNEGQLGLGDTEERNTFH-RISFFTSEHNIKQLSAGSNTSAALSE 157


>gi|116328469|ref|YP_798189.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116121213|gb|ABJ79256.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
          Length = 506

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 133/299 (44%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +        + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S+ P+ + GL  +V+Q+  G  HS+A+T  GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLS-DVIQVIAGSEHSAALTKSGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A   +   P KVE LSGI  KQ A G +  +A+   G++ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L         AG   S  I +NG V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H   L   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 159/367 (43%), Gaps = 42/367 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AIT +G +Y WG N+ GQLG+G         +AA     PT V  ++       A GF
Sbjct: 190 SMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G        L + S    P  +  L  V   I  A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLSDVIQVI--A 300

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ++G VY++G      +    L         P  +  L   +++  G  H  
Sbjct: 301 GSEHSAALTKSGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L S G +Y+WG N +G LGIG      SP     P   + V  I  +  + + G +  +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNP---TQVLNITNASSIWAGGTQSFS 414

Query: 362 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGF 420
            +  G++  WG          +G+++   +G  N +    P     G +NV  +   CG 
Sbjct: 415 ILKNGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGA 463

Query: 421 NHTGALL 427
            H  ALL
Sbjct: 464 THNFALL 470



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           S IF+    + F Q  S+A+T  G+V +WG    G+LG G  ++     R+     P  +
Sbjct: 178 SNIFS----IHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233

Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
             + G+   +  A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +     +  +P +V+G      
Sbjct: 292 LSDVIQVIAGSEHSAALTKSGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG------ 345

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                + I  ++ G  H  A+ S+G+I +WG   S
Sbjct: 346 ----LSGIKQIANGRDHILALASDGRIYSWGLNAS 376



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 149/348 (42%), Gaps = 35/348 (10%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  ++G+LG G S       V+       ++ ++     +++ +T+ G VY  G N  GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAITKNGRVYTWGNNAKGQ 209

Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           LGI  N          G    P  + G+   V+  + G++H+  +  DG +  +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268

Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           QLG G     A      P  V  LS +   Q   G E S A+T  G+V  WG    G LG
Sbjct: 269 QLGNGANDLNADSFSMNPVAVVGLSDVI--QVIAGSEHSAALTKSGEVYVWGRNQYGNLG 326

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G+ S+      +  + TP  ++ L G+K    A G  H   +  +GR+Y +G  A  ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASDGRIYSWGLNASGQL 379

Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC-LGIGSID 326
                   N    P+ +  +  +  +  GG  +  +   GE+  WG+N N   L IG  +
Sbjct: 380 GIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGW 373
            L   E  +             +++   CG  H  A +  G+I  WGW
Sbjct: 440 TLKVYEPNKAVVG-------IDNVIHFGCGATHNFALLGNGEIYGWGW 480



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L +    +  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P     L       I  G   S +I  +GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K V  +  +       G   + A+ G G++  WG    G LG 
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGNGEIYGWGWNFKGSLGR 488


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 170/377 (45%), Gaps = 61/377 (16%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACG  H   +T  G V++ G    G+LG  +  ++ +   P  I  L    VQ ++
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAH---PQLIDSLASSTVQYVA 181

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
            G +HS A+T  G+LY WG  ++  G LG G   +   P       L G+     A G  
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGP-LEGVRVSSVACGPW 240

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +V VT  G++ S+G G  G LGHG   S            PR ++ L+G+K   AA G 
Sbjct: 241 HTVLVTSTGQLFSFGDGTFGVLGHGDRKSA---------SMPREVESLKGLKTLRAACGP 291

Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
            H+A + E            +G+++ +GD   +++   +      P+ ++ L      +V
Sbjct: 292 WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQICTSI 350
            CG   T  LT+ G LYT GS   G LG         P+   R+ G           T I
Sbjct: 352 ACGHSLTVALTTTGHLYTMGSVSYGQLG--------DPQATGRLPGVLRLGR-----TLI 398

Query: 351 VLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
             VSCG  H AA+ S+G + TWG G +            G+LGHG+  D   P++V    
Sbjct: 399 EEVSCGAYHVAALTSKGDVCTWGKGAN------------GRLGHGDAEDRDVPSLVEALR 446

Query: 410 NVKALQVSCGFNHTGAL 426
           + +  +VSCG + T A+
Sbjct: 447 DKQVKKVSCGSSFTSAI 463



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 131/308 (42%), Gaps = 50/308 (16%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           V GEL+MWG+      G  K          +P  V  L  +  +Q A G   +  VT  G
Sbjct: 83  VFGELWMWGEGIGDGGGTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHAALVTRQG 142

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V SWG    GRLGHG ++ +           P+LI  L    V+  A G  HS  + ++
Sbjct: 143 EVFSWGEESGGRLGHGVDADVA---------HPQLIDSLASSTVQYVACGEYHSCAVTQS 193

Query: 257 GRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
           G +Y +GD   +  L   GN+      +R     +      V CG +HT ++TS G+L++
Sbjct: 194 GDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFS 253

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE------ 365
           +G    G LG G       P  V+       +  + T  +  +CG  HTAA+ E      
Sbjct: 254 FGDGTFGVLGHGDRKSASMPREVES------LKGLKT--LRAACGPWHTAAVVEVMSRYS 305

Query: 366 -------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 418
                  GK+ TWG G  +            +LGHG+    + PT V    +    QV+C
Sbjct: 306 NAGSSLSGKLFTWGDGDKN------------RLGHGDKEQKLVPTCVAALVDHNFRQVAC 353

Query: 419 GFNHTGAL 426
           G + T AL
Sbjct: 354 GHSLTVAL 361



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 24/212 (11%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T  + PR ++ L  + V+  A G  H+A +   G V+ +G+ +  ++          P L
Sbjct: 109 TDAFLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQL 168

Query: 284 ISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFS 339
           I  L  S  + V CG YH+C +T  G+LYTWG  ++  G LG G+     +P+RV GP  
Sbjct: 169 IDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLE 228

Query: 340 ESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
                     +  V+CG  HT  + S G++ ++G     GTF        G LGHG+   
Sbjct: 229 G-------VRVSSVACGPWHTVLVTSTGQLFSFG----DGTF--------GVLGHGDRKS 269

Query: 399 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 430
              P  V   + +K L+ +CG  HT A++E +
Sbjct: 270 ASMPREVESLKGLKTLRAACGPWHTAAVVEVM 301



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 4/150 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG G  E +  P   +A   H+ + +ACG + T+ LT TG +Y  G   +GQ
Sbjct: 318 WGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQ 377

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +  G     LR+   +  + ++S G +H +A+T  G++  WGK +NG+LG G   A
Sbjct: 378 LGDPQATGRLPGVLRLG--RTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGD--A 433

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +   +P+ VE L     K+ + G   + A+
Sbjct: 434 EDRDVPSLVEALRDKQVKKVSCGSSFTSAI 463



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-E 365
           GEL+ WG       G   +D      R       +    +   +  ++CG +H A ++ +
Sbjct: 85  GELWMWGEGIGDGGGTKKLDTSF---RTDAFLPRAVRSLVVLDVQQIACGVRHAALVTRQ 141

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G++ +WG              SGG+LGHG D D  HP +++   +     V+CG  H+ A
Sbjct: 142 GEVFSWG------------EESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCA 189

Query: 426 LLE 428
           + +
Sbjct: 190 VTQ 192


>gi|149044295|gb|EDL97616.1| rCG42876 [Rattus norvegicus]
          Length = 637

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 30/263 (11%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K D+ +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +         IG+   P  I   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G     
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G+  S  VT    V ++G G  G+LG G       FL  TSE  P++I  ++  K+ 
Sbjct: 233 ISCGYYHSAFVT-KKVVYAFGLGQFGQLGLGT------FLFETSE--PKIIDRIKDQKIS 283

Query: 242 IAAAGFLHSACIDENGRVYIFGD 264
             + G  H+A + + G +Y FGD
Sbjct: 284 HISCGENHTALMTDIGLMYTFGD 306



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 172/385 (44%), Gaps = 47/385 (12%)

Query: 50  RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
           R G G L    RP  V  + F K +    A  G       + +TG V+      FG+   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP  I       +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
                  + CG YH+  +T    +Y +G  + G LG+G+     S  ++        +D+
Sbjct: 226 VGKPISWISCGYYHSAFVTKK-VVYAFGLGQFGQLGLGTFLFETSEPKI--------IDR 276

Query: 346 ICTS-IVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
           I    I  +SCG  HTA +++ G + T+G  G HG            LG  N  +   PT
Sbjct: 277 IKDQKISHISCGENHTALMTDIGLMYTFG-DGRHGKLG---------LGMENFTNQFFPT 326

Query: 404 IV-NFGE-NVKALQVSCGFNHTGAL 426
           +  NF +  V+  + SC  +  G L
Sbjct: 327 LCSNFLKFTVQLERPSCSASMVGTL 351



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 49/255 (19%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G     PS I K     ++ 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT--PSDIIK-----QLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V           +   I  +S
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT----------VGKPISWIS 234

Query: 355 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKA 413
           CG+ H+A +++  +  +G G              GQLG G  + +   P I++  ++ K 
Sbjct: 235 CGYYHSAFVTKKVVYAFGLG------------QFGQLGLGTFLFETSEPKIIDRIKDQKI 282

Query: 414 LQVSCGFNHTGALLE 428
             +SCG NHT  + +
Sbjct: 283 SHISCGENHTALMTD 297



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 96/235 (40%), Gaps = 53/235 (22%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRV 259
           WG GG G+           +LR          K+    ++  AA G     + + + G V
Sbjct: 7   WGTGGLGQ-----------YLRPNRVAPAVFPKQ---AQIPFAAFGMAEPESLVPDTGAV 52

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSN 315
           + FG     K  F E       ++ SK  +  +V     CG  HT ++T   +LY +GSN
Sbjct: 53  FTFG-----KTKFAE-------NIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSN 100

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGG 375
             G LG+GS   +  P  ++    E         + L +CG  HT       +++   GG
Sbjct: 101 NWGQLGLGSKSAISKPTCIKALKPE--------KVKLAACGRNHT-------LVSTDTGG 145

Query: 376 SHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            +      G ++ GQLG G  +D D  H  I  F  +    Q+S G N + AL E
Sbjct: 146 VYAA----GGNNEGQLGLGDTDDRDTFH-QIGFFTPSDIIKQLSAGANTSAALTE 195



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)

Query: 27  CKRWISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           C  + S+ + ++    +G G +G+LGLG+ L     P +    +   +  ++CG  HT  
Sbjct: 235 CGYYHSAFVTKKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTAL 294

Query: 86  LTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
           +T+ G +Y  G    G+LG+  EN      P   S   K  VQ+
Sbjct: 295 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQL 338


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 129/274 (47%), Gaps = 58/274 (21%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG+N NGQLGLG     ++P   K++   GI  K  A G E + AVT  G++  WG G  
Sbjct: 1   WGRNQNGQLGLGTTEDSLVP--QKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G LG G  +  L          P+ +  ++G K+ + A G+ H+  +   G +Y +G   
Sbjct: 59  GNLGLGDRNDRL---------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 109

Query: 264 ----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTW 312
                     DR V   L      A R   IS+       + GG+ HT  LT+ G+LY W
Sbjct: 110 YGQLGHGDFEDRLVPHRL-----EALRGDNISQ-------ISGGWRHTMALTTDGKLYGW 157

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGK-ILTW 371
           G N+ G +G G  D +     +Q  F   P DQ    ++ +SCGW+HT A+++ + + +W
Sbjct: 158 GWNKFGQVGAG--DNIDHCSPIQIKF---PQDQ---KVIQISCGWRHTLAVTDKQNVFSW 209

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           G G            + GQLGHG  VD   P I+
Sbjct: 210 GRG------------TNGQLGHGESVDRNTPMIL 231



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 17/221 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG LGLG    R  P   S+ +   +  +ACG  HT+ ++  G +Y  G + +GQ
Sbjct: 53  WGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 112

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +     L P R+  L+ + + QIS G+ H+ A+T DG+LY WG N  GQ+G G   
Sbjct: 113 LGHGD-FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               PI  K      +   Q + G+  ++AVT    V SWG G +G+LGHG+        
Sbjct: 172 DHCSPIQIKFPQDQKVI--QISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGE-------- 221

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYI 261
            S    TP +   LE + V   +   + S+ ID  +G+ ++
Sbjct: 222 -SVDRNTPMI---LEALSVDGCSGQQIESSNIDPSSGKTWV 258



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 32/231 (13%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG   +G+LG G     L          P+ I+  EG+ +K+ AAG  H+A + E+G ++
Sbjct: 1   WGRNQNGQLGLGTTEDSL---------VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELF 51

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENG 318
            +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT+G ++ G
Sbjct: 52  GWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 111

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSH 377
            LG G  +    P R++    ++        I  +S GW+HT A++ +GK+  WGW    
Sbjct: 112 QLGHGDFEDRLVPHRLEALRGDN--------ISQISGGWRHTMALTTDGKLYGWGW---- 159

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                   +  GQ+G G+++D+  P  + F ++ K +Q+SCG+ HT A+ +
Sbjct: 160 --------NKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTD 202



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 13/222 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ E    P    AFE  S+K +A G  HT  +TE G ++  G   +G 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +     L P ++S +   ++V ++ G+ H+ +++  G LY +G +  GQLG G   
Sbjct: 61  LGLGDR-NDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFE 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  +P ++E L G    Q + G+  ++A+T  GK+  WG    G++G G         
Sbjct: 120 DRL--VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-------- 169

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +    +P  IK  +  KV   + G+ H+  + +   V+ +G
Sbjct: 170 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWG 210



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 18/236 (7%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+      SL P +I   +   +  ++ G  H++A+T DGEL+ WG    G 
Sbjct: 2   GRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LGLG +  +++P   KV  + G      A G+  +++V+  G + ++G    G+LGHG  
Sbjct: 61  LGLGDRNDRLVP--QKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
              L          P  ++ L G  +   + G+ H+  +  +G++Y +G     ++   +
Sbjct: 119 EDRL---------VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 169

Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
                 P  I K P  ++V+   CG  HT  +T    +++WG   NG LG G S+D
Sbjct: 170 NIDHCSPIQI-KFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVD 224


>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
           (POZ) domain containing protein 1 [Oryctolagus
           cuniculus]
          Length = 531

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 143/328 (43%), Gaps = 76/328 (23%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS  +  DGE+Y WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V +WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  V     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVMVE-KERVVE-- 288

Query: 347 CTSIVLVSCGWKHTAAISE--GKILTWG 372
                + +C   HT+A     G +  WG
Sbjct: 289 -----IAACHSAHTSAAKTQGGHVYMWG 311



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G VYA G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHVMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 143/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T   E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G VY +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  V   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHVMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSAHTSA 299



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+ VL
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE+Y WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYAWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  +   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
          Length = 537

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 21/271 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     + +L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 60  LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G  A +  P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            +V  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP  +  L GV +   A G+ H+  + + G +Y +G     ++    GN + + S +  +
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPLQIM 286

Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
              E VV    C   HT    T  G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L+  G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P R+S     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   P +V  L G+   Q A G+  ++A+T  G + +WGA   G+LG G +S+ L 
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
            L        +++ E E V V+IAA    H SA   ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 40/320 (12%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +   T + E++++G N +  LG G   + ++P   K+E
Sbjct: 19  LSPQEIASIRKACV-FGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVP--KKLE 75

Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
            L G   K ++L +      +  T  G+V +WG  G  +LG+G          +    TP
Sbjct: 76  ALCG--KKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGA---------TNQGVTP 124

Query: 230 -RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
            ++   L   KV   A G  HS  +  +G +Y +G     ++      +   P  +S   
Sbjct: 125 VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCL 184

Query: 289 YSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
             + VV   CG   +  + + GE+Y WG N NG LG+G+     +P RV      + +  
Sbjct: 185 QDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRV------AALHG 238

Query: 346 ICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           +C  I+ ++CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +
Sbjct: 239 VC--ILQIACGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPLQI 285

Query: 406 NFGENVKALQVSCGFNHTGA 425
              +       +C   HT A
Sbjct: 286 MMEKERVVEIAACHSAHTSA 305



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  P   +A     +  +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L PL+I   K+ VV+I+  +  H S+A T  G++YMWG+   GQ      
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322

Query: 161 AAKVIPIPTKVECLSGIF 178
            + V+P  T   C   +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++  T   +V  +G   S  LG G   S +          P+ ++ L G K+   + G 
Sbjct: 39  EAIYTTHNDEVFVFGLNCSNCLGTGDSQSTI---------VPKKLEALCGKKISSLSYGS 89

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     L    EV CG +H+  L
Sbjct: 90  GPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL 149

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AA 362
           +  G+LY WG N  G +G GS     +P RV     +  V       V ++CG   + A 
Sbjct: 150 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMV-------VGIACGQTSSMAV 202

Query: 363 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
           ++ G++  WG+ G+            GQLG GN+ + + P  V     V  LQ++CG+ H
Sbjct: 203 VNNGEVYGWGYNGN------------GQLGLGNNGNQLTPCRVAALHGVCILQIACGYAH 250

Query: 423 TGALLE 428
           T AL +
Sbjct: 251 TLALTD 256


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 163/393 (41%), Gaps = 40/393 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G+  +R  PV        ++ A+A G  H+L +T  G V A G N  GQ
Sbjct: 65  WGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQ 124

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       S  P+ +       V  ++ G  HS A+T  G +  WG N  GQL  G   
Sbjct: 125 LGDGTTTPRS-TPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTT 183

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  V+  +G      A G   S+A+T  G VL+WGA  SG+LG G         
Sbjct: 184 TNSS-TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGT-------- 234

Query: 222 RSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            +T   TP  +    G     IAA+   HS  +   G +  +G     ++   +G    R
Sbjct: 235 -TTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQL--GDGTITNR 291

Query: 281 PSLIS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + ++  LP    V     G  H+  +TS G +  WG N +G LG GS     +P  V  
Sbjct: 292 STPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDL 351

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           P          T++  V+ G  H+ A+ S G +L WG+  S            GQLG G 
Sbjct: 352 PAG--------TTVTAVAGGAGHSLALTSTGTMLAWGFNTS------------GQLGDGT 391

Query: 396 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
             +   P   +   +     ++ G  H+ A++ 
Sbjct: 392 TSNRSTPIATDLPADTTITAIAGGSFHSLAVVP 424



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 117/305 (38%), Gaps = 40/305 (13%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S+A    G    WG N+  QLG G    +  P+   V+  +       A G   S+AVT 
Sbjct: 53  SAAAGPPGTGLAWGDNAESQLGDGTTTNRSTPV--TVDLPADTTITAVAAGQGHSLAVTS 110

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G VL+WGA  SG+LG G          +T   TP  +    G  V   AAG  HS  + 
Sbjct: 111 AGTVLAWGANSSGQLGDGT---------TTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVT 161

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
             G V  +G     ++            ++  LP    V     G  H+  LTS G +  
Sbjct: 162 STGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLA 221

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           WG+N +G LG G+     +P  V  P   +          + +    H+ A+ S G +L 
Sbjct: 222 WGANSSGQLGDGTTTPRSTPVAVDLPAGTT-------ISTIAASSSSHSLAVTSTGTMLA 274

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH------TG 424
           WG       F+       GQLG G   +   P  V+         V+ G  H      TG
Sbjct: 275 WG-----ANFT-------GQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTG 322

Query: 425 ALLEY 429
            +L +
Sbjct: 323 TMLAW 327


>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
          Length = 355

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
           TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++ 
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282

Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           K    E   C   HT    T GG +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKVCV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSAHTSA 299



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N       +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ H
Sbjct: 197 LDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250


>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
 gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
           1279]
          Length = 593

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 151/342 (44%), Gaps = 43/342 (12%)

Query: 2   LGRSLTAMTKYYLKQDIKLGSKLGIC---KRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
           LGR+ T+ +     Q   +   + I       I+ T   R   L G  DYG+LG G  +S
Sbjct: 253 LGRATTSPSDSTPTQASLINDAVSISLGEYHAIALTNDGRVVTL-GRDDYGQLGDGPGDS 311

Query: 59  R---WRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
                 P +        +KA+A   G  H+L LT  G VYA G ND GQLG+        
Sbjct: 312 SGTHTAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQE 371

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKV 171
            P  I GL  +V+ ++ G  H+ A+  DG ++ WG N NG+LG G     + P  +PT V
Sbjct: 372 SPALIPGLS-DVIALAAGDDHTLALKADGSVWAWGDNPNGELGTGD----ITPYSVPTAV 426

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L G+  K  A G   SVA+   G V +WG    G+LG+G           T+   P  
Sbjct: 427 SNLPGV--KAIAAGGNHSVALLADGTVRTWGYNNHGQLGNGSN---------TNSNVPVP 475

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARR-----PSLIS 285
           +  L  V V IAA G+  +  +  NG V  +G D +     FQ GN A       P  + 
Sbjct: 476 VTGLTDV-VGIAA-GYEFTLAVLSNGSVKAWGHDDS-----FQLGNGATTGDQTTPVDVQ 528

Query: 286 KLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +P    V     G +H   L   G +  WGSN  G LG G+
Sbjct: 529 GIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDGT 570



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 163/379 (43%), Gaps = 46/379 (12%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           +R  P+       ++L   A GG  +  +   G V++ G N +GQLG +        P +
Sbjct: 211 TRTAPLTLRVLRANTL---AAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQ 267

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK---KAAKVIPIPTKVECL 174
            S L  + V IS G +H+ A+T DG +   G++  GQLG G          P        
Sbjct: 268 AS-LINDAVSISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILP 326

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           +GI       G   S+A+T  G V +WG    G+LG       LG + +  E +P LI  
Sbjct: 327 AGIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLG-------LGTITAPQE-SPALIPG 378

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
           L    V   AAG  H+  +  +G V+ +GD    ++   +      P+ +S LP  + + 
Sbjct: 379 LS--DVIALAAGDDHTLALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPGVKAIA 436

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
            GG H+  L + G + TWG N +G LG GS    + P  V G           T +V ++
Sbjct: 437 AGGNHSVALLADGTVRTWGYNNHGQLGNGSNTNSNVPVPVTG----------LTDVVGIA 486

Query: 355 CGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVN---FGE 409
            G++ T A +S G +  W            GH    QLG+G    D   P  V     G 
Sbjct: 487 AGYEFTLAVLSNGSVKAW------------GHDDSFQLGNGATTGDQTTPVDVQGIPTGR 534

Query: 410 NVKALQVSCGFNHTGALLE 428
           +V+ L  + G  H  ALL+
Sbjct: 535 SVRGL--TAGIFHALALLD 551



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 149/345 (43%), Gaps = 45/345 (13%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LG  +   S   P   S        +++ G  H + LT  G V   G +D+G
Sbjct: 245 WGDNTYGQLGRATTSPSDSTPTQASLINDA--VSISLGEYHAIALTNDGRVVTLGRDDYG 302

Query: 102 QLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           QLG           + N+  ++ P   +G+K   VQ   G +HS A+T +G +Y WG+N 
Sbjct: 303 QLGDGPGDSSGTHTAPNLRDNILP---AGIKAVAVQ--AGRYHSLALTSEGTVYAWGRND 357

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLGLG   A     P  +  LS +    A  G + ++A+   G V +WG   +G LG 
Sbjct: 358 VGQLGLGTITAPQ-ESPALIPGLSDVIALAA--GDDHTLALKADGSVWAWGDNPNGELGT 414

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G           T    P  +  L GVK    AAG  HS  +  +G V  +G     ++ 
Sbjct: 415 GDI---------TPYSVPTAVSNLPGVKA--IAAGGNHSVALLADGTVRTWGYNNHGQLG 463

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHS 330
                ++  P  ++ L     +  G   T  + S G +  WG +++  LG G+      +
Sbjct: 464 NGSNTNSNVPVPVTGLTDVVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQTT 523

Query: 331 PERVQGPFSESPVDQICT--SIVLVSCGWKHT-AAISEGKILTWG 372
           P  VQG         I T  S+  ++ G  H  A + +G ++ WG
Sbjct: 524 PVDVQG---------IPTGRSVRGLTAGIFHALALLDDGSMVAWG 559



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 6/175 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G LG G +     P   S      +KA+A GG H++ L   G V   G N+ GQ
Sbjct: 404 WGDNPNGELGTGDITPYSVPTAVSNLP--GVKAIAAGGNHSVALLADGTVRTWGYNNHGQ 461

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N   ++ P+ ++GL  +VV I+ GY  + A+  +G +  WG + + QLG G    
Sbjct: 462 LGNGSNTNSNV-PVPVTGLT-DVVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTG 519

Query: 163 KVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                P  V+ + +G   +    G   ++A+   G +++WG+   G+LG G  +S
Sbjct: 520 DQT-TPVDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDGTPNS 573



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 37/184 (20%)

Query: 257 GRVYIFGDRAVDKMLFQ------EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
           G V +  DR V + ++        GN  R   L  ++  +  +  GGY +  +   G+++
Sbjct: 184 GPVTLSVDRTVPEGVYNLIVQASSGNLTRTAPLTLRVLRANTLAAGGYFSAAIKPNGQVW 243

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD-QICTSIVLVSCGWKHTAAIS-EGKI 368
           +WG N  G LG               P   +P    +    V +S G  H  A++ +G++
Sbjct: 244 SWGDNTYGQLG----------RATTSPSDSTPTQASLINDAVSISLGEYHAIALTNDGRV 293

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGEN-----VKALQVSCGFNH 422
           +T G          D +   GQLG G  D    H T  N  +N     +KA+ V  G  H
Sbjct: 294 VTLG---------RDDY---GQLGDGPGDSSGTH-TAPNLRDNILPAGIKAVAVQAGRYH 340

Query: 423 TGAL 426
           + AL
Sbjct: 341 SLAL 344


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 165/368 (44%), Gaps = 39/368 (10%)

Query: 14  LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           L+ D+ L      C  R ++ T ++     WG    GRLG G+     RP +  +     
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309

Query: 73  LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
           +  ++CG  HT  +T +G ++    G  + G LG    + Y L P ++SG  +  +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  HS+  T  G+LY +G  + G LG G +  + +  P +VE LSG  T + A G   
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426

Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           S A+      TG      K+ +WG G   RLGHG +   L          P+ ++ L   
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
                A G   +  +  +GRV+  G  + +  L    +  ++P L+     SE   E+ C
Sbjct: 478 DFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSC 355
           G  H  VLTS  E+YTWG   NG LG G +      +R +    E+  D+   SI   SC
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHGDLK-----DRKKPCLVEALKDRHVKSI---SC 588

Query: 356 GWKHTAAI 363
           G   T  I
Sbjct: 589 GSNFTTCI 596



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 162/375 (43%), Gaps = 57/375 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           +  +ACG  H    T  G V+  G    G+LG   +   S  P  +  L   VV  IS G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADIS-RPKLVESLSLTVVDLISCG 316

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
             H+ A+T  G+L+ WG  S   G LG G + +    +P KV   L G+     A G   
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVS--YWLPKKVSGPLEGLQVLSVACGSWH 374

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S   T  GK+ ++G G  G LGHG         R T  Y P+ ++ L G K    A G  
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGD--------RETLAY-PKEVEALSGFKTIKVACGIW 425

Query: 249 HSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYS-EE 292
           HSA I E          + ++Y +GD   +++    G+  + P L+ K     L Y   +
Sbjct: 426 HSAAIVEVTNQTGANVMSKKLYTWGDGDKNRL----GHGDKEPRLVPKCVQALLEYDFHQ 481

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           + CG   T  L + G ++T GS+ NG LG    D    P  VQ   +   V++I      
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDG-KQPCLVQDRLASELVEEI------ 534

Query: 353 VSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            SCG  H T   S  ++ TWG G +            G+LGHG+  D   P +V   ++ 
Sbjct: 535 -SCGASHVTVLTSRSEVYTWGMGAN------------GRLGHGDLKDRKKPCLVEALKDR 581

Query: 412 KALQVSCGFNHTGAL 426
               +SCG N T  +
Sbjct: 582 HVKSISCGSNFTTCI 596



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 128/307 (41%), Gaps = 52/307 (16%)

Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           G++Y+WG+       S+G          V+ IP  +E    +   Q A G       T  
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG    GRLGHG ++ I           P+L++ L    V + + G  H+  +  
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
           +G ++ +GD + +  L   G       P  +S      +V+   CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE----- 365
           T+G    G LG G  + L  P+ V+               + V+CG  H+AAI E     
Sbjct: 386 TFGDGTFGVLGHGDRETLAYPKEVEALSG--------FKTIKVACGIWHSAAIVEVTNQT 437

Query: 366 ------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
                  K+ TWG G  +            +LGHG+    + P  V         Q++CG
Sbjct: 438 GANVMSKKLYTWGDGDKN------------RLGHGDKEPRLVPKCVQALLEYDFHQLACG 485

Query: 420 FNHTGAL 426
            N T AL
Sbjct: 486 HNMTVAL 492



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 24/205 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H A     G V+ +G+    ++         RP L+  L 
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  + + CG +HTC +T+ G+L+ WG  S   G LG G+      P++V GP       
Sbjct: 307 LTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG---- 362

Query: 345 QICTSIVLVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
                ++ V+CG W      S GK+ T+G     GTF        G LGHG+     +P 
Sbjct: 363 ---LQVLSVACGSWHSALTTSSGKLYTFG----DGTF--------GVLGHGDRETLAYPK 407

Query: 404 IVNFGENVKALQVSCGFNHTGALLE 428
            V      K ++V+CG  H+ A++E
Sbjct: 408 EVEALSGFKTIKVACGIWHSAAIVE 432


>gi|116331201|ref|YP_800919.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
 gi|116124890|gb|ABJ76161.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
          Length = 506

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 133/299 (44%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +        + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S+ P+ + GL  +V+Q+  G  HS+A+T  GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLS-DVIQVIAGSEHSAALTESGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A   +   P KVE LSGI  KQ A G +  +A+   G++ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L         AG   S  I +NG V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H   L   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 159/367 (43%), Gaps = 42/367 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AIT +G +Y WG N+ GQLG+G         +AA     PT V  ++       A GF
Sbjct: 190 SMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G        L + S    P  +  L  V   I  A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLSDVIQVI--A 300

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           G  HSA + E+G VY++G      +    L         P  +  L   +++  G  H  
Sbjct: 301 GSEHSAALTESGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L S G +Y+WG N +G LGIG      SP     P   + V  I  +  + + G +  +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNP---TQVLNITNASSIWAGGTQSFS 414

Query: 362 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGF 420
            +  G++  WG          +G+++   +G  N +    P     G +NV  +   CG 
Sbjct: 415 ILKNGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGA 463

Query: 421 NHTGALL 427
            H  ALL
Sbjct: 464 THNFALL 470



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 36/275 (13%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           S IF+    + F Q  S+A+T  G+V +WG    G+LG G  ++     R+     P  +
Sbjct: 178 SNIFS----IHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233

Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
             + G+   +  A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +     +  +P +V+G      
Sbjct: 292 LSDVIQVIAGSEHSAALTESGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG------ 345

Query: 343 VDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGS 376
                + I  ++ G  H  A+ S+G+I +WG   S
Sbjct: 346 ----LSGIKQIANGRDHILALASDGRIYSWGLNAS 376



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 149/348 (42%), Gaps = 35/348 (10%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  ++G+LG G S       V+       ++ ++     +++ +T+ G VY  G N  GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAITKNGRVYTWGNNAKGQ 209

Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           LGI  N          G    P  + G+   V+  + G++H+  +  DG +  +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268

Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           QLG G     A      P  V  LS +   Q   G E S A+T  G+V  WG    G LG
Sbjct: 269 QLGNGANDLNADSFSMNPVAVVGLSDVI--QVIAGSEHSAALTESGEVYVWGRNQYGNLG 326

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G+ S+      +  + TP  ++ L G+K    A G  H   +  +GR+Y +G  A  ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASDGRIYSWGLNASGQL 379

Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC-LGIGSID 326
                   N    P+ +  +  +  +  GG  +  +   GE+  WG+N N   L IG  +
Sbjct: 380 GIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439

Query: 327 VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGW 373
            L   E  +             +++   CG  H  A +  G+I  WGW
Sbjct: 440 TLKVYEPNKAVVG-------IDNVIHFGCGATHNFALLGNGEIYGWGW 480



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L +    +  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P     L       I  G   S +I  +GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   + A+ G G++  WG    G LG 
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGNGEIYGWGWNFKGSLGR 488


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 2703 GGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 2762

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2763 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2820

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2821 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2871

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2872 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2931

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 2932 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGK--------KIVHVAVGALHCLAVTDAGQVY 2983

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2984 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 43/314 (13%)

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            VVQ++ G     A+TV+G++Y  G+ +NG+LGLG  +  V PIP +V  LS    K+ A+
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTV-PIPRQVTALSSYVVKKVAV 2756

Query: 185  --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
              G   + A+T  GKV SWG G  G+LGH        F R   +  PRLI+ L+  +++ 
Sbjct: 2757 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 2807

Query: 243  AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
             A G  HSA +  +G +Y +G     ++   +     +P ++  L      +V CG    
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2867

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSC 355
             T  LT  G +++WG  + G LG G  +  + P   ER+ G             +  + C
Sbjct: 2868 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNG-----------QGVCQIEC 2916

Query: 356  GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            G + + A+++ G + TWG G               +LGHG+DV    P +V      K +
Sbjct: 2917 GAQFSLALTKSGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIV 2964

Query: 415  QVSCGFNHTGALLE 428
             V+ G  H  A+ +
Sbjct: 2965 HVAVGALHCLAVTD 2978



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 121/247 (48%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q +AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQPLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TDNGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNEN 317
           +WG+N+ 
Sbjct: 733 SWGNNDQ 739



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2721 GEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2780

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2781 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2839

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2840 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2893

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2894 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2948

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2949 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3008

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 3009 GLEGQ--------KITRVACGSSHSVA 3027



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2775 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2834

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2835 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2892

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2893 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2949

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2950 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2998

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2999 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3030



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 58/331 (17%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+         +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G      + +NG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESP 342
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P   E +QG      
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQG------ 709

Query: 343 VDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  ++ V+ G  H  A++E  ++ +WG
Sbjct: 710 -----KKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 118/230 (51%), Gaps = 21/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G     A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G+
Sbjct: 696 EHV---------RYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGN 736



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 170/391 (43%), Gaps = 48/391 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3636 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3693

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LG+      S    LE ++   ++K  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3694 GRLGVGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3751

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  VE L G      A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3752 HGNRSP--CDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD--- 3806

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3807 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3860

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +  + P    K+P S  V   G  +    S   L   G  +   LG GS D +  P +V
Sbjct: 3861 SDGCKVP---MKVPLSLRV---GRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQV 3914

Query: 335  QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
            QG   +  +     S+  V C         EG++ TW            G +  GQLG G
Sbjct: 3915 QGLQGKKVIAIATGSLHCVCC-------TEEGEVYTW------------GDNDEGQLGDG 3955

Query: 395  NDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
                   P +V   +  K  +V+CG  HT A
Sbjct: 3956 TTNAIQRPRLVAALQGRKVNRVACGSAHTLA 3986



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 31/267 (11%)

Query: 165  IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            I +P+  E LS +   Q A G +   AVT  GKV + G   +GRLG G  S  +   R  
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743

Query: 225  SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
            +  +  ++K     KV + + G  H+  +  +G+V+ +G+    K+      +  +P LI
Sbjct: 2744 TALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2797

Query: 285  SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
              L      ++ CG  H+  LTS GELYTWG  E G LG G       P+ V+       
Sbjct: 2798 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-- 2855

Query: 343  VDQICTSIVLVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
                   ++ V+CG +     A   EG + +WG     G F        G+LG G     
Sbjct: 2856 ------RVIQVACGSRDAQTLALTDEGLVFSWG----DGDF--------GKLGRGGSEGC 2897

Query: 400  IHPTIVNFGENVKALQVSCGFNHTGAL 426
              P  +         Q+ CG   + AL
Sbjct: 2898 NVPQNIERLNGQGVCQIECGAQFSLAL 2924



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 23/248 (9%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +PT  E L+ +   Q   G +   AVT  GK+ + 
Sbjct: 3631 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3688

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S+           P L++ ++ V ++  A  +G  H   +   G V
Sbjct: 3689 GYGAGGRLGVGGTESV---------SAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+     +   RP ++  L  +E  ++  GG H+  +TS G+LYTWG    
Sbjct: 3740 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRY 3799

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG-GS 376
            G LG    +    P+ V+       VD  C S      G   T  +++   + W WG G 
Sbjct: 3800 GRLGHSDSEDQLKPKLVEALQGHRVVDVACGS------GDAQTLCLTDDDTV-WSWGDGD 3852

Query: 377  HGTFSEDG 384
            +G     G
Sbjct: 3853 YGKLGRGG 3860



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 44/251 (17%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG       
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSCGWK 358
            +T  G++++WG  + G LG G  D   +P   E++Q              +V V CG +
Sbjct: 620 AVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD-----------LDVVKVRCGSQ 668

Query: 359 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 417
            + A++ +G++ +WG G +             +LGHG +    +P ++   +  K + V+
Sbjct: 669 FSVALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEALQGKKVIDVA 716

Query: 418 CGFNHTGALLE 428
            G  H  AL E
Sbjct: 717 AGSTHCLALTE 727



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3629 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3679

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3680 TADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKI 368
            Y+WG  E+G LG G+      P  V+            T +V ++ G  H+A + S G +
Sbjct: 3740 YSWGEAEDGKLGHGNRSPCDRPRVVESLRG--------TEVVDIAAGGAHSACVTSAGDL 3791

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + V+CG
Sbjct: 3792 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 3830



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 27/143 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +  A +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            F  L  ++      EP  + GL  K +V I+ G   S         + W   S   +GL
Sbjct: 742 HFDTLHQTKP-----EPSLLPGLDTKHIVGIACGPAQS---------FAWSSCSEWSVGL 787

Query: 158 GKKAAKVIPIPTKVECLSGIFTK 180
                    +P  V+  SG F +
Sbjct: 788 R--------VPFVVDVCSGTFEQ 802


>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
           gallopavo]
          Length = 537

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 21/271 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     + +L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 60  LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G  A +  P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            +V  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP  +  L GV +   A G+ H+  + + G +Y +G     ++    GN + + S +  +
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPLQIM 286

Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
              E VV    C   HT    T  G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L+  G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P R+S     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   P +V  L G+   Q A G+  ++A+T  G + +WGA   G+LG G +S+ L 
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
            L        +++ E E V V+IAA    H SA   ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 40/320 (12%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +   T + E++++G N +  LG G   + ++P   K+E
Sbjct: 19  LSPQEIASIRKACV-FGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVP--KKLE 75

Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
            L G   K ++L +      +  T  G+V +WG  G  +LG+G          +    TP
Sbjct: 76  ALCG--KKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGA---------TNQGVTP 124

Query: 230 -RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
            ++   L   KV   A G  HS  +  +G +Y +G     ++      +   P  +S   
Sbjct: 125 VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCL 184

Query: 289 YSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
             + VV   CG   +  + + GE+Y WG N NG LG+G+     +P RV      + +  
Sbjct: 185 QDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRV------AALHG 238

Query: 346 ICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           +C  I+ ++CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +
Sbjct: 239 VC--ILQIACGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPLQI 285

Query: 406 NFGENVKALQVSCGFNHTGA 425
              +       +C   HT A
Sbjct: 286 MMEKERVVEIAACHSAHTSA 305



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  P   +A     +  +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L PL+I   K+ VV+I+  +  H S+A T  G++YMWG+   GQ      
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322

Query: 161 AAKVIPIPTKVECLSGIF 178
            + V+P  T   C   +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 39/287 (13%)

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           ++SN  + +GK     +  P ++  +  + +F   A     +++  T   +V  +G   S
Sbjct: 2   RHSNIMVDVGKWPIFTLLSPQEIASIRKACVFGTSA----NEAIYTTHNDEVFVFGLNCS 57

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDR 265
             LG G   S +          P+ ++ L G K+   + G   H     E+G VY +G  
Sbjct: 58  NCLGTGDSQSTI---------VPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHN 108

Query: 266 AVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
              ++     N    P  +     L    EV CG +H+  L+  G+LY WG N  G +G 
Sbjct: 109 GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGS 168

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFS 381
           GS     +P RV     +  V       V ++CG   + A ++ G++  WG+ G+     
Sbjct: 169 GSTANQPTPRRVSNCLQDKMV-------VGIACGQTSSMAVVNNGEVYGWGYNGN----- 216

Query: 382 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                  GQLG GN+ + + P  V     V  LQ++CG+ HT AL +
Sbjct: 217 -------GQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 256


>gi|194218802|ref|XP_001915749.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
           homolog [Equus caballus]
          Length = 437

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 33/326 (10%)

Query: 56  LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
           LE    P+     ++  +  ++CG AH+L LT++  V++ G N +GQ G  + EN  YS 
Sbjct: 132 LEPSPIPLPLDRPQETRVLQVSCGRAHSLILTDSEGVFSLGNNSYGQCGRKVVENEIYSE 191

Query: 114 --EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
             +  R+     +VVQ++ G  HS  +T  GE+Y  G  ++GQ GLG  +    P     
Sbjct: 192 SHKVHRMRDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYSITSTPTMLGG 251

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           + L+G+   Q A   +  +AV+  G +  WG        + +   +     ST    PR 
Sbjct: 252 D-LAGVNVVQVATYGDCCLAVSADGGLFGWG--------NSEYLQLASVTDSTQVNVPRC 302

Query: 232 IKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDK---MLFQEGNHARRPSLISKL 287
           +    GV KVK AA G    A ++E GRV+++G   + K   ++         PSL    
Sbjct: 303 LP-FSGVGKVKQAACGGTGCAVLNEEGRVFVWGYGILGKGPNLVETALPEMIPPSLFGLT 361

Query: 288 PYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ EV      CG  H   LT+ GEL+ WG N  GCLGIG ++  + P RV  P    P
Sbjct: 362 EFNPEVQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP--GEP 419

Query: 343 VDQICTSIVLVSCGWKHTAAISEGKI 368
           VD        V+CG  H   +++  I
Sbjct: 420 VD--------VACGVDHMVTLAKSFI 437


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 22/254 (8%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           K  ++A+ CG    + L+E G VY   +               L  +  +  +  V Q++
Sbjct: 74  KEKIEAVGCGDDEVILLSEKGSVYRVDVTQ----------ALYLPRMLEAFCRIPVSQVA 123

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  H+ A+T +G++Y WG+NS GQLGLGKK    I  P  V  LSG+   Q + G + S
Sbjct: 124 CGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCS-ISSPQCVRSLSGMPLVQVSAGGDHS 182

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A++  G V  WG    G+LG G          S    TP  +  L   K    + G  H
Sbjct: 183 FALSVSGSVFGWGRNDCGQLGLGD---------SQDRCTPTSVDSLNLKKTTSISCGKDH 233

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGG 307
           +A + ++G V+ FG     ++      +  RP L+++L       + CG YHT VL    
Sbjct: 234 TAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENN 293

Query: 308 ELYTWGSNENGCLG 321
           ++Y++G N+   LG
Sbjct: 294 KIYSFGCNDQNQLG 307



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LGLG  + R  P    +       +++CG  HT  LT+ G V+  G   FGQ
Sbjct: 194 WGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQ 253

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG + +    L P  ++ L   +V +I+ G +H+  +  + ++Y +G N   QLG    +
Sbjct: 254 LGHNSSRN-ELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDS 312

Query: 162 AKVIPIPT 169
              +P+P 
Sbjct: 313 HPSVPLPV 320



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 24/236 (10%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           K+ + G G    +   ++ S+     + + Y PR+++    + V   A G  H+  + + 
Sbjct: 76  KIEAVGCGDDEVILLSEKGSVYRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKE 135

Query: 257 GRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTW 312
           G+VY +G  +  ++ L ++G     P  +  L   P  + V  GG H+  L+  G ++ W
Sbjct: 136 GQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQ-VSAGGDHSFALSVSGSVFGW 194

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G N+ G LG+G      S +R      +S   +  TSI   SCG  HTA +++       
Sbjct: 195 GRNDCGQLGLGD-----SQDRCTPTSVDSLNLKKTTSI---SCGKDHTAILTK------- 239

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
               HGT    G    GQLGH +  + + P +V      K  +++CG  HT  L E
Sbjct: 240 ----HGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQE 291



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 23/146 (15%)

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVD 344
           ++P S+ V CG  HT  LT  G++YTWG N  G LG+G     + SP+ V+   S  P  
Sbjct: 116 RIPVSQ-VACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRS-LSGMP-- 171

Query: 345 QICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
                +V VS G  H+ A+S  G +  W            G +  GQLG G+  D   PT
Sbjct: 172 -----LVQVSAGGDHSFALSVSGSVFGW------------GRNDCGQLGLGDSQDRCTPT 214

Query: 404 IVNFGENVKALQVSCGFNHTGALLEY 429
            V+     K   +SCG +HT  L ++
Sbjct: 215 SVDSLNLKKTTSISCGKDHTAILTKH 240



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 51/210 (24%)

Query: 57  ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
           ++ + P +  AF +  +  +ACG  HT+ LT+ G VY  G N  GQLG+ +       P 
Sbjct: 103 QALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ 162

Query: 117 RISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP------- 168
            +  L    +VQ+S G  HS A++V G ++ WG+N  GQLGLG    +  P         
Sbjct: 163 CVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222

Query: 169 --TKVEC---LSGIFTK--------------------------------------QAALG 185
             T + C    + I TK                                      + A G
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACG 282

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
              ++ +    K+ S+G     +LG   +S
Sbjct: 283 RYHTLVLQENNKIYSFGCNDQNQLGRSNDS 312


>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6 [Sarcophilus harrisii]
          Length = 1032

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 164/357 (45%), Gaps = 48/357 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-----KALACGGAHTLFLTETGCVYATGL 97
           WG+  + +LG+ +   R  P V    E  SL        ACG  H+L L   G V++ G 
Sbjct: 5   WGDNSFRQLGINA-GRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGN 63

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N +GQLG  +NI  S  P  I  L+ + VV +S G  HS AI   G +Y WG  S GQLG
Sbjct: 64  NSYGQLG-RKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLG 122

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           + K+      IP  +  LS     Q + G   S+A+T  GKV SWG    G+LG G    
Sbjct: 123 I-KEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGT--- 178

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                   S+ +P+ +  L+G+ +   AAG  HS  +  +G  Y +G R  +  L   G 
Sbjct: 179 -----NFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWG-RNKEGQLALSGK 232

Query: 277 HARRPSLISKLPY-SEEVVCGGYHTCVLTSG-------------GELYTWGSNENGCLGI 322
           +A   S+   + + +E + C   ++     G             G++ T+GSN +G LG 
Sbjct: 233 NASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQLGH 292

Query: 323 GSIDVLHSPERVQGP--FSESPVDQICTSIVLVSCGWKHTAAI--SEGKILTWGWGG 375
           G I     P+ V+    FS+            ++CG  HT A   + G++L++G G 
Sbjct: 293 GLITKPRGPQIVESAELFSQ------------IACGSHHTLAYACTSGQVLSFGCGS 337



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 151/352 (42%), Gaps = 51/352 (14%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYM 146
           Y  G N F QLGI  N G    P  +   +      +++VQ + G  HS  +  DG ++ 
Sbjct: 3   YCWGDNSFRQLGI--NAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWS 60

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G NS GQ  LG+K  K    P  ++ L        + G E S+A+   G++ SWG+G  
Sbjct: 61  CGNNSYGQ--LGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSR 118

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG  +               P+ I  L   K+   + G  HS  + ++G+V+ +GD  
Sbjct: 119 GQLGIKEVKDQCSI--------PKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDND 170

Query: 267 VDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             ++     F      +R + +  +P + +V  GG H+  L+  G  Y WG N+ G L +
Sbjct: 171 HGQLGLGTNFPSQASPQRVNSLDGIPLA-QVAAGGSHSFALSLSGTSYGWGRNKEGQLAL 229

Query: 323 G-------SID--VLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
                   SI+  + H  E +    S S  +      +L       +  I++GK+LT+G 
Sbjct: 230 SGKNASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELL-----NRSRQIADGKVLTFGS 284

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             S            GQLGHG       P IV   E     Q++CG +HT A
Sbjct: 285 NNS------------GQLGHGLITKPRGPQIVESAELFS--QIACGSHHTLA 322



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 24/140 (17%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIV 351
           +  CG  H+ +L + G +++ G+N  G LG  +I     P         +P+  + T +V
Sbjct: 41  QAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRP---------APIQALETQVV 91

Query: 352 L-VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG 408
           + VSCG +H+ AI + G+I +WG G            S GQLG     D    P  +   
Sbjct: 92  VSVSCGKEHSLAICKTGRIYSWGSG------------SRGQLGIKEVKDQCSIPKNIAAL 139

Query: 409 ENVKALQVSCGFNHTGALLE 428
              K +QVSCG  H+ AL +
Sbjct: 140 SRDKIIQVSCGHYHSIALTQ 159


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 27/312 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG  S  +R+ PV  S     +  A++ G  H+L L   G V+A G N +GQ
Sbjct: 778  WGYNGYGQLGDDSTTTRYSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNGYGQ 835

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG          P+++  L   VV I+ G   S A+  DG ++ WG+N+ G+LG G    
Sbjct: 836  LG-DGTTSSQRTPVQVKDLTG-VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTR 893

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              +P+  +V  L+ +  K  A G    VA+   G V +WG  G+G LG+   S+I     
Sbjct: 894  SSVPV--QVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGN--SSTI----- 942

Query: 223  STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
              S+ TP       GV  +K  AAG  H+  +  +G V+ +G     ++    GN+  R 
Sbjct: 943  --SQSTPVQ----SGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQL--GNGNNTSRS 994

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P+ I  L     +  G   +    + G LY+WG N NG LG G+    + P +V GP +
Sbjct: 995  VPAAIPGLASIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKVIGP-N 1053

Query: 340  ESPVDQICTSIV 351
             +P D    + V
Sbjct: 1054 INPADTTAPAAV 1065



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 152/335 (45%), Gaps = 47/335 (14%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKKEVVQISTGY 132
           A++  G HT+F+   G V+  G N  GQLG   +   S+  + + ++G+K     I+ G 
Sbjct: 708 AVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMK----MIAGGE 763

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +H+ A+  DG L+ WG N  GQLG      +  P+  +V  L+      A  G   S+A+
Sbjct: 764 NHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSA--GENHSLAL 819

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V ++G  G G+LG G  SS         + TP  +K+L GV V IAA G   S  
Sbjct: 820 KSDGTVWAFGYNGYGQLGDGTTSS---------QRTPVQVKDLTGV-VAIAA-GKDFSLA 868

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G V+ +G     ++       +  P  ++ L   + +  G YH   L   G ++ W
Sbjct: 869 LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 928

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQICTSIVLVSCGWKHTAAI-SEGKILT 370
           G N NG LG  S              S+S PV    T I  ++ G  HT A+ S+G + +
Sbjct: 929 GYNGNGELGNSST------------ISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 976

Query: 371 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 405
           WG+ G             GQLG+GN+     P  +
Sbjct: 977 WGYNGY------------GQLGNGNNTSRSVPAAI 999



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 165/376 (43%), Gaps = 42/376 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+  S   P          +K +A G  HT+ L   G ++  G N +GQ
Sbjct: 728  WGYNGHGQLGTGTSNSTSVP--GKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQ 785

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG  ++      P+++S L      +S G +HS A+  DG ++ +G N  GQLG G  ++
Sbjct: 786  LG-DDSTTTRYSPVQVSTLTNWTA-VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSS 843

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V+ L+G+    A   F  S+A+   G V SWG    G LG+G  +      R
Sbjct: 844  QRTPV--QVKDLTGVVAIAAGKDF--SLALKSDGTVWSWGQNTYGELGNGTTT------R 893

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            S+      L+ +     VK  AAG  H   + ++G V+ +G    +  L      ++   
Sbjct: 894  SSVPVQVALLTD-----VKAIAAGDYHGVALKKDGSVFAWGYNG-NGELGNSSTISQSTP 947

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            + S +   + +  G YHT  L S G +++WG N  G LG G+      P  + G      
Sbjct: 948  VQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAIPG------ 1001

Query: 343  VDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                  SI  ++ G   + A     IL + W          G ++ GQLG+G  VD   P
Sbjct: 1002 ----LASIASIAAGENQSIAYGNDGIL-YSW----------GRNANGQLGNGTTVDTNVP 1046

Query: 403  TIVNFGENVKALQVSC 418
              V  G N+     + 
Sbjct: 1047 HKV-IGPNINPADTTA 1061



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 101/258 (39%), Gaps = 34/258 (13%)

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G ++A   P+        G      +L    ++ +   G V  WG  G G+LG G     
Sbjct: 685 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTG----- 739

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S S   P  +  L G  +K+ A G  H+  +  +G ++ +G     ++       
Sbjct: 740 ----TSNSTSVPGKVINLTG--MKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT 793

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +S L     V  G  H+  L S G ++ +G N  G LG G+     +P +V+  
Sbjct: 794 RYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKD- 852

Query: 338 FSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 396
                     T +V ++ G   + A+ S+G +  W W          G ++ G+LG+G  
Sbjct: 853 ---------LTGVVAIAAGKDFSLALKSDGTV--WSW----------GQNTYGELGNGTT 891

Query: 397 VDYIHPTIVNFGENVKAL 414
                P  V    +VKA+
Sbjct: 892 TRSSVPVQVALLTDVKAI 909


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 29/260 (11%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVV 126
           +K  + ++  G  H L L+  G  +                 YS+E  R   +  +K ++
Sbjct: 5   KKMKIHSVDQGAEHMLILSSDGKPF--------------EYNYSIEHARFQCILQEKSII 50

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           QI+ G +HS A++  GEL+ WG+N +GQLG+G+  A  IP P  VE LSG+   Q + G 
Sbjct: 51  QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFAS-IPTPQLVEHLSGVPLVQISAGK 109

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A++  G + SWG    G+LG G          +  E  P L++ L+  KV+  A G
Sbjct: 110 AHSMALSMSGNIYSWGRNDLGQLGLGH---------TDGEEFPSLVEALDSQKVEFLACG 160

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
             H+A + E+G+V+ FG     ++      +  RP L+++L      +V CG  HT    
Sbjct: 161 GSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYV 220

Query: 305 SG-GELYTWGSNENGCLGIG 323
           S  G+++++GS + G LG G
Sbjct: 221 SDLGKVFSFGSGKEGQLGNG 240



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 14/228 (6%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVV 126
            ++ S+  + CG  H+L L++ G ++A G N  GQLGI         P  +  L    +V
Sbjct: 44  LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLV 103

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           QIS G  HS A+++ G +Y WG+N  GQLGLG    +    P+ VE L     +  A G 
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGE--EFPSLVEALDSQKVEFLACGG 161

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  +T  G+V ++GAG  G+LGH           + +E  PRL+ EL G++V   A G
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNS---------TQNELRPRLVTELTGIRVTQVACG 212

Query: 247 FLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
             H+ A + + G+V+ FG    +  L   G H +   L  KLP +E++
Sbjct: 213 RRHTLAYVSDLGKVFSFGS-GKEGQLGNGGTHNQLIPLPMKLPSNEDL 259



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 6/173 (3%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LG+G L  S   P +        L  ++ G AH++ L+ +G +Y+ G ND G
Sbjct: 71  WGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLG 130

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+    G    P  +  L  + V+ ++ G  H++ +T DG+++ +G   +GQLG    
Sbjct: 131 QLGLGHTDGEEF-PSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNST 189

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
             ++   P  V  L+GI   Q A G   ++A V+  GKV S+G+G  G+LG+G
Sbjct: 190 QNEL--RPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 240



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LGLG  +    P +  A +   ++ LACGG+HT  LTE G V+  G    GQ
Sbjct: 124 WGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQ 183

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
           LG   +    L P  ++ L    V Q++ G  H+ A   D G+++ +G    GQLG G  
Sbjct: 184 LG-HNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGT 242

Query: 161 AAKVIPIPTKV 171
             ++IP+P K+
Sbjct: 243 HNQLIPLPMKL 253



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 32/234 (13%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q   G   S+A++ GG++ +WG    G+LG G+  + +         TP+L++ L GV +
Sbjct: 51  QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIP--------TPQLVEHLSGVPL 102

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
              +AG  HS  +  +G +Y +G   + ++     +    PSL+  L     E + CGG 
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGS 162

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWK 358
           HT +LT  G+++T+G+ ++G LG  S      P  V         +     +  V+CG +
Sbjct: 163 HTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLV--------TELTGIRVTQVACGRR 214

Query: 359 HTAA-ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 410
           HT A +S+ GK+ ++G G              GQLG+G   + + P  +    N
Sbjct: 215 HTLAYVSDLGKVFSFGSGKE------------GQLGNGGTHNQLIPLPMKLPSN 256



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 58/180 (32%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC---- 347
           ++ CG YH+  L+ GGEL+ WG N +G LGIG +            F+  P  Q+     
Sbjct: 51  QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRL------------FASIPTPQLVEHLS 98

Query: 348 -TSIVLVSCGWKHTAAIS-EGKILTWGW-------------------------------- 373
              +V +S G  H+ A+S  G I +WG                                 
Sbjct: 99  GVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLA 158

Query: 374 -GGSH-GTFSEDGHS------SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            GGSH    +EDG          GQLGH +  + + P +V     ++  QV+CG  HT A
Sbjct: 159 CGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLA 218


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 38/376 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG   YG+LGLG   +   P     +     + +++++  G +H+  + E G VY  G  
Sbjct: 4   WGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRG 63

Query: 99  DFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             GQLG        LEP  +  ++      ++ G +H+  +T +G +Y WG+N  GQLG 
Sbjct: 64  WEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGT 123

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G   +   P+      L+       A G   +VA+   G + SWG    G+LGHG   + 
Sbjct: 124 GDLKSSNSPVLID-SALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTC 182

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P  +  +       AA G  H+  + +  ++Y +G  A  ++     + 
Sbjct: 183 ---------YFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDK 233

Query: 278 A-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           A  +P ++  L  S    V+CG  H+  L    ++YTWG N+ G LG+G           
Sbjct: 234 AVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGH---------- 283

Query: 335 QGPFSESPVDQICTS-----IVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 389
              ++ SPV ++ T+     +  ++CG+ H  A    ++   G       +S  G    G
Sbjct: 284 ---YTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEP-GMPPLEHVYSW-GRGEEG 338

Query: 390 QLGHGNDVDYIHPTIV 405
           QLGH   +    P IV
Sbjct: 339 QLGHNELLSRCTPRIV 354



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 39/294 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVL 199
           +Y WGKN  GQLGLG      +P+PT +  LS    ++       G   S  +   G V 
Sbjct: 1   VYSWGKNKYGQLGLGH--TNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVY 58

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           +WG G  G+LGH   + I        E  P ++ ++E       A G  H+  + +NG +
Sbjct: 59  TWGRGWEGQLGHDVVTEI--------ELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLI 110

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           Y +G+    ++   +   +  P LI     LP    + CG +HT  +   G +++WG N+
Sbjct: 111 YTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEG-KILTWGWGG 375
            G LG G+    + P +V G        +IC   +  +CG +HT  +++  KI  WG   
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGM-----AKKIC---IRAACGGQHTLVLTDANKIYAWG--- 219

Query: 376 SHGTFSEDGHSSGGQLG-HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                     ++ GQLG + +D   + P IV+      A  V CG++H+ AL++
Sbjct: 220 ---------SNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMK 264



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 27/308 (8%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG   + E    P +    E     A+ACG  HT+ +T+ G +Y  G N  G
Sbjct: 60  WGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119

Query: 102 QLGISENIGYSLEPLRI-SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG  + +  S  P+ I S L    V+ I+ G  H+ AI ++G ++ WG+N  GQLG G 
Sbjct: 120 QLGTGD-LKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGN 178

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              K    PT+V  ++     +AA G + ++ +T   K+ +WG+   G+LG  +    + 
Sbjct: 179 --TKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAV- 235

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P ++  L          G+ HS  + +N ++Y +G     ++      H+ 
Sbjct: 236 -------LQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSP 288

Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGE----------LYTWGSNENGCLGIGSIDV 327
            P L++ L     +++ C GY  CV     E          +Y+WG  E G LG   +  
Sbjct: 289 VPELVTALRSVRVQQIAC-GYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLS 347

Query: 328 LHSPERVQ 335
             +P  V+
Sbjct: 348 RCTPRIVE 355



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 150/345 (43%), Gaps = 39/345 (11%)

Query: 92  VYATGLNDFGQLGI--SENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMW 147
           VY+ G N +GQLG+  + N+      L +S    +K V  I  G  HS+ I  DG++Y W
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+   GQLG      ++   P  V  +    +   A G   +V VT  G + +WG   +G
Sbjct: 61  GRGWEGQLG-HDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           +LG G        L+S++  +P LI   L    V   A G  H+  I   G ++ +G   
Sbjct: 120 QLGTGD-------LKSSN--SPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170

Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++          P+ +  +         CGG HT VLT   ++Y WGSN  G LG+  
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNR 230

Query: 325 IDVLHSPERVQGPFSESPVDQICTS-IVLVSCGWKHTAAISEG-KILTWGWGGSHGTFSE 382
            D        +       VD +  S    V CG+ H+ A+ +  +I TW           
Sbjct: 231 SD--------KAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTW----------- 271

Query: 383 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 427
            G +  GQLG G+      P +V    +V+  Q++CG++H  A +
Sbjct: 272 -GRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFV 315


>gi|408500677|ref|YP_006864596.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465501|gb|AFU71030.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1082

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 177/410 (43%), Gaps = 66/410 (16%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPV-------VCSAFEKHSLKALACGGAHTLFLTETGCV 92
           A  WG+   G+LG G    +  PV       V + F   +   ++ G  H+L L   G V
Sbjct: 586 AYAWGDNRSGQLGNGMTTQQNTPVQVKKPAGVSADF---TYVQVSAGYRHSLALGSDGYV 642

Query: 93  YATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITVDG 142
           YA G N + QLG + + GYS  P+R+          +GLK   +Q+  G  HS AI  +G
Sbjct: 643 YAWGDNTYAQLGNNTSGGYSTVPVRVCDPSTHSNVNTGLK--AIQVDAGGEHSLAIDKEG 700

Query: 143 ELYMWGKNSNGQLGLGKKAA------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
            ++ WG+N NGQLG G  ++      +V       +   G+   + A G   S+A+   G
Sbjct: 701 NVWAWGRNRNGQLGNGTSSSYSSAPVRVCDPEHPTDASKGLVALKVAGGGAHSLAIDRDG 760

Query: 197 KVLSWGAGGSGRLGHGQESSILGF----LRSTSEYTPRLI-KELEGVKVKIAAAGFLHSA 251
              +WG    G+LG+   S   G     +R      P    K L+ V++   +AGF HS 
Sbjct: 761 DTWAWGFNSYGQLGNNVTSGFDGANPVPVRVRDPNNPDDTSKNLKSVQI---SAGFEHSI 817

Query: 252 CIDENGRVYIF--------GDRAVDKMLFQEGN--HARRPSLISKLPYSEEVVCGGYHTC 301
            ID  G  + +        G    ++ +       +   PS    +P+    V  GY T 
Sbjct: 818 AIDAQGNTWSWGWNYWGELGQNTTNEDILSPARVYNPDNPS----IPFKASQVSAGYDTS 873

Query: 302 VLTS-GGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQICTSIVLVSCGW 357
           +     G  ++WG N  G LG  + D     + P +V+ P S +  D +     LVS G 
Sbjct: 874 LAVDINGIAWSWGRNTYGQLGYTNYDDSRGHNQPAKVRNPASPNNTD-LSLDSTLVSAGN 932

Query: 358 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 407
            H+ AI +    T+GW          G++  GQLG+ ++ +   P +V F
Sbjct: 933 WHSLAIGKDG-YTYGW----------GYNKYGQLGNNSNKNAYVPMLVEF 971



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 55/346 (15%)

Query: 115 PLRISGLKKEVVQISTG---YHHSSAITV--DGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
           P   SG+K   +  S G     +S ++ V  DG  Y WG N +GQLG G    +  P+  
Sbjct: 552 PDSTSGVKFNQISNSIGSVVMQNSVSLAVGSDGNAYAWGDNRSGQLGNGMTTQQNTPVQV 611

Query: 170 KVEC-LSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH---GQESSILGFLRST 224
           K    +S  FT  Q + G+  S+A+   G V +WG     +LG+   G  S++   +   
Sbjct: 612 KKPAGVSADFTYVQVSAGYRHSLALGSDGYVYAWGDNTYAQLGNNTSGGYSTVPVRVCDP 671

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-------- 276
           S ++  +   L+ ++V    AG  HS  ID+ G V+ +G R  +  L   GN        
Sbjct: 672 STHS-NVNTGLKAIQVD---AGGEHSLAIDKEGNVWAWG-RNRNGQL---GNGTSSSYSS 723

Query: 277 ------HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG---IGSIDV 327
                     P+  SK   + +V  GG H+  +   G+ + WG N  G LG       D 
Sbjct: 724 APVRVCDPEHPTDASKGLVALKVAGGGAHSLAIDRDGDTWAWGFNSYGQLGNNVTSGFDG 783

Query: 328 LHS-PERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 385
            +  P RV+ P +     +   S V +S G++H+ AI ++G   +WGW            
Sbjct: 784 ANPVPVRVRDPNNPDDTSKNLKS-VQISAGFEHSIAIDAQGNTWSWGW------------ 830

Query: 386 SSGGQLGHG-NDVDYIHPTIVNFGEN----VKALQVSCGFNHTGAL 426
           +  G+LG    + D + P  V   +N     KA QVS G++ + A+
Sbjct: 831 NYWGELGQNTTNEDILSPARVYNPDNPSIPFKASQVSAGYDTSLAV 876


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 171/375 (45%), Gaps = 53/375 (14%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-ST 130
            ++ +ACGG H   +T+ G V+  G    G+LG   +   S  P  +  L     ++ + 
Sbjct: 310 DVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVS-HPQLVEALASSTTEVVAC 368

Query: 131 GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           G +H  A+T+ G+LY WG   +S G LG G   +  IP       L  +     A G   
Sbjct: 369 GEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGP-LEEVRVASIACGPWH 427

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  VT  G++ ++G G  G LGH    S          Y+PR ++ L+G++   AA G  
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSA---------YSPREVESLKGLRTVRAACGVW 478

Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EE 292
           H+A + E            +G+++ +GD   DK     G+  +R  P+ ++ L      +
Sbjct: 479 HTAAVVEVMVGSSSASSCSSGKLFTWGDG--DKGRLGHGDKEQRLVPTCVAALVDHNFRK 536

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           V CG   T  LT+ GE++T GS+  G LG    D    P  V+G   ++ V+ I      
Sbjct: 537 VACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADG-KLPGMVEGRLVDAYVEDI------ 589

Query: 353 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            +CG  H A ++ + ++ TWG G +            G+LGHG+  D   PT+V   +  
Sbjct: 590 -ACGAHHVACVTLKSEVYTWGKGAN------------GRLGHGDQEDRNTPTLVEALKEK 636

Query: 412 KALQVSCGFNHTGAL 426
           +   ++CG   T A+
Sbjct: 637 QVKSIACGATFTAAV 651



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 147/347 (42%), Gaps = 54/347 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    + + +ACG  H   +T +G +Y    G +  
Sbjct: 333 WGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSL 392

Query: 101 GQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P R++G  +EV    I+ G  H++ +T  G+L+ +G  + G LG  
Sbjct: 393 GLLGHGNDISHWI-PKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHN 451

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +   P   +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 452 DRQSAYSP--REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDK 509

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG +   L          P  +  L     +  A G   +  +   G V+  G   
Sbjct: 510 GRLGHGDKEQRL---------VPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGS-- 558

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              M  Q G+    P    KLP          Y E++ CG +H   +T   E+YTWG   
Sbjct: 559 --SMFGQLGD----PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGA 612

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
           NG LG G  +  ++P  V+    E  V  I       +CG   TAA+
Sbjct: 613 NGRLGHGDQEDRNTPTLVEA-LKEKQVKSI-------ACGATFTAAV 651



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 135/315 (42%), Gaps = 44/315 (13%)

Query: 131 GYHHSSAITVDGELYMWGKNSNG--------QLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           G HH+ A+   G++YMWG+            ++G G       P+P  +E    +  +  
Sbjct: 258 GSHHAEAL---GDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYV 314

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G + +  VT  G+V +WG    GRLGHG +  +           P+L++ L     ++
Sbjct: 315 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDV---------SHPQLVEALASSTTEV 365

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE----EVVCG 296
            A G  H   +  +G +Y +GD      L   GN      P  ++  P  E     + CG
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACG 424

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-----TSIV 351
            +HT V+T+ G+L+T+G    G LG       +SP  V+       V   C      ++V
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVV 484

Query: 352 LVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 411
            V  G    ++ S GK+ TWG G              G+LGHG+    + PT V    + 
Sbjct: 485 EVMVGSSSASSCSSGKLFTWGDGDK------------GRLGHGDKEQRLVPTCVAALVDH 532

Query: 412 KALQVSCGFNHTGAL 426
              +V+CG + T AL
Sbjct: 533 NFRKVACGHSLTVAL 547



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 26/208 (12%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++          P L+  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNEN--GCLGIGSIDVLH-SPERVQGPFSESPV 343
            S  E V CG YH C +T  G+LYTWG   +  G LG G+ D+ H  P+RV GP  E   
Sbjct: 360 SSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGN-DISHWIPKRVNGPLEE--- 415

Query: 344 DQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 402
                 +  ++CG  HTA ++  G++ T+G     GTF        G LGH +      P
Sbjct: 416 ----VRVASIACGPWHTAVVTTAGQLFTFG----DGTF--------GVLGHNDRQSAYSP 459

Query: 403 TIVNFGENVKALQVSCGFNHTGALLEYV 430
             V   + ++ ++ +CG  HT A++E +
Sbjct: 460 REVESLKGLRTVRAACGVWHTAAVVEVM 487


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 172/392 (43%), Gaps = 42/392 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 2265 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 2323

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 2324 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2381

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH      
Sbjct: 2382 GSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 2435

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 2436 -----SEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 2490

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L       V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 2491 DGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQ 2550

Query: 334  VQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
            VQG   +  +     S+  V C         +G++ TW            G +  GQLG 
Sbjct: 2551 VQGLQGKKAIAIATGSLHCVCC-------TEDGEVYTW------------GDNDEGQLGD 2591

Query: 394  GNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
            G       P +V   +  K  +V+CG  HT A
Sbjct: 2592 GTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 2623



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 1304 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRH 1363

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 1364 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 1421

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 1422 SGELYTWGLGEYGRLGHGD---------TTTQLKPKMVKVLLGHRVVQVACGSRDAQTLA 1472

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 1473 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1532

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKIL 369
            TWG  +   LG GS   +  P+ V+G   +         IV V+ G  H  A+++ G++ 
Sbjct: 1533 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGK--------KIVHVAVGALHCLAVTDSGQVY 1584

Query: 370  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG         ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 1585 AWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 43/314 (13%)

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            VVQ++ G     A+TV+G++Y  G+ +NG+LGLG  +  V P+P +V  LS    K+ A+
Sbjct: 1299 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTV-PLPRQVTALSSYVVKKVAV 1357

Query: 185  --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
              G   + A+T  GKV SWG G  G+LGH        F R   +  PRLI+ L+  +++ 
Sbjct: 1358 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 1408

Query: 243  AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY-- 298
             A G  HSA +  +G +Y +G     ++   +     +P ++  L      +V CG    
Sbjct: 1409 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDA 1468

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQICTSIVLVSC 355
             T  LT  G +++WG  + G LG G  +  + P   ER+ G             +  + C
Sbjct: 1469 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG-----------QGVCQIEC 1517

Query: 356  GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 414
            G + + A+++ G + TWG G               +LGHG+DV    P +V      K +
Sbjct: 1518 GAQFSLALTKSGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIV 1565

Query: 415  QVSCGFNHTGALLE 428
             V+ G  H  A+ +
Sbjct: 1566 HVAVGALHCLAVTD 1579



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 1322 GEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 1381

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 1382 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 1440

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 1441 TTTQLKPKMVKV--LLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 1494

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 1495 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 1549

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 1550 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 1609

Query: 336  GPFSESPVDQICTSIVLVSCGWKHTAA 362
            G   +         I  V+CG  H+ A
Sbjct: 1610 GLEGQ--------KITRVACGSSHSVA 1628



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 1376 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1435

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +     L+P  +  L    VVQ++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 1436 LGHGDTT-TQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 1493

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 1494 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 1550

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 1551 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 1599

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 1600 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 1631



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 134/340 (39%), Gaps = 90/340 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 2260 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 2318

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 2319 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2378

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 2379 LGHGSRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 2429

Query: 269  KMLFQEGNHARRPSLISKLPYSEEV--VCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L     V   CG     T  LT    +++WG  + G LG G 
Sbjct: 2430 RLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2489

Query: 325  IDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 382
             D    P +         +D +    +V V CG + + A+++ G + TWG G  H     
Sbjct: 2490 SDGCKVPMK---------IDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYH----- 2535

Query: 383  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
                   +LGHG+D     P  V   +  KA+ ++ G  H
Sbjct: 2536 -------RLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLH 2568



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 122/285 (42%), Gaps = 43/285 (15%)

Query: 153  GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            G++   ++    I +P+  E LS +   Q A G +   AVT  GKV + G   +GRLG G
Sbjct: 1273 GRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 1332

Query: 213  QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              S  +   R  +  +  ++K     KV + + G  H+  +  +G+V+ +G+    K+  
Sbjct: 1333 LSSGTVPLPRQVTALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGH 1386

Query: 273  QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                +  +P LI  L      ++ CG  H+  LTS GELYTWG  E G LG G       
Sbjct: 1387 FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLK 1446

Query: 331  PERVQGPFSESPVDQICTSIVLVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSS 387
            P+ V+              +V V+CG +     A   EG + +WG     G F       
Sbjct: 1447 PKMVKVLLGH--------RVVQVACGSRDAQTLALTDEGLVFSWG----DGDF------- 1487

Query: 388  GGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 426
             G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 1488 -GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 1525



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 34/231 (14%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +           P   + L  ++      G      +
Sbjct: 2258 GSGTIYGWGHNHRGQLGGIEGAKV---------KVPTPCEALAALRPVQLIGGEQTLFAV 2308

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 2309 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2368

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
            Y+WG  E+G LG GS      P  ++       VD        V+ G  H+A ++  G +
Sbjct: 2369 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVD--------VAAGGAHSACVTAAGDL 2420

Query: 369  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
             TWG G              G+LGH +  D + P +V   +  + + ++CG
Sbjct: 2421 YTWGKG------------RYGRLGHSDSEDQLKPKLVEALQGHRVVGIACG 2459


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 137/281 (48%), Gaps = 23/281 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
           + G    G LG G  +S   P          + +L+ G G H + +T  G VY+ G N +
Sbjct: 44  VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            QLG + +   +L P ++S   + K+   ++ G HHS  +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162

Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             A +  PIP KV  CL        A G   S+AV   G+V +WG  G+G+LG G     
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S ++ TP  I  L+G++V+    G+ H+  + + G +Y +G  +  ++    GN 
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269

Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
           + +   +  +   E +V    C   HT    S  G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 136/311 (43%), Gaps = 46/311 (14%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
            G   L++T+   V+  G N  G LG  +     +EP RI  L  K +V +S G   H  
Sbjct: 29  AGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
            +T DGE+Y WG N+  QLG G     + P        + +  K+A   A G   S+ +T
Sbjct: 88  IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAHSVACGSHHSMVLT 143

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
             G+V +WG   SG++G G          + ++  PR +   L+   V   A G + S  
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
           + +NG VY +G     ++      +   P  I+ L     E+VVCG  HT  LT  G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254

Query: 311 TWGSNENGCLGIGS-------IDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            WG+N  G LG G+       + V+   ER+               + + +C   HT+A 
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVDKERI---------------VEIAACHSSHTSAA 299

Query: 364 --SEGKILTWG 372
               G++  WG
Sbjct: 300 KSQSGQVYMWG 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 47/265 (17%)

Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           Q  L F Q   V G G          +V   G   SG LG G   SI+          PR
Sbjct: 15  QEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSII---------EPR 65

Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
            I  L G + V ++     H   +  +G VY +G  A  ++     N A  P     +LI
Sbjct: 66  RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           +K  +S  V CG +H+ VLT  GE+Y WG N +G +G GS      P +V          
Sbjct: 126 NKKAHS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNK--- 180

Query: 345 QICTSIVLVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 403
               +++ ++CG   + A +  G++  WG+ G+            GQLG G+  +   P 
Sbjct: 181 ----TVIGIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQPTPC 224

Query: 404 IVNFGENVKALQVSCGFNHTGALLE 428
            +   + ++  QV CG+ HT AL +
Sbjct: 225 RIAALQGIRVEQVVCGYAHTLALTD 249



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 33/292 (11%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
           IT + E+++ G NS+G LG G   A+ I  P +++ LSG      + G     V VT  G
Sbjct: 36  ITKNDEVFVMGTNSSGCLGTGD--AQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V SWG     +LG+G  +  L    S  + +  LI +    K    A G  HS  +  +
Sbjct: 94  EVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAHSVACGSHHSMVLTCD 145

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
           G VY +G     ++      +   P  ++    ++ V+   CG   +  +   GE+Y WG
Sbjct: 146 GEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWG 205

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGW 373
            N NG LG+GS     +P R+        V+Q       V CG+ HT A+++  ++ + W
Sbjct: 206 YNGNGQLGLGSSGNQPTPCRI-AALQGIRVEQ-------VVCGYAHTLALTDEGVM-YAW 256

Query: 374 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
           G           +S GQLG GN  +  +P  V   +       +C  +HT A
Sbjct: 257 GA----------NSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLGS  ++  P   +A +   ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+++   K+ +V+I+  +  H S+A +  G++YMWG+   GQ      
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315

Query: 161 AAKVIPIPTKVECLSGIF 178
            + + P  T   C   +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 25/150 (16%)

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  + K      V   G     +T   E++  G+N +GCLG G    +  P R       
Sbjct: 14  PQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRR------- 66

Query: 341 SPVDQIC-TSIVLVSCGW-KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 397
             +D +    IV +S G   H   + S+G++ +W            GH++  QLG+G+  
Sbjct: 67  --IDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSW------------GHNAYSQLGNGSTN 112

Query: 398 DYIHPTIVNFGE-NVKALQVSCGFNHTGAL 426
             + P  V+    N KA  V+CG +H+  L
Sbjct: 113 QALSPCQVSTNLINKKAHSVACGSHHSMVL 142


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P +IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           +GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +   L+   V   A G +    + + G VY++G     ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN---- 293

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            S +    P +    D+I   I + +C   HT+A     G +  WG
Sbjct: 294 KSNQSYPTPVTVEK-DRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG      +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTDEGQV 278

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 279 YAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G +    + + G VY++G     ++      +   P  ++ L    
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+     S +    P +    D+I   
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN----KSNQSYPTPVTVEK-DRI--- 286

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 287 IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 173

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 174 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 214

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 215 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 250



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  112 bits (279), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 101/337 (29%), Positives = 156/337 (46%), Gaps = 50/337 (14%)

Query: 44  GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           G+   G+LG+G  SL+ +  P++  A       ++ACG  HTL  TE G VY+ G   FG
Sbjct: 141 GSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFG 200

Query: 102 QLGISENIGYSLEP--LRIS----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            LG + N+     P  + IS      K +++Q+S G   S+ +   G +Y  G+N  GQL
Sbjct: 201 ALG-AGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQL 259

Query: 156 GLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           G+G +  + IPI  K   E +S I   Q  L     + +T  G V S GA   G+LG   
Sbjct: 260 GIGGRDQENIPISIKKFPERVSMIACGQMHL-----LMLTKQGTVYSCGANSFGQLG--- 311

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
               L   R++S  +P LI+++  + ++  AAG   ++   ++G +Y++G       +F 
Sbjct: 312 ----LNNKRNSS--SPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSG-----VFG 360

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           E     R   I  +  S  V  G +    +   G +Y+WG N +G LG            
Sbjct: 361 EFLTPHRVKTIKGMTVS--VSIGNHFGIAVNQDGIVYSWGHNNSGELG------------ 406

Query: 334 VQGPFSESPVDQICTS-----IVLVSCGWKHTAAISE 365
            QG F E P  QI        + LVSCG   + A+ +
Sbjct: 407 -QGDFDERPTPQIINQLNDKIVTLVSCGRNFSIALGQ 442



 Score =  105 bits (262), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 101/399 (25%), Positives = 167/399 (41%), Gaps = 60/399 (15%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LGLG  +  +  PV         +K ++CG  H  F+T    VY+ G N  G
Sbjct: 87  WGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSNTNG 146

Query: 102 QLGISE-NIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+ + ++     P+ +  L  ++ + I+ G +H+   T  G++Y WG+   G LG G 
Sbjct: 147 QLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALGAGN 206

Query: 160 KAAKVIP---------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
              + +P         + TK + +      Q + G   S  +   G+V + G   +G+LG
Sbjct: 207 LDDQFLPKLIHISHDQLSTKSQMI------QVSAGMRFSAILDQSGRVYTCGQNDAGQLG 260

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G             E  P  IK+    +V + A G +H   + + G VY  G  +  ++
Sbjct: 261 IGGRD---------QENIPISIKKFPE-RVSMIACGQMHLLMLTKQGTVYSCGANSFGQL 310

Query: 271 LFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 ++  P LI  + +     V  G +   +    G+LY WGS        G     
Sbjct: 311 GLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGS--------GVFGEF 362

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 387
            +P RV+          I    V VS G     A+++ G + +W            GH++
Sbjct: 363 LTPHRVK---------TIKGMTVSVSIGNHFGIAVNQDGIVYSW------------GHNN 401

Query: 388 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G+LG G+  +   P I+N   +     VSCG N + AL
Sbjct: 402 SGELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIAL 440


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 184/422 (43%), Gaps = 68/422 (16%)

Query: 33  STLQRRFAA-----LWGNGDYGRLGLGSL--------ESRWRPVVCSAFEKHSLKALACG 79
           S LQ  F+       WGNG  G+LG G +             P +  AFE  ++  +  G
Sbjct: 32  SALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFG 91

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
            +H+  + E G +Y  G N++ +LG+ E+      P  +  LK  ++V +S G + ++A+
Sbjct: 92  ASHSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAV 151

Query: 139 TVDGELYMW---GKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVT 193
             DG++Y W   G    G  GLG    K  P P  +  L   G+       G   +VA++
Sbjct: 152 DADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALS 211

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ +WG G  GRLG+G+         S +   P  I+      V   AAG   S  +
Sbjct: 212 KDGEIWAWGNGEYGRLGNGE---------SDTCEVPEPIEFFSKDNVVSIAAGRDFSFAL 262

Query: 254 DENGRVYIFGDRAVDKMLFQEG------NHARRPSLISKLP-YSEEVVCGGY-HTCVLTS 305
            +NG +Y +G  + +++    G      N    P L+      S + +  GY H   +T 
Sbjct: 263 TDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTD 322

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE 365
            G LY WGS            +   P  +      + V++    +V V+CG ++T A+SE
Sbjct: 323 DGRLYMWGSK-----------IWIEPHEM------TAVNEY--KMVQVACGRQYTVALSE 363

Query: 366 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 424
            G++ T+G G S+             LGHG+  + + P  +    +V    +SCG  H G
Sbjct: 364 NGEVFTFGKGSSNC------------LGHGDRKNQLQPVQIEALADVNITSISCGDYHMG 411

Query: 425 AL 426
           A+
Sbjct: 412 AI 413



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 162/373 (43%), Gaps = 53/373 (14%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLK----KEV 125
           ++LA   A     +    VY  G    GQLG    +   I  + E L    L+    K +
Sbjct: 26  RSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAI 85

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             +  G  HS+AI  DG+LY+WG N   +LGLG+ ++++  +P +VE L G+     + G
Sbjct: 86  THVEFGASHSAAIDEDGKLYVWGSNEYSKLGLGE-SSEMETLPREVEALKGVKIVDVSCG 144

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIA 243
              + AV   GK+ SWG GGS      + +  LG      E TPRL+  L  +GV +   
Sbjct: 145 DYFTAAVDADGKMYSWGWGGSTM----KGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTV 200

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
             G  H+  + ++G ++ +G+    ++   E +    P  I          +  G   + 
Sbjct: 201 ECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSF 260

Query: 302 VLTSGGELYTWGSNENGCLGIG---SIDV--LHSPERVQGPFSESPVDQICTSIVLVSCG 356
            LT  GELY+WG N    LGIG   ++DV  + S   +   F+   V QI       + G
Sbjct: 261 ALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQI-------AAG 313

Query: 357 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 415
           + H AA+++ G++  WG                          +I P  +      K +Q
Sbjct: 314 YDHAAAVTDDGRLYMWG-----------------------SKIWIEPHEMTAVNEYKMVQ 350

Query: 416 VSCGFNHTGALLE 428
           V+CG  +T AL E
Sbjct: 351 VACGRQYTVALSE 363



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 145/338 (42%), Gaps = 49/338 (14%)

Query: 113 LEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK------KAAKVI 165
           L  LR +G +  V + ++T      A +    +Y WG  + GQLG G       + A   
Sbjct: 12  LGALRAAGCRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEE 71

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             P  +E   G        G   S A+   GK+  WG+    +LG G+ S +        
Sbjct: 72  LTPKLLEAFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGLGESSEM-------- 123

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----DRAVDKMLFQEGNHARR 280
           E  PR ++ L+GVK+   + G   +A +D +G++Y +G      +    +    G     
Sbjct: 124 ETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPT 183

Query: 281 PSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           P L++ L         V CG +HT  L+  GE++ WG+ E G LG G  D    PE ++ 
Sbjct: 184 PRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEF 243

Query: 337 PFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN- 395
            FS+        ++V ++ G   + A+++   L + WGG          +S  QLG G  
Sbjct: 244 -FSKD-------NVVSIAAGRDFSFALTDNGEL-YSWGG----------NSQNQLGIGGG 284

Query: 396 ---DVDYIH--PTIVNFGENVKALQVSCGFNHTGALLE 428
              DV  I   P +V     +   Q++ G++H  A+ +
Sbjct: 285 LAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTD 322


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 13/207 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  DYG+LGLG+L+ +  P +  A     + ++ CG  H++  +  G +++ G ND GQL
Sbjct: 144 GRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQL 203

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           GI+ + G    P  +  LK    QI+ GY+H+ AI  +G+LY WGKN +GQLG+G  +AK
Sbjct: 204 GITGSDGNISLPKEVKNLKS--TQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAK 260

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            I +PT V  L        A G   ++A+   G++ S+G    G+LG G          +
Sbjct: 261 EI-LPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDG---------TT 310

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +   P LI+ L   KV   AAGF HS
Sbjct: 311 NNSCKPLLIQGLIDKKVCQIAAGFYHS 337



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 168/367 (45%), Gaps = 48/367 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQ-LGISENI---GYSLEPLRISGLK-------KE 124
           +A G  HTL LT+ G VY+ G N+ G  L    N      +    R   LK       K 
Sbjct: 6   VAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGKN 65

Query: 125 VVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           +V+I  S G  H  A+T +G+++ +G N  GQLG G + +  I  P +VE LS  F    
Sbjct: 66  IVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS--INSPKQVEALSRKFVTAV 123

Query: 183 ALGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              +  ++ +     ++ S G    G+LG       LG L   +  +P LI+ L G ++ 
Sbjct: 124 GCSYYHTIFSCADEMEIYSCGRNDYGQLG-------LGNLDDKN--SPTLIEALNGKRIV 174

Query: 242 IAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
               G  HS     +G ++ FG  D     +   +GN    P  +  L  S ++ CG YH
Sbjct: 175 SIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGN-ISLPKEVKNLK-STQIACGYYH 232

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKH 359
           T V  + G+LY+WG N++G LGIG    ++S + +         DQ    IV V+CG  H
Sbjct: 233 T-VAINNGQLYSWGKNDSGQLGIG----IYSAKEILPTLVRDLEDQ---EIVSVACGCYH 284

Query: 360 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 419
           T A+        G+ G   +F   G +S GQLG G   +   P ++    + K  Q++ G
Sbjct: 285 TLAL--------GYAGQLFSF---GRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG 333

Query: 420 FNHTGAL 426
           F H+  L
Sbjct: 334 FYHSIVL 340



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 18/261 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFGQLGISE 107
           G+LG G   S   P    A  +  + A+ C   HT+F   +   +Y+ G ND+GQLG+  
Sbjct: 96  GQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLG- 154

Query: 108 NIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N+     P  I  L  K +V I  G +HS   ++DGE++ +G+N +GQLG+       I 
Sbjct: 155 NLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGN-IS 213

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P +V+ L    + Q A G+  +VA+   G++ SWG   SG+LG G        + S  E
Sbjct: 214 LPKEVKNLK---STQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIG--------IYSAKE 261

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
             P L+++LE  ++   A G  H+  +   G+++ FG  +  ++     N++ +P LI  
Sbjct: 262 ILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQG 321

Query: 287 LPYSE--EVVCGGYHTCVLTS 305
           L   +  ++  G YH+ VL +
Sbjct: 322 LIDKKVCQIAAGFYHSIVLAN 342



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 143/319 (44%), Gaps = 50/319 (15%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQ-LGLGKKAAKVIPIPTK--------VECLS 175
           V+Q++ G  H+  +T  G++Y  G N  G  L  G  A                 VE L 
Sbjct: 3   VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR 62

Query: 176 G--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           G  I    A+ G E  +A+T  GKV S+G    G+LGHG ++SI          +P+ ++
Sbjct: 63  GKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSI---------NSPKQVE 113

Query: 234 ELEGVKVKIAAAGFLHS--ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            L    V      + H+  +C DE   +Y  G     ++     +    P+LI  L    
Sbjct: 114 ALSRKFVTAVGCSYYHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKR 172

Query: 292 EVV--CGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQICT 348
            V   CG YH+ V +  GE++++G N++G LGI GS   +  P+ V+   S         
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKSTQ------- 225

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNF 407
               ++CG+ HT AI+ G++ +WG   S            GQLG G      I PT+V  
Sbjct: 226 ----IACGYYHTVAINNGQLYSWGKNDS------------GQLGIGIYSAKEILPTLVRD 269

Query: 408 GENVKALQVSCGFNHTGAL 426
            E+ + + V+CG  HT AL
Sbjct: 270 LEDQEIVSVACGCYHTLAL 288



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 33/307 (10%)

Query: 70  KHSLKALACGGA-HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQ 127
           K+ +K  A  G  H + LT  G V++ G N  GQLG  +    +  P ++  L +K V  
Sbjct: 64  KNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSIN-SPKQVEALSRKFVTA 122

Query: 128 ISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +   Y+H+     D  E+Y  G+N  GQLGLG    K    PT +E L+G        G 
Sbjct: 123 VGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDK--NSPTLIEALNGKRIVSIGCGQ 180

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             SV  +  G++ S+G   SG+LG      I G     S+    L KE++ +K    A G
Sbjct: 181 YHSVVSSIDGEIFSFGRNDSGQLG------ITG-----SDGNISLPKEVKNLKSTQIACG 229

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSE--EVVCGGYHTC 301
           + H+  I+ NG++Y +G    D      G ++ +   P+L+  L   E   V CG YHT 
Sbjct: 230 YYHTVAIN-NGQLYSWGKN--DSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTL 286

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
            L   G+L+++G N +G LG G+ +    P  +QG   +    ++C     ++ G+ H+ 
Sbjct: 287 ALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDK----KVCQ----IAAGFYHSI 338

Query: 362 AISEGKI 368
            ++   I
Sbjct: 339 VLANPVI 345



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 43  WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  D G+LG+G   ++   P +    E   + ++ACG  HTL L   G +++ G N  G
Sbjct: 244 WGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHG 303

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHS 135
           QLG       S +PL I GL  K+V QI+ G++HS
Sbjct: 304 QLG-DGTTNNSCKPLLIQGLIDKKVCQIAAGFYHS 337


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 79  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 137

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 138 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 195

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 196 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 246

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 247 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 304

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 305 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 140/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 33  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 91

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 92  PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 151

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 152 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 201

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G +    + + G VY++G     ++      +   P  ++ L    
Sbjct: 202 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 261

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V         D+I   
Sbjct: 262 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT-----VEKDRI--- 313

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 314 IEIAACHSTHTSAAKTQGGHVYMWG 338



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 83  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 140

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 141 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 200

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 201 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 241

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 242 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 277



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 231 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 290

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 291 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 343

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 344 --SVILPHLTHFSCTDDVF 360


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 186/447 (41%), Gaps = 96/447 (21%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
           WG G YG LG G     + PV         S  +K ++               + G  H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHS 264

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
           +  T  G ++  G    G+LG+  N G SL P  +   L +++V ++ G  HS+ I   G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            LY WG    G+LG G +    IP+P KVE   G+   Q A G   ++A+T  G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG +   G G++ S  G + +     P+ + ++E   + I AAG  HSA +   G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434

Query: 263 GDRAVDKMLFQEGNHARRPSLISKL--------------------PYSEEVV-------- 294
           G     ++   +  +   P  ++ L                     YS+  V        
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494

Query: 295 ------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
                       CG  HT  LT  G ++ WGSN++G LG+G        E V+    E P
Sbjct: 495 TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLG--------EDVEEDQYE-P 545

Query: 343 VDQIC--TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
           V   C  T I  ++CG KH  A+++ G +  W            G +  GQLG G     
Sbjct: 546 VKLECFSTPIRRIACGSKHCLAVAQYGDVFAW------------GANDNGQLGLGVVRPS 593

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             P  V      +A+ V CG +++  +
Sbjct: 594 FEPAAVTALR--QAVDVFCGDDYSACI 618



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 68/343 (19%)

Query: 42  LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +WG+ D G+LGLG    E ++ PV    F    ++ +ACG  H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
            GQLG+   +  S EP  ++ L ++ V +  G  +S+ IT       V GE       L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTAL-RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639

Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
            WG   +G+LGLG+  A          V  +P               +V C+S  F+   
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G+  +WGAG  GRLG G          + + YTP      +GV+++ 
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL------PYSEEVVCG 296
            AAG  HS  +  +G ++ +G R   +      N+   P +  +L      P  + +   
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRR---EDTCSTTNYM-SPRIFMQLEGQGGVPKVKSISAS 803

Query: 297 GYHTCVLTSGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 336
             H+  +T  GE++ WG N   + GC G    + L  PERV G
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 173/428 (40%), Gaps = 86/428 (20%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
           +P      +K  +  ++CG  HTL L++ G +YA G+  +G LG  +    S  P+R+  
Sbjct: 171 KPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDT-SDSYTPVRVYL 229

Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
                SG KKE V +             S G  HS A T DG L+ WG   NG+LGLG  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              + P          I    A  G   S  +   G + +WG+GG GRLGHG +  I   
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNA--GDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP-- 345

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--- 277
                   PR ++   GV V   A G  H+  +   G V+ +G  A   + F EG     
Sbjct: 346 -------VPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG--AGLALGFGEGEDGSG 396

Query: 278 --ARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE-- 332
                P  +S +  +   +  G YH+  +T GG+L  WG   +  LG G       P+  
Sbjct: 397 GMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456

Query: 333 -------------------RVQGPFSE---------SPVDQICTSIVLVSCGWKHTAAIS 364
                              R++  +S+         S  +Q   ++  + CG  HT A++
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVN-FGENVKALQVSCGFN 421
            G    W W          G +  GQLG G DV  D   P  +  F   ++  +++CG  
Sbjct: 517 -GAGAVWVW----------GSNDDGQLGLGEDVEEDQYEPVKLECFSTPIR--RIACGSK 563

Query: 422 HTGALLEY 429
           H  A+ +Y
Sbjct: 564 HCLAVAQY 571



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 35/328 (10%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
           +L++L CG +HT+ LT  G V+  G ND GQLG+ E++     EP+++      + +I+ 
Sbjct: 501 TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIAC 560

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
           G  H  A+   G+++ WG N NGQLGLG      + A V  +   V+   G        +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITS 620

Query: 184 LGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQE---SSILGFLR----------STSEY 227
           LG  QSV+   G   G + +WGA  SG+LG G++    SIL   +          S    
Sbjct: 621 LGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSL 680

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--IS 285
             +  K +  V      +G  HS  I   G  Y +G     ++      +A  P+     
Sbjct: 681 EMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFP 740

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
           K      V  G  H+  L+  G+L+ WG  E+ C    S     SP        +  V +
Sbjct: 741 KGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC----STTNYMSPRIFMQLEGQGGVPK 796

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
           + +    +S   +H+ A++E G++  WG
Sbjct: 797 VKS----ISASERHSLAVTEAGEVFAWG 820



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 143/327 (43%), Gaps = 66/327 (20%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF---------EKHSLKALACGGAHTL---FLTETG 90
           WG  D G+LGLG +   + P   +A          + +S    + GGA ++     TE G
Sbjct: 577 WGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFG 636

Query: 91  CVYATGLNDFGQLGISENIGY------------------SLEPLRISGLKK----EVVQI 128
            ++A G  + G+LG+ E++                    SL+ L +   K+        +
Sbjct: 637 DLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPL 696

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            +G  HS AIT  GE Y WG    G+LG+G  A      PT+ +   G+  +  A G   
Sbjct: 697 CSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAY--TPTRCDFPKGVRLRSVAAGACH 754

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY-TPRLIKELEG----VKVKIA 243
           S+A++  G +  WG          +E +      ST+ Y +PR+  +LEG     KVK  
Sbjct: 755 SLALSMDGDLWFWGR---------REDTC-----STTNYMSPRIFMQLEGQGGVPKVKSI 800

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR------RPSLISKLPYS-EEVVCG 296
           +A   HS  + E G V+ +G    D  L+Q G   R      RP  ++ LP + + V  G
Sbjct: 801 SASERHSLAVTEAGEVFAWG----DNKLYQTGCGKRQAERLDRPERVAGLPSACQWVATG 856

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
              +  + + GE++  G  ++G LG G
Sbjct: 857 PQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 150/393 (38%), Gaps = 98/393 (24%)

Query: 68  FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           F   S+K +A G  HTL +   G    ++  G N    LG+   I   + P  +    K 
Sbjct: 43  FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102

Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
              ++S G ++S+ +        G++Y +G  + G+LG  K  A  +             
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162

Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                  P P++V         + + G + ++A++  G + +WG G  G LG G  S   
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTS--- 219

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   YTP                            RVY+  +    K     G   
Sbjct: 220 ------DSYTPV---------------------------RVYLGSEAGSGKKKENVGVGK 246

Query: 279 RRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R   +        V C   G  H+   TS G L+TWG   NG LG+G     H+    +
Sbjct: 247 VRADPVI-------VTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLG-----HN----R 290

Query: 336 GPFSESPVDQICT-SIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
           G  S + VD I    IV V+ G  H+A I  +G + TWG GG             G+LGH
Sbjct: 291 GSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGF------------GRLGH 338

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+  +   P  V     V  LQV+CG  HT AL
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLAL 371


>gi|296445916|ref|ZP_06887867.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
 gi|296256584|gb|EFH03660.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
          Length = 492

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 145/334 (43%), Gaps = 30/334 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LG G++  R  PV  S      + A++ G  H+  LT  G V   G N  GQ
Sbjct: 115 WGRNDYGQLGDGTMVRRSSPVSVSGLPS-DIVAISMGDGHSCALTSAGAVECWGWNQVGQ 173

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  ++ L   VV I++G  HS A+T  G +  WG N  GQLG G    
Sbjct: 174 LGDGTYPNRS-APGVVTRLSSGVVAIASGDVHSCALTSVGAVKCWGSNVAGQLGAGTPTY 232

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              PI      ++G+ +   A+  G + S A+   G V  WG+   G+LG G  ++    
Sbjct: 233 HRTPI-----GVTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTAN---- 283

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                  TP  +  L    V I A G+ HS  + + G V  +GD +  ++          
Sbjct: 284 -----RATPVAVPSLSSGVVAITA-GWGHSCALTKAGAVVCWGDNSNGQIGDGTTTTRHT 337

Query: 281 PSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P ++S L      +  G  H C L   G +  WGSN++G LG  ++    +P  V G   
Sbjct: 338 PVVVSGLTSGVVAIATGSNHNCALKGNGAVLCWGSNQDGVLGDRTMTNRTTPVAVPGHTR 397

Query: 340 ESPVDQICTSIVLVSCGWKHT-AAISEGKILTWG 372
                     +V ++ G  HT   IS G +  WG
Sbjct: 398 ---------GVVAIALGSDHTCVTISSGVVRCWG 422



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 132/286 (46%), Gaps = 20/286 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  P V +      + A+A G  H+  LT  G V   G N  GQ
Sbjct: 166 WGWNQVGQLGDGTYPNRSAPGVVTRLSS-GVVAIASGDVHSCALTSVGAVKCWGSNVAGQ 224

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      Y   P+ ++GL+  VV I+ G  HS A+   G +  WG NS+GQLG G  A 
Sbjct: 225 LGAGTPT-YHRTPIGVTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTAN 283

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+       SG+    A  G+  S A+T  G V+ WG   +G++G G          
Sbjct: 284 RATPVAVP-SLSSGVVAITA--GWGHSCALTKAGAVVCWGDNSNGQIGDGT--------- 331

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+ +TP ++  L    V I A G  H+  +  NG V  +G       +  +     R +
Sbjct: 332 TTTRHTPVVVSGLTSGVVAI-ATGSNHNCALKGNGAVLCWGSN--QDGVLGDRTMTNRTT 388

Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++   ++  VV    G  HTCV  S G +  WGS+  G LG G+ 
Sbjct: 389 PVAVPGHTRGVVAIALGSDHTCVTISSGVVRCWGSDGLGQLGDGTF 434



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 138/302 (45%), Gaps = 31/302 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           L+ GG H+  L   G V   G ND+GQLG    +  S  P+ +SGL  ++V IS G  HS
Sbjct: 96  LSMGGQHSCALPAAGGVSCWGRNDYGQLGDGTMVRRS-SPVSVSGLPSDIVAISMGDGHS 154

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTG 194
            A+T  G +  WG N  GQLG G    +  P + T++   SG+     A G   S A+T 
Sbjct: 155 CALTSAGAVECWGWNQVGQLGDGTYPNRSAPGVVTRLS--SGVV--AIASGDVHSCALTS 210

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V  WG+  +G+LG G           T   TP  +  L    V I A G  HS  + 
Sbjct: 211 VGAVKCWGSNVAGQLGAGTP---------TYHRTPIGVTGLRSGVVAI-AGGNQHSCALA 260

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
             G V  +G  +  ++   +G  A R + ++    S  VV    G  H+C LT  G +  
Sbjct: 261 TAGAVKCWGSNSHGQL--GDGTTANRATPVAVPSLSSGVVAITAGWGHSCALTKAGAVVC 318

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILT 370
           WG N NG +G G+    H+P  V G         + + +V ++ G  H  A+   G +L 
Sbjct: 319 WGDNSNGQIGDGTTTTRHTPVVVSG---------LTSGVVAIATGSNHNCALKGNGAVLC 369

Query: 371 WG 372
           WG
Sbjct: 370 WG 371



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 41/303 (13%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA--LG 185
           +S G  HS A+   G +  WG+N  GQLG G    +  P+      +SG+ +   A  +G
Sbjct: 96  LSMGGQHSCALPAAGGVSCWGRNDYGQLGDGTMVRRSSPV-----SVSGLPSDIVAISMG 150

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S A+T  G V  WG    G+LG G   +            P ++  L    V IA+ 
Sbjct: 151 DGHSCALTSAGAVECWGWNQVGQLGDGTYPN---------RSAPGVVTRLSSGVVAIAS- 200

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG-YHTCVLT 304
           G +HS  +   G V  +G     ++      + R P  ++ L      + GG  H+C L 
Sbjct: 201 GDVHSCALTSVGAVKCWGSNVAGQLGAGTPTYHRTPIGVTGLRSGVVAIAGGNQHSCALA 260

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS 364
           + G +  WGSN +G LG G+     +P  V           + + +V ++ GW H+ A++
Sbjct: 261 TAGAVKCWGSNSHGQLGDGTTANRATPVAVP---------SLSSGVVAITAGWGHSCALT 311

Query: 365 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 423
           + G ++ W            G +S GQ+G G       P +V+ G     + ++ G NH 
Sbjct: 312 KAGAVVCW------------GDNSNGQIGDGTTTTRHTPVVVS-GLTSGVVAIATGSNHN 358

Query: 424 GAL 426
            AL
Sbjct: 359 CAL 361



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 114/294 (38%), Gaps = 52/294 (17%)

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + + +  +V+ L G  T    +GF       G G +  +GAG +     GQ S  L 
Sbjct: 50  KLGQTVKLVGEVDGLGGAPT--GTVGFADGAITLGAGPLSPYGAGQATLSMGGQHSCALP 107

Query: 220 FLRSTS-----------------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
                S                   +P  +  L    V I + G  HS  +   G V  +
Sbjct: 108 AAGGVSCWGRNDYGQLGDGTMVRRSSPVSVSGLPSDIVAI-SMGDGHSCALTSAGAVECW 166

Query: 263 GDRAVDKMLFQEGNHARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           G   V ++   +G +  R  P ++++L      +  G  H+C LTS G +  WGSN  G 
Sbjct: 167 GWNQVGQL--GDGTYPNRSAPGVVTRLSSGVVAIASGDVHSCALTSVGAVKCWGSNVAGQ 224

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHG 378
           LG G+     +P  V G         + + +V ++ G +H+ A+ + G +  W       
Sbjct: 225 LGAGTPTYHRTPIGVTG---------LRSGVVAIAGGNQHSCALATAGAVKCW------- 268

Query: 379 TFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQV----SCGFNHTGALL 427
                G +S GQLG G   +   P  V +    V A+      SC     GA++
Sbjct: 269 -----GSNSHGQLGDGTTANRATPVAVPSLSSGVVAITAGWGHSCALTKAGAVV 317


>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
           echinatior]
          Length = 771

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 33/296 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLG      +P      +   +  +ACG AHTL  T    ++A G N  G
Sbjct: 105 IFGSNDWGQLGLGHRNHISKPSCVKILKPERVTHVACGRAHTLICTGAQKIFACGSNQEG 164

Query: 102 QLGISENI--GYSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           QLG   ++    S  P+ I   GL    ++Q++ G HHS A+T DG +  WG N  GQLG
Sbjct: 165 QLGRENSVIGDSSSSPILIYDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLG 224

Query: 157 LGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           L + +  V     +PIP  V        K+ + G+  SV +T  G +   G   SG+LG 
Sbjct: 225 LPEISGLVYKPMKVPIPEPV--------KEISAGYYHSVFLTESGLIYICGESESGKLGL 276

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
                 + F   +++  P+ + +L    + +A  G  H+  + ENG +Y  G  A  ++ 
Sbjct: 277 N-----INF---STQVAPKQM-QLPAPALHVACGGH-HTFILAENGNIYCSGSNASGQLG 326

Query: 271 LFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           +    N    P L+ +    +E    +VCG  H+ +LT  G+L+T G   +G LG+
Sbjct: 327 MGINVNETPTPKLLPRGALQDEKIIKIVCGESHSAILTESGKLFTCGDGRHGKLGL 382



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 160/334 (47%), Gaps = 31/334 (9%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   + S F   K  +  + CG  H+  + +TG ++  G ND+GQLG+      S +P
Sbjct: 67  SRFADNIASHFFIRKDPVVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHIS-KP 125

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPT 169
             +  LK E V  ++ G  H+   T   +++  G N  GQLG     +G  ++  I I  
Sbjct: 126 SCVKILKPERVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSSPILI-- 183

Query: 170 KVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             +C L+G    Q A G   S+A+T  G V++WG+   G+LG  + S ++        Y 
Sbjct: 184 -YDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLV--------YK 234

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P  +   E VK    +AG+ HS  + E+G +YI G+    K+        +      +LP
Sbjct: 235 PMKVPIPEPVKE--ISAGYYHSVFLTESGLIYICGESESGKLGLNINFSTQVAPKQMQLP 292

Query: 289 YSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC 347
                V CGG+HT +L   G +Y  GSN +G LG+G I+V  +P     P      ++  
Sbjct: 293 APALHVACGGHHTFILAENGNIYCSGSNASGQLGMG-INVNETPTPKLLPRGALQDEK-- 349

Query: 348 TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTF 380
             I+ + CG  H+A ++E GK+ T G  G HG  
Sbjct: 350 --IIKIVCGESHSAILTESGKLFTCG-DGRHGKL 380



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 41/253 (16%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S  V   G++  +G+   G+LG G  + I           P  +K L+  +V   A
Sbjct: 90  GDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHI---------SKPSCVKILKPERVTHVA 140

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKL----PYSEEVVCGG 297
            G  H+       +++  G     ++  +    G+ +  P LI       P   ++  G 
Sbjct: 141 CGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSSPILIYDCGLAGPRIIQLAAGS 200

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSID-VLHSPERVQGPFSESPVDQICTSIVLVSCG 356
           +H+  LTS G +  WGSN  G LG+  I  +++ P +V  P    PV +I       S G
Sbjct: 201 HHSMALTSDGGVVAWGSNLEGQLGLPEISGLVYKPMKVPIP---EPVKEI-------SAG 250

Query: 357 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDYIHPTIVNFGENVKALQ 415
           + H+  ++E  ++              G S  G+LG + N    + P  +       AL 
Sbjct: 251 YYHSVFLTESGLIYIC-----------GESESGKLGLNINFSTQVAPKQMQLP--APALH 297

Query: 416 VSCGFNHTGALLE 428
           V+CG +HT  L E
Sbjct: 298 VACGGHHTFILAE 310


>gi|223973351|gb|ACN30863.1| unknown [Zea mays]
          Length = 408

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 177/411 (43%), Gaps = 62/411 (15%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG G  G+LG G  +     +P++     +  +  +A GGAH + LT  G V+  G    
Sbjct: 30  WGAGTDGQLGNGGFDDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWGRGTH 89

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N+     P  +  L+   V  +S G++HS   T  G+L+M G  S GQLG G 
Sbjct: 90  GQLG-HGNLDNMPHPKLVKFLENHTVTCVSAGWNHSGFATDSGQLFMCGDGSFGQLGTGD 148

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++  P   +V   +    ++ A G   S+ +     V  +G+   G++G         
Sbjct: 149 NLSRNFPF--EVAYFNATHIEKLAFGMRHSLVLLKDNSVYGFGSARRGQVGKCAS----- 201

Query: 220 FLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
             R    Y  PRLI      K+    A   HSA +DE+G +Y++G     + L  + +  
Sbjct: 202 --RIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWG-----RALIGQHDDD 254

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG---SNENGCLGIGSIDVLHSPERVQ 335
           +   ++  L  S+  V  G+H  ++ S GELYT G     +    G+G++    S  R  
Sbjct: 255 QPSEILPSLSVSQ--VALGWHHALVLSAGELYTLGVYRHQKCDLPGLGNVLGQQSDTRAT 312

Query: 336 G---------------PFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGT 379
                           PF +         +  ++ G +H+A +++ G + TWGWG     
Sbjct: 313 SSSHDCSSSLSVLETVPFLDG------EQVAQIASGTEHSALVTDKGTVFTWGWG----- 361

Query: 380 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ----VSCGFNHTGAL 426
                    GQLG G+  D++ P  VN G+N + +     V CG   T A+
Sbjct: 362 -------EHGQLGLGDTSDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 405



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 23/158 (14%)

Query: 274 EGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           + +H  +P L+     S    V  GG H   LTS GE++TWG   +G LG G++D +  P
Sbjct: 44  DDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGNLDNMPHP 103

Query: 332 ERVQGPFSESPVDQICTSIVLVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQ 390
           + V+  F E+       ++  VS GW H+  A   G++   G     G+F        GQ
Sbjct: 104 KLVK--FLEN------HTVTCVSAGWNHSGFATDSGQLFMCG----DGSF--------GQ 143

Query: 391 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
           LG G+++    P  V +       +++ G  H+  LL+
Sbjct: 144 LGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLK 181


>gi|427788267|gb|JAA59585.1| Putative e3 ubiquitin-protein ligase herc3 [Rhipicephalus
           pulchellus]
          Length = 458

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 145/311 (46%), Gaps = 36/311 (11%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKE 124
           E   +  +ACG +H++ LT+    ++ G N FGQ G      E+      P ++ G++ +
Sbjct: 167 ESTRILRVACGRSHSIVLTDKEGAFSFGNNSFGQCGRPVVTDESPESCATPRQVQGIRGK 226

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +V +  G  H+  +T +G +Y  G +++GQ GLG   ++  P     + LSG+   + A 
Sbjct: 227 IVDVVCGQDHTLFLTDEGAVYSCGWSADGQTGLGIYGSQGTPKRVNGD-LSGVHIVRIAG 285

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
             +  +AV+  G +  WG    G+ G   +   + F R+ +             KVK  A
Sbjct: 286 TVDCILAVSDSGDLFGWGNSEYGQFGRQTDDKQMCFARNLN---------FPHGKVKAVA 336

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK--------LPYSE--EVV 294
           +G      + E+G VY++G   +   L  E +    P+L+ +         P ++  ++ 
Sbjct: 337 SGGTMCGVVTESGDVYVWGYGLLG--LGPEVSVKTVPTLLPRPLFGANRFAPDTQVVDLF 394

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVS 354
           CG  H   L S GELYTWG N NGCLG+G     H P RV           +   I+ VS
Sbjct: 395 CGLNHFAALNSRGELYTWGKNRNGCLGLGHSMDQHFPFRV----------SLTAKILKVS 444

Query: 355 CGWKHTAAISE 365
           CG  HTA +S+
Sbjct: 445 CGVDHTAVLSQ 455



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 166/402 (41%), Gaps = 56/402 (13%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF------LTETGCVYATGLNDFGQLG 104
           LG        +P      E +++  +ACG   TL       +     VY TG+N   QLG
Sbjct: 82  LGYAPRAGHHKPYRLPFSEFYTVDDVACGYGFTLLSAQEDRIKNPSKVYGTGINTDFQLG 141

Query: 105 ------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
                       ++E +G    PL +      +++++ G  HS  +T     + +G NS 
Sbjct: 142 YQCARKGHPLKVLTEPVGI---PLPLKSESTRILRVACGRSHSIVLTDKEGAFSFGNNSF 198

Query: 153 GQLG---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           GQ G   +  ++ +    P +V+ + G        G + ++ +T  G V S G    G+ 
Sbjct: 199 GQCGRPVVTDESPESCATPRQVQGIRGKIV-DVVCGQDHTLFLTDEGAVYSCGWSADGQT 257

Query: 210 GHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           G G    I G     S+ TP+ +  +L GV +   A        + ++G ++ +G+    
Sbjct: 258 GLG----IYG-----SQGTPKRVNGDLSGVHIVRIAGTVDCILAVSDSGDLFGWGNSEYG 308

Query: 269 KMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-I 325
           +   Q  +     +     P+   + V  GG    V+T  G++Y WG    G LG+G  +
Sbjct: 309 QFGRQTDDKQMCFARNLNFPHGKVKAVASGGTMCGVVTESGDVYVWGY---GLLGLGPEV 365

Query: 326 DVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 384
            V   P  +  P   +      T +V + CG  H AA+ S G++ TW            G
Sbjct: 366 SVKTVPTLLPRPLFGANRFAPDTQVVDLFCGLNHFAALNSRGELYTW------------G 413

Query: 385 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            +  G LG G+ +D   P  V+     K L+VSCG +HT  L
Sbjct: 414 KNRNGCLGLGHSMDQHFPFRVSL--TAKILKVSCGVDHTAVL 453


>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Ailuropoda melanoleuca]
          Length = 348

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G    +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            K    E   C   HT    T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
                   +P  I   +   V+IAA    H SA   + G VY++G 
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 32/299 (10%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITVD 141
           L++T+   V+  GLN    LG  +N   +L P ++  L  K++  +S G   H    T D
Sbjct: 35  LYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
           G +Y WG N   QLG G     + PI    +  + +  KQ    A G   S+A+   G+V
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPI----QVCTNLLIKQVVEVACGSHHSMALAADGEV 149

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENG 257
            +WG    G++G G          +T++ TPR +     +K  +  A G   S  + +NG
Sbjct: 150 FAWGYNNCGQVGSGS---------TTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      +   P  ++ L      ++VCG  HT  LT  G LY WG+N
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
             G LG G+ + L SP  +     +  V +I       +C   HT+A     G +  WG
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEI------AACHSAHTSAAKTQGGHVYMWG 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEITSIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSAHTSA 299



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + V+P  T   C   +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 33/247 (13%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
            +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G
Sbjct: 32  NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82

Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
              H     E+G VY +G     ++     N    P  +     +    EV CG +H+  
Sbjct: 83  SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           L + GE++ WG N  G +G GS     +P +V               +V ++CG   + A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLH-------IKRVVGIACGQTSSMA 195

Query: 363 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 421
           +   G++  WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ 
Sbjct: 196 VLDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYA 243

Query: 422 HTGALLE 428
           HT AL +
Sbjct: 244 HTLALTD 250


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 81  GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P +IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 140 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 248

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 35  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 94  PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 153

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G +    + + G VY++G     ++      +   P  ++ L    
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 263

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+     S +    P +    D+I   
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN----KSNQSYPTPVTVEK-DRI--- 315

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 316 IEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 85  LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 142

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 143 HGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 202

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 203 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 243

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 244 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 279



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A+L +      V  T  
Sbjct: 67  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 122

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLVLTS 174

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG      +   GE+Y W
Sbjct: 175 DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 234

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 235 GYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTDEGQV 283

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 284 YAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362


>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1190

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 172/421 (40%), Gaps = 70/421 (16%)

Query: 40   AALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKAL---------ACGGAHTLFLTE 88
            A  WG    G LG G  S  +R  PV+    ++ +   L         + G  H+L +  
Sbjct: 693  AYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVSAGSQHSLAVGS 752

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKEV--VQISTGYHHSSAITVDGE 143
             G  YA G ND G+LG   +      P+R+   +G   +   VQ+S GYHHS A+  DG 
Sbjct: 753  DGNAYAWGRNDDGRLGDGTSTDQHT-PVRVKKPAGTSTDFTYVQVSAGYHHSLALGSDGN 811

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVL 199
             Y WG N++GQLG G    +   +  +V+  +G  T     Q + G   S+A+   G   
Sbjct: 812  AYAWGYNNSGQLGDGTSTDRATSV--RVKKPAGTSTDFTYVQVSAGAFHSLALGSDGNAY 869

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA----AAGFLHSACIDE 255
            +WG    G+LG G          ST   TP  +    G           AG+LHS  +  
Sbjct: 870  AWGLNNFGQLGDGT---------STDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAVGS 920

Query: 256  NGRVYIFGDRAVDKM-------LFQEGNHARR------PSLISKLPYSEEVVCGGYHTCV 302
            +G  Y +G     ++        F    +  R      P+   K   +  V  G +H+  
Sbjct: 921  DGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAGFWHSLA 980

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQIC-TSIVLVSCGWKHTA 361
            L S G  Y WG N NG LG  S      P  V    S SP D       VLVS G  H+ 
Sbjct: 981  LGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSD--SASPTDTSKGLKAVLVSTGQYHSL 1038

Query: 362  AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 420
            A+ S+G    WG         ++G+   GQLG+ N +    PT  N  E    + V   F
Sbjct: 1039 ALGSDGNAYAWG---------DNGY---GQLGN-NSI----PTGSNNNEARSPVPVPVVF 1081

Query: 421  N 421
            N
Sbjct: 1082 N 1082



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 140/335 (41%), Gaps = 35/335 (10%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYAT 95
            A  WG  D GRLG G+   +  PV        S       ++ G  H+L L   G  YA 
Sbjct: 756  AYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYHHSLALGSDGNAYAW 815

Query: 96   GLNDFGQLG--ISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNS 151
            G N+ GQLG   S +   S+   + +G   +   VQ+S G  HS A+  DG  Y WG N+
Sbjct: 816  GYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAFHSLALGSDGNAYAWGLNN 875

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGSG 207
             GQLG G    +  P+  KV   +G  T     Q   G+  S+AV   G   +WG   SG
Sbjct: 876  FGQLGDGTSTDRATPV--KVGTPAGTPTDFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSG 933

Query: 208  RLGHGQE----SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +LG+  +    S     +R  +  +P    +  G+K     AGF HS  +  +G  Y +G
Sbjct: 934  QLGNNSKGGFFSPNPNPVRVRNPASPNDADK--GLKAVNVTAGFWHSLALGSDGNAYAWG 991

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGS 314
              +  ++       +  P L+S      +         V  G YH+  L S G  Y WG 
Sbjct: 992  FNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQYHSLALGSDGNAYAWGD 1051

Query: 315  NENGCLGIGSIDV------LHSPERVQGPFSESPV 343
            N  G LG  SI          SP  V   F+  PV
Sbjct: 1052 NGYGQLGNNSIPTGSNNNEARSPVPVPVVFNLPPV 1086



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 161/389 (41%), Gaps = 77/389 (19%)

Query: 83   TLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEV----------VQIS 129
            +L +   G  YA G N  G+LG    SEN   +  P+ +    ++           VQ+S
Sbjct: 684  SLAVGSDGNAYAWGGNKKGELGDGTTSENARST--PVMVKQPDRKTYPDLPADFTYVQVS 741

Query: 130  TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK----QAALG 185
             G  HS A+  DG  Y WG+N +G+LG G    +  P+  +V+  +G  T     Q + G
Sbjct: 742  AGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPV--RVKKPAGTSTDFTYVQVSAG 799

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-- 243
            +  S+A+   G   +WG   SG+LG G          ST   T   +K+  G        
Sbjct: 800  YHHSLALGSDGNAYAWGYNNSGQLGDGT---------STDRATSVRVKKPAGTSTDFTYV 850

Query: 244  --AAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQEGNHARRPSLISKLP 288
              +AG  HS  +  +G  Y +G             DRA      + G  A  P+  +   
Sbjct: 851  QVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRAT---PVKVGTPAGTPTDFTY-- 905

Query: 289  YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE----RVQGPFSESPVD 344
               ++  G  H+  + S G  Y WG N +G LG  S     SP     RV+ P S +  D
Sbjct: 906  --AQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDAD 963

Query: 345  QICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 404
            +   ++ + +  W   A  S+G    WG+            +S GQLG+ +  D   P +
Sbjct: 964  KGLKAVNVTAGFWHSLALGSDGNAYAWGF------------NSNGQLGNNSSKDSTVPVL 1011

Query: 405  V-------NFGENVKALQVSCGFNHTGAL 426
            V       +  + +KA+ VS G  H+ AL
Sbjct: 1012 VSDSASPTDTSKGLKAVLVSTGQYHSLAL 1040



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 140/341 (41%), Gaps = 54/341 (15%)

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE--- 172
           +R S +        T +  S A+  DG  Y WG N  G+LG G  +      P  V+   
Sbjct: 665 IRFSQVSASSFVSVTDFGFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPD 724

Query: 173 -----CLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
                 L   FT  Q + G + S+AV   G   +WG    GRLG G          ST +
Sbjct: 725 RKTYPDLPADFTYVQVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGT---------STDQ 775

Query: 227 YTPRLIKELEGVKVKIA----AAGFLHSACIDENGRVYIFG-------------DRAVDK 269
           +TP  +K+  G          +AG+ HS  +  +G  Y +G             DRA   
Sbjct: 776 HTPVRVKKPAGTSTDFTYVQVSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSV 835

Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
            +       ++P+  S      +V  G +H+  L S G  Y WG N  G LG G+     
Sbjct: 836 RV-------KKPAGTSTDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRA 888

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSEDGHS 386
           +P +V  P + +P D     I     G+ H+ A+ S+G    WG+   G  G  S+ G  
Sbjct: 889 TPVKVGTP-AGTPTDFTYAQI---GAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFF 944

Query: 387 SGGQLGHGNDVDYIHPTIVNFGEN-VKALQVSCGFNHTGAL 426
           S     + N V   +P   N  +  +KA+ V+ GF H+ AL
Sbjct: 945 S----PNPNPVRVRNPASPNDADKGLKAVNVTAGFWHSLAL 981



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 64/158 (40%), Gaps = 30/158 (18%)

Query: 39   FAALWGNGDYGRLGLGSL---------ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLT 87
            +A  WG    G+LG  S            R R           LKA+    G  H+L L 
Sbjct: 923  YAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAGFWHSLALG 982

Query: 88   ETGCVYATGLNDFGQLGISEN--------IGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
              G  YA G N  GQLG + +        +  S  P   S GLK   V +STG +HS A+
Sbjct: 983  SDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLK--AVLVSTGQYHSLAL 1040

Query: 139  TVDGELYMWGKNSNGQLG--------LGKKAAKVIPIP 168
              DG  Y WG N  GQLG           +A   +P+P
Sbjct: 1041 GSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVP 1078


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 186/447 (41%), Gaps = 96/447 (21%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
           WG G YG LG G     + PV         S  +K ++               + G  H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHS 264

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
           +  T  G ++  G    G+LG+  N G SL P  +   L +++V ++ G  HS+ I   G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            LY WG    G+LG G +    IP+P KVE   G+   Q A G   ++A+T  G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG +   G G++ S  G + +     P+ + ++E   + I AAG  HSA +   G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434

Query: 263 GDRAVDKMLFQEGNHARRPSLISKL--------------------PYSEEVV-------- 294
           G     ++   +  +   P  ++ L                     YS+  V        
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494

Query: 295 ------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
                       CG  HT  LT  G ++ WGSN++G LG+G        E V+    E P
Sbjct: 495 TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLG--------EDVEEDQYE-P 545

Query: 343 VDQIC--TSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 399
           V   C  T I  ++CG KH  A+++ G +  W            G +  GQLG G     
Sbjct: 546 VKLECFSTPIRRIACGSKHCLAVAQYGDVFAW------------GANDNGQLGLGVVRPS 593

Query: 400 IHPTIVNFGENVKALQVSCGFNHTGAL 426
             P  V      +A+ V CG +++  +
Sbjct: 594 FEPAAVTALR--QAVDVFCGDDYSACI 618



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 68/343 (19%)

Query: 42  LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +WG+ D G+LGLG    E ++ PV    F    ++ +ACG  H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
            GQLG+   +  S EP  ++ L ++ V +  G  +S+ IT       V GE       L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTAL-RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639

Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
            WG   +G+LGLG+  A          V  +P               +V C+S  F+   
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G+  +WGAG  GRLG G          + + YTP      +GV+++ 
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL------PYSEEVVCG 296
            AAG  HS  +  +G ++ +G R   +      N+   P +  +L      P  + +   
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRR---EDTCSTTNYM-SPRIFMQLEGQGGVPKVKSISAS 803

Query: 297 GYHTCVLTSGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 336
             H+  +T  GE++ WG N   + GC G    + L  PERV G
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 173/428 (40%), Gaps = 86/428 (20%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
           +P      +K  +  ++CG  HTL L++ G +YA G+  +G LG  +    S  P+R+  
Sbjct: 171 KPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDT-SDSYTPVRVYL 229

Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
                SG KKE V +             S G  HS A T DG L+ WG   NG+LGLG  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              + P          I    A  G   S  +   G + +WG+GG GRLGHG +  I   
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNA--GDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP-- 345

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--- 277
                   PR ++   GV V   A G  H+  +   G V+ +G  A   + F EG     
Sbjct: 346 -------VPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG--AGLALGFGEGEDGSG 396

Query: 278 --ARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE-- 332
                P  +S +  +   +  G YH+  +T GG+L  WG   +  LG G       P+  
Sbjct: 397 GMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456

Query: 333 -------------------RVQGPFSE---------SPVDQICTSIVLVSCGWKHTAAIS 364
                              R++  +S+         S  +Q   ++  + CG  HT A++
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516

Query: 365 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVN-FGENVKALQVSCGFN 421
            G    W W          G +  GQLG G DV  D   P  +  F   ++  +++CG  
Sbjct: 517 -GAGAVWVW----------GSNDDGQLGLGEDVEEDQYEPVKLECFSTPIR--RIACGSK 563

Query: 422 HTGALLEY 429
           H  A+ +Y
Sbjct: 564 HCLAVAQY 571



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 35/328 (10%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
           +L++L CG +HT+ LT  G V+  G ND GQLG+ E++     EP+++      + +I+ 
Sbjct: 501 TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIAC 560

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
           G  H  A+   G+++ WG N NGQLGLG      + A V  +   V+   G        +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITS 620

Query: 184 LGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQE---SSILGFLR----------STSEY 227
           LG  QSV+   G   G + +WGA  SG+LG G++    SIL   +          S    
Sbjct: 621 LGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSL 680

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--IS 285
             +  K +  V      +G  HS  I   G  Y +G     ++      +A  P+     
Sbjct: 681 EMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFP 740

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
           K      V  G  H+  L+  G+L+ WG  E+ C    S     SP        +  V +
Sbjct: 741 KGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC----STTNYMSPRIFMQLEGQGGVPK 796

Query: 346 ICTSIVLVSCGWKHTAAISE-GKILTWG 372
           + +    +S   +H+ A++E G++  WG
Sbjct: 797 VKS----ISASERHSLAVTEAGEVFAWG 820



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 143/327 (43%), Gaps = 66/327 (20%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF---------EKHSLKALACGGAHTL---FLTETG 90
           WG  D G+LGLG +   + P   +A          + +S    + GGA ++     TE G
Sbjct: 577 WGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFG 636

Query: 91  CVYATGLNDFGQLGISENIGY------------------SLEPLRISGLKK----EVVQI 128
            ++A G  + G+LG+ E++                    SL+ L +   K+        +
Sbjct: 637 DLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPL 696

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            +G  HS AIT  GE Y WG    G+LG+G  A      PT+ +   G+  +  A G   
Sbjct: 697 CSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAY--TPTRCDFPKGVRLRSVAAGACH 754

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY-TPRLIKELEG----VKVKIA 243
           S+A++  G +  WG          +E +      ST+ Y +PR+  +LEG     KVK  
Sbjct: 755 SLALSMDGDLWFWGR---------REDTC-----STTNYMSPRIFMQLEGQGGVPKVKSI 800

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR------RPSLISKLPYS-EEVVCG 296
           +A   HS  + E G V+ +G    D  L+Q G   R      RP  ++ LP + + V  G
Sbjct: 801 SASERHSLAVTEAGEVFAWG----DNKLYQTGCGKRQAERLDRPERVAGLPSACQWVATG 856

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
              +  + + GE++  G  ++G LG G
Sbjct: 857 PQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 150/393 (38%), Gaps = 98/393 (24%)

Query: 68  FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           F   S+K +A G  HTL +   G    ++  G N    LG+   I   + P  +    K 
Sbjct: 43  FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102

Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
              ++S G ++S+ +        G++Y +G  + G+LG  K  A  +             
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162

Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                  P P++V         + + G + ++A++  G + +WG G  G LG G  S   
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTS--- 219

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   YTP                            RVY+  +    K     G   
Sbjct: 220 ------DSYTPV---------------------------RVYLGSEAGSGKKKENVGVGK 246

Query: 279 RRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R   +        V C   G  H+   TS G L+TWG   NG LG+G     H+    +
Sbjct: 247 VRADPVV-------VTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLG-----HN----R 290

Query: 336 GPFSESPVDQICT-SIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 393
           G  S + VD I    IV V+ G  H+A I  +G + TWG GG             G+LGH
Sbjct: 291 GSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGF------------GRLGH 338

Query: 394 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G+  +   P  V     V  LQV+CG  HT AL
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLAL 371


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 81  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 35  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 94  PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G +    + + G VY++G     ++      +   P  ++ L    
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+     S +    P +    D+I   
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN----KSNQSYPTPVTVEK-DRI--- 315

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 316 IEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 85  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 142

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 143 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 202

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 203 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 243

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 279



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 19/270 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G          + ++
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLG---------NNVNQ 221

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
            TP  +  L  V V     G+ H+  + + G +Y +G     ++     N+   P+  ++
Sbjct: 222 LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPTHIMV 281

Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            K    E   C   HT    T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PTHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T D E++++G N +  LG G   + + P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 182 RVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRV------AALHSVCV 235

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG +          + GQLG GN  + + PT +   
Sbjct: 236 NQIV--CGYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPTHIMVE 282

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 283 KERVVEIAACHSAHTSA 299



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L         TP+ ++ L G K+K  + G 
Sbjct: 33  EALYVTEDDEVFVFGLNYSNCLGTGDNQSTL---------TPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 196

Query: 364 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
            + G++  WG+ G+            GQLG GN+V+ + P  V    +V   Q+ CG+ H
Sbjct: 197 LDTGEVYGWGYNGN------------GQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAH 244

Query: 423 TGALLE 428
           T AL +
Sbjct: 245 TLALTD 250



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + V+P  T + C   +F
Sbjct: 317 -SVVLPHLTHLSCTDDVF 333


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 161/394 (40%), Gaps = 45/394 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+      P+        ++ A+A G  H++ LT  G V A G N  GQ
Sbjct: 59  WGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWGRNTEGQ 118

Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG +     S EP+ +S   G++  +V ++ G  HS A+T  G L  WG N  GQLG G 
Sbjct: 119 LG-NGTTTSSGEPVAVSLPSGIR--IVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGS 175

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +   P+  ++   + +    A       +  TG   +L+WGA   G+LG G   +++ 
Sbjct: 176 VTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQLGDG---TVVD 232

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
             R      P  +    G+ V   A G  HS  +  +  V  +G  +  ++    G+   
Sbjct: 233 RSR------PVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQL----GDGTT 282

Query: 280 RPSLIS---KLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             SL+     LP   E   +  G  H+  LTS G    WG N  G LG GS      P  
Sbjct: 283 TGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVA 342

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V  P            I + S    H  AI +EG  L WG             +S G LG
Sbjct: 343 VSLPGGTR-------LISIASRDSDHNVAITTEGAALAWGL------------NSQGHLG 383

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            G   D   P  V+         ++ G +H+ AL
Sbjct: 384 DGTTTDSATPVAVSLPAGAALTSIAVGDDHSLAL 417



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 122/301 (40%), Gaps = 38/301 (12%)

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  +SA  +   +  WG N  GQLG G       PI   V   +G      A G   SVA
Sbjct: 44  HQPASAAVMSDAILAWGGNDGGQLGDGTTTDSSEPI--AVRLPTGTTVAAVAAGDRHSVA 101

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G VL+WG    G+LG+G          +TS   P  +    G+++   A G  HS 
Sbjct: 102 LTSAGTVLAWGRNTEGQLGNGT---------TTSSGEPVAVSLPSGIRIVAVAVGADHSL 152

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGE 308
            +   G +  +G     ++       +  P  + +LP +  V     G  H  VLT+ G 
Sbjct: 153 ALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAV-RLPPNTTVAAIAAGRDHNLVLTATGP 211

Query: 309 --LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SE 365
             L  WG+N  G LG G++     P  V  P           ++  ++ G  H+ A+ S+
Sbjct: 212 AALLAWGANREGQLGDGTVVDRSRPVPVNLPTG--------LTVTAIAGGRDHSLALTSD 263

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             +L WG G SH           GQLG G     + P  V      +A  ++ G  H+ A
Sbjct: 264 DTVLAWG-GNSH-----------GQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLA 311

Query: 426 L 426
           L
Sbjct: 312 L 312


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 30/325 (9%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G +    + + G VY++G     ++      +   P  ++ L    
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTS 349
            + V CG  HT VLT  G++Y WG+N  G LG G+     S +    P +    D+I   
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN----KSNQSYPTPVTVEK-DRI--- 286

Query: 350 IVLVSCGWKHTAAISE--GKILTWG 372
           I + +C   HT+A     G +  WG
Sbjct: 287 IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 173

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 174 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 214

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 215 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 250



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 144/328 (43%), Gaps = 76/328 (23%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 61  LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 119

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 120 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 177

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G          + ++
Sbjct: 178 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN---------NVNQ 228

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 229 LTP----------VRVAA---LHSVCVNQ------------------------------- 244

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQI 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 245 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVE-- 295

Query: 347 CTSIVLVSCGWKHTAAISE--GKILTWG 372
                + +C   HT+A     G +  WG
Sbjct: 296 -----IAACHSAHTSAAKTQGGHVYMWG 318



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 106 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 165

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 166 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 224

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 225 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 282

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 283 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 318



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 34/317 (10%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  IP K+E
Sbjct: 20  LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 76

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 77  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 133

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 134 IKQVVEV-----ACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 188

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICT 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV      + +  +C 
Sbjct: 189 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRV------AALHSVCV 242

Query: 349 SIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 408
           + ++  CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   
Sbjct: 243 NQIV--CGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVE 289

Query: 409 ENVKALQVSCGFNHTGA 425
           +       +C   HT A
Sbjct: 290 KERVVEIAACHSAHTSA 306



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 40  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------IPKKLEALCGKKIKSLSYGS 90

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 91  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 150

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI 363
            + GE++ WG N  G +G GS     +P +V               +V ++CG   + A+
Sbjct: 151 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH-------IKRVVGIACGQTSSMAV 203

Query: 364 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 422
              G++  WG+ G+            GQLG GN+V+ + P  V    +V   Q+ CG+ H
Sbjct: 204 LDNGEVYGWGYNGN------------GQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAH 251

Query: 423 TGALLE 428
           T AL +
Sbjct: 252 TLALTD 257



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 212 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 271

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 272 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 323

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T + C   +F
Sbjct: 324 -SVILPHLTHLSCTDDVF 340


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           +GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +   L+   V   A G +    + + G VY++G     ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
             P  V         D+I   I + +C   HT+A     G +  WG
Sbjct: 298 SYPTPVT-----VEKDRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|301786789|ref|XP_002928812.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Ailuropoda melanoleuca]
          Length = 468

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 179/413 (43%), Gaps = 58/413 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +G   YG+LGLG  E  + P   + F K   ++ +  GG H+  +T+ G ++  GLN  G
Sbjct: 25  FGANSYGQLGLGHKEDVFLPQQLNDFCKPECIRRITGGGGHSAVVTDDGGLFVCGLNKDG 84

Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+  +E++ Y     R S L   + Q++ G+  +  +T  G++   G NS GQLG+  
Sbjct: 85  QLGLGHTEDVLY-FTACR-SLLDCPIQQVACGWDFTIILTESGQVLSCGSNSFGQLGVPH 142

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQESS 216
              + + +P  +E LS      AA G   ++A T  G V  WG G   SG RL  GQ  +
Sbjct: 143 GPRRCM-VPQAIELLSEKVVCIAA-GLRHALAATASGIVFQWGTGLASSGRRLCPGQ--T 198

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +  FL +     P  +  LE  K     AG  HSA + + G +Y++G             
Sbjct: 199 LPPFLTAKE---PSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSN----------K 245

Query: 277 HARRPSLISKLPYSEEVVC-------------GGYHTCVLTSGGELYTWGSNENGCLG-- 321
           H +  SL + LP  +++               G  H    T  G+++TWG  + G LG  
Sbjct: 246 HGQLASLAAFLPMPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGRK 305

Query: 322 IGSIDVL----HSPER-VQGPFSESPVDQIC-TSIVLVSCGWKHTAAISEGKILTWGWGG 375
           + S +        P R   GP    P    C T    VSCG +H  A+  G   +WGW  
Sbjct: 306 LESHEDWKLQNQDPSRPCSGPQKSMPSSLHCLTGAAEVSCGSEHNLAVIGGTCYSWGW-- 363

Query: 376 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
                     +  G  G G++ D   P  V    +   L V CG  H+ AL +
Sbjct: 364 ----------NEHGMCGDGSEADIWAPKPVQALRSSLGLLVGCGAGHSLALCQ 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 163/369 (44%), Gaps = 51/369 (13%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LGLG  E       C +     ++ +ACG   T+ LTE+G V + G N FGQLG+   
Sbjct: 84  GQLGLGHTEDVLYFTACRSLLDCPIQQVACGWDFTIILTESGQVLSCGSNSFGQLGVPHG 143

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG---KNSNGQLGLGKKAAKVI 165
               + P  I  L ++VV I+ G  H+ A T  G ++ WG    +S  +L  G+     +
Sbjct: 144 PRRCMVPQAIELLSEKVVCIAAGLRHALAATASGIVFQWGTGLASSGRRLCPGQTLPPFL 203

Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P++V  L          G + S ++T  G++  WG+       HGQ +S+  FL  
Sbjct: 204 TAKEPSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSN-----KHGQLASLAAFLP- 257

Query: 224 TSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGD-------RAVD-----K 269
                P+ I+    +  KV    +G+ H     E G+V+ +G        R ++     K
Sbjct: 258 ----MPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLESHEDWK 313

Query: 270 MLFQE------GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           +  Q+      G     PS +  L  + EV CG  H   +  GG  Y+WG NE+G  G G
Sbjct: 314 LQNQDPSRPCSGPQKSMPSSLHCLTGAAEVSCGSEHNLAVI-GGTCYSWGWNEHGMCGDG 372

Query: 324 SIDVLHSPERVQGPFSESPVDQICTSI-VLVSCGWKHTAAISEGKILT-WGW----GGSH 377
           S   + +P+         PV  + +S+ +LV CG  H+ A+ +   L   GW     GS 
Sbjct: 373 SEADIWAPK---------PVQALRSSLGLLVGCGAGHSLALCQLPALPELGWCPKVTGSS 423

Query: 378 GTFSEDGHS 386
              +ED  S
Sbjct: 424 PDATEDAES 432



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 118/296 (39%), Gaps = 81/296 (27%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIP----TKVECLSGI------------------ 177
           +D E   +G NS GQLGLG K    +P       K EC+  I                  
Sbjct: 18  IDREGQKFGANSYGQLGLGHKEDVFLPQQLNDFCKPECIRRITGGGGHSAVVTDDGGLFV 77

Query: 178 -------------------FT----------KQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                              FT          +Q A G++ ++ +T  G+VLS G+   G+
Sbjct: 78  CGLNKDGQLGLGHTEDVLYFTACRSLLDCPIQQVACGWDFTIILTESGQVLSCGSNSFGQ 137

Query: 209 LG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-- 264
           LG  HG    ++          P+ I EL   KV   AAG  H+     +G V+ +G   
Sbjct: 138 LGVPHGPRRCMV----------PQAI-ELLSEKVVCIAAGLRHALAATASGIVFQWGTGL 186

Query: 265 -----RAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNEN 317
                R            A+ PS ++ L  S+   V+ G  H+  LT  GELY WGSN++
Sbjct: 187 ASSGRRLCPGQTLPPFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKH 246

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
           G L   +   L  P++++    ++        +  V  GW H  A +E GK+ TWG
Sbjct: 247 GQLASLAA-FLPMPQKIEAHCFQN------EKVTSVWSGWTHLVAQTETGKVFTWG 295


>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
          Length = 835

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 174/377 (46%), Gaps = 60/377 (15%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQI 128
            L  L+CG  H   +    C+Y  G++  G LG+   +  S  P  +     LK +V+ +
Sbjct: 359 DLHHLSCGFEHAA-VVRNSCLYTMGVSSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSV 417

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  H+ A+T D  +Y WG N+ GQLGLG    +  P P  +  L+     Q + G   
Sbjct: 418 SCGRKHTLALT-DYGVYAWGSNTYGQLGLGPLIQES-PYPQIITNLAFKKMVQVSAGQYH 475

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           ++A++  G+V +WG G  G+LGHG   +I         Y P+L+      KV   AAG  
Sbjct: 476 TIALSSSGEVYTWGWGIHGQLGHGDCDNI---------YYPKLLPFQH--KVVQVAAGHA 524

Query: 249 HSACIDENGRVYIFGDRAVDKMLF--QEGNHARRPSLISKLP--YS--EEVVCGGYHTCV 302
           HS  +   G+++ FG     ++ +   + N + RP LI  +P  Y+  E++  G +H   
Sbjct: 525 HSLILTREGKLFGFGSNVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIA 584

Query: 303 LTSGGELYTWGSNENGCLGIGSIDV-------LHSPERVQGPF------SESPVDQICTS 349
           + +  E+YTWG++      + S ++       L  P+  +         ++ P++Q+   
Sbjct: 585 VRADQEVYTWGASPQEVRILQSKNLQKQNGLSLKGPDSWKASVHIYSGGNKKPIEQVVV- 643

Query: 350 IVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 409
                 G++H+  +  GK+L   WG      ++D   S  +L   +++ +       F  
Sbjct: 644 ------GYRHSVILHNGKLL---WGK-----NKDDELSPPKLNDKDNISF-------FAH 682

Query: 410 NVKALQVSCGFNHTGAL 426
             K + VSCG ++T A+
Sbjct: 683 --KFIHVSCGLDYTMAI 697



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 163/351 (46%), Gaps = 57/351 (16%)

Query: 49  GRLGLGSLESRWRP--VVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G LGLG L ++  P  +V + F+ K  + +++CG  HTL LT+ G VYA G N +GQLG+
Sbjct: 387 GCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDYG-VYAWGSNTYGQLGL 445

Query: 106 SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK----K 160
              I  S  P  I+ L  K++VQ+S G +H+ A++  GE+Y WG   +GQLG G      
Sbjct: 446 GPLIQESPYPQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIY 505

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             K++P   KV         Q A G   S+ +T  GK+  +G+   G+L + Q       
Sbjct: 506 YPKLLPFQHKVV--------QVAAGHAHSLILTREGKLFGFGSNVFGQLEYCQ------- 550

Query: 221 LRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           L S     P LI  +  +   I   A G+ H+  +  +  VY +G    +  + Q  N  
Sbjct: 551 LDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYTWGASPQEVRILQSKNLQ 610

Query: 279 RRPSLISKLPYS----------------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++  L  K P S                E+VV G  H+ +L +G  L  WG N++  L  
Sbjct: 611 KQNGLSLKGPDSWKASVHIYSGGNKKPIEQVVVGYRHSVILHNGKLL--WGKNKDDEL-- 666

Query: 323 GSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWG 372
                  SP ++     +  +       + VSCG  +T AI   GK+L WG
Sbjct: 667 -------SPPKLN---DKDNISFFAHKFIHVSCGLDYTMAIDHAGKLLAWG 707



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 19/120 (15%)

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
           G  +     I  +D +  PE    P  E+ +D++   +  +SCG++H A +    + T G
Sbjct: 327 GKTDKDEYNIHLLDFMDPPE---PPIEETLIDKM-PDLHHLSCGFEHAAVVRNSCLYTMG 382

Query: 373 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN---FGENVKALQVSCGFNHTGALLEY 429
                        SS G LG G  +    P  +    F   VK L VSCG  HT AL +Y
Sbjct: 383 V------------SSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDY 430


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 28/317 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+ D+G+LGLG  ++  +P    + +    K +ACG +HTL  T  G VY  G    GQ
Sbjct: 59  FGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQ 118

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ E+     EP  +     + + +S GY+H++ +T DG LY +G+   G+LGL     
Sbjct: 119 LGLGEDTTECTEPTLLD-FDSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDL 177

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                P KV   +GI  K   +  G   + A+   G V ++G G SG+LGHG  +S+L  
Sbjct: 178 DSSDTPQKV---TGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHG--NSLL-- 230

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR- 279
                  TP  ++       K A+ G   +A I   G +Y FGD    K+   + +    
Sbjct: 231 ----ESPTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQ 286

Query: 280 -RPSLISKLPYSEE--VVCGGYHTCVLTS----GGELYTWGSNENGCL----GIGSIDV- 327
            RP  +++    +   V CGG H  V+ S     GE+ +  S+E+  +    G  S+++ 
Sbjct: 287 FRPFKVARFNKFQVQWVACGGCHMMVIASPRQQNGEISSESSDEDPLMESISGQKSLNLS 346

Query: 328 -LHSPERVQGPFSESPV 343
            + S  + +G  S+SP+
Sbjct: 347 KISSENKEEGEDSQSPL 363



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 126/256 (49%), Gaps = 20/256 (7%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYH 133
           A+ACG  HT  +TE G +Y  G ND+GQLG+      S +P  +  LK E  + ++ G  
Sbjct: 39  AVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTAS-KPSCVKSLKHEKAKLVACGRS 97

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H+   T DG++Y+WG  S GQLGLG+   +    PT ++  S   +   + G+  +  VT
Sbjct: 98  HTLIATGDGKVYVWGGGSEGQLGLGEDTTECT-EPTLLDFDSKAIS--VSCGYYHTAVVT 154

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G + ++G    G+LG       L      S  TP+ +  ++  KVK    G  H+  I
Sbjct: 155 EDGNLYTFGETEYGKLG-------LNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAI 206

Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
            E+G VY FG+ A  ++    GN    +  P  + +   ++     CG   T V+T  G 
Sbjct: 207 AESGAVYTFGNGASGQL--GHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGH 264

Query: 309 LYTWGSNENGCLGIGS 324
           LYT+G   +G LG+G 
Sbjct: 265 LYTFGDGRHGKLGLGD 280



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 36/300 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG ++      FG+   +ENI      +R       +  ++ G  H++ +T +G LY
Sbjct: 8   VPETGAIFT-----FGKSKFAENISSKFW-IR----NDRICAVACGDEHTALVTENGRLY 57

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +G N  GQLGLG    K    P+ V+ L     K  A G   ++  TG GKV  WG G 
Sbjct: 58  TFGSNDWGQLGLGH--TKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGS 115

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G++         T+E T   + + +   + + + G+ H+A + E+G +Y FG+ 
Sbjct: 116 EGQLGLGED---------TTECTEPTLLDFDSKAISV-SCGYYHTAVVTEDGNLYTFGET 165

Query: 266 AVDKMLFQEG--NHARRPSLISKLPYSEE-VVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
              K+       + +  P  ++ +    + VVCGG HT  +   G +YT+G+  +G LG 
Sbjct: 166 EYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGH 225

Query: 323 G-SIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTF 380
           G S+    +P RV     E   D  C      SCG   TA I+ +G + T+G  G HG  
Sbjct: 226 GNSLLESPTPHRV-----ERFRDADCKH---ASCGENFTAVITGKGHLYTFG-DGRHGKL 276



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 35/249 (14%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G E +  VT  G++ ++G+   G+LG       LG  ++ S+  P  +K L+  K K+
Sbjct: 41  ACGDEHTALVTENGRLYTFGSNDWGQLG-------LGHTKTASK--PSCVKSLKHEKAKL 91

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
            A G  H+     +G+VY++G  +  ++ L ++      P+L+     +  V CG YHT 
Sbjct: 92  VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAISVSCGYYHTA 151

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIVLVSCGWKH 359
           V+T  G LYT+G  E G LG+ + D+  S  P++V G         I   +  V CG  H
Sbjct: 152 VVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTG---------IKEKVKFVVCGGGH 202

Query: 360 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVS 417
           T AI+E G + T+G G S            GQLGHGN  ++   P  V    +      S
Sbjct: 203 TTAIAESGAVYTFGNGAS------------GQLGHGNSLLESPTPHRVERFRDADCKHAS 250

Query: 418 CGFNHTGAL 426
           CG N T  +
Sbjct: 251 CGENFTAVI 259



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 10/213 (4%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG G  G+LGLG   +         F+  ++ +++CG  HT  +TE G +Y  G  ++G
Sbjct: 110 VWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCGYYHTAVVTEDGNLYTFGETEYG 168

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG++  ++  S  P +++G+K++V  +  G  H++AI   G +Y +G  ++GQLG G  
Sbjct: 169 KLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNS 228

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P P +VE       K A+ G   +  +TG G + ++G G  G+LG G ES     
Sbjct: 229 LLES-PTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDES----- 282

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              T+++ P  +      +V+  A G  H   I
Sbjct: 283 --FTNQFRPFKVARFNKFQVQWVACGGCHMMVI 313



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 68/138 (49%), Gaps = 24/138 (17%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVL 352
           V CG  HT ++T  G LYT+GSN+ G LG+G       P  V+    E           L
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHE--------KAKL 91

Query: 353 VSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGEN 410
           V+CG  HT  A  +GK+  WG G            S GQLG G D  +   PT+++F  +
Sbjct: 92  VACGRSHTLIATGDGKVYVWGGG------------SEGQLGLGEDTTECTEPTLLDF--D 137

Query: 411 VKALQVSCGFNHTGALLE 428
            KA+ VSCG+ HT  + E
Sbjct: 138 SKAISVSCGYYHTAVVTE 155


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           +GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +   L+   V   A G +    + + G VY++G     ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN---- 293

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            S +    P +    D+I   I + +C   HT+A     G +  WG
Sbjct: 294 KSNQSYPTPVTVEK-DRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P +IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           +GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +   L+   V   A G +    + + G VY++G     ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN---- 293

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            S +    P +    D+I   I + +C   HT+A     G +  WG
Sbjct: 294 KSNQSYPTPVTMEK-DRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 45/297 (15%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG      +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKI 368
           G N NG LG+GS     +P RV   QG             +  V+CG+ HT  ++ EG++
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQG-----------IRVQRVACGYAHTLVLTDEGQV 278

Query: 369 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 425
             WG             +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 279 YAWG------------ANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSA 323



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 167/376 (44%), Gaps = 39/376 (10%)

Query: 43  WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WGN  +  L +   G+L+   +P +    E   ++ ++ G  HTL+L+  G +Y  G N+
Sbjct: 4   WGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNE 63

Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
            GQLG   N      P+ +   K   +  I+ G  HS A+   G+ + WG +S GQLG  
Sbjct: 64  VGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSN 123

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG  A      P  ++ L+     Q A G   +V +T  G + +WGA   G+ G G    
Sbjct: 124 LGSHAQDK---PKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGN--- 177

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                RS  E TP+ +  + G+ + + A G  H+  + ++G V+ +G  +  ++  Q+  
Sbjct: 178 -----RSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRE 232

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P+ +  L   +   + CG   T  LT  G ++T G+ E G  G G+      P +V
Sbjct: 233 SRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKV 292

Query: 335 QGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 394
                   ++ + +++  V+CG +H       +IL  G+G              GQLG  
Sbjct: 293 --------MELMGSTVTQVACGRRHMLCRVGERILACGYGAR------------GQLGCP 332

Query: 395 NDVDYIHPTIVNFGEN 410
           +    + PT V F  N
Sbjct: 333 HMAFALVPTPVTFTPN 348



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 34/289 (11%)

Query: 144 LYMWGKNSNGQLGL---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           ++ WG  ++ +L +   G     + P  +K +  S I  +Q + G   ++ ++  G + +
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHI--QQISAGEFHTLYLSNNGHLYT 58

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            G+   G+LG    S+           +P L+   +G  +   A G  HS  +DE G+ +
Sbjct: 59  CGSNEVGQLGRQTNSA--------DGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPF 110

Query: 261 IFGDRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            +G  ++ ++    G+HA+ +P +I  L      +V CG YHT VLT+ G+LY WG+N  
Sbjct: 111 SWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSY 170

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSH 377
           G  G+G+        +   P + S +  +   I L++CG  HT A+S+   + +GWG + 
Sbjct: 171 GQCGLGN-----RSNKETTPQALSSI--LGIPIALIACGSNHTFALSQSGAV-FGWGKN- 221

Query: 378 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
                    S GQLG  +     +PT +    NVK   +SCG + T  L
Sbjct: 222 ---------SHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFL 261


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 35/270 (12%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G +H++ ++  G++Y WG N  GQLG  +  +++  +P+++  L  +F   A+ G   ++
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLG--RDYSRLWSLPSELH-LPNVFVVSASCGGMHTL 57

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            ++  GKV S+G G +GRLGHG         R+ S   P+ I  LE  ++   AAG+ HS
Sbjct: 58  LLSKEGKVFSFGDGANGRLGHGN-------CRNYS--LPQPIASLESKRITFIAAGWTHS 108

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCGGY-HTCVLTSG 306
             ID++G+++ +G     ++         RP  + +L        +  G Y H+ V    
Sbjct: 109 MAIDDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCEN 168

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-E 365
           G ++TWG  E+G LG+GS +    P  V+       +      IV VSCG  HTAA++ +
Sbjct: 169 GTVWTWGLGEHGQLGVGSTESHLEPVLVK------SMADANLHIVEVSCGGAHTAAVTND 222

Query: 366 GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 395
           G +LTWG G              GQLGHGN
Sbjct: 223 GTLLTWGRG------------DWGQLGHGN 240



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 18/252 (7%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           G  H   ++  G VY  G N FGQLG   +  +SL P  +      VV  S G  H+  +
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSL-PSELHLPNVFVVSASCGGMHTLLL 59

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           + +G+++ +G  +NG+LG G      +P P  +  L        A G+  S+A+   GK+
Sbjct: 60  SKEGKVFSFGDGANGRLGHGNCRNYSLPQP--IASLESKRITFIAAGWTHSMAIDDDGKL 117

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDEN 256
            +WG G +GRLGHG    +         + PR +  L  +++K  +A+  + HSA   EN
Sbjct: 118 FTWGCGNAGRLGHGNVLDV---------WRPRFVDRLYRIRMKAMMASGSYDHSAVCCEN 168

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTW 312
           G V+ +G     ++          P L+  +  +     EV CGG HT  +T+ G L TW
Sbjct: 169 GTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTW 228

Query: 313 GSNENGCLGIGS 324
           G  + G LG G+
Sbjct: 229 GRGDWGQLGHGN 240



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 4/173 (2%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+G  GRLG G+  +   P   ++ E   +  +A G  H++ + + G ++  G  + G+L
Sbjct: 69  GDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRL 128

Query: 104 GISENIGYSLEPL---RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G   N+     P    R+  ++ + +  S  Y HS+    +G ++ WG   +GQLG+G  
Sbjct: 129 G-HGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGST 187

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
            + + P+  K    + +   + + G   + AVT  G +L+WG G  G+LGHG 
Sbjct: 188 ESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 21/194 (10%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHS 135
           +CGG HTL L++ G V++ G    G+LG      YSL P  I+ L+ K +  I+ G+ HS
Sbjct: 50  SCGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYSL-PQPIASLESKRITFIAAGWTHS 108

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIFTK--QAALGFEQSVA 191
            AI  DG+L+ WG  + G+LG G     V+ +  P  V+ L  I  K   A+  ++ S  
Sbjct: 109 MAIDDDGKLFTWGCGNAGRLGHG----NVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAV 164

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLH 249
               G V +WG G  G+LG G   S L          P L+K +    + I   + G  H
Sbjct: 165 CCENGTVWTWGLGEHGQLGVGSTESHL---------EPVLVKSMADANLHIVEVSCGGAH 215

Query: 250 SACIDENGRVYIFG 263
           +A +  +G +  +G
Sbjct: 216 TAAVTNDGTLLTWG 229



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 108/247 (43%), Gaps = 33/247 (13%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   +  V+G G V +WGA   G+LG  ++ S L  L S           L  V V  A+
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLG--RDYSRLWSLPSE--------LHLPNVFVVSAS 50

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
            G +H+  + + G+V+ FGD A  ++      +   P  I+ L       +  G  H+  
Sbjct: 51  CGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMA 110

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAA 362
           +   G+L+TWG    G LG G++  +  P  V   +      +I    ++ S  + H+A 
Sbjct: 111 IDDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLY------RIRMKAMMASGSYDHSAV 164

Query: 363 ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVSCG 419
             E G + TWG G              GQLG G+   ++ P +V      N+  ++VSCG
Sbjct: 165 CCENGTVWTWGLG------------EHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCG 212

Query: 420 FNHTGAL 426
             HT A+
Sbjct: 213 GAHTAAV 219



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 30/190 (15%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTC 301
           G  H+A +   G VY +G     ++     +++R  SL S+L      V    CGG HT 
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQL---GRDYSRLWSLPSELHLPNVFVVSASCGGMHTL 57

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTA 361
           +L+  G+++++G   NG LG G+      P+ +    S+         I  ++ GW H+ 
Sbjct: 58  LLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKR--------ITFIAAGWTHSM 109

Query: 362 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVSC 418
           AI + GK+ TWG G            + G+LGHGN +D   P  V+  +   +KA+  S 
Sbjct: 110 AIDDDGKLFTWGCG------------NAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASG 157

Query: 419 GFNHTGALLE 428
            ++H+    E
Sbjct: 158 SYDHSAVCCE 167


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG---------NSG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 150/345 (43%), Gaps = 37/345 (10%)

Query: 46  GDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYA 94
           GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++ 
Sbjct: 10  GDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFV 69

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSN 152
            G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+ 
Sbjct: 70  LGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G G
Sbjct: 129 SQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187

Query: 213 QESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                     + ++  PR +   L+   V   A G +    + ++G VY++G     ++ 
Sbjct: 188 S---------TINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 238

Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+     
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN----K 294

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
           S +    P +    D+I   I + +C   HT+A     G +  WG
Sbjct: 295 SNQSYPTPVTVEK-DRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A +  G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDSGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G    +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G    +AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P  + K    E   C   HT    T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 37/346 (10%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           +GD G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   SGDSGKPVQATLSSLKKLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +   L+   V   A G +    + + G VY++G     ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN---- 293

Query: 329 HSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISE--GKILTWG 372
            S +    P +    D+I   I + +C   HT+A     G +  WG
Sbjct: 294 KSNQSYPTPVTVEK-DRI---IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197

Query: 334 VQGPFSESPVDQICTSIVLVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 392
           V G      V       V ++CG     A+ + G++  WG+ G+            GQLG
Sbjct: 198 VTGCLQNKVV-------VTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLG 238

Query: 393 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 428
            GN  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG+  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCADDVF 357


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 160/365 (43%), Gaps = 37/365 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG++G G+   R  PV  S      + A+A G  H+L L   G V+A G N+ GQ
Sbjct: 379 WGSNTYGQIGDGTPLRRLTPVQLSTLT--GIIAVAAGANHSLALAANGTVFAWGRNNHGQ 436

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       SL P ++  L   +V ++ G  HS A+  DG +Y WG+N  GQLG      
Sbjct: 437 LGDGSTTNRSL-PTQVPNLTG-IVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTD 494

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+   V  L  +    A  G   S+A+   G   +WG+   G+L      S      
Sbjct: 495 RLSPV--AVHYLEKVVAISA--GDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGS------ 544

Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               ++P LI ++ G+   I  AAG  H+  ++ NG  +  GD    ++          P
Sbjct: 545 --GRFSP-LISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAP 601

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             I+ L  +  +  GG  +  LT+ G + TWG N +G LG    D   +      P   +
Sbjct: 602 VPITTLTNAARLAAGGNTSAALTTNGTVSTWGLNSSGQLG----DNTTASRTTIAPVLRT 657

Query: 342 --PVDQICTSIVLVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 398
             P  ++ + +  +  G  H TA  ++G + +WG   S            GQ+G G  V+
Sbjct: 658 VYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDS------------GQIGDGTLVN 705

Query: 399 YIHPT 403
              PT
Sbjct: 706 RPLPT 710



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 154/333 (46%), Gaps = 31/333 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG LG  +  +R  P   +      L+ +A G  HT+++   G V+A G N +GQ
Sbjct: 329 WGLNTYGGLGNNTKVNRSTP--GTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQ 386

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G    +   L P+++S L   ++ ++ G +HS A+  +G ++ WG+N++GQLG G    
Sbjct: 387 IGDGTPL-RRLTPVQLSTLTG-IIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTN 444

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   +PT+V  L+GI    A  G   S+A+   G V +WG    G+L  G E+       
Sbjct: 445 R--SLPTQVPNLTGIVALAA--GATHSLALRFDGTVYAWGRNHLGQL--GDET------- 491

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   +P  +  LE  KV   +AG  HS  I +NG  + +G     ++        R   
Sbjct: 492 CTDRLSPVAVHYLE--KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGRFSP 549

Query: 283 LISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           LIS++P   +   +  G  HT +L + G  +  G N  G LG G+     +P        
Sbjct: 550 LISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPV------- 602

Query: 340 ESPVDQICTSIVLVSCGWKHTAAISEGKILTWG 372
             P+  +  +  L + G    A  + G + TWG
Sbjct: 603 --PITTLTNAARLAAGGNTSAALTTNGTVSTWG 633



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 150/345 (43%), Gaps = 33/345 (9%)

Query: 37  RRFAALWGNGD--YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           R+   +W +G   +G LG G+      PV  S      + ++A G  H+L L   G V+A
Sbjct: 12  RQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLT--GVISVAAGYYHSLALKSDGTVWA 69

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            GLN +G LG +     + +P+++  L   V+ I+  Y+ S A+  DG ++ WG N N  
Sbjct: 70  WGLNTYGNLGDNTTTTRT-KPVQVLNLTG-VIAIAADYYQSFALKSDGTVWSWGYNGNSA 127

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTK-----QAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           LG    A + +P   + +   GI +        A G   ++A+   G V SWG   SG+L
Sbjct: 128 LGNASPATQKLPAQVQ-QSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWGLNSSGQL 186

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G+G          +T     + +   + V +   +AG  HS  +  NG V  +G     +
Sbjct: 187 GNGT--------LATQSAAVQAVNLTDAVAI---SAGAAHSLALRANGAVVSWGANTYGQ 235

Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +       +  P  +S L   + +  GG H+  L S G +  WG N  G +G G+   + 
Sbjct: 236 LGNGTTTTSASPVGVSGLNNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATANVL 295

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWG 374
           SP  V             + +  VS G  H+ AI     + WGWG
Sbjct: 296 SPIAV----------STLSGVTAVSAGVSHSHAIGSSNGVIWGWG 330



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 50/357 (14%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           G  HTL + + G V+A+G N  G+LG +     SL P+++S L   V+ ++ GY+HS A+
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELG-NGTATDSLSPVQVSNLTG-VISVAAGYYHSLAL 61

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
             DG ++ WG N+ G LG      +  P+  +V  L+G+    A   + QS A+   G V
Sbjct: 62  KSDGTVWAWGLNTYGNLGDNTTTTRTKPV--QVLNLTGVIAIAA--DYYQSFALKSDGTV 117

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG------VKVKIAAAGFLHSAC 252
            SWG  G+  LG+   +         ++  P  +++  G        V   AAG  H+  
Sbjct: 118 WSWGYNGNSALGNASPA---------TQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLA 168

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           +  NG V+ +G  +  ++    G  A + + +  +  ++ V    G  H+  L + G + 
Sbjct: 169 LKSNGTVWSWGLNSSGQL--GNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVV 226

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAI-SEGKIL 369
           +WG+N  G LG G+     SP  V G            +I  ++ G  H+ A+ S+G + 
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSG----------LNNIKSLAAGGNHSLALKSDGTVT 276

Query: 370 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
            W            G+++ GQ+G+G   + + P  V+    V A  VS G +H+ A+
Sbjct: 277 AW------------GYNAYGQVGNGATANVLSPIAVSTLSGVTA--VSAGVSHSHAI 319



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 154/355 (43%), Gaps = 45/355 (12%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
           A+A G  HTL L   G V++ GLN  GQLG   N   + +   +  +   + V IS G  
Sbjct: 158 AIAAGTHHTLALKSNGTVWSWGLNSSGQLG---NGTLATQSAAVQAVNLTDAVAISAGAA 214

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           HS A+  +G +  WG N+ GQLG G       P+   V  L+ I  K  A G   S+A+ 
Sbjct: 215 HSLALRANGAVVSWGANTYGQLGNGTTTTSASPV--GVSGLNNI--KSLAAGGNHSLALK 270

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G V +WG    G++G+G  +++L         +P  +  L GV     +AG  HS  I
Sbjct: 271 SDGTVTAWGYNAYGQVGNGATANVL---------SPIAVSTLSGVTA--VSAGVSHSHAI 319

Query: 254 -DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
              NG ++ +G      +      +   P  I      + V  G  HT  +   G ++ W
Sbjct: 320 GSSNGVIWGWGLNTYGGLGNNTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAW 379

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTW 371
           GSN  G +G G+      P R   P   S +    T I+ V+ G  H+ A++  G +  W
Sbjct: 380 GSNTYGQIGDGT------PLRRLTPVQLSTL----TGIIAVAAGANHSLALAANGTVFAW 429

Query: 372 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           G          + H   GQLG G+  +   PT V     + AL  + G  H+ AL
Sbjct: 430 G---------RNNH---GQLGDGSTTNRSLPTQVPNLTGIVAL--AAGATHSLAL 470



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 167/397 (42%), Gaps = 59/397 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG LG  +  +R +PV         + A+A     +  L   G V++ G N    
Sbjct: 70  WGLNTYGNLGDNTTTTRTKPV--QVLNLTGVIAIAADYYQSFALKSDGTVWSWGYNGNSA 127

Query: 103 LG------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           LG            + ++ G  L PL       +VV I+ G HH+ A+  +G ++ WG N
Sbjct: 128 LGNASPATQKLPAQVQQSFGGILSPL------TDVVAIAAGTHHTLALKSNGTVWSWGLN 181

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           S+GQLG G  A +       V+ ++       + G   S+A+   G V+SWGA   G+LG
Sbjct: 182 SSGQLGNGTLATQ----SAAVQAVNLTDAVAISAGAAHSLALRANGAVVSWGANTYGQLG 237

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G          +T+  +P  +  L    +K  AAG  HS  +  +G V  +G  A  ++
Sbjct: 238 NG---------TTTTSASPVGVSGLN--NIKSLAAGGNHSLALKSDGTVTAWGYNAYGQV 286

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                 +   P  +S L     V  G  H+  + +S G ++ WG N  G LG  +     
Sbjct: 287 GNGATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGNNTKVNRS 346

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 389
           +P  +           + + +  V+ G +HT  + +G    W WG +  T+        G
Sbjct: 347 TPGTI----------LLTSGLQGVAGGAQHTIYV-KGDGTVWAWGSN--TY--------G 385

Query: 390 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 426
           Q+G G  +  + P  V        + V+ G NH+ AL
Sbjct: 386 QIGDGTPLRRLTP--VQLSTLTGIIAVAAGANHSLAL 420


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  111 bits (277), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 85/278 (30%), Positives = 128/278 (46%), Gaps = 24/278 (8%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRISGLKKEVVQ 127
           K     + CG  HT+ LTE G V+  G+   G LG +  +     P  + ISGL     +
Sbjct: 298 KQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLG-NGRVDDLETPTQIDISGLFFN--E 354

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           I+ G +HS A+  + ++Y WG N+ GQLG+G K  +++P          I  +    G +
Sbjct: 355 IAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQ 414

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S  +T   ++ +WG G   RLGHG             E  P+ I+ L+ V V   A G 
Sbjct: 415 HSACITTNKELYTWGNGDYYRLGHGM---------LLDEMEPKKIEILQDVYVLDVALGT 465

Query: 248 LHSACIDENGRVYIFGDR--AVDKMLFQEGNHARRPSLISKLPYS------EEVVCGGYH 299
           +HS CI   G VY +G    +V  M  Q+      P  +  +  S       +V  G  H
Sbjct: 466 IHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSH 525

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQ 335
           +  L+  G LY WGSN+N  LG+      H+  P++V+
Sbjct: 526 SLSLSENGHLYVWGSNKNSLLGVRLQGQEHTCVPQKVE 563



 Score =  104 bits (260), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 105/381 (27%), Positives = 174/381 (45%), Gaps = 43/381 (11%)

Query: 8   AMTKYYLKQDIKLG-SKLGICKRWISSTLQRR---FAALWGNGDYGRLGLGSLESRWRPV 63
           A  K+++ +  K G +++ IC  +   T + R    A +WGN   GRLG    +      
Sbjct: 186 AFEKFFMMEKSKDGKTEINICYYYQMLTQESRPEYIAIVWGNPANGRLGAPKSKFPNESD 245

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLK 122
             + F  ++   +          + T  V  +  N    L  +E N    ++P+    LK
Sbjct: 246 KQTIFNNNNPSQMDFTSRQMQQPSRTQQVQNSQYN----LNQAEPNNSDFIQPI---ALK 298

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           +E V+I  G+HH+ A+T +G +++WG  S G LG G+     +  PT+++ +SG+F  + 
Sbjct: 299 QEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGR--VDDLETPTQID-ISGLFFNEI 355

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G   S+A+    +V  WG    G+LG G + + L          P+ +   +  K++ 
Sbjct: 356 AAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQL---------LPKQLTFFDRKKIQC 406

Query: 243 A--AAGFLHSACIDENGRVYIFGD----RAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
                G  HSACI  N  +Y +G+    R    ML  E      P  I  L   Y  +V 
Sbjct: 407 QYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDE----MEPKKIEILQDVYVLDVA 462

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQICTSIVL 352
            G  H+  +T+ G +Y WGS+++  LG+ +        P+RV G  S+S  D    S   
Sbjct: 463 LGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRV-GLMSQSFRD---ASFYQ 518

Query: 353 VSCGWKHTAAISE-GKILTWG 372
           V+ G  H+ ++SE G +  WG
Sbjct: 519 VAAGTSHSLSLSENGHLYVWG 539



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 172/417 (41%), Gaps = 88/417 (21%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLNDF 100
           WG  + G+LG+G+ E++  P   + F++  ++   L CG  H+  +T    +Y  G  D+
Sbjct: 374 WGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDY 433

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            +LG    +   +EP +I  L+   V+ ++ G  HS  IT +G +Y WG + +  LG+  
Sbjct: 434 YRLGHGMLLD-EMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPT 492

Query: 160 KAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGSGRLG---HG 212
           +  K   +P +V  +S  F      Q A G   S++++  G +  WG+  +  LG    G
Sbjct: 493 QQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQG 552

Query: 213 QESSILGFLRSTSEYTPR----------LIKELEGV------------------------ 238
           QE + +      SE   +          L KE + +                        
Sbjct: 553 QEHTCVPQKVEQSEDLEKSCIEKALFFNLKKEEQQMMKDEKLVTFEQTTLMKTILQSTMG 612

Query: 239 -----KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-----------PS 282
                K K A  G  ++  ID  G +Y  G     K +  +  H ++           P 
Sbjct: 613 QSHECKYKFATLGTKNTYFIDNTGHLYACGSN--QKGMLCKNPHKKQKFKQFIPQKDPPD 670

Query: 283 LISKLPYSE-EVV-----------CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLH 329
           ++ +  ++  E+V           C   H   +T+ G  Y WGSN+   LG+G   D + 
Sbjct: 671 ILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVF 730

Query: 330 SPERVQGPFSESPVDQICTSIVLVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 385
           +P  ++G   +         I++   G K +A ++ +G++  W +G S   F   GH
Sbjct: 731 TPILLEGAIEQK-------VIIMAITGEKFSALLTDQGEV--WSFGTSE--FGVLGH 776



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 78/358 (21%), Positives = 139/358 (38%), Gaps = 58/358 (16%)

Query: 40   AALWGNGDYGRLGLG-SLESRWRPVVCS-AFEKHSLKALACGGAHTLFLTETGCVYATGL 97
            A  WG+  Y +LGLG   +  + P++   A E+  +     G   +  LT+ G V++ G 
Sbjct: 709  AYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITGEKFSALLTDQGEVWSFGT 768

Query: 98   NDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            ++FG LG   +N    +EP  I+ +   ++ ++       AI    +L+ WG N  GQLG
Sbjct: 769  SEFGVLGHELKNFYVIMEPRMINDIP-SMINLACSNQTMFAIDQKQQLWAWGNNQFGQLG 827

Query: 157  LG-----------------------KKAAKVIPIPTK----------VECLSG-IFTKQA 182
            +                        K   K +  P +             ++G  F  Q 
Sbjct: 828  ISLQRDEEEINLQTNKQVSSEFLEWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQV 887

Query: 183  ALGFEQSVAVTGGGKVLSWG----AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            + G   +  +T   ++L+ G    AG   +     E       +    ++  L  E    
Sbjct: 888  SCGLYHTCIITTNQELLTCGLAKYAGHQSQEPEDPEQQQAQQAQFIDAFSSTL--EHSSK 945

Query: 239  KVKIAAAGFLHSACIDENGRVYIFGDRAVDK-------MLFQEGNHARRPSLISKLPYSE 291
            K K+ A    H+  +  +  +   G    ++        LF++G   + P  +  + +  
Sbjct: 946  KFKLVACHEYHTVAVTVSSDLVFLGPEGKERGLHEKFANLFRDGK--QMPVELQNIKF-- 1001

Query: 292  EVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGPFSESPVDQIC 347
             V CG  H  +L   G+ YTWG+   G LG  I  I +L   E++  P+      ++C
Sbjct: 1002 -VACGPNHALILNDQGQTYTWGATMGGRLGLHINEIGLLDGQEKLIIPYPTKIECEVC 1058



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 166/473 (35%), Gaps = 120/473 (25%)

Query: 17  DIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV------VCSAFEK 70
           D+ LG+   +C           F   WG+     LG+ + + + + +      +  +F  
Sbjct: 460 DVALGTIHSLC------ITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRD 513

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI----------------SENIGYS-L 113
            S   +A G +H+L L+E G +Y  G N    LG+                SE++  S +
Sbjct: 514 ASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQEHTCVPQKVEQSEDLEKSCI 573

Query: 114 EPLRISGLKKE---------------------VVQISTGYHHSSA-------------IT 139
           E      LKKE                     ++Q + G  H                I 
Sbjct: 574 EKALFFNLKKEEQQMMKDEKLVTFEQTTLMKTILQSTMGQSHECKYKFATLGTKNTYFID 633

Query: 140 VDGELYMWGKNSNGQLGLG----KKAAKVIP-------------IPTKVECLSGIFTKQA 182
             G LY  G N  G L       +K  + IP              P ++        +  
Sbjct: 634 NTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNTIIRYI 693

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVK 241
           +  +   +AVT  G    WG+    +LG       LGF +S   +TP L++  +E   + 
Sbjct: 694 SCQYNHCIAVTAKGNAYCWGSNQYNQLG-------LGF-QSDHVFTPILLEGAIEQKVII 745

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYH 299
           +A  G   SA + + G V+ FG      +  +  N      P +I+ +P    + C    
Sbjct: 746 MAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSMINLACSNQT 805

Query: 300 TCVLTSGGELYTWGSNENGCLGI-------------------------GSIDVLHSPERV 334
              +    +L+ WG+N+ G LGI                           +  L +PER 
Sbjct: 806 MFAIDQKQQLWAWGNNQFGQLGISLQRDEEEINLQTNKQVSSEFLEWKAQLKSLKNPERY 865

Query: 335 QGPFSESPVDQICTS---IVLVSCGWKHTAAISEGK-ILTWGWGGSHGTFSED 383
                + P  +  T    +  VSCG  HT  I+  + +LT G     G  S++
Sbjct: 866 IVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQELLTCGLAKYAGHQSQE 918



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 23/187 (12%)

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--SKLPYSEEVVCGG 297
           VKI   G  H+  + E G V+I+G  +   +     +    P+ I  S L +  E+  G 
Sbjct: 302 VKIVC-GHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGL-FFNEIAAGA 359

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQICTSIVLVSCGW 357
           YH+  L    ++Y WG N  G LGIG+ +    P+++      +  D+       + CG 
Sbjct: 360 YHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQL------TFFDRKKIQCQYLYCGD 413

Query: 358 KHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 416
           +H+A I+  K L TWG G  +            +LGHG  +D + P  +   ++V  L V
Sbjct: 414 QHSACITTNKELYTWGNGDYY------------RLGHGMLLDEMEPKKIEILQDVYVLDV 461

Query: 417 SCGFNHT 423
           + G  H+
Sbjct: 462 ALGTIHS 468



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 26/139 (18%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER--VQGPFSESPVDQICTS 349
           ++VCG +HT  LT  G ++ WG    GCLG G +D L +P +  + G F           
Sbjct: 303 KIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGLFFNE-------- 354

Query: 350 IVLVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-- 407
              ++ G  H+ A+++   + +GW          G ++ GQLG GN  + + P  + F  
Sbjct: 355 ---IAAGAYHSLALAKNNQV-YGW----------GVNNRGQLGIGNKENQLLPKQLTFFD 400

Query: 408 GENVKALQVSCGFNHTGAL 426
            + ++   + CG  H+  +
Sbjct: 401 RKKIQCQYLYCGDQHSACI 419


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.137    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,369,043,929
Number of Sequences: 23463169
Number of extensions: 330903574
Number of successful extensions: 919649
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4360
Number of HSP's successfully gapped in prelim test: 1407
Number of HSP's that attempted gapping in prelim test: 789096
Number of HSP's gapped (non-prelim): 39070
length of query: 430
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 285
effective length of database: 8,957,035,862
effective search space: 2552755220670
effective search space used: 2552755220670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)