Your job contains 1 sequence.
>014125
MGEEEQQQTLQQQQIYSDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPN
NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE
SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA
FNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI
GSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ
VVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGF
SFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGINGCEFNCQ
SEHENLNQDS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014125
(430 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119617 - symbol:AT4G21520 "AT4G21520" species... 1555 1.2e-159 1
UNIPROTKB|Q60525 - symbol:Wrap53 "Telomerase Cajal body p... 733 1.6e-72 1
MGI|MGI:2384933 - symbol:Wrap53 "WD repeat containing, an... 723 1.8e-71 1
RGD|1359624 - symbol:Wrap53 "WD repeat containing, antise... 721 2.9e-71 1
UNIPROTKB|F1ST42 - symbol:WRAP53 "Uncharacterized protein... 716 9.9e-71 1
UNIPROTKB|Q9BUR4 - symbol:WRAP53 "Telomerase Cajal body p... 715 1.3e-70 1
UNIPROTKB|F1MJW9 - symbol:WRAP53 "Telomerase Cajal body p... 710 4.3e-70 1
UNIPROTKB|Q3SWZ7 - symbol:WRAP53 "Telomerase Cajal body p... 710 4.3e-70 1
FB|FBgn0031782 - symbol:WDR79 "WD repeat domain 79 homolo... 498 1.2e-47 1
POMBASE|SPCC1020.09 - symbol:gnr1 "heterotrimeric G prote... 335 2.3e-30 1
ASPGD|ASPL0000048353 - symbol:AN2430 species:162425 "Emer... 254 1.7e-19 1
UNIPROTKB|E9PMR3 - symbol:WRAP53 "Telomerase Cajal body p... 185 3.3e-12 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 163 1.6e-11 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 177 1.6e-10 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 146 2.4e-10 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 176 1.0e-09 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 151 1.1e-09 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 152 1.7e-09 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 139 1.8e-09 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 168 2.3e-09 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 152 2.7e-09 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 152 2.7e-09 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 152 2.7e-09 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 152 2.7e-09 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 152 2.7e-09 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 166 2.7e-09 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 143 3.5e-09 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 143 4.8e-09 2
DICTYBASE|DDB_G0278769 - symbol:cstf1 "cleavage stimulati... 164 5.1e-09 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 159 6.8e-09 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 157 6.9e-09 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 164 8.5e-09 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 160 1.1e-08 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 145 1.5e-08 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 145 1.5e-08 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 158 1.6e-08 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 159 1.7e-08 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 162 1.8e-08 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 146 2.0e-08 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 157 2.0e-08 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 156 2.1e-08 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 153 5.6e-08 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 163 6.5e-08 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 150 7.0e-08 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 151 7.7e-08 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 151 8.1e-08 2
UNIPROTKB|P49027 - symbol:RACK1A "Guanine nucleotide-bind... 142 8.2e-08 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 151 9.5e-08 1
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 152 1.0e-07 1
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 140 1.0e-07 2
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 155 1.3e-07 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 147 1.3e-07 2
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 154 1.8e-07 1
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 152 2.2e-07 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 148 2.5e-07 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 151 2.8e-07 1
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 146 3.0e-07 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 149 3.5e-07 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 149 3.5e-07 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 149 3.5e-07 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 149 3.5e-07 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 149 3.6e-07 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 150 3.6e-07 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 141 4.8e-07 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 142 4.9e-07 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 141 4.9e-07 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 141 4.9e-07 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 147 5.8e-07 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 143 6.1e-07 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 140 6.4e-07 2
ASPGD|ASPL0000015866 - symbol:AN8183 species:162425 "Emer... 115 7.4e-07 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 134 9.2e-07 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 141 9.5e-07 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 144 9.9e-07 1
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 122 9.9e-07 2
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 146 9.9e-07 1
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 146 9.9e-07 1
UNIPROTKB|F1Q065 - symbol:TBL3 "Uncharacterized protein" ... 146 9.9e-07 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 144 1.1e-06 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 144 1.1e-06 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 141 1.2e-06 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 140 1.2e-06 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 134 1.3e-06 2
UNIPROTKB|Q8IU52 - symbol:TUWD12 "POC1 centriolar protein... 139 1.5e-06 1
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 141 1.8e-06 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 141 2.2e-06 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 137 2.4e-06 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 121 2.5e-06 2
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 141 2.7e-06 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 130 2.8e-06 1
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 129 3.0e-06 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 139 3.7e-06 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 134 4.9e-06 1
UNIPROTKB|Q9NYS7 - symbol:WSB2 "WD repeat and SOCS box-co... 135 5.7e-06 1
MGI|MGI:2144041 - symbol:Wsb2 "WD repeat and SOCS box-con... 135 5.7e-06 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 135 5.7e-06 1
UNIPROTKB|F5H280 - symbol:WSB2 "WD repeat and SOCS box-co... 135 5.7e-06 1
MGI|MGI:2384863 - symbol:Tbl3 "transducin (beta)-like 3" ... 139 5.8e-06 1
UNIPROTKB|B4DIE6 - symbol:WSB2 "cDNA FLJ59692, highly sim... 135 6.1e-06 1
MGI|MGI:2139593 - symbol:Wdr47 "WD repeat domain 47" spec... 128 6.2e-06 2
WARNING: Descriptions of 137 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2119617 [details] [associations]
symbol:AT4G21520 "AT4G21520" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000030352 OMA:NGVSFHP EMBL:AY142505 IPI:IPI00518877
RefSeq:NP_193883.2 UniGene:At.32622 ProteinModelPortal:Q8H1R6
SMR:Q8H1R6 STRING:Q8H1R6 EnsemblPlants:AT4G21520.1 GeneID:828237
KEGG:ath:AT4G21520 TAIR:At4g21520 InParanoid:Q8H1R6
PhylomeDB:Q8H1R6 ProtClustDB:CLSN2679986 Genevestigator:Q8H1R6
Uniprot:Q8H1R6
Length = 425
Score = 1555 (552.4 bits), Expect = 1.2e-159, P = 1.2e-159
Identities = 286/412 (69%), Positives = 343/412 (83%)
Query: 26 QENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLR 85
+ +Q+ +WP +RFDV P+RT+HF QFRT+ PNNFLKG+KWSPDGS FL SSED TL
Sbjct: 17 ESGEQKSSWPTMRFDVSPYRTHHFSKQFRTARNPNNFLKGLKWSPDGSCFLASSEDNTLS 76
Query: 86 IFSLPENGISYDVNACSL-AKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAST 144
+F LP++G D N + ++DSY ASL+V EGESVYDFCW+P+MS SDP +CVFA++
Sbjct: 77 LFHLPQDG--GDSNGYGVPVPEEDSYGASLLVNEGESVYDFCWYPYMSVSDPLTCVFATS 134
Query: 145 TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRP 204
TRDHPIHLWD+T+G LRCTYRAYDA+DEITAAFSV FNP GTKIFAGYN S+RVFD+HRP
Sbjct: 135 TRDHPIHLWDSTSGELRCTYRAYDAMDEITAAFSVGFNPDGTKIFAGYNSSIRVFDLHRP 194
Query: 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ 264
GRDF +YSTL+ NKEGQAGI+S +AFSPT++GMLA+GSY QT+ IYREDNMELLYVLHGQ
Sbjct: 195 GRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYVLHGQ 254
Query: 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSG 324
EGGVTHVQFS+DGNYLYTGGRKDPYILCWD+RK+V++VYKLYR++E+TNQR+ FDIEP G
Sbjct: 255 EGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTNQRVFFDIEPCG 314
Query: 325 RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPV---D 381
RHLGTGGQDGLVH+YDLQTG W+SG+QAA+DTVN FSFHP+LPMAA+SSGHRRF + D
Sbjct: 315 RHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNAFSFHPYLPMAATSSGHRRFAIPDDD 374
Query: 382 DFED---LHLSGDENCVSVWSFLYASMMENA-DGINGCEFNCQSEHENLNQD 429
D ED L L DENCVS+WSF Y +N D NG +S +N+ ++
Sbjct: 375 DGEDKNELQLKADENCVSLWSF-YVE--DNTYDENNGVA--SESHLQNVTEE 421
>UNIPROTKB|Q60525 [details] [associations]
symbol:Wrap53 "Telomerase Cajal body protein 1"
species:10036 "Mesocricetus auratus" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0015030 "Cajal body" evidence=ISS] [GO:0032203
"telomere formation via telomerase" evidence=ISS] [GO:0051973
"positive regulation of telomerase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:U13152 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0051973
GO:GO:0015030 GO:GO:0005697 GO:GO:0032203 HOVERGEN:HBG098609
ProteinModelPortal:Q60525 Uniprot:Q60525
Length = 538
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 152/350 (43%), Positives = 224/350 (64%)
Query: 50 YNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDS 109
+++FR S NFLKG KW+PDGS LT+S D TLRI++LP ++ + + D
Sbjct: 149 WSEFRAHS--ENFLKGCKWAPDGSCILTNSADNTLRIYNLPP-----ELYSATEQVDYAE 201
Query: 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA 169
L + EG+++YD+CW+ MS+S P + AS++R++PIH+WDA TG LR ++RAY+
Sbjct: 202 MVPVLRMVEGDTIYDYCWYSLMSSSQPDTSYVASSSRENPIHIWDAFTGELRASFRAYNH 261
Query: 170 VDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIA 229
+DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IA
Sbjct: 262 LDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIA 320
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP+ + A GSY +T +Y D+ L +L G +GG+TH+ F DGN ++G RKD
Sbjct: 321 FSPSQP-LYACGSYGRTLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAE 379
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQ-----TG 344
+LCWDLR+ +++ L R TNQRI FD++PSG+ L +G +G+V ++D+ +
Sbjct: 380 LLCWDLRQPGHLLWSLSREVT-TNQRIYFDLDPSGQFLVSGNTNGMVSVWDISGAFGDSS 438
Query: 345 KW--ISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDE 392
K + F D NG S HP LP+ A++SG R FP E + SGDE
Sbjct: 439 KLGPVMTFLPQKDCTNGVSLHPSLPLLATASGQRMFP----EPTN-SGDE 483
>MGI|MGI:2384933 [details] [associations]
symbol:Wrap53 "WD repeat containing, antisense to TP53"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005697
"telomerase holoenzyme complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0015030 "Cajal body" evidence=ISO]
[GO:0032203 "telomere formation via telomerase" evidence=ISO]
[GO:0051973 "positive regulation of telomerase activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384933 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0003723 GO:GO:0051973 GO:GO:0015030 GO:GO:0005697
EMBL:AL731687 GO:GO:0032203 CTD:55135 HOGENOM:HOG000030352
HOVERGEN:HBG098609 OrthoDB:EOG4N5VWP OMA:EYAEMVP EMBL:BC021790
EMBL:BC069868 IPI:IPI00121432 RefSeq:NP_659073.1 UniGene:Mm.31586
ProteinModelPortal:Q8VC51 SMR:Q8VC51 STRING:Q8VC51
PhosphoSite:Q8VC51 PRIDE:Q8VC51 Ensembl:ENSMUST00000048139
GeneID:216853 KEGG:mmu:216853 UCSC:uc007jqj.1
GeneTree:ENSGT00390000010169 InParanoid:Q8VC51 NextBio:375396
Bgee:Q8VC51 CleanEx:MM_WDR79 Genevestigator:Q8VC51
GermOnline:ENSMUSG00000041346 Uniprot:Q8VC51
Length = 532
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 158/384 (41%), Positives = 228/384 (59%)
Query: 20 EVTEAAQENQQEY----TWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF 75
E TE E + E T+ F P +++F T S NFLKG KW+PDGS
Sbjct: 111 EATEGVSEERAEVDEGDTFWTYSFSQVPRYLSGSWSEFSTRS--ENFLKGCKWAPDGSCI 168
Query: 76 LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135
LT+S D LRI++LP S D L + EG+++YD+CW+ MS++
Sbjct: 169 LTNSADNVLRIYNLPPELYSEQEQV-----DYAEMVPVLRMVEGDTIYDYCWYSLMSSTQ 223
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS 195
P + AS++R++PIH+WDA TG LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++
Sbjct: 224 PDTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRT 283
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
VRVF RPGRD E +T K+GQ+GI+S IAFSP+ + A GSY +T +Y D+
Sbjct: 284 VRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPSQP-LYACGSYGRTIGLYAWDDG 341
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQR 315
L +L G +GG+TH+ F DGN ++G RKD +LCWDLR+ +++ L R TNQR
Sbjct: 342 SPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLSREVT-TNQR 400
Query: 316 ILFDIEPSGRHLGTGGQDGLVHIYDLQTG-------KWISGFQAAADTVNGFSFHPFLPM 368
I FD++PSG+ L +G G+V ++D+ + + F D NG S HP LP+
Sbjct: 401 IYFDLDPSGQFLVSGNTSGVVSVWDISGALSDDSKLEPVVTFLPQKDCTNGVSLHPTLPL 460
Query: 369 AASSSGHRRFPVDDFEDLHLSGDE 392
A++SG R FP E + SGDE
Sbjct: 461 LATASGQRVFP----EPTN-SGDE 479
>RGD|1359624 [details] [associations]
symbol:Wrap53 "WD repeat containing, antisense to TP53"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005697
"telomerase holoenzyme complex" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0015030 "Cajal body" evidence=ISO;ISS]
[GO:0032203 "telomere formation via telomerase" evidence=ISO;ISS]
[GO:0051973 "positive regulation of telomerase activity"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1359624 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0003723 GO:GO:0051973 GO:GO:0015030 GO:GO:0005697
GO:GO:0032203 CTD:55135 HOGENOM:HOG000030352 HOVERGEN:HBG098609
OrthoDB:EOG4N5VWP OMA:EYAEMVP GeneTree:ENSGT00390000010169
EMBL:BC083696 IPI:IPI00208566 RefSeq:NP_001007611.1
UniGene:Rn.23316 ProteinModelPortal:Q5XII5 STRING:Q5XII5
Ensembl:ENSRNOT00000014261 GeneID:287432 KEGG:rno:287432
UCSC:RGD:1359624 InParanoid:Q5XII5 NextBio:626119
Genevestigator:Q5XII5 GermOnline:ENSRNOG00000010520 Uniprot:Q5XII5
Length = 532
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 155/378 (41%), Positives = 232/378 (61%)
Query: 23 EAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK 82
E A ++ + W VP + + +++F T S NFLKG KW+PDGS LT+S D
Sbjct: 119 EPAAVDEGDIFWSYSFSQVPQYLSGS-WSEFSTRS--ENFLKGCKWAPDGSCILTNSADN 175
Query: 83 TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142
LRI++LP ++ + S D L + EG+++YD+CW+ MS++ P + A
Sbjct: 176 VLRIYNLPP-----ELYSESEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVA 230
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVH 202
S++R++PIH+WDA TG LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF
Sbjct: 231 SSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTS 290
Query: 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262
RPGRD E +T K+GQ+GI+S +AFSP + A GSY +T +Y D+ L +L
Sbjct: 291 RPGRDCEVRTTF-AKKQGQSGIISCLAFSPAQP-LYACGSYGRTLGLYAWDDGSPLALLG 348
Query: 263 GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEP 322
G +GG+TH+ F DGN ++G RKD +LCWDLR+ +++ L R TNQRI FD++P
Sbjct: 349 GHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLSREVT-TNQRIYFDLDP 407
Query: 323 SGRHLGTGGQDGLVHIYDLQTGKW--------ISGFQAAADTVNGFSFHPFLPMAASSSG 374
SG+ L +G G+V ++D+ +G + + F D NG S HP LP+ A++SG
Sbjct: 408 SGQFLVSGNTSGVVSVWDI-SGAFSDCKQLEPVMTFLPQDDCTNGVSLHPTLPLLATASG 466
Query: 375 HRRFPVDDFEDLHLSGDE 392
R FP E + SGDE
Sbjct: 467 QRMFP----EPTN-SGDE 479
>UNIPROTKB|F1ST42 [details] [associations]
symbol:WRAP53 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051973 "positive regulation of telomerase activity"
evidence=IEA] [GO:0032203 "telomere formation via telomerase"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005697 "telomerase holoenzyme complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003723 GO:GO:0051973
GO:GO:0015030 GO:GO:0005697 GO:GO:0032203 OMA:EYAEMVP
GeneTree:ENSGT00390000010169 EMBL:CU914279 RefSeq:XP_003131992.1
UniGene:Ssc.2732 ProteinModelPortal:F1ST42
Ensembl:ENSSSCT00000019533 GeneID:100522033 KEGG:ssc:100522033
Uniprot:F1ST42
Length = 539
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 157/376 (41%), Positives = 226/376 (60%)
Query: 23 EAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK 82
E A E++ TW F P +++F T P NFLKG KW+PDGS LT+S D
Sbjct: 126 EPAPEDEGYTTWNY-SFSQLPRFLSGSWSEFSTQ--PENFLKGCKWAPDGSCILTNSADN 182
Query: 83 TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142
LRI++LP S + A+ L + EG+++YD+CW+ MS++ P + A
Sbjct: 183 VLRIYNLPPELYS-EGEQLEYAE----MAPVLRMMEGDTIYDYCWYSLMSSAQPDTSYVA 237
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVH 202
S++R +PIH+WDA TG LR ++R+Y+ +DE+TAA S+ F+P G+++F G+N++VRVF
Sbjct: 238 SSSRQNPIHIWDAFTGELRASFRSYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTS 297
Query: 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262
RPGRD E +T ++GQ+GI+S IAFSPT + A GSY ++ +Y D+ L +L
Sbjct: 298 RPGRDCEVRATF-AKRQGQSGIISCIAFSPTQP-LYACGSYGRSLGLYAWDDGSPLALLG 355
Query: 263 GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEP 322
G +GGVTH+ F DGN ++G RKD +LCWDLR+ ++ L R TNQRI FD++P
Sbjct: 356 GHQGGVTHLCFHPDGNRFFSGARKDAELLCWDLRQPANPLWSLSREVT-TNQRIYFDLDP 414
Query: 323 SGRHLGTGGQDGLVHIYDLQ----TGKW--ISGFQAAADTVNGFSFHPFLPMAASSSGHR 376
+G+ L +G G V ++D GK + F D NG S HP LP+ A++SG R
Sbjct: 415 TGQFLVSGSTSGAVSVWDTSGAGHEGKPEPVLSFLPQKDCTNGVSLHPSLPLLATASGQR 474
Query: 377 RFPVDDFEDLHLSGDE 392
FP + E SGDE
Sbjct: 475 VFP-EPTE----SGDE 485
>UNIPROTKB|Q9BUR4 [details] [associations]
symbol:WRAP53 "Telomerase Cajal body protein 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0051973 "positive regulation of telomerase
activity" evidence=IDA] [GO:0005697 "telomerase holoenzyme complex"
evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032203 "telomere formation via
telomerase" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 EMBL:CH471108 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0003723 GO:GO:0051973 GO:GO:0015030 GO:GO:0005697
GO:GO:0032203 CTD:55135 HOGENOM:HOG000030352 HOVERGEN:HBG098609
OrthoDB:EOG4N5VWP EMBL:AY766322 EMBL:DQ431240 EMBL:DQ431241
EMBL:AK001247 EMBL:AK056669 EMBL:BC002336 IPI:IPI00306087
RefSeq:NP_001137462.1 RefSeq:NP_001137463.1 RefSeq:NP_001137464.1
RefSeq:NP_060551.2 UniGene:Hs.408312 ProteinModelPortal:Q9BUR4
SMR:Q9BUR4 DIP:DIP-56796N IntAct:Q9BUR4 STRING:Q9BUR4
PhosphoSite:Q9BUR4 DMDM:74761275 PaxDb:Q9BUR4 PeptideAtlas:Q9BUR4
PRIDE:Q9BUR4 Ensembl:ENST00000316024 Ensembl:ENST00000396463
Ensembl:ENST00000431639 Ensembl:ENST00000457584 GeneID:55135
KEGG:hsa:55135 UCSC:uc002gip.3 GeneCards:GC17P007589
HGNC:HGNC:25522 HPA:HPA023026 HPA:HPA028130 MIM:612661 MIM:613988
neXtProt:NX_Q9BUR4 PharmGKB:PA164727568 InParanoid:Q9BUR4
OMA:EYAEMVP PhylomeDB:Q9BUR4 GenomeRNAi:55135 NextBio:58818
ArrayExpress:Q9BUR4 Bgee:Q9BUR4 CleanEx:HS_WDR79
Genevestigator:Q9BUR4 GermOnline:ENSG00000141499 Uniprot:Q9BUR4
Length = 548
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 155/376 (41%), Positives = 228/376 (60%)
Query: 23 EAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK 82
E A E++ + W F P +++F T P NFLKG KW+PDGS LT+S D
Sbjct: 135 EPAAEDEGDTAWNY-SFSQLPRFLSGSWSEFSTQ--PENFLKGCKWAPDGSCILTNSADN 191
Query: 83 TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142
LRI++LP + ++ A+ L + EG+++YD+CW+ MS++ P + A
Sbjct: 192 ILRIYNLPPE-LYHEGEQVEYAE----MVPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVA 246
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVH 202
S++R++PIH+WDA TG LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF
Sbjct: 247 SSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTA 306
Query: 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262
RPGRD E +T K+GQ+GI+S IAFSP + A GSY ++ +Y D+ L +L
Sbjct: 307 RPGRDCEVRATF-AKKQGQSGIISCIAFSPAQP-LYACGSYGRSLGLYAWDDGSPLALLG 364
Query: 263 GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEP 322
G +GG+TH+ F DGN ++G RKD +LCWDLR++ ++ L R TNQRI FD++P
Sbjct: 365 GHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVT-TNQRIYFDLDP 423
Query: 323 SGRHLGTGGQDGLVHIYDLQ----TGKW--ISGFQAAADTVNGFSFHPFLPMAASSSGHR 376
+G+ L +G G V ++D GK + F D NG S HP LP+ A++SG R
Sbjct: 424 TGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATASGQR 483
Query: 377 RFPVDDFEDLHLSGDE 392
FP + E SGDE
Sbjct: 484 VFP-EPTE----SGDE 494
>UNIPROTKB|F1MJW9 [details] [associations]
symbol:WRAP53 "Telomerase Cajal body protein 1"
species:9913 "Bos taurus" [GO:0051973 "positive regulation of
telomerase activity" evidence=IEA] [GO:0032203 "telomere formation
via telomerase" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005697 "telomerase holoenzyme
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0003723 GO:GO:0051973 GO:GO:0015030 GO:GO:0005697
GO:GO:0032203 IPI:IPI00705908 UniGene:Bt.20351 OMA:EYAEMVP
GeneTree:ENSGT00390000010169 EMBL:DAAA02048796
Ensembl:ENSBTAT00000001421 Uniprot:F1MJW9
Length = 540
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 156/383 (40%), Positives = 231/383 (60%)
Query: 18 DTE-VTEAAQENQQEYT-WPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF 75
D E V+E + YT W F P +++F T P NFLKG KW+PDGS
Sbjct: 119 DVEGVSEELTPEDEGYTIWNY-NFSQVPRFLSGSWSEFITQ--PENFLKGCKWAPDGSCI 175
Query: 76 LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135
LT+S D LRI++LP Y+ + L + EG+++YD+CW+ MS++
Sbjct: 176 LTNSADNILRIYNLPPE--LYNEGE---QLEYAEMAPVLRMVEGDTIYDYCWYSLMSSAQ 230
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS 195
P + AS++R++PIH+WDA TG LR ++R+Y+ +DE+TAA S+ F+P G+++F G+N++
Sbjct: 231 PDTSYVASSSRENPIHIWDAFTGELRASFRSYNHLDELTAAHSLCFSPDGSQLFCGFNRT 290
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
VRVF RPGRD E +T ++GQ+GI+S IAFSPT + A GSY ++ +Y ++
Sbjct: 291 VRVFSTSRPGRDCEVRTTF-AKRQGQSGIISCIAFSPTQP-LYACGSYGRSLGLYTWEDG 348
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQR 315
L +L G +GG+TH+ F DGN ++G RKD +LCWDLR+ ++ L R TNQR
Sbjct: 349 SPLALLGGHQGGITHLCFHPDGNCFFSGARKDAELLCWDLRQLGHPLWSLSREVT-TNQR 407
Query: 316 ILFDIEPSGRHLGTGGQDGLVHIYD-----LQTG-KWISGFQAAADTVNGFSFHPFLPMA 369
I FD++P+G+ L +G G V ++D L++ + + FQ D NG S HP LP+
Sbjct: 408 IYFDLDPTGQFLVSGSTSGAVSVWDTGGAGLESKPEPVLSFQPQKDCTNGVSLHPSLPLL 467
Query: 370 ASSSGHRRFPVDDFEDLHLSGDE 392
A++SG R FP + E SGDE
Sbjct: 468 ATASGQRVFP-EPTE----SGDE 485
>UNIPROTKB|Q3SWZ7 [details] [associations]
symbol:WRAP53 "Telomerase Cajal body protein 1"
species:9913 "Bos taurus" [GO:0015030 "Cajal body" evidence=ISS]
[GO:0032203 "telomere formation via telomerase" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005697 "telomerase
holoenzyme complex" evidence=ISS] [GO:0051973 "positive regulation
of telomerase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0003723 GO:GO:0051973
GO:GO:0015030 GO:GO:0005697 GO:GO:0032203 EMBL:BC104583
IPI:IPI00705908 RefSeq:NP_001030245.1 UniGene:Bt.20351
ProteinModelPortal:Q3SWZ7 STRING:Q3SWZ7 GeneID:509631
KEGG:bta:509631 CTD:55135 HOGENOM:HOG000030352 HOVERGEN:HBG098609
InParanoid:Q3SWZ7 OrthoDB:EOG4N5VWP NextBio:20869060 Uniprot:Q3SWZ7
Length = 540
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 156/383 (40%), Positives = 231/383 (60%)
Query: 18 DTE-VTEAAQENQQEYT-WPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF 75
D E V+E + YT W F P +++F T P NFLKG KW+PDGS
Sbjct: 119 DVEGVSEELTPEDEGYTIWNY-NFSQVPRFLSGSWSEFITQ--PENFLKGCKWAPDGSCI 175
Query: 76 LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135
LT+S D LRI++LP Y+ + L + EG+++YD+CW+ MS++
Sbjct: 176 LTNSADNILRIYNLPPE--LYNEGE---QLEYAEMAPVLRMVEGDTIYDYCWYSLMSSAQ 230
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS 195
P + AS++R++PIH+WDA TG LR ++R+Y+ +DE+TAA S+ F+P G+++F G+N++
Sbjct: 231 PDTSYVASSSRENPIHIWDAFTGELRASFRSYNHLDELTAAHSLCFSPDGSQLFCGFNRT 290
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
VRVF RPGRD E +T ++GQ+GI+S IAFSPT + A GSY ++ +Y ++
Sbjct: 291 VRVFSTSRPGRDCEVRTTF-AKRQGQSGIISCIAFSPTQP-LYACGSYGRSLGLYTWEDG 348
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQR 315
L +L G +GG+TH+ F DGN ++G RKD +LCWDLR+ ++ L R TNQR
Sbjct: 349 SPLALLGGHQGGITHLCFHPDGNCFFSGARKDAELLCWDLRQLGHPLWSLSREVT-TNQR 407
Query: 316 ILFDIEPSGRHLGTGGQDGLVHIYD-----LQTG-KWISGFQAAADTVNGFSFHPFLPMA 369
I FD++P+G+ L +G G V ++D L++ + + FQ D NG S HP LP+
Sbjct: 408 IYFDLDPTGQFLVSGSTSGAVSVWDTGGAGLESKPEPVLSFQPQKDCTNGVSLHPSLPLL 467
Query: 370 ASSSGHRRFPVDDFEDLHLSGDE 392
A++SG R FP + E SGDE
Sbjct: 468 ATASGQRVFP-EPTE----SGDE 485
>FB|FBgn0031782 [details] [associations]
symbol:WDR79 "WD repeat domain 79 homolog" species:7227
"Drosophila melanogaster" [GO:0019001 "guanyl nucleotide binding"
evidence=ISS] [GO:0034512 "box C/D snoRNA binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0034512 FlyBase:FBgn0031782 EMBL:BT012509 RefSeq:NP_608997.2
UniGene:Dm.4396 SMR:Q9VMH1 MINT:MINT-933904 GeneID:33865
KEGG:dme:Dmel_CG9226 UCSC:CG9226-RA CTD:33865 InParanoid:Q9VMH1
OMA:GITQLRY GenomeRNAi:33865 NextBio:785685 Uniprot:Q9VMH1
Length = 543
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 111/330 (33%), Positives = 175/330 (53%)
Query: 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114
+S+ ++ KG WSPDG+ L + + +P + Y + A+ ++ +
Sbjct: 177 SSTEAQHYTKGCYWSPDGTCLLVPVHLDGMHVIEMPSD--LYSADTVQPARSLTKLQSEV 234
Query: 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEIT 174
V EG +VYD W+PHM++ P +C++ +T + PIH+WDA G LRC+Y YDAVDE+
Sbjct: 235 HVPEGGTVYDCVWYPHMNSLQPETCLWLATRQHEPIHMWDAFDGSLRCSYSGYDAVDEVM 294
Query: 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH 234
AA S+AF+ G +I+AGY + +++FD RPGR + Y +S IA + H
Sbjct: 295 AAISLAFSHDGEQIYAGYKRCIKIFDTSRPGRFCDDYPVKFA--------ISCIAQTTAH 346
Query: 235 TGMLAIGS---YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN---YLYTGGRKDP 288
L G+ Y Q + L+ L G +GG+T +++ GN +L++G RK
Sbjct: 347 PHTLTCGNWHGYIQHFDLRCSHKQGPLFTLGGHKGGITQLRYGEFGNGEWHLFSGARKCD 406
Query: 289 YILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
IL WD+R Q + +L R + TNQRI FD+ L +G G V+++DL+ S
Sbjct: 407 KILQWDMRNYKQPLVELQRHVD-TNQRIQFDLASDSNWLASGDTRGFVNVWDLKKYGDPS 465
Query: 349 GFQAAADTVNGFSFHPFLPMAASSSGHRRF 378
+D NG + +P +P+ A+SSG F
Sbjct: 466 VLPLHSDCCNGVALNPAMPILATSSGQFHF 495
>POMBASE|SPCC1020.09 [details] [associations]
symbol:gnr1 "heterotrimeric G protein beta subunit Gnr1"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IPI]
[GO:0045744 "negative regulation of G-protein coupled receptor
protein signaling pathway" evidence=IMP] [GO:0090029 "negative
regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IMP] [GO:0004871 "signal
transducer activity" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC1020.09 GO:GO:0005829
GO:GO:0007165 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0005834 PIR:T40831
RefSeq:NP_587950.1 ProteinModelPortal:O59762
EnsemblFungi:SPCC1020.09.1 GeneID:2539303 KEGG:spo:SPCC1020.09
eggNOG:NOG251925 OMA:NCTIDIY OrthoDB:EOG44QX9D NextBio:20800470
GO:GO:0090029 Uniprot:O59762
Length = 399
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 92/310 (29%), Positives = 142/310 (45%)
Query: 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTE 118
P NF +WSPDGS+ L+ +ED+ L +++P + +S + SY+
Sbjct: 45 PLNFFHSSRWSPDGSTILSLTEDQCLNCWNVPFSDLSKKADGPLNFSKHLSYKYQ----S 100
Query: 119 GESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFS 178
E+VY + W+ M DP+S +FA ++RD PI L + TTG + +Y D + +
Sbjct: 101 PETVYSYSWYSRMKLDDPSSNLFAVSSRDQPIKLINFTTGKNKASYHMIDHQERYQGSHC 160
Query: 179 VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE-----GQAGIMSAIAFSPT 233
+ F G + AG + F++ ++ + G K GI S + +P
Sbjct: 161 LQFTNDGEYLIAGDKNCLHHFNIRTGCKEPVMTTVTHGYKVPLWEFSLKGIQSCFSLNPM 220
Query: 234 HTGMLAIGSYSQTSAIYREDNMELLYVLHGQE--GGVTHVQFSRDGNYLYTGGRKDPYIL 291
+ LA+G+YS IY + + E GVTH+Q+ DG LY G R I
Sbjct: 221 DSKTLAVGTYSNRVGIYNDCGRRPCQLEFSIERGNGVTHLQWCEDGEKLYVGSRCSDKIE 280
Query: 292 CWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY---DLQTGKWIS 348
WD+R +VY L TNQRILFD + L GG DG + + DL ++
Sbjct: 281 VWDIRYVRDMVYALEGHRGDTNQRILFDTDKKDEILA-GGTDGSIRRWRNKDLVEETHVT 339
Query: 349 G-FQAAADTV 357
G + +TV
Sbjct: 340 GNYDLTVNTV 349
>ASPGD|ASPL0000048353 [details] [associations]
symbol:AN2430 species:162425 "Emericella nidulans"
[GO:0090029 "negative regulation of pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BN001307 EMBL:AACD01000040
eggNOG:NOG251925 OrthoDB:EOG44QX9D RefSeq:XP_660034.1
ProteinModelPortal:Q5BAK0 EnsemblFungi:CADANIAT00009142
GeneID:2874663 KEGG:ani:AN2430.2 HOGENOM:HOG000217864 OMA:NGVSFHP
Uniprot:Q5BAK0
Length = 430
Score = 254 (94.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 83/289 (28%), Positives = 130/289 (44%)
Query: 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113
+ S N F K +WSPDG++ LT S D +R + +P D+ L + Q ++ S
Sbjct: 49 KLDSASNEFFKSAEWSPDGTTILTDSSDYHIRTYIVPA-----DL----LEERQSPHQLS 99
Query: 114 --LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD 171
V+ GE Y ++P S +P+S VF S+ RDHPI L A L TY + +
Sbjct: 100 PYSVLASGEPTYASTFYPFYSLQEPSSAVFLSSVRDHPIRLASALAPTLLATYSLVNPMT 159
Query: 172 E-ITAAFSVAFNPT--GTKIFAGYNKSVRVFDVHRPGRDF---------EKYSTLKGNKE 219
E + + P GT G + + +FDV RPG + K L G
Sbjct: 160 EAFITPHCILYPPALGGTHFLTGSDSLICLFDVSRPGNEGPVSWMPTIPSKRKQLIGGGV 219
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G GI+SA+A SP G+LA G++S+ +Y + GQ G ++ + +
Sbjct: 220 GMKGIVSALALSPNEGGILAAGTFSRNIGLYDSNGA-------GQSLGSFNISKTEAARH 272
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLG 328
+ GG +L W + +Y R S+ +++DI +G+ LG
Sbjct: 273 I--GGSGVTQLL-WS--PCGRYLYIAERKSDGV---MIYDIRVTGQLLG 313
Score = 172 (65.6 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 58/198 (29%), Positives = 92/198 (46%)
Query: 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED---------NMELLYV 260
K L G G GI+SA+A SP G+LA G++S+ +Y + N+
Sbjct: 210 KRKQLIGGGVGMKGIVSALALSPNEGGILAAGTFSRNIGLYDSNGAGQSLGSFNISKTEA 269
Query: 261 L-HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFD 319
H GVT + +S G YLY RK ++ +D+R Q++ L + TNQR+ D
Sbjct: 270 ARHIGGSGVTQLLWSPCGRYLYIAERKSDGVMIYDIRVTGQLLGWLQGRNTSTNQRMKID 329
Query: 320 IEPSGR---H-LGTGGQDGLV-------HIYDLQTGKWISGFQAAADTVNGFSFHPFLPM 368
+ P+G H + GG DG+V H Q W ++ D+++ HP +
Sbjct: 330 LVPTGEGDGHGIWGGGTDGVVRFWRDPTHSAGAQDPTW--EWKLHDDSLSSTVMHPIGNI 387
Query: 369 AASSSGHRRFPVDDFEDL 386
A++SG + F D+ D+
Sbjct: 388 LATTSGQKHFK--DYTDM 403
>UNIPROTKB|E9PMR3 [details] [associations]
symbol:WRAP53 "Telomerase Cajal body protein 1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001680 Pfam:PF00400 SMART:SM00320
GO:GO:0005737 GO:GO:0005730 EMBL:AC087388 HGNC:HGNC:25522
IPI:IPI00982224 ProteinModelPortal:E9PMR3 SMR:E9PMR3
Ensembl:ENST00000498311 ArrayExpress:E9PMR3 Bgee:E9PMR3
Uniprot:E9PMR3
Length = 287
Score = 185 (70.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 23 EAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK 82
E A E++ + W F P +++F T P NFLKG KW+PDGS LT+S D
Sbjct: 135 EPAAEDEGDTAWNY-SFSQLPRFLSGSWSEFSTQ--PENFLKGCKWAPDGSCILTNSADN 191
Query: 83 TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142
LRI++LP + ++ A+ L + EG+++YD+CW+ MS++ P + +
Sbjct: 192 ILRIYNLPPE-LYHEGEQVEYAE----MVPVLRMVEGDTIYDYCWYSLMSSAQPDTS-YT 245
Query: 143 STTRDHPIHLWDATTGLLR 161
+ + W A G R
Sbjct: 246 GVSVSMSLSAWPAAAGRTR 264
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 163 (62.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 61/241 (25%), Positives = 111/241 (46%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D I +WD +G + T + + F V+FNP I +G ++++V
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEY-----VFGVSFNPQSNLIVSGSFDENV 154
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
R++DV+ G E + + + G+ F+ T ++ GSY T I+ +
Sbjct: 155 RIWDVNT-G---ECTKMISAHSDPVTGVH----FNRDGT-LVVSGSYDGTVRIWDTTTGQ 205
Query: 257 LLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQR 315
LL + ++G V+ V+FS +G ++ G D + W + + K Y H N++
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAG-TLDNTLRLWSYNNNKKCL-KTYTG--HKNEK 261
Query: 316 I-LFDI--EPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+F G+ + TG +D L++IY+LQT + + D V + HP + AS
Sbjct: 262 YCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Query: 373 S 373
+
Sbjct: 322 A 322
Score = 113 (44.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 42/156 (26%), Positives = 73/156 (46%)
Query: 142 ASTTRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPTGTKIF--AGYNKSVRV 198
AS + D I +W A G T + + + +I A+S +K+ A +K++++
Sbjct: 62 ASASADKTIKIWGAYDGKFERTLEGHKEGISDI--AWS-----QDSKLICSASDDKTIKI 114
Query: 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
+DV G+ TLKG+KE G+ +F+P + ++ GS+ + I+ + E
Sbjct: 115 WDVES-GK---MVKTLKGHKEYVFGV----SFNP-QSNLIVSGSFDENVRIWDVNTGECT 165
Query: 259 YVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
++ VT V F+RDG L G D + WD
Sbjct: 166 KMISAHSDPVTGVHFNRDGT-LVVSGSYDGTVRIWD 200
Score = 60 (26.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SPDG ++S DKT++I+
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIW 73
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 80/308 (25%), Positives = 135/308 (43%)
Query: 36 LIRFDVPPH-RTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGI 94
L+ + + PH R Y + + + +++SP G+ ++S DKT+R++ L G
Sbjct: 42 LMLWSLKPHARAYRYVGH-------KDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGK 94
Query: 95 SYDVNACSL-AKDQD-SYEASLVVTEGE-------SVYD--FCW--FPHM-----SASDP 136
S + A + + D S + +VT E S+Y F + + H + P
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKS 195
+ S + D I +WD T+ +C D+V A F V F+P GT I AG + +
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTSK--QCVNNFSDSVG--FANF-VDFSPNGTCIASAGSDHA 209
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
VR++D+ R R + Y G+ + ++F P+ ++ S + +
Sbjct: 210 VRIWDI-RMNRLLQHYQV------HSCGV-NCLSFHPSGNSLVTASSDGTVKILDLVEG- 260
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTN-Q 314
L+Y L G G V V FS+DG L+T G D +L W R + V+ YR N +
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGE-LFTSGGADAQVLVW--RTSFNQVH--YRDPSKRNLK 315
Query: 315 RILFDIEP 322
R+ + P
Sbjct: 316 RLHLEASP 323
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 66/243 (27%), Positives = 98/243 (40%)
Query: 137 TSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN 193
TS F+ + WD L L+ RAY V S+ F+P G + A +
Sbjct: 22 TSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRD 81
Query: 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253
K+VR++ + R G K S K + A + S + FS L S ++ ++
Sbjct: 82 KTVRLWVLDRKG----KSSEFKAHT---APVRS-VDFSADGQ-FLVTASEDKSIKVWSMY 132
Query: 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTN 313
LY L+ V +FS DG L +D I WD Q V S N
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTSK-QCVNNFSDSVGFAN 190
Query: 314 QRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPF--LPMAAS 371
D P+G + + G D V I+D++ + + +Q + VN SFHP + AS
Sbjct: 191 ---FVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Query: 372 SSG 374
S G
Sbjct: 248 SDG 250
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 146 (56.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 63/246 (25%), Positives = 109/246 (44%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191
+SD V AS D + LWD TG L T + AF V FNP I +G
Sbjct: 80 SSDARFIVSASD--DKTLKLWDVETGSLIKTL-----IGHTNYAFCVNFNPQSNMIVSGS 132
Query: 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIY 250
++++VR++DV G+ + L + + ++A+ F+ G L + S Y I+
Sbjct: 133 FDETVRIWDV-TTGKCLK---VLPAHSDP----VTAVDFN--RDGSLIVSSSYDGLCRIW 182
Query: 251 REDNMELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSS 309
+ L E V+ V+FS +G ++ G D + W++ A + K Y
Sbjct: 183 DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVG-TLDNTLRLWNISSAKFL--KTYTGH 239
Query: 310 EHTNQRI--LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLP 367
+ I F + +G+ + +G +D VH+++L + K + + +TV + HP
Sbjct: 240 VNAQYCISSAFSVT-NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN 298
Query: 368 MAASSS 373
+ AS S
Sbjct: 299 LIASGS 304
Score = 67 (28.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 40 DVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSL 89
++P ++ Y +T + N + +K+S DG ++S DKT+R +++
Sbjct: 4 EIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI 53
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 176 (67.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 82/328 (25%), Positives = 142/328 (43%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFS-----LPE--NGISYDVNACSLAKD-----QDSY 110
++ + +SPDG ++ S D T++I+ L + +G S V + + + D SY
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSY 812
Query: 111 EASLVVTE---GESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR-CTYRA 166
+ ++ + + GE + F PH S FA ++ D+T + T
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSI----WSVAFAPDGKELASASDDSTIKIWDLATGEL 868
Query: 167 YDAVDEITAAF-SVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIM 225
+D + + SVAF+P G K+ A + + V P L+ + EG++G +
Sbjct: 869 QQTLDSHSQSVRSVAFSPDG-KLLASSSLDSTI-KVWNPAT-----GELQQSLEGRSGWV 921
Query: 226 SAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGR 285
++AFSP LA GS T ++ ELL L G V V FS DG L +
Sbjct: 922 KSVAFSPDGK-KLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSS- 979
Query: 286 KDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGK 345
D I W+ + + ++ + + + F P G+HL +G D + ++DL T +
Sbjct: 980 SDTTIKLWN--STTGELQQTFKGHDLWIRAVAFS--PDGKHLVSGSDDNTIKLWDLATSE 1035
Query: 346 WISGFQAAADTVNGFSFHPFLPMAASSS 373
+ + +V+ +F P ASSS
Sbjct: 1036 LQQSLEDHSRSVHAVAFSPDDKQLASSS 1063
Score = 169 (64.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 67/253 (26%), Positives = 119/253 (47%)
Query: 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGI-------SYDVNACSLAKDQ-----DS 109
+++ + +SPDG ++ S+D T++++ L + + S V+A + + D S
Sbjct: 1004 WIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSS 1063
Query: 110 YEASLVVTE---GE---SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCT 163
++++ + + GE ++ P + AS + D I LW+ TG L+ T
Sbjct: 1064 LDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQT 1123
Query: 164 YRAY-DAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQ 221
D VD SVAF+P G ++ +GY + +++++D G E TL+G+ +
Sbjct: 1124 LTGRSDWVD------SVAFSPDGKQLASGYYDSTIKLWD-SATG---ELLQTLEGHSDR- 1172
Query: 222 AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281
+ ++ FSP +LA GSY QT+ ++ ELL + G V V FS DG L
Sbjct: 1173 ---IQSVVFSPDGK-LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLA 1228
Query: 282 TGGRKDPYILCWD 294
+ + I WD
Sbjct: 1229 SSSYGET-IKLWD 1240
Score = 153 (58.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 56/204 (27%), Positives = 94/204 (46%)
Query: 171 DEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIA 229
D + +VAF+P ++ + + +++++D G E TL+G+ +G + ++
Sbjct: 1042 DHSRSVHAVAFSPDDKQLASSSLDSTIKLWD-SATG---ELQRTLEGHSQG----VRSVT 1093
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP +LA SY T ++ EL L G+ V V FS DG L G D
Sbjct: 1094 FSPDGK-LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQL-ASGYYDST 1151
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
I WD +++ L S+ Q ++F P G+ L +G D ++D TG+ +
Sbjct: 1152 IKLWDSATG-ELLQTLEGHSDRI-QSVVFS--PDGKLLASGSYDQTAKLWDPATGELLQI 1207
Query: 350 FQAAADTVNGFSFHPFLPMAASSS 373
F+ + V +F P + ASSS
Sbjct: 1208 FEGHSKWVESVAFSPDGKLLASSS 1231
Score = 138 (53.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 178 SVAFNPTGTKIFAGYN-KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
+VAF+P G + +G + +++++D+ S L+ + E + + A+AFSP
Sbjct: 1007 AVAFSPDGKHLVSGSDDNTIKLWDLAT--------SELQQSLEDHSRSVHAVAFSPDDK- 1057
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
LA S T ++ EL L G GV V FS DG L + D I W+
Sbjct: 1058 QLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSY-DGTIKLWNPL 1116
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
++ L S+ + + F P G+ L +G D + ++D TG+ + + +D
Sbjct: 1117 TG-ELQQTLTGRSDWVDS-VAFS--PDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDR 1172
Query: 357 VNGFSFHPFLPMAASSS 373
+ F P + AS S
Sbjct: 1173 IQSVVFSPDGKLLASGS 1189
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 66/249 (26%), Positives = 107/249 (42%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPEN-------GISYDVNACSLAKD-----QDSYEAS 113
+ +SPD +SS D T++++ G S V + + + D +SY+ +
Sbjct: 1050 VAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGT 1109
Query: 114 LVVTE---GESVYDFC----WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA 166
+ + GE W ++ S P AS D I LWD+ TG L T
Sbjct: 1110 IKLWNPLTGELQQTLTGRSDWVDSVAFS-PDGKQLASGYYDSTIKLWDSATGELLQTLEG 1168
Query: 167 YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIM 225
+ D I SV F+P G + +G Y+++ +++D G + + EG + +
Sbjct: 1169 HS--DRIQ---SVVFSPDGKLLASGSYDQTAKLWDP-ATGELLQIF-------EGHSKWV 1215
Query: 226 SAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGR 285
++AFSP +LA SY +T ++ ELL L+ + V FS DGN L +
Sbjct: 1216 ESVAFSPDGK-LLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDI 1274
Query: 286 KDPYILCWD 294
D I WD
Sbjct: 1275 FDTKI--WD 1281
Score = 121 (47.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 178 SVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT 235
SV F+P G K+ A Y+ ++++++ G E TL G + + ++AFSP
Sbjct: 1091 SVTFSPDG-KLLASNSYDGTIKLWNP-LTG---ELQQTLTGRSDW----VDSVAFSPDGK 1141
Query: 236 GMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA G Y T ++ ELL L G + V FS DG L +G D WD
Sbjct: 1142 -QLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSY-DQTAKLWD- 1198
Query: 296 RKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAAD 355
A + +++ + + F P G+ L + + ++D TG+ + +
Sbjct: 1199 -PATGELLQIFEGHSKWVESVAFS--PDGKLLASSSYGETIKLWDPVTGELLQTLNDPDE 1255
Query: 356 TVNGFSFHP 364
+ +F P
Sbjct: 1256 SAGSVAFSP 1264
Score = 57 (25.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++K + +SPDG + SE T+++++ P G
Sbjct: 918 SGWVKSVAFSPDGKKLASGSEKNTVKLWN-PATG 950
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 151 (58.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 60/240 (25%), Positives = 110/240 (45%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +WD ++G T + + F FNP I +G +++SV
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 153
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV + G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 154 RIWDV-KTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 203
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTCHKNEKY 260
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D LV+I++LQT + + Q D V + HP + AS++
Sbjct: 261 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQ 272
TLK G +S++ FSP LA S + I+ + + + G + G++ V
Sbjct: 36 TLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 273 FSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQ 332
+S D N L + D + WD+ + K + H+N + P + +G
Sbjct: 95 WSSDSNLLVSAS-DDKTLKIWDVSSGKCL--KTLKG--HSNYVFCCNFNPQSNLIVSGSF 149
Query: 333 DGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
D V I+D++TGK + A +D V+ F+ + SSS
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 190
Score = 56 (24.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 17 SDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL 76
S T+ T ++ NQ + P V P+ T F T ++ + +K+SP+G
Sbjct: 13 SKTQSTPSSSNNQSK---PA---PVKPNYTLKFTLAGHTKAVSS-----VKFSPNGEWLA 61
Query: 77 TSSEDKTLRIF 87
+SS DK ++I+
Sbjct: 62 SSSADKLIKIW 72
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 152 (58.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 60/240 (25%), Positives = 110/240 (45%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +WD ++G T + + F FNP I +G +++SV
Sbjct: 73 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 127
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV + G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 128 RIWDV-KTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 177
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 178 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTGHKNEKY 234
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D LV+I++LQT + + Q D V + HP + AS++
Sbjct: 235 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 294
Score = 51 (23.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SP+G +SS DK ++I+
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIW 46
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 139 (54.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 41/156 (26%), Positives = 67/156 (42%)
Query: 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
++A++FS + G ++ E L G + +T + S DG+YL T G
Sbjct: 183 ITAVSFSDA-ADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 285 RKDPYILCWDLRK-AVQV-VYKLYRSSEHTNQRILFDIE--PSGRHLGTGGQDGLVHIYD 340
D + WD+R A Q K++ +H ++ L P G + G D +VHI+D
Sbjct: 242 M-DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Query: 341 LQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHR 376
+ + I +VN FHP P+ S S +
Sbjct: 301 TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Score = 68 (29.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 174 TAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNK 218
+A +++ FNP GT I +G +++ + ++ VH G D + + LKG+K
Sbjct: 54 SAVYTMKFNPAGTLIASGSHDREIFLWRVH--G-DCKNFMVLKGHK 96
Score = 62 (26.9 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
N + + W+ DGS +++S DKT+R + + E G
Sbjct: 97 NAILDLHWTSDGSQIVSASPDKTVRAWDV-ETG 128
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 50/197 (25%), Positives = 90/197 (45%)
Query: 179 VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML 238
V F+ G + G N+S +++DV G+ + + K+G I S + FSP L
Sbjct: 287 VNFSNDGKYLATGCNRSAQIYDVDT-GKKVHAFVD-ESEKDGDLYIRS-VCFSPDGN-YL 342
Query: 239 AIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG-GRKDPYILCWDLRK 297
A G+ +T ++ ++ + +G E + + +S DG ++ +G G K I WD+ K
Sbjct: 343 ATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKI--WDIEK 400
Query: 298 AVQVVYKLYRSSEHTNQRIL-FDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ + L + + P GR + G D +V ++D QTG ++ ++ D+
Sbjct: 401 G-KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDS 459
Query: 357 VNGFSFHPFLPMAASSS 373
V +F P AS S
Sbjct: 460 VYSVAFSPDGKSLASGS 476
Score = 119 (46.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191
A P + A+ + D+ + LWDA TG Y + +D + +SVAF+P G + +G
Sbjct: 422 AMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH--LDSV---YSVAFSPDGKSLASGS 476
Query: 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251
+KS++++D+ +T G+K+ + ++AFSP + +++ GS ++ +
Sbjct: 477 LDKSLKLWDLSGSRSRSRCRATFNGHKD----FVLSVAFSPDGSWLIS-GSKDRSVQFWD 531
Query: 252 EDNMELLYVLHGQEGGVTHVQFSRDGN 278
N +L G + V V S N
Sbjct: 532 PRNGTTHMMLQGHKNSVISVALSPKNN 558
Score = 66 (28.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY 96
+++ + +SPDG+ T +EDKT++++ + I +
Sbjct: 329 YIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQH 363
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 152 (58.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 60/240 (25%), Positives = 110/240 (45%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +WD ++G T + + F FNP I +G +++SV
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 153
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV + G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 154 RIWDV-KTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 203
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTGHKNEKY 260
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D LV+I++LQT + + Q D V + HP + AS++
Sbjct: 261 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 51 (23.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SP+G +SS DK ++I+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 152 (58.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 60/240 (25%), Positives = 110/240 (45%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +WD ++G T + + F FNP I +G +++SV
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 153
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV + G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 154 RIWDV-KTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 203
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTGHKNEKY 260
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D LV+I++LQT + + Q D V + HP + AS++
Sbjct: 261 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 51 (23.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SP+G +SS DK ++I+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 152 (58.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 60/240 (25%), Positives = 110/240 (45%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +WD ++G T + + F FNP I +G +++SV
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 153
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV + G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 154 RIWDV-KTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 203
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTGHKNEKY 260
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D LV+I++LQT + + Q D V + HP + AS++
Sbjct: 261 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 51 (23.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SP+G +SS DK ++I+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIW 72
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 152 (58.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 60/240 (25%), Positives = 110/240 (45%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +WD ++G T + + F FNP I +G +++SV
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 153
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV + G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 154 RIWDV-KTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 203
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTGHKNEKY 260
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D LV+I++LQT + + Q D V + HP + AS++
Sbjct: 261 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 51 (23.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SP+G +SS DK ++I+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIW 72
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 152 (58.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 60/240 (25%), Positives = 110/240 (45%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +WD ++G T + + F FNP I +G +++SV
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 153
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV + G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 154 RIWDV-KTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 203
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTGHKNEKY 260
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D LV+I++LQT + + Q D V + HP + AS++
Sbjct: 261 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 51 (23.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SP+G +SS DK ++I+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIW 72
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 70/278 (25%), Positives = 119/278 (42%)
Query: 36 LIRFDVPPH-RTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGI 94
L+ + + PH R Y + + + +++SP G+ ++S D+T+R++ L G
Sbjct: 42 LMLWSLKPHARAYRYVGH-------KDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGK 94
Query: 95 SYDVNACSL-AKDQD-SYEASLVVTEGE----------------SVYDFCWFPHMSASDP 136
S + A + + D S + L+VT E S+Y + + P
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP 154
Query: 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKS 195
+ S + D I +WD T +C D+V A F V FNP GT I AG + +
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNK--QCVNNFSDSVG--FANF-VDFNPNGTCIASAGSDHA 209
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
V+++D+ R + + Y G+ + ++F P ++ S + +
Sbjct: 210 VKIWDI-RMNKLLQHYQV------HSCGV-NCLSFHPLGNSLVTASSDGTVKMLDLIEG- 260
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293
L+Y L G G V V FS+DG L +GG D +L W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELLTSGGA-DAQVLIW 297
Score = 143 (55.4 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 66/243 (27%), Positives = 99/243 (40%)
Query: 137 TSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN 193
TS F+ + WD L L+ RAY V S+ F+P G + A +
Sbjct: 22 TSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRD 81
Query: 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253
++VR++ + R G K S K + A + S + FS +L S ++ ++
Sbjct: 82 RTVRLWVLDRKG----KSSEFKAHT---APVRS-VDFSADGQ-LLVTASEDKSIKVWSMF 132
Query: 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTN 313
LY L+ V +FS DG L +D I WD Q V S N
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFAN 190
Query: 314 QRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPF--LPMAAS 371
D P+G + + G D V I+D++ K + +Q + VN SFHP + AS
Sbjct: 191 ---FVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTAS 247
Query: 372 SSG 374
S G
Sbjct: 248 SDG 250
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 61/214 (28%), Positives = 91/214 (42%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY V SV F+P G + A +++VR++ + G K+S K + A
Sbjct: 10 RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG----KFSEFKAHT---AP 62
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S + FS LA S ++ ++ LY L+ V +FS DG L
Sbjct: 63 VRS-VDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVS 119
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+D I WD Q V S N D PSG + + G D V ++D++
Sbjct: 120 CSEDKTIKIWDTTNK-QCVNNFSDSVGFAN---FVDFNPSGTCIASAGSDQTVKVWDVRV 175
Query: 344 GKWISGFQAAADTVNGFSFHP---FLPMAASSSG 374
K + +Q + VN SFHP +L + ASS G
Sbjct: 176 NKLLQHYQVHSGGVNCISFHPSGNYL-ITASSDG 208
Score = 139 (54.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180
S+Y + + P + S + D I +WD T +C D+V A F V
Sbjct: 97 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK--QCVNNFSDSVG--FANF-VD 151
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
FNP+GT I AG +++V+V+DV R + + Y G G+ + I+F P+ ++
Sbjct: 152 FNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHSG------GV-NCISFHPSGNYLIT 203
Query: 240 IGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293
S + D +E L+Y L G G V V FS+ G L+ G D +L W
Sbjct: 204 ASSDGTLKIL---DLLEGRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLW 255
Score = 69 (29.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 37 IRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY 96
+R +P R +++F+ + P ++ + +S DG T+SEDK+++++S+ Y
Sbjct: 42 VRLWIPDKRGK--FSEFKAHTAP---VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLY 96
Query: 97 DV 98
+
Sbjct: 97 SL 98
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 143 (55.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 61/214 (28%), Positives = 91/214 (42%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY V SV F+P G + A +++VR++ + G K+S K + A
Sbjct: 52 RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG----KFSEFKAHT---AP 104
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S + FS LA S ++ ++ LY L+ V +FS DG L
Sbjct: 105 VRS-VDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVS 161
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+D I WD Q V S N D PSG + + G D V ++D++
Sbjct: 162 CSEDKTIKIWDTTNK-QCVNNFSDSVGFAN---FVDFNPSGTCIASAGSDQTVKVWDVRV 217
Query: 344 GKWISGFQAAADTVNGFSFHP---FLPMAASSSG 374
K + +Q + VN SFHP +L + ASS G
Sbjct: 218 NKLLQHYQVHSGGVNCISFHPSGNYL-ITASSDG 250
Score = 139 (54.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180
S+Y + + P + S + D I +WD T +C D+V A F V
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK--QCVNNFSDSVG--FANF-VD 193
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
FNP+GT I AG +++V+V+DV R + + Y G G+ + I+F P+ ++
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHSG------GV-NCISFHPSGNYLIT 245
Query: 240 IGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293
S + D +E L+Y L G G V V FS+ G L+ G D +L W
Sbjct: 246 ASSDGTLKIL---DLLEGRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLW 297
Score = 69 (29.3 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 37 IRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY 96
+R +P R +++F+ + P ++ + +S DG T+SEDK+++++S+ Y
Sbjct: 84 VRLWIPDKRGK--FSEFKAHTAP---VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLY 138
Query: 97 DV 98
+
Sbjct: 139 SL 140
Score = 38 (18.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 69 SPDGSSFLTSSEDKTLRIFSLPENGISY 96
SP+G T+S D L +++ + +Y
Sbjct: 27 SPNGKQLATASWDTFLMLWNFKPHARAY 54
>DICTYBASE|DDB_G0278769 [details] [associations]
symbol:cstf1 "cleavage stimulation factor 50 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278769 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006378 GO:GO:0003723 EMBL:AAFI02000024
GO:GO:0006379 KO:K14406 OMA:TKFITTH RefSeq:XP_641951.1
ProteinModelPortal:Q54XS9 EnsemblProtists:DDB0233705 GeneID:8621683
KEGG:ddi:DDB_G0278769 InParanoid:Q54XS9 ProtClustDB:CLSZ2729098
Uniprot:Q54XS9
Length = 506
Score = 164 (62.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 80/345 (23%), Positives = 150/345 (43%)
Query: 48 HFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107
+F +F T+ N + K+S DG T S D ++++ + N + + N +
Sbjct: 159 NFITKFITTH--KNACRCAKFSWDGKYVATGSSDTSIKLLDV--NKMR-NYNQTKNETTE 213
Query: 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
DS + V+ + YD + P++ + +S ++D I +D + L R ++
Sbjct: 214 DSAPSRPVI---RTFYDHTMPINDLDFHPSAPILSSASKDGTIRFYDYKSSLKR----SF 266
Query: 168 DAVDEITAAFSVAFNPTGTKIFAGYN-KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ + S+ F+P G I AG + + +R+++V+ F+ ++ K N E G ++
Sbjct: 267 KYIQDTHGIRSINFHPCGDLILAGTDHQMIRLYNVNT----FQSFTARKIN-EHHHGPIN 321
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGV--THVQFSRDGNYLYTGG 284
+ FS + A S T I+ +N L+ L+ GG T VQ SR+ YL + G
Sbjct: 322 QVRFS-LDGNIFASCSKDNTIKIWDSNNFSLISTLNSPHGGKEPTTVQISRNQKYLLSCG 380
Query: 285 RKDPYILCWDLRKAVQVVYKLY----RSSEHTNQRILFDIEPSGRHLGTGG-QDGLVHIY 339
R D I W++ +++Y + +S RI + ++ T Q + +Y
Sbjct: 381 R-DSMIKLWEITSG-RLIYSINTGVNQSGGQNKNRISATFNYTEDYIITNDEQPSVAVVY 438
Query: 340 DLQTGKWISGFQAAADTVNGFSFHPFL-PMAASSSGHR-RFPVDD 382
+ +T + + +TV + P + S HR RF DD
Sbjct: 439 NSRTKEQVQKLTGHNNTVRYIAASPVENALMTCSLDHRGRFWTDD 483
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 159 (61.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 65/249 (26%), Positives = 105/249 (42%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+ +SP G + S DKT+RI+ G S + + ++ + L+VT +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 124 DFCWFPHM----------------SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H + P + S + D + LWD T+ C +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYC 184
Query: 168 DAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ +T V F+P+GT I A G + +V+V+D R R + Y + ++
Sbjct: 185 EHGGFVTY---VDFHPSGTCIAAAGMDNTVKVWDT-RTHRLVQHYQL-------HSAAVN 233
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
A++F P+ ++ S S + D ME LLY LHG +G T V FSR G Y +GG
Sbjct: 234 ALSFHPSGNYLITASSDSTLKIL---DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 291 -SDEQVMVW 298
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 61/246 (24%), Positives = 103/246 (41%)
Query: 135 DPTSCV-FASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191
D +CV F+ T+ D+T + ++ RAY A V F+P+G + +G
Sbjct: 20 DAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASG 79
Query: 192 Y-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250
+K+VR++ + G ST+ + ++ F + +L S +T ++
Sbjct: 80 SRDKTVRIWVPNVKGE-----STVF---RAHTATVRSVHFC-SDGQLLVTASDDKTVKVW 130
Query: 251 REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE 310
L+ L V +FS DG L D + WD + + + V+ Y E
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGR-LIVSASDDKTVKLWD-KTSRECVHS-Y--CE 185
Query: 311 HTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHP---FLP 367
H D PSG + G D V ++D +T + + +Q + VN SFHP +L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 368 MAASSS 373
A+S S
Sbjct: 246 TASSDS 251
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 157 (60.3 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 66/247 (26%), Positives = 119/247 (48%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191
+SD + V AS D + +WD +G T + + D + F FNP I +G
Sbjct: 90 SSDSSRLVSASD--DKTLKVWDMRSGKCLKTLKGHS--DFV---FCCDFNPPSNLIVSGS 142
Query: 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251
+++SV++++V + G+ + TL + + +SA+ F+ + ++ GSY I+
Sbjct: 143 FDESVKIWEV-KTGKCLK---TLSAHSDP----ISAVNFN-CNGSLIVSGSYDGLCRIWD 193
Query: 252 EDNMELLYVLHGQEGG--VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSS 309
+ + L L EG V+ V+FS +G Y+ T D + WD + + K Y
Sbjct: 194 AASGQCLRTL-ADEGNPPVSFVKFSPNGKYILTA-TLDNTLKLWDYSRGRCL--KTYTG- 248
Query: 310 EHTNQRI-LF-DIEPSGRH-LGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFL 366
H N++ LF +GR + +G +D +V+I++LQT + + Q D V + HP
Sbjct: 249 -HKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTK 307
Query: 367 PMAASSS 373
+ AS++
Sbjct: 308 NIIASAA 314
Score = 41 (19.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGES 121
+ +K+SP+G +S+ D + I+ +YD N C S E S V +S
Sbjct: 42 ISSVKFSPNGEWLASSAADALIIIWG------AYDGN-CKKTLYGHSLEISDVAWSSDS 93
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 164 (62.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 47/171 (27%), Positives = 76/171 (44%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G + I F+ + ++A GS S + ++ + ++L L G + ++ + F G Y
Sbjct: 61 GHTSAVGCIQFNSSEERVVA-GSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEY 119
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L +G D I WD+R+ V +R HT P G+ L + D V ++
Sbjct: 120 LASGS-VDSNIKLWDVRRKGCV----FRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLW 174
Query: 340 DLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSG 390
DL GK I+ F + VN FHP + AS S R + D E ++ G
Sbjct: 175 DLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIG 225
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 75/290 (25%), Positives = 123/290 (42%)
Query: 105 KDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTY 164
K +D++ L EG S D W ++ S P + AS + D I LWD +G L+ T
Sbjct: 25 KVEDNWGPELQTLEGHS--D--WIETVTFS-PDGRLLASGSNDTTIKLWDPASGGLKQTL 79
Query: 165 RAYDAVDEITAAFS-----VAFNPTGT--KIFAGYNKSVR-VFDVHRPGRDFEKYS---- 212
+ + + + AFS +A + T K++ + S++ + H + +S
Sbjct: 80 EGHSSSVQ-SVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ 138
Query: 213 -------TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265
+LK EG + + ++AFSP +LA GS +T ++ L + L G
Sbjct: 139 LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQ-LLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE-HTNQRILFDIEPSG 324
V + FS DG L +G D I WD L + E H+N+ P+G
Sbjct: 198 NWVLPLVFSPDGRLLASGSN-DATIKLWDPPSG-----SLKHTLEGHSNKIESLAFSPNG 251
Query: 325 RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSG 374
+ L +G D + ++D TG + + +D V F P + S SG
Sbjct: 252 QLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSG 301
Score = 134 (52.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 64/295 (21%), Positives = 121/295 (41%)
Query: 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS-LVVTE 118
+++++ + +SPDG + S D T++++ G+ + S + ++ + ++
Sbjct: 41 SDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLAS 100
Query: 119 GESVYDF-CWFPHMSASDPTSCVFAS-TTRDHPI------HLWDATTGLLRCTYRAYDAV 170
G S W SASD + R + LW+ G L+ T +
Sbjct: 101 GSSDTTIKLW---NSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHS-- 155
Query: 171 DEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIA 229
D + SVAF+P G + +G K+++++D G LK G + + +
Sbjct: 156 DWV---LSVAFSPDGQLLASGSAEKTIKLWDSATCG--------LKHTLGGHSNWVLPLV 204
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP +LA GS T ++ + L + L G + + FS +G L +G D
Sbjct: 205 FSPDGR-LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGS-SDAT 262
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTG 344
I WD ++ + H++ + P + L +G D + ++D TG
Sbjct: 263 IKLWDTATGS---FR-HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG 313
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 145 (56.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 57/243 (23%), Positives = 111/243 (45%)
Query: 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192
S + CV S + D + +++ T + T + ++ F FNP + + +G +
Sbjct: 138 SSDSRCV-VSASDDKTLKIFEIVTSRMTKTLKGHN-----NYVFCCNFNPQSSLVVSGSF 191
Query: 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252
++SVR++DV + G + TL + + +SA++F+ + ++A GSY I+
Sbjct: 192 DESVRIWDV-KTGMCIK---TLPAHSDP----VSAVSFNRDGS-LIASGSYDGLVRIWDT 242
Query: 253 DNMELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEH 311
N + + L E V V+FS +G Y+ D + WD K + K Y E+
Sbjct: 243 ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNL-DSTLKLWDFSKGKTL--KQYTGHEN 299
Query: 312 TNQRILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAA 370
+ I + +G + + +G +D ++I++LQT + + + V HP + A
Sbjct: 300 SKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIA 359
Query: 371 SSS 373
S +
Sbjct: 360 SGA 362
Score = 54 (24.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSL 89
+ K+SP G TSS DKT++I+++
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNM 116
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 145 (56.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 57/243 (23%), Positives = 111/243 (45%)
Query: 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192
S + CV S + D + +++ T + T + ++ F FNP + + +G +
Sbjct: 138 SSDSRCV-VSASDDKTLKIFEIVTSRMTKTLKGHN-----NYVFCCNFNPQSSLVVSGSF 191
Query: 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252
++SVR++DV + G + TL + + +SA++F+ + ++A GSY I+
Sbjct: 192 DESVRIWDV-KTGMCIK---TLPAHSDP----VSAVSFNRDGS-LIASGSYDGLVRIWDT 242
Query: 253 DNMELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEH 311
N + + L E V V+FS +G Y+ D + WD K + K Y E+
Sbjct: 243 ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNL-DSTLKLWDFSKGKTL--KQYTGHEN 299
Query: 312 TNQRILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAA 370
+ I + +G + + +G +D ++I++LQT + + + V HP + A
Sbjct: 300 SKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIA 359
Query: 371 SSS 373
S +
Sbjct: 360 SGA 362
Score = 54 (24.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSL 89
+ K+SP G TSS DKT++I+++
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNM 116
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 67/249 (26%), Positives = 105/249 (42%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+ +SP G + S DKT+RI+ G S + + ++ + VT +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 124 DFCWFPH-----MSASD-----------PTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H S S P + S + D + LWD T+ C +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYC 184
Query: 168 DAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ +T V F+P+GT I A G + +V+V+DV R R + Y + ++
Sbjct: 185 EHGGFVTY---VDFHPSGTCIAAAGMDNTVKVWDV-RTHRLLQHYQL-------HSAAVN 233
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
A++F P+ ++ S S + D ME LLY LHG +G T V FSR G Y +GG
Sbjct: 234 ALSFHPSGNYLVTASSDSTLKIL---DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 291 -SDEQVMVW 298
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/213 (26%), Positives = 92/213 (43%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY A V F+P+G + +G +K+VR++ + G ST+ + A
Sbjct: 53 RAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-----STVF--RAHTAT 105
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S S + + A S +T ++ + L+ L V +FS DG L
Sbjct: 106 VRSVHFCSDGQSFVTA--SDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVS 162
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
D + WD + + + V+ Y EH D PSG + G D V ++D++T
Sbjct: 163 ASDDKTVKLWD-KTSRECVHS-Y--CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 344 GKWISGFQAAADTVNGFSFHP---FLPMAASSS 373
+ + +Q + VN SFHP +L A+S S
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 251
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 63/250 (25%), Positives = 110/250 (44%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGE 120
+ G+ ++P GS +SS D+T+R+++ G S + + S+ S + +VT +
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASD 122
Query: 121 SVYDFCW----------------FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTY 164
W + + P + AS D + LWD ++ +
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIF 182
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
Y +A F V FN +GT I + G + +++++D+ R + + Y K AG
Sbjct: 183 TDYGG----SATF-VDFNSSGTCIASSGADNTIKIWDI-RTNKLIQHY------KVHNAG 230
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ + +F P+ +++ GS T I L+Y LHG +G V V FSRDG+ L+
Sbjct: 231 V-NCFSFHPSGNYLIS-GSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGD-LFAS 287
Query: 284 GRKDPYILCW 293
G D +L W
Sbjct: 288 GGADSQVLMW 297
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/233 (23%), Positives = 98/233 (42%)
Query: 163 TYRAYDAVDEITAAFSVAFNPTGTK-----IFAGYNKSVRVFDVHRPGRDFEKYSTLKGN 217
T RAY + + + +V G K + G + V ++ + +P Y G+
Sbjct: 3 TKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY----GH 58
Query: 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277
G + ++ F + ++A G+ S T ++ + +++ L G V F G
Sbjct: 59 SSG----IDSVTFDASEV-LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 278 NYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVH 337
+ + G D + WD+RK + Y+ HT + P GR + +GG+D +V
Sbjct: 114 EF-FASGSLDTNLKIWDIRKKGCI--HTYKG--HTRGVNVLRFTPDGRWVVSGGEDNIVK 168
Query: 338 IYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSG 390
++DL GK ++ F++ + FHP + A+ S R D E L G
Sbjct: 169 VWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIG 221
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 146 (56.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 60/240 (25%), Positives = 111/240 (46%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196
S + S + D + +W+ +TG T + + F FNP I +G +++SV
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESV 180
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNM 255
R++DV R G+ + TL + + +SA+ F+ G L + S Y I+ +
Sbjct: 181 RIWDV-RTGKCLK---TLPAHSDP----VSAVHFN--RDGSLIVSSSYDGLCRIWDTASG 230
Query: 256 ELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ L L + V+ V+FS +G Y+ D + WD K + K Y ++
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCL--KTYTGHKNEKY 287
Query: 315 RILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
I + +G + + +G +D +V+I++LQ+ + + Q DTV + HP + AS++
Sbjct: 288 CIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAA 347
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 42/161 (26%), Positives = 70/161 (43%)
Query: 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQ 272
TLK G +SA+ FSP LA S + I+ + + + G + G++ V
Sbjct: 63 TLKFTLAGHTKAVSAVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 121
Query: 273 FSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQ 332
+S D L +G D + W+L + K + H+N + P + +G
Sbjct: 122 WSSDSRLLVSGS-DDKTLKVWELSTGKSL--KTLKG--HSNYVFCCNFNPQSNLIVSGSF 176
Query: 333 DGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
D V I+D++TGK + A +D V+ F+ + SSS
Sbjct: 177 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 217
Score = 51 (23.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIF 87
+ +K+SP+G +SS DK ++I+
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIW 99
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 67/249 (26%), Positives = 105/249 (42%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+ +SP G + S DKT+RI+ G S + + ++ + +VT +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 124 DFCWFPH-----MSASD-----------PTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H S S P + S + D + LWD T+ C +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYC 184
Query: 168 DAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ +T V F+P+GT I A + +V+V+DV R R + Y + ++
Sbjct: 185 EHGGFVTY---VDFHPSGTCIAAASMDNTVKVWDV-RTHRLLQHYQL-------HSAAVN 233
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
A++F P+ +L S S + D ME LLY LHG +G T V FSR G Y +GG
Sbjct: 234 ALSFHPSGNYLLTASSDSTLKIL---DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 291 -SDEQVMVW 298
Score = 126 (49.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 55/213 (25%), Positives = 90/213 (42%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY A V F+P+G + +G +K+VR++ + G ST+ + A
Sbjct: 53 RAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGE-----STVF--RAHTAT 105
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S S + L S +T ++ + L+ L V +FS DG L
Sbjct: 106 VRSVHFCSDGQS--LVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGR-LIVS 162
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
D + WD + + + V+ Y EH D PSG + D V ++D++T
Sbjct: 163 ASDDKTVKLWD-KTSRECVHS-Y--CEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRT 218
Query: 344 GKWISGFQAAADTVNGFSFHP---FLPMAASSS 373
+ + +Q + VN SFHP +L A+S S
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLLTASSDS 251
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 66/249 (26%), Positives = 105/249 (42%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+ +SP G + S DKT+RI+ G S + + ++ + VT +
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 124 DFCWFPH-----MSASD-----------PTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H S S P + S + D + LWD T+ C +
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYC 215
Query: 168 DAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ +T V F+P+GT + A G + +V+V+DV R R + Y + ++
Sbjct: 216 EHGGFVTY---VDFHPSGTCVAAAGMDNTVKVWDV-RTHRLLQHYQL-------HSAAVN 264
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
A++F P+ ++ S S + D ME LLY LHG +G T V FSR G Y +GG
Sbjct: 265 ALSFHPSGNYLVTASSDSTLKIL---DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 321
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 322 -SDEQVMVW 329
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 56/213 (26%), Positives = 92/213 (43%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY A V F+P+G + +G +K+VR++ + G ST+ + A
Sbjct: 84 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGE-----STVF--RAHTAT 136
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S S + + A S +T ++ + L+ L V +FS DG L
Sbjct: 137 VRSVHFCSDGQSFVTA--SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVS 193
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
D + WD + + + V+ Y EH D PSG + G D V ++D++T
Sbjct: 194 ASDDKTVKLWD-KTSRECVHS-Y--CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRT 249
Query: 344 GKWISGFQAAADTVNGFSFHP---FLPMAASSS 373
+ + +Q + VN SFHP +L A+S S
Sbjct: 250 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 282
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 64/249 (25%), Positives = 104/249 (41%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+ +SP G + S DKT+RI+ G S + + ++ + +VT +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 124 DFCWFPHM----------------SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H + P + S + D + LWD T+ C +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR--ECIHSYC 184
Query: 168 DAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ +T V F+P+GT I A G + +V+V+D R R + Y + ++
Sbjct: 185 EHGGFVTY---VDFHPSGTCIAAAGMDNTVKVWDA-RTHRLLQHYQL-------HSAAVN 233
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
A++F P+ ++ S S + D ME LLY LHG +G T V FSR G Y +GG
Sbjct: 234 ALSFHPSGNYLITASSDSTLKIL---DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 291 -SDEQVMVW 298
Score = 134 (52.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 62/246 (25%), Positives = 103/246 (41%)
Query: 135 DPTSCV-FASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191
D +CV F+ T+ D+T + ++ RAY A V F+P+G + +G
Sbjct: 20 DAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASG 79
Query: 192 Y-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250
+K+VR++ + G ST+ + A + S S + L S +T ++
Sbjct: 80 SRDKTVRIWVPNVKGE-----STVF--RAHTATVRSVHFCSDGQS--LVTASDDKTVKVW 130
Query: 251 REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE 310
L+ L V +FS DG L D + WD + + + ++ Y E
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGR-LIVSASDDKTVKLWD-KTSRECIHS-Y--CE 185
Query: 311 HTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHP---FLP 367
H D PSG + G D V ++D +T + + +Q + VN SFHP +L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 368 MAASSS 373
A+S S
Sbjct: 246 TASSDS 251
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 163 (62.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 54/233 (23%), Positives = 98/233 (42%)
Query: 163 TYRAYDAVDEITAAFSVAFNPTGTK-----IFAGYNKSVRVFDVHRPGRDFEKYSTLKGN 217
T RAY + + + +V G K + G + V ++ + +P Y G+
Sbjct: 3 TKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY----GH 58
Query: 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277
G + ++ F + G++A G+ S T ++ + +++ L G V F G
Sbjct: 59 SSG----IDSVTFDASE-GLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 278 NYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVH 337
+ + G D + WD+RK + Y+ HT + P GR + +GG+D +V
Sbjct: 114 EF-FASGSLDTNLKIWDIRKKGCI--HTYKG--HTRGVNVLRFTPDGRWIVSGGEDNVVK 168
Query: 338 IYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSG 390
++DL GK + F++ + FHP + A+ S + D E L G
Sbjct: 169 VWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIG 221
Score = 39 (18.8 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 386 LHLSGDENCVSVW 398
L S ++NCV VW
Sbjct: 282 LGCSYNQNCVGVW 294
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 150 (57.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 64/249 (25%), Positives = 108/249 (43%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+++SP G + S DKT+ ++ G S + + ++ S + +VT +
Sbjct: 68 VQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 124 DFCWFPH-----MSASD-----------PTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H S S P + AS + D + LWD T+ C +
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSR--ECIH--- 182
Query: 168 DAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ A V F+P+GT I A G +K+V+V+DV R R + Y ++
Sbjct: 183 SFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDV-RMNRLLQHYQV-------HTAAVN 234
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
+++F P+ ++ + S + D +E LLY LHG +G T V FSR G++ +GG
Sbjct: 235 SLSFHPSGNYLITASNDSTLKIL---DLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGG 291
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 292 -SDEQVMVW 299
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 48/201 (23%), Positives = 82/201 (40%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY V A V F+P+G + +G +K+V ++ G ST+ K A
Sbjct: 54 RAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGE-----STVF--KAHTAT 106
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S + FS ++ S +T ++ + L+ L V +FS DG L
Sbjct: 107 VRS-VHFSSDGQSLVT-ASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGR-LIAS 163
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
D + WD + + + ++ N + PSG + G D V ++D++
Sbjct: 164 ASDDKTVKLWD-KTSRECIHSFCEHGGFANH---VEFHPSGTCIAAAGTDKTVKVWDVRM 219
Query: 344 GKWISGFQAAADTVNGFSFHP 364
+ + +Q VN SFHP
Sbjct: 220 NRLLQHYQVHTAAVNSLSFHP 240
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 151 (58.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 65/249 (26%), Positives = 104/249 (41%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+ +SP G + S DKT+RI+ G S + + ++ + VT +
Sbjct: 29 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 88
Query: 124 DFCWFPH-----MSASD-----------PTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H S S P + S + D + LWD ++ C +
Sbjct: 89 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR--ECVHSYC 146
Query: 168 DAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ +T V F+P+GT I A G + +V+V+DV R R + Y + ++
Sbjct: 147 EHGGFVTY---VDFHPSGTCIAAAGMDNTVKVWDV-RTHRLLQHYQL-------HSAAVN 195
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
++F P+ ++ S S + D ME LLY LHG +G T V FSR G Y +GG
Sbjct: 196 GLSFHPSGNYLITASSDSTLKIL---DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 252
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 253 -SDEQVMVW 260
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 57/213 (26%), Positives = 93/213 (43%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY A V F+P+G + +G +K+VR++ + G ST+ + A
Sbjct: 15 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-----STVF--RAHTAT 67
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S S + + A S +T ++ + L+ L V +FS DG L
Sbjct: 68 VRSVHFCSDGQSFVTA--SDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVS 124
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
D + WD + + + V+ Y EH D PSG + G D V ++D++T
Sbjct: 125 ASDDKTVKLWD-KSSRECVHS-Y--CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180
Query: 344 GKWISGFQAAADTVNGFSFHP---FLPMAASSS 373
+ + +Q + VNG SFHP +L A+S S
Sbjct: 181 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS 213
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 151 (58.2 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 71/281 (25%), Positives = 122/281 (43%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSL-AKDQD-SYEASLVVTEGE 120
+ +++SP G+ ++S D+T+R++ + G S + A + + D S + + + E
Sbjct: 63 ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASE 122
Query: 121 ----------------SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTY 164
S+Y + + P + S + D I +WD T +C
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK--QCVN 180
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
D V A F VAFNP GT I AG + +V+++D+ R + + Y G G
Sbjct: 181 NFSDFVG--FANF-VAFNPNGTCIASAGSDHTVKIWDI-RVNKLLQHYQVHSG------G 230
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLY 281
+ + ++F P+ ++ S + D +E L+Y L G G V V FS+ G L+
Sbjct: 231 V-NCVSFHPSGNYLITASSDGTLKIL---DLLEGRLIYTLQGHTGPVFTVSFSKGGE-LF 285
Query: 282 TGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEP 322
T G D +L W ++ YK S+ +R+ FD P
Sbjct: 286 TSGGADAQVLLWRTNFD-ELNYK--DVSKRNLKRLHFDSPP 323
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 65/244 (26%), Positives = 99/244 (40%)
Query: 137 TSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN 193
TS F+ + WD L LR RA+ V SV F+P G + A +
Sbjct: 22 TSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRD 81
Query: 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253
+++R++ + G K S K + A + S + FS LA S ++ ++
Sbjct: 82 RTIRLWIPDKRG----KSSEFKAHT---APVRS-VDFSADGQ-FLASASEDKSIKVWNMY 132
Query: 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTN 313
LY L+ V +FS DG L +D I WD Q V S+
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTNK-QCVNNF---SDFVG 187
Query: 314 QRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHP---FLPMAA 370
P+G + + G D V I+D++ K + +Q + VN SFHP +L + A
Sbjct: 188 FANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYL-ITA 246
Query: 371 SSSG 374
SS G
Sbjct: 247 SSDG 250
Score = 44 (20.5 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSL 89
+ + +SP+G T S D L ++SL
Sbjct: 21 ITSVDFSPNGKQLATGSWDTFLMLWSL 47
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 142 (55.0 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 59/206 (28%), Positives = 98/206 (47%)
Query: 141 FA-STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVF 199
FA S + D + LWD +TG+ + +D D ++ AFSV + A +++++++
Sbjct: 89 FALSGSWDGELRLWDLSTGVTTRRFVGHDK-DVLSVAFSVDNRQI---VSASRDRTIKLW 144
Query: 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP-THTGMLAIGSYSQTSAIYREDNMELL 258
+ + + L G EG G +S + FSP T + GS+ +T ++ N +L
Sbjct: 145 NTLGECK-YTIGGDLGGG-EGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLR 202
Query: 259 YVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE-HTNQRIL 317
L G G V V S DG+ +GG KD L WDL + ++ Y L S H+ +
Sbjct: 203 CNLEGHGGYVNAVAVSPDGSLCASGG-KDGVTLLWDLAEGKRL-YSLDAGSIIHS---LC 257
Query: 318 FDIEPSGRHLGTGGQDGLVHIYDLQT 343
F P+ L QD + I+DL++
Sbjct: 258 FS--PNRYWLCAATQDS-IKIWDLES 280
Score = 48 (22.0 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGIS 95
FR + ++F++ + S DG L+ S D LR++ L G++
Sbjct: 68 FRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDL-STGVT 109
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 151 (58.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 65/249 (26%), Positives = 104/249 (41%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS--YDVNACSLAKDQDSYEASLVVTEGESVY 123
+ +SP G + S DKT+RI+ G S + + ++ + VT +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 124 DFCWFPH-----MSASD-----------PTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H S S P + S + D + LWD ++ C +
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR--ECVHSYC 184
Query: 168 DAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
+ +T V F+P+GT I A G + +V+V+DV R R + Y + ++
Sbjct: 185 EHGGFVTY---VDFHPSGTCIAAAGMDNTVKVWDV-RTHRLLQHYQL-------HSAAVN 233
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
++F P+ ++ S S + D ME LLY LHG +G T V FSR G Y +GG
Sbjct: 234 GLSFHPSGNYLITASSDSTLKIL---DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 291 -SDEQVMVW 298
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 63/246 (25%), Positives = 106/246 (43%)
Query: 135 DPTSCV-FASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191
D +CV F+ T+ D+ + ++ RAY A V F+P+G + +G
Sbjct: 20 DAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASG 79
Query: 192 Y-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250
+K+VR++ + G ST+ + A + S S + + A S +T ++
Sbjct: 80 SRDKTVRIWVPNVKGE-----STVF--RAHTATVRSVHFCSDGQSFVTA--SDDKTVKVW 130
Query: 251 REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE 310
+ L+ L V +FS DG L D + WD + + + V+ Y E
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWD-KSSRECVHS-Y--CE 185
Query: 311 HTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHP---FLP 367
H D PSG + G D V ++D++T + + +Q + VNG SFHP +L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 245
Query: 368 MAASSS 373
A+S S
Sbjct: 246 TASSDS 251
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 64/238 (26%), Positives = 101/238 (42%)
Query: 178 SVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
SVAF+P+ G +++++++DV K TL G+ E G+ A S HT
Sbjct: 181 SVAFDPSNEWFCTGSADRTIKIWDV---ATGVLKL-TLTGHIEQVRGL----AVSNRHTY 232
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
M + G Q E N +++ HG GV + + L TGGR D WD+R
Sbjct: 233 MFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLALHPTLDVLLTGGR-DSVCRVWDIR 290
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+Q+ + S H N P+ + TG D + +DL+ GK +S +
Sbjct: 291 TKMQI----FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKS 346
Query: 357 VNGFSFHPFLPMAASSSGH--RRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI 412
V + HP AS+S ++F + E H N +S + +M N DG+
Sbjct: 347 VRAMTLHPKENAFASASADNTKKFSLPKGEFCH-----NMLSQQKTIINAMAVNEDGV 399
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 140 (54.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 59/238 (24%), Positives = 104/238 (43%)
Query: 178 SVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
SVAF+P+ G +++++++DV LK G G + +A S HT
Sbjct: 175 SVAFDPSNEWFCTGSADRTIKIWDVAT--------GVLKLTLTGHIGQVRGLAVSNRHTY 226
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
M + G Q E N +++ HG GV + + + TGGR D WD+R
Sbjct: 227 MFSAGDDKQVKCWDLEQN-KVIRSYHGHLHGVYCLALHPTLDVVLTGGR-DSVCRVWDIR 284
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+Q+ + L S+ + +L P+ + TG D + +DL+ GK ++ T
Sbjct: 285 TKMQI-FVLPHDSDVFS--VL--ARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKT 339
Query: 357 VNGFSFHPFLP--MAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI 412
V + HP ++AS+ ++F + E H N +S+ + ++ N DG+
Sbjct: 340 VRAMALHPKENDFVSASADNIKKFSLPKGEFCH-----NMLSLQRDIINAVAVNEDGV 392
Score = 55 (24.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/74 (18%), Positives = 32/74 (43%)
Query: 16 YSDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF 75
+S+ ++ AA + WP + P + +R +++ + + P F
Sbjct: 133 FSERNLSTAALMERMPSRWPRPEWHAP-------WKNYRVLQGHLGWVRSVAFDPSNEWF 185
Query: 76 LTSSEDKTLRIFSL 89
T S D+T++I+ +
Sbjct: 186 CTGSADRTIKIWDV 199
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/195 (29%), Positives = 85/195 (43%)
Query: 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL 160
C L K + + A L EG S + W V AS + D + LWD TG L
Sbjct: 683 CQLPKVNEKWGAELQTLEGHS--NSVW-----------AVLASGSDDETVRLWDPATGSL 729
Query: 161 RCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219
+ T + SVAF+P G + +G ++K+VR++D P +L+
Sbjct: 730 QQTLEGHSGW-----VLSVAFSPDGRLLASGSFDKTVRLWD---PAT-----GSLQQTLR 776
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G + + ++AFSP +LA GS+ +T ++ L L G V V FS DG
Sbjct: 777 GHSNWVRSVAFSPDGR-LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRL 835
Query: 280 LYTGGRKDPYILCWD 294
L +G D + WD
Sbjct: 836 LASGSF-DKTVRLWD 849
Score = 150 (57.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 49/151 (32%), Positives = 78/151 (51%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191
A P + AS + D + LWD TG L+ T R + SVAF+P G + +G
Sbjct: 744 AFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHS-----NWVRSVAFSPDGRLLASGS 798
Query: 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251
++K+VR++D P TL+G+ + + ++AFSP +LA GS+ +T ++
Sbjct: 799 FDKTVRLWD---PATG-SLQQTLRGHSD----TVRSVAFSPDGR-LLASGSFDKTVRLWD 849
Query: 252 EDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
L L +G VT +QFS+DG+Y+ T
Sbjct: 850 PATGTLQQTLI-IKGTVTELQFSQDGSYIST 879
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQ 272
+L+ EG +G + ++AFSP +LA GS+ +T ++ L L G V V
Sbjct: 728 SLQQTLEGHSGWVLSVAFSPDGR-LLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVA 786
Query: 273 FSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQ 332
FS DG L +G D + WD A + + R T + + F P GR L +G
Sbjct: 787 FSPDGRLLASGSF-DKTVRLWD--PATGSLQQTLRGHSDTVRSVAFS--PDGRLLASGSF 841
Query: 333 DGLVHIYDLQTG 344
D V ++D TG
Sbjct: 842 DKTVRLWDPATG 853
Score = 129 (50.5 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 45/159 (28%), Positives = 68/159 (42%)
Query: 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274
K N++ A + + S + +LA GS +T ++ L L G G V V FS
Sbjct: 687 KVNEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFS 746
Query: 275 RDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDG 334
DG L +G D + WD A + + R + + + F P GR L +G D
Sbjct: 747 PDGRLLASGSF-DKTVRLWD--PATGSLQQTLRGHSNWVRSVAFS--PDGRLLASGSFDK 801
Query: 335 LVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
V ++D TG + +DTV +F P + AS S
Sbjct: 802 TVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGS 840
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 147 (56.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 53/251 (21%), Positives = 107/251 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVR 197
S +F+++T D + +WD+ TG R + + F P + +V+
Sbjct: 112 SLLFSAST-DKTVCVWDSETG--ERVKRLKGHTSFVNSCFPARRGPQ-LACTGSDDGTVK 167
Query: 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL 257
++D+ + T + + ++S + F+ T +++ G ++ +L
Sbjct: 168 LWDIRKKA----SVHTFQNTYQ----VLS-VTFNDTSDQIIS-GGIDNDIKVWDLRQNKL 217
Query: 258 LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQR 315
+Y + G VT + S DG+YL + D + WD+R + K+++ + H ++
Sbjct: 218 IYSMQGHGDSVTGLSLSADGSYLLSNSM-DNSVRVWDIRPFAPKERCVKIFQGNVHNFEK 276
Query: 316 ILFDIEPS--GRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
L S G + G D V+I+D T + + A +VN +FHP P+ S S
Sbjct: 277 NLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGS 336
Query: 374 GHRRFPVDDFE 384
+R + + +
Sbjct: 337 SDKRLYIGEIQ 347
Score = 144 (55.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 181 FNPTG-TKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G T +GY++ + +++V+ G D E Y+TLKG+ +G + + ++ T +L
Sbjct: 64 FHPNGATLASSGYDRLILMWNVY--G-DCENYATLKGH----SGAVMELHYN-TDGSLLF 115
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T ++ + E + L G V +R G L G D + WD+RK
Sbjct: 116 SASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKA 175
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
V + ++T Q + + + +GG D + ++DL+ K I Q D+V G
Sbjct: 176 SV-----HTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG 230
Query: 360 FSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVW 398
S S+S V D + E CV ++
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIRPF--APKERCVKIF 267
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 105 LHYNTDGSLLFSASTDKTVCVWD-SETG 131
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G + ++AF+ +LA G+ S ++ + +++ G + V+F G +
Sbjct: 56 GHTSPVDSVAFNSEEVLVLA-GASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEF 114
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L +G D + WD RK + + Y+ HT + P GR + +GG D +V ++
Sbjct: 115 LASGS-SDTNLRVWDTRKKGCI--QTYKG--HTRGISTIEFSPDGRWVVSGGLDNVVKVW 169
Query: 340 DLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSG 390
DL GK + F+ + FHP + A+ S R D E L G
Sbjct: 170 DLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIG 220
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 48/188 (25%), Positives = 84/188 (44%)
Query: 178 SVAFNPTGTKIFAGYNKSV-RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
SVAFN + AG + V +++D+ + + G++ SA+ F P
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLE----ESKMVRAFTGHRSN----CSAVEFHPFGE- 113
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
LA GS ++ + G G++ ++FS DG ++ +GG D + WDL
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGL-DNVVKVWDLT 172
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
A +++++ ++ E + + D P L TG D V +DL+T + I + A
Sbjct: 173 -AGKLLHE-FKCHEGPIRSL--DFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATG 228
Query: 357 VNGFSFHP 364
V +FHP
Sbjct: 229 VRAIAFHP 236
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
R + A+ A S+AF+ T T + G + +VRV+D+ + Y T + G G
Sbjct: 102 RLWKAIHTAPVA-SMAFDATSTLLATGGCDGAVRVWDI------VQHYGT--HHFRGSPG 152
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ +AF P T +L S TS ++ + L VL VT + FS DG+ + +
Sbjct: 153 VVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLS 212
Query: 283 GGRKDPYILCWDLRK-AVQVVYKLYRSSEHT-----NQRILFDIEPSGRHLGTGGQDGLV 336
GR D + WDLR ++ S E + + ++ SG H T G G++
Sbjct: 213 SGR-DKICIVWDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGIL 271
Query: 337 HIYDLQTGKWI 347
+++ +G+ +
Sbjct: 272 RVWEAASGQCV 282
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 73/278 (26%), Positives = 120/278 (43%)
Query: 36 LIRFDVPPH-RTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGI 94
L+ ++ PH R Y + + + +++SP G+ ++S D+T+R++ + G
Sbjct: 42 LMLWNFKPHARAYRYVGH-------KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK 94
Query: 95 SYDVNACSL-AKDQD-SYEASLVVTEGE-------SVYD--FCW--FPHM-----SASDP 136
+ A + + D S + + T E S+Y F + + H + P
Sbjct: 95 FSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKS 195
+ S + D I +WD T +C D+V A F V FNP+GT I AG +++
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNK--QCVNNFSDSVG--FANF-VDFNPSGTCIASAGSDQT 209
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
V+V+DV R + + Y G G+ + I+F P+ L S T I
Sbjct: 210 VKVWDV-RVNKLLQHYQVHSG------GV-NCISFHPSDN-YLVTASSDGTLKILDLLEG 260
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293
L+Y L G G V V FS+ G L+ G D +L W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLW 297
Score = 143 (55.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 61/214 (28%), Positives = 91/214 (42%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
RAY V SV F+P G + A +++VR++ + G K+S K + A
Sbjct: 52 RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG----KFSEFKAHT---AP 104
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ S + FS LA S ++ ++ LY L+ V +FS DG L
Sbjct: 105 VRS-VDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVS 161
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+D I WD Q V S N D PSG + + G D V ++D++
Sbjct: 162 CSEDKTIKIWDTTNK-QCVNNFSDSVGFAN---FVDFNPSGTCIASAGSDQTVKVWDVRV 217
Query: 344 GKWISGFQAAADTVNGFSFHP---FLPMAASSSG 374
K + +Q + VN SFHP +L + ASS G
Sbjct: 218 NKLLQHYQVHSGGVNCISFHPSDNYL-VTASSDG 250
Score = 137 (53.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 47/185 (25%), Positives = 77/185 (41%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G +++++ FSP H +LA S +T ++ D V V FS DG +
Sbjct: 58 GHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 116
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L T +D I W + + + +Y LYR HT+ P GR + + +D + I+
Sbjct: 117 LATAS-EDKSIKVWSMYRQ-RFLYSLYR---HTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 340 DLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE--------DLHLSGD 391
D + ++ F + N F+P AS+ + V D +H SG
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH-SGG 230
Query: 392 ENCVS 396
NC+S
Sbjct: 231 VNCIS 235
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 69 SPDGSSFLTSSEDKTLRIFSLPENGISY 96
SP+G T+S D L +++ + +Y
Sbjct: 27 SPNGKQLATASWDTFLMLWNFKPHARAY 54
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 48/171 (28%), Positives = 85/171 (49%)
Query: 177 FSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-H 234
+S +F+P + +G +K+VR++ + + ++ L K G + ++FSP H
Sbjct: 529 YSTSFSPDNKYLLSGSEDKTVRLWSM-------DTHTALVSYK-GHNHPVWDVSFSPLGH 580
Query: 235 TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
A S+ QT+ ++ D++ L + G V V F +G Y++TG D WD
Sbjct: 581 --YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGS-SDKTCRMWD 637
Query: 295 LRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGK 345
+ V +L+ HT I + P GR L TG +DG+++++D+ TGK
Sbjct: 638 VSTGDSV--RLFLG--HTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGK 684
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 146 (56.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 62/279 (22%), Positives = 124/279 (44%)
Query: 164 YRAYDAVDEITAAFS-VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA 222
Y+ ++E + F+ + F+P G FA + + +++ ++ + +TL G+ +G
Sbjct: 16 YKIRYTINEPSITFTAIKFSPNGQN-FACSSSNGKIY-IYNTTTG-KLITTLSGHTKG-- 70
Query: 223 GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
+S I +SP ++ +LA S T ++ + +L +T ++F++ GN L +
Sbjct: 71 --ISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILIS 128
Query: 283 GGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQ 342
G D I WD+ + L + H++ + P + + DGL+ ++DLQ
Sbjct: 129 GS-SDETITIWDITSNGGKI--LTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQ 185
Query: 343 TGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGD-------ENCV 395
T + + T+ +F AS++ FP+ E L +G + +
Sbjct: 186 TSQCLK-------TLTNSTFGGHGTATASTNDVINFPIAKVE-LSPNGQFILNSSLDGKI 237
Query: 396 SVWSFLYASMMENADGING---CE-FNCQSEHENLNQDS 430
+W+++ + + GING CE FNC + N +S
Sbjct: 238 RLWNYMENKVYKTYQGINGEKICEKFNCDIKFITRNVNS 276
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 136 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI---N 413
VN FHP + AS S R D E + +C+ S++ N DG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV---SCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 414 GCE 416
GC+
Sbjct: 249 GCQ 251
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 136 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI---N 413
VN FHP + AS S R D E + +C+ S++ N DG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV---SCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 414 GCE 416
GC+
Sbjct: 249 GCQ 251
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 136 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI---N 413
VN FHP + AS S R D E + +C+ S++ N DG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV---SCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 414 GCE 416
GC+
Sbjct: 249 GCQ 251
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 136 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI---N 413
VN FHP + AS S R D E + +C+ S++ N DG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV---SCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 414 GCE 416
GC+
Sbjct: 249 GCQ 251
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 136 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI---N 413
VN FHP + AS S R D E + +C+ S++ N DG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV---SCIEGEPGPVRSILFNPDGCCLYS 248
Query: 414 GCE 416
GC+
Sbjct: 249 GCQ 251
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/180 (25%), Positives = 88/180 (48%)
Query: 177 FSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-H 234
+ V+F+P + + +K+VR++ + + Y+ L K G + + FSP H
Sbjct: 521 YGVSFSPDNKYLLSCSEDKTVRLWSL-------DTYTALVSYK-GHTQPVWDVKFSPLGH 572
Query: 235 TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
+ A S+ QT+ ++ D++ L + G V V+F + NY++TG D WD
Sbjct: 573 YFVTA--SHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGS-SDKTCRMWD 629
Query: 295 LRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
+ V +++ HTN + P GR L +GG+DG++ ++D+ +G+ + + A
Sbjct: 630 VHTGNCV--RVFLG--HTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHA 685
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 48/210 (22%), Positives = 88/210 (41%)
Query: 162 CTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS-VRVFDVH-RPGRDFEKYSTLKGNKE 219
C Y ++ + +T + FN T + AG+ S ++++ + +P + K K +
Sbjct: 453 CMYTFHNTNNNMTC---IEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQEN 509
Query: 220 -----GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274
G +G + ++FSP + +L+ S +T ++ D L G V V+FS
Sbjct: 510 TRKLIGHSGPVYGVSFSPDNKYLLSC-SEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFS 568
Query: 275 RDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDG 334
G+Y T D W A +Y L + H N + P+ ++ TG D
Sbjct: 569 PLGHYFVTASH-DQTARLW----ATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDK 623
Query: 335 LVHIYDLQTGKWISGFQAAADTVNGFSFHP 364
++D+ TG + F ++VN + P
Sbjct: 624 TCRMWDVHTGNCVRVFLGHTNSVNCLAVSP 653
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 141 (54.7 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G+ + AG+++ + +++V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 74 FHPNGSTLASAGFDRLILLWNVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 125
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 185
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 186 AI-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 360 FS 361
S
Sbjct: 241 LS 242
Score = 140 (54.3 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 49/252 (19%), Positives = 108/252 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-SV 196
S +F+++T D + +WD+ TG R + + + P + G + +V
Sbjct: 122 SMLFSAST-DKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTV 176
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
+++D+ + T + + + A+ F+ T +++ G ++ +
Sbjct: 177 KLWDIRKKAA----IQTFQNTYQ-----VLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNK 226
Query: 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQ 314
L Y + G VT + S +G+YL + D + WD+R + K+++ + H +
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 315 RILFDIE--PSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+ L P G + G D V+++D + + + A ++N +FHP P+ S+
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISA 345
Query: 373 SGHRRFPVDDFE 384
S +R + + +
Sbjct: 346 SSDKRLYMGEIQ 357
Score = 44 (20.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWD-SETG 141
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 142 (55.0 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G+ + AG+++ + +++V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 126
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
V ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 187 AV-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 360 FS 361
S
Sbjct: 242 LS 243
Score = 140 (54.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 49/252 (19%), Positives = 108/252 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-SV 196
S +F+++T D + +WD+ TG R + + + P + G + +V
Sbjct: 123 SMLFSAST-DKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTV 177
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
+++D+ + T + + + A+ F+ T +++ G ++ +
Sbjct: 178 KLWDIRKKAA----VQTFQNTYQ-----VLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNK 227
Query: 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQ 314
L Y + G VT + S +G+YL + D + WD+R + K+++ + H +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 315 RILFDIE--PSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+ L P G + G D V+++D + + + A ++N +FHP P+ S+
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSA 346
Query: 373 SGHRRFPVDDFE 384
S +R + + +
Sbjct: 347 SSDKRLYMGEIQ 358
Score = 44 (20.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWD-SETG 142
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 141 (54.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G+ + AG+++ + +++V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 126
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 187 AI-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 360 FS 361
S
Sbjct: 242 LS 243
Score = 140 (54.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 49/252 (19%), Positives = 108/252 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-SV 196
S +F+++T D + +WD+ TG R + + + P + G + +V
Sbjct: 123 SMLFSAST-DKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTV 177
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
+++D+ + T + + + A+ F+ T +++ G ++ +
Sbjct: 178 KLWDIRKKAA----IQTFQNTYQ-----VLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNK 227
Query: 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQ 314
L Y + G VT + S +G+YL + D + WD+R + K+++ + H +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 315 RILFDIE--PSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+ L P G + G D V+++D + + + A ++N +FHP P+ S+
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSA 346
Query: 373 SGHRRFPVDDFE 384
S +R + + +
Sbjct: 347 SSDKRLYMGEIQ 358
Score = 44 (20.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWD-SETG 142
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 141 (54.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G+ + AG+++ + +++V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 126
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 187 AI-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 360 FS 361
S
Sbjct: 242 LS 243
Score = 140 (54.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 49/252 (19%), Positives = 108/252 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-SV 196
S +F+++T D + +WD+ TG R + + + P + G + +V
Sbjct: 123 SMLFSAST-DKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTV 177
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
+++D+ + T + + + A+ F+ T +++ G ++ +
Sbjct: 178 KLWDIRKKAA----IQTFQNTYQ-----VLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNK 227
Query: 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQ 314
L Y + G VT + S +G+YL + D + WD+R + K+++ + H +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 315 RILFDIE--PSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+ L P G + G D V+++D + + + A ++N +FHP P+ S+
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSA 346
Query: 373 SGHRRFPVDDFE 384
S +R + + +
Sbjct: 347 SSDKRLYMGEIQ 358
Score = 44 (20.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWD-SETG 142
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 147 (56.8 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G+++ +G D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL-DTDIKLWDVR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ ++K Y+S HT P G+ L + D V ++DL GK + F +
Sbjct: 136 RK-GCIFK-YKS--HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADG 411
VN FHP + AS S R D E H+ +C+ + ++ N DG
Sbjct: 192 VNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVV---SCIEEEATPVRCILFNPDG 243
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 58/244 (23%), Positives = 111/244 (45%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191
++D S V AS D + +++ T + T + + F FNP + + +G
Sbjct: 130 SADSKSIVTASD--DKTLKIYEVPTVKMAKTLKGHT-----NYVFCCNFNPQSSLVVSGS 182
Query: 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251
+++SVR++DV R G + TL + + +SA++F+ + ++ GSY I+
Sbjct: 183 FDESVRIWDV-RTGMCVK---TLPAHSDP----VSAVSFNRDGS-LITSGSYDGLVRIWD 233
Query: 252 EDNMELLYVLHGQEGG-VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE 310
N + + L E V V+FS +G Y+ + D + WD K + K Y+ E
Sbjct: 234 TANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNL-DNTLKLWDFGKGKTL--KQYQGHE 290
Query: 311 HTNQRILFDIEPSG-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMA 369
+ I + +G + + +G +D +++++LQT + + + V HP M
Sbjct: 291 NNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMI 350
Query: 370 ASSS 373
AS +
Sbjct: 351 ASGA 354
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 140 (54.3 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 50/252 (19%), Positives = 108/252 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-SV 196
S +F+++T D + +WD+ TG R + + + P + G + +V
Sbjct: 149 SMLFSAST-DKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTV 203
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
+++D+ + T + + + A+ F+ T +++ G ++ +
Sbjct: 204 KLWDIRKKAA----VQTFQNTYQ-----VLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNK 253
Query: 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQ 314
L Y + G VT + S +G+YL + D + WD+R + K+++ + H +
Sbjct: 254 LTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRIWDVRPFAPKERCVKIFQGNVHNFE 312
Query: 315 RILFDIE--PSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+ L P G + G D V+++D + + + A +VN +FHP P+ S+
Sbjct: 313 KNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSA 372
Query: 373 SGHRRFPVDDFE 384
S +R + + +
Sbjct: 373 SSDKRLYMGEIQ 384
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/182 (26%), Positives = 87/182 (47%)
Query: 181 FNPTG-TKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G T AG+++ + +++V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 101 FHPWGNTLASAGFDRLILLWNVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 152
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 153 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 212
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
V ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 213 AV-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 267
Query: 360 FS 361
S
Sbjct: 268 LS 269
Score = 44 (20.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 142 LHYNTDGSMLFSASTDKTVAVWD-SETG 168
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 115 (45.5 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277
++G M+A+A+SP ++ + ++ + L GVT QFS+ G
Sbjct: 334 QQGHLDSMNALAYSPDGQRIVTAADDGKIK-VWDVKSGFCLVTFTEHTSGVTACQFSKKG 392
Query: 278 NYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFD---IEPSGRHLGTGGQDG 334
N L+T D + WDL + Y+ +R+ + R+ F ++PSG + G D
Sbjct: 393 NVLFTSSL-DGSVRAWDL-----IRYRNFRTFTAPS-RLSFSSLAVDPSGEVICAGSPDS 445
Query: 335 L-VHIYDLQTGKWISGFQAAADTVNGFSF 362
+H++ +QTG+ + V+ +F
Sbjct: 446 FDIHVWSVQTGQLLDQLSGHEGPVSALAF 474
Score = 88 (36.0 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 22/128 (17%), Positives = 51/128 (39%)
Query: 235 TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
+ +L +G + +Y +++L + + V ++ G +L G K +L W+
Sbjct: 265 SNLLVVGFSNGLFGLYELPEFNTIHLLSISQSNIDVVSINKTGEWLAFGSSKFGQLLVWE 324
Query: 295 LRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
+ ++ + H + P G+ + T DG + ++D+++G + F
Sbjct: 325 WQSESYIL----KQQGHLDSMNALAYSPDGQRIVTAADDGKIKVWDVKSGFCLVTFTEHT 380
Query: 355 DTVNGFSF 362
V F
Sbjct: 381 SGVTACQF 388
Score = 80 (33.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSL-PENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124
I+WS D LT+S+D T R++SL PE+G +L+ + A+ + ES+Y
Sbjct: 157 IEWSSDSRFLLTASKDLTARVWSLDPEDGFE----PTTLSGHRQGVRAAFFSADQESIYT 212
Query: 125 -------FCWFPHMSASDP 136
F W ++S DP
Sbjct: 213 VSRDCALFRW-EYVSKKDP 230
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 134 (52.2 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 136 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 357 VNGFSFHPFLPMAASSS 373
VN FHP + AS S
Sbjct: 192 VNVVEFHPNEYLLASGS 208
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 141 (54.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G+ + AG+++ + +++V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 126
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 187 AI-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 360 FS 361
S
Sbjct: 242 LS 243
Score = 137 (53.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 48/252 (19%), Positives = 108/252 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-SV 196
S +F+++T D + +WD+ TG R + + + P + G + +V
Sbjct: 123 SMLFSAST-DKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTV 177
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
+++D+ + T + + + A+ F+ T +++ G ++ +
Sbjct: 178 KLWDIRKKAA----IQTFQNTYQ-----VLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNK 227
Query: 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQ 314
L Y + G VT + S +G+YL + D + WD+R + ++++ + H +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 315 RILFDIE--PSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+ L P G + G D V+++D + + + A ++N +FHP P+ S+
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSA 346
Query: 373 SGHRRFPVDDFE 384
S +R + + +
Sbjct: 347 SSDKRLYMGEIQ 358
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWD-SETG 142
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 144 (55.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 74/308 (24%), Positives = 129/308 (41%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSL-AKDQD-SYEASLVVTEGE--- 120
+++SP G+ ++S D+T+R++ + G S + A + + D S + + T E
Sbjct: 66 VQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 121 -------------SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
S+Y + + P + S + D I +WD T +C
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK--QCVNNFS 183
Query: 168 DAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
D+V A F V FNP GT I AG + +V+++D+ R + + Y G G+ +
Sbjct: 184 DSVG--FANF-VDFNPNGTCIASAGSDHTVKIWDI-RVNKLLQHYQVHSG------GV-N 232
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
++F P+ ++ S + D +E L+Y L G G V V FS+ G L++ G
Sbjct: 233 CVSFHPSGNYIITASSDGTLKIL---DLLEGRLIYTLQGHTGPVFTVSFSKGGE-LFSSG 288
Query: 285 RKDPYILCW----DLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGL----- 335
D +L W D ++ + + + L DI P H G + +
Sbjct: 289 GADTQVLLWRTNFDYLNCKDMIKRNLKRLHFDSSPHLVDIYPRTPHPHEGKIETVEINPK 348
Query: 336 VHIYDLQT 343
+ + DLQT
Sbjct: 349 LEVIDLQT 356
Score = 143 (55.4 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 66/243 (27%), Positives = 98/243 (40%)
Query: 137 TSCVFASTTRDHPIHLWDATTGLLRCT--YRAYDAVDEITAAFSVAFNPTGTKIF-AGYN 193
TS F+ + + WD L C RA+ V SV F+P G + A +
Sbjct: 22 TSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRD 81
Query: 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253
++VR++ + G K S K + A + S + FS LA S ++ ++
Sbjct: 82 RTVRLWIPDKRG----KSSEFKAHT---APVRS-VDFSADGQ-FLATASEDKSIKVWNMY 132
Query: 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTN 313
LY L+ V +FS DG L +D I WD Q V S N
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFAN 190
Query: 314 QRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPF--LPMAAS 371
D P+G + + G D V I+D++ K + +Q + VN SFHP + AS
Sbjct: 191 ---FVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITAS 247
Query: 372 SSG 374
S G
Sbjct: 248 SDG 250
Score = 37 (18.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFS 88
+ + +SP G T+S D L +++
Sbjct: 21 ITSVDFSPSGKQLATASWDTFLMLWN 46
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 122 (48.0 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPG 205
D + LWD G T R ++ SVAF+ +I +G +K++++++
Sbjct: 85 DQTLRLWDLAAGK---TTRRFEG--HTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLA-- 137
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQTSAIYREDNMELLYVLHGQ 264
E T++ ++G +S + FSP H+ + + + +T ++ N +L HG
Sbjct: 138 ---ECKFTIQ--EDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGH 192
Query: 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
G + V S DG+ L T G KD L WDL
Sbjct: 193 NGYLNTVTVSPDGS-LCTSGGKDSKALLWDL 222
Score = 59 (25.8 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 18 DTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLT 77
D + +A ++ W L R + T + Y Q R ++F+ + S DG+ L+
Sbjct: 27 DPDTIISASRDKTLIVWKLTRDE----DTNYGYPQKRLYG-HSHFISDVVLSSDGNYALS 81
Query: 78 SSEDKTLRIFSL 89
S D+TLR++ L
Sbjct: 82 GSWDQTLRLWDL 93
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 146 (56.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
R + A+ A ++AF+PT T + G + +VRV+DV R Y T + G G
Sbjct: 102 RLWKAIHTAPVA-TMAFDPTSTLLATGGCDGAVRVWDVVRC------YGT--HHFRGSPG 152
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ +AF P +L S + TS ++ L VL VT + FS DG+ + +
Sbjct: 153 VVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLS 212
Query: 283 GGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPS--------GRHLGTGGQDG 334
GR D + WDLR ++Q + E +L EP+ G H T G G
Sbjct: 213 SGR-DKICVIWDLR-SLQAT-RTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQG 269
Query: 335 LVHIYDLQTGKWISGFQ 351
+ +++ +G+ + Q
Sbjct: 270 ALRVWEAASGRCVHAQQ 286
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 146 (56.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
R + A+ A ++AF+PT T + G + +VRV+DV R Y T + G G
Sbjct: 102 RLWKAIHTAPVA-TMAFDPTSTLLATGGCDGAVRVWDVVRC------YGT--HHFRGSPG 152
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ +AF P +L S + TS ++ L VL VT + FS DG+ + +
Sbjct: 153 VVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLS 212
Query: 283 GGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPS--------GRHLGTGGQDG 334
GR D + WDLR ++Q + E +L EP+ G H T G G
Sbjct: 213 SGR-DKICVIWDLR-SLQAT-RTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQG 269
Query: 335 LVHIYDLQTGKWISGFQ 351
+ +++ +G+ + Q
Sbjct: 270 ALRVWEAASGRCVHAQQ 286
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 146 (56.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 55/221 (24%), Positives = 100/221 (45%)
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194
P V + TR + W G + R + A+ A ++AF+PT T + G +
Sbjct: 73 PDDQVLVTATRALLLAQWAWREGSIT---RLWKAIHTAPVA-TMAFDPTSTLLATGGCDG 128
Query: 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-TSAIYRED 253
+VRV+D+ R Y T + G G++ + F P +L S + T ++
Sbjct: 129 AVRVWDIVR------HYGT--HHFRGSPGVVHLVTFHPDPARLLLFSSAADATIRMWSLQ 180
Query: 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR--KAVQVVYKLYRSSEH 311
+ L V+ VT + FS DG+ + + GR D + WDL+ +A + V ++ S E
Sbjct: 181 DQSCLAVMTAHYSAVTSLTFSADGHTMLSSGR-DKICVIWDLQSHQATRTV-PVFESVEA 238
Query: 312 T---NQRIL--FDIEPSGRHLGTGGQDGLVHIYDLQTGKWI 347
+ ++ D++ G H T G GL+ +++ +G+ +
Sbjct: 239 AVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVWEAASGQCV 279
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/191 (24%), Positives = 82/191 (42%)
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
+G A + + SP ++ A GS+ +T+ ++ D L + G V V+F + N
Sbjct: 381 QGHAYPVWDVDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 279 YLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
YL TG D + W ++ V +L+ H + P+G++L + G+D + +
Sbjct: 440 YLATGST-DKTVRLWSAQQGNSV--RLFTG--HRGPVLSLAFSPNGKYLASAGEDQRLKL 494
Query: 339 YDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGD-ENCVSV 397
+DL +G + D + +F P + AS+S V D + H S + S
Sbjct: 495 WDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSE 554
Query: 398 WSFLYASMMEN 408
+Y M N
Sbjct: 555 LVGVYTGQMSN 565
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 65/254 (25%), Positives = 107/254 (42%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY 192
A P + T D I LWD +T +R + ++ +I +S+ F+ G I +G
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHE--QDI---YSLDFSHNGRFIVSGS 421
Query: 193 -NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251
+++ R++DV G+ K G ++AIA SP +A+GS Q ++
Sbjct: 422 GDRTARLWDVET-GQCILKLEIENG--------VTAIAISPNDQ-FIAVGSLDQIIRVWS 471
Query: 252 EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRS--- 308
L+ L G + V + FS D + L +G D I W+L+ V +
Sbjct: 472 VSGT-LVERLEGHKESVYSIAFSPDSSILLSGSL-DKTIKVWELQATRSVGLSAIKPEGI 529
Query: 309 -----SEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFH 363
+ HT+ + + P R +G +D + +DLQTG+ Q ++V F
Sbjct: 530 CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFS 589
Query: 364 PFLPMAASSSGHRR 377
P AS SG R
Sbjct: 590 PDGRQFASGSGDLR 603
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 43/195 (22%), Positives = 81/195 (41%)
Query: 179 VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML 238
V F+ G + G N++ VFDV + F + + + + IAFSP L
Sbjct: 319 VKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHE--ESPDPSRDLYVRTIAFSPDGK-YL 375
Query: 239 AIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298
G+ + ++ ++ YV G E + + FS +G ++ +G D WD+
Sbjct: 376 VTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG-DRTARLWDVETG 434
Query: 299 VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVN 358
Q + KL E N I P+ + + G D ++ ++ + +G + + ++V
Sbjct: 435 -QCILKL----EIENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVY 488
Query: 359 GFSFHPFLPMAASSS 373
+F P + S S
Sbjct: 489 SIAFSPDSSILLSGS 503
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G+ + AG+++ + +++V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 74 FHPNGSTLASAGFDRLILLWNVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 125
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 185
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 186 AI-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 360 FS 361
S
Sbjct: 241 LS 242
Score = 129 (50.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 54/285 (18%), Positives = 117/285 (41%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-SV 196
S +F+++T D + +WD+ TG R + + + P + G + +V
Sbjct: 122 SMLFSAST-DKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTV 176
Query: 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256
+++D+ + T + + + A+ F+ T +++ G ++ +
Sbjct: 177 KLWDIRKKAA----IQTFQNTYQ-----VLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNK 226
Query: 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTNQ 314
L Y + G VT + S +G+YL + D + WD+R + K+++ + H +
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 315 RILFDIE--PSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
+ L P G + G D V+++D + + + A ++N +FHP P+ +
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
Query: 373 ------SGHRRF-----PVDDFEDLHLSGDENCVSVWS-FLYASM 405
GH P + ++G +C + + F++ SM
Sbjct: 346 FHRIGQGGHELLTSSNPPASASQSAGITGVSHCAQLQTVFMWVSM 390
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+ ++ DGS ++S DKT+ ++ E G
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWD-SETG 141
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/182 (25%), Positives = 87/182 (47%)
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P G+ + AG+++ + ++ V+ G D + Y+TLKG+ +G + + ++ T ML
Sbjct: 75 FHPNGSTLASAGFDRLILLWSVY--G-DCDNYATLKGH----SGAVMELHYN-TDGSMLF 126
Query: 240 IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299
S +T A++ + E + L G V +R G L G D + WD+RK
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ ++ ++T Q + + + +GG D + ++DL+ K + AD+V G
Sbjct: 187 AI-----QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 360 FS 361
S
Sbjct: 242 LS 243
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 134 (52.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/187 (23%), Positives = 88/187 (47%)
Query: 178 SVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
+VA N +G+ G Y+++ +++D G E+ +TL+G++ ++ AIAF+ +
Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDT-ASG---EELNTLEGHRN----VVYAIAFNNPYGD 148
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
+A GS+ +T ++ + + + G + + F+ + TG D WD++
Sbjct: 149 KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSM-DTTAKLWDIQ 207
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+V Y L R H+ + I SG + TG D V ++D TG+ ++
Sbjct: 208 NGEEV-YTL-RG--HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAE 263
Query: 357 VNGFSFH 363
++ SF+
Sbjct: 264 ISSASFN 270
Score = 132 (51.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 45/159 (28%), Positives = 78/159 (49%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN-PTGTKIFAG-YNKS 195
SC F + + D LWD +G T + V +++AFN P G KI G ++K+
Sbjct: 105 SC-FITGSYDRTCKLWDTASGEELNTLEGHRNV-----VYAIAFNNPYGDKIATGSFDKT 158
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
+++ V G+ Y T +G+ A I+ ++F+P T ++A GS T+ ++ N
Sbjct: 159 CKLWSVET-GKC---YHTFRGHT---AEIV-CLSFNPQST-LVATGSMDTTAKLWDIQNG 209
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
E +Y L G + + F+ G+ + TG D ++ WD
Sbjct: 210 EEVYTLRGHSAEIISLSFNTSGDRIITGSF-DHTVVVWD 247
Score = 112 (44.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 50/166 (30%), Positives = 69/166 (41%)
Query: 132 SASDPTSCVFAST-TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF- 189
SAS C T + D LWDAT G T +D DEI + F+ TG I
Sbjct: 266 SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD--DEILDS---CFDYTGKLIAT 320
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLK--GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247
A + + R+F +T K EG G +S I+F+P +L GS +T+
Sbjct: 321 ASADGTARIFSA----------ATRKCIAKLEGHEGEISKISFNPQGNHLLT-GSSDKTA 369
Query: 248 AIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293
I+ + L VL G + F+ GN + TG KD W
Sbjct: 370 RIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS-KDNTCRIW 414
Score = 112 (44.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 45/187 (24%), Positives = 81/187 (43%)
Query: 179 VAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
++FNP T + G + + +++D+ G E Y TL+G+ A I+S ++F+ T
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQN-GE--EVY-TLRGHS---AEIIS-LSFN-TSGDR 233
Query: 238 LAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297
+ GS+ T ++ D + +L G ++ F+ D + + TG D WD
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSM-DKTCKLWDATN 292
Query: 298 AVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTV 357
V E + FD +G+ + T DG I+ T K I+ + +
Sbjct: 293 GKCVATLTGHDDEILDS--CFDY--TGKLIATASADGTARIFSAATRKCIAKLEGHEGEI 348
Query: 358 NGFSFHP 364
+ SF+P
Sbjct: 349 SKISFNP 355
Score = 107 (42.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 50/188 (26%), Positives = 82/188 (43%)
Query: 178 SVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
S++FN +G +I G ++ +V V+D GR K + L G+ A I SA +F+
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADT-GR---KVNILIGHC---AEISSA-SFN-WDCS 274
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY-ILCWDL 295
++ GS +T ++ N + + L G + + F G + T I
Sbjct: 275 LILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334
Query: 296 RKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAAD 355
RK + KL E +I F+ P G HL TG D I+D QTG+ + + D
Sbjct: 335 RKCIA---KL-EGHEGEISKISFN--PQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTD 388
Query: 356 TVNGFSFH 363
+ +F+
Sbjct: 389 EIFSCAFN 396
Score = 51 (23.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 44 HRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIF 87
+ T++ + + +P L + + GS F+T S D+T +++
Sbjct: 79 NHTFYLFKVLKAHILP---LTNVALNKSGSCFITGSYDRTCKLW 119
Score = 46 (21.3 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 69 SPDGSSFLTSSEDKTLRIFSLPENGISY 96
+P G T S DKT +++S+ E G Y
Sbjct: 144 NPYGDKIATGSFDKTCKLWSV-ETGKCY 170
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180
S+Y + + P + S + D I +WD T +C D+V A F V
Sbjct: 9 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK--QCVNNFSDSVG--FANF-VD 63
Query: 181 FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
FNP+GT I AG +++V+V+DV R + + Y G G+ + I+F P+ ++
Sbjct: 64 FNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHSG------GV-NCISFHPSGNYLIT 115
Query: 240 IGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293
S + D +E L+Y L G G V V FS+ G L+ G D +L W
Sbjct: 116 ASSDGTLKIL---DLLEGRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLW 167
Score = 114 (45.2 bits), Expect = 0.00093, P = 0.00093
Identities = 40/129 (31%), Positives = 56/129 (43%)
Query: 249 IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRS 308
+YR+ LY L+ V +FS DG L +D I WD Q V S
Sbjct: 1 MYRQ---RFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTNK-QCVNNFSDS 55
Query: 309 SEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHP---F 365
N D PSG + + G D V ++D++ K + +Q + VN SFHP +
Sbjct: 56 VGFAN---FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNY 112
Query: 366 LPMAASSSG 374
L + ASS G
Sbjct: 113 L-ITASSDG 120
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 61/243 (25%), Positives = 99/243 (40%)
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS 195
P V S + D I +W T G RA+++ A ++ + TG + +
Sbjct: 275 PAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHES-----AVTGLSLHATGDYLLSSSEDQ 329
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
F + GR K + + AG A+ + H L G+ + S I D
Sbjct: 330 YWAFSDIQTGRVLTKVT------DETAGC--ALTCAQFHPDGLIFGTGTGDSQIKIWDLK 381
Query: 256 ELLYVLH--GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTN 313
E V + G G VT + FS +G YL TG + D + WDLRK ++ + + +
Sbjct: 382 ERTNVANFPGHSGPVTAIAFSENGYYLATGAQ-DSSLKLWDLRK-LKNFKTITLDNNYEV 439
Query: 314 QRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
+ ++FD SG +L GG D + +Y + + F + V G +F AS+
Sbjct: 440 KSLVFD--QSGTYLAVGGSD--IRVYICKQWSEVLNFSDHSGLVTGVAFGEHAQFLASTG 495
Query: 374 GHR 376
R
Sbjct: 496 MDR 498
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 136 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFE 384
VN FHP + AS S R D E
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDLE 219
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/204 (26%), Positives = 92/204 (45%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
+A+NP GT + + G ++SVR++ GR+ + + EG + +A+SP
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIW-----GREGDSWICKSVLCEGHQRTVRKVAWSPCGN-Y 75
Query: 238 LAIGSYSQTSAIYR--EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA S+ T+ I++ ED+ E + L G E V V ++ GN L T R D + W++
Sbjct: 76 LASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 296 RKAVQVVYKLYRSSEHTNQRILFDI-EPSGRHLGTGGQDGLVHIYDLQTGKWI--SGFQA 352
+ + +S HT Q + + PS L + D V +Y + W+ + +
Sbjct: 135 DEEDEYECVSVLNS-HT-QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEG 192
Query: 353 AADTVNGFSFHPFLPMAASSSGHR 376
TV +F P AS S R
Sbjct: 193 HESTVWSLAFDPSGQRLASCSDDR 216
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 121 (47.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 51/217 (23%), Positives = 99/217 (45%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFA- 190
A P A + D +W+ + L T+ +++ T SVA++ TGT +
Sbjct: 76 AWSPCGRFLAGASFDASTSIWEKSKDELEFTH--VSSLEGHTYEVKSVAWDSTGTLLATC 133
Query: 191 GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250
+KS+ ++ + DFE S G+ GQ + + + P +LA SY T +
Sbjct: 134 SRDKSIWIWQME-DDNDFECLSINSGH--GQD--IKCVLWHPNEE-LLASSSYDDTIKFW 187
Query: 251 RE-D-NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRS 308
++ D + E + L G E + + F++DG+ L + G +D +L W K + +++
Sbjct: 188 KDIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCG-EDKLVLFWKFDKENEKWINIFKF 246
Query: 309 SEHTNQRILFDIEPSG--RHLGTGGQDGLVHIYDLQT 343
++ N R ++ I+ S + TG D + Y+ ++
Sbjct: 247 -KNENSRPIYSIDWSSLTNTIVTGSADDSIIFYEQES 282
Score = 57 (25.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
P + + + W P+G T + DK ++I+S NG
Sbjct: 23 PYDKVWNLAWHPNGEILATCANDKYIQIWSKDTNG 57
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G+++ +G D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL-DTDIKLWDVR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ ++K Y+S HT P G+ L + D V ++DL GK + F
Sbjct: 136 RK-GCIFK-YKS--HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 357 VNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADG 411
VN FHP A S HR D E H+ +C+ + ++ N DG
Sbjct: 192 VNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVV---SCIEEEATPVRCILFNPDG 243
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 130 (50.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G ++ +G + D I WD+R
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ-DTNIKLWDIR 139
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ V++ YR + + F P G+ L + D V ++DL GK +S F
Sbjct: 140 RK-GCVFR-YRGHSQAVRCLRFS--PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 195
Query: 357 VNGFSFHP 364
VN FHP
Sbjct: 196 VNVVEFHP 203
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 129 (50.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 57/206 (27%), Positives = 97/206 (47%)
Query: 141 FA-STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRV 198
FA S + D + LWD G+ T R ++ SVAF+ +I A ++++++
Sbjct: 77 FALSGSWDGELRLWDLAAGV--STRRFVGHTKDV---LSVAFSLDNRQIVSASRDRTIKL 131
Query: 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP-THTGMLAIGSYSQTSAIYREDNMEL 257
++ G KY+ +G EG +S + FSP T + S+ +T ++ N +L
Sbjct: 132 WNTL--GEC--KYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 258 LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRIL 317
L G G V+ V S DG+ +GG KD +L WDL + ++ Y L +S +
Sbjct: 187 RSTLAGHTGYVSTVAVSPDGSLCASGG-KDGVVLLWDLAEGKKL-YSLEANS--VIHALC 242
Query: 318 FDIEPSGRHLGTGGQDGLVHIYDLQT 343
F P+ L + G + I+DL++
Sbjct: 243 FS--PNRYWLCAATEHG-IKIWDLES 265
Score = 47 (21.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 18 DTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLT 77
+ ++ +A ++ W L + D + Y + T ++F++ + S DG L+
Sbjct: 27 NADIIVSASRDKSIILWKLTKDD----KAYGVAQRRLTGH--SHFVEDVVLSSDGQFALS 80
Query: 78 SSEDKTLRIFSLPENGIS 95
S D LR++ L G+S
Sbjct: 81 GSWDGELRLWDLAA-GVS 97
Score = 40 (19.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 71 DGSSFLTS-SEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCW 127
D + + S S DK++ ++ L ++ +Y V L E ++ ++G+ W
Sbjct: 26 DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW 83
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 46/191 (24%), Positives = 80/191 (41%)
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
+G A + + SP H+ A S+ +T+ ++ D L + G V V+F + N
Sbjct: 377 QGHAYPVWDLDISP-HSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 435
Query: 279 YLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
YL TG D + W ++ V +L+ H + P+G++L + G+D + +
Sbjct: 436 YLATGST-DKTVRLWSTQQGNSV--RLFTG--HRGPVLSLAFSPNGKYLASAGEDQRLKL 490
Query: 339 YDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGD-ENCVSV 397
+DL +G + D + +F P + AS+S V D H S + S
Sbjct: 491 WDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSE 550
Query: 398 WSFLYASMMEN 408
+Y M N
Sbjct: 551 LVGVYTGQMSN 561
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 134 (52.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 56/205 (27%), Positives = 96/205 (46%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
VA+NP GT + + G ++++R++ R G +E + L+ +G + +A+SP
Sbjct: 22 VAWNPKGTLLASCGGDRAIRIWG--REGDSWECKTVLQ---DGHQRAVRKVAWSPCGN-Y 75
Query: 238 LAIGSYSQTSAIYRE--DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA S+ T+ I+++ D+ E L VL G E V V ++ GN L T R D + W++
Sbjct: 76 LASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSR-DKSVWIWEV 134
Query: 296 RKAVQVVYKLYRS-SEHTNQRILFDI-EPSGRHLGTGGQDGLVHIYDLQTGKWI--SGFQ 351
+ + Y+ + HT Q + + P+ L + D V +Y + W + +
Sbjct: 135 DEEDE--YECVSVVNSHT-QDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLE 191
Query: 352 AAADTVNGFSFHPFLPMAASSSGHR 376
TV G +F P AS S R
Sbjct: 192 GHTSTVWGLTFDPSGQRLASCSDDR 216
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 67/268 (25%), Positives = 111/268 (41%)
Query: 127 WFPHMSASDPTSC-VFASTTRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H SC V A+ D I +W+ TGLL + D V +++ F P+
Sbjct: 111 WARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPS 164
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 165 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 216
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 217 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTNVIMWDPYTGERLR 275
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
QV + S H + P G +L T D L+ I+ L+ I A A
Sbjct: 276 SLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPI----AFA 331
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 332 PMTNGLCCTFFPHGGVIATGTRDGHVQF 359
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 64/268 (23%), Positives = 112/268 (41%)
Query: 127 WFPHMSASDPTSCVFAST-TRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H + SC+ +T D I +W+ TGLL + D V +++ F P+
Sbjct: 111 WARHHPQAPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPS 164
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 165 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 216
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 217 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTSVIMWDPYTGERLR 275
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
Q+ + S H + P G +L T D L+ I+ L+ + A A
Sbjct: 276 SLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALE----LKAPVAFA 331
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 332 PMTNGLCCTFFPHGGIIATGTRDGHVQF 359
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 56/242 (23%), Positives = 107/242 (44%)
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPTGTKIFA-GYN 193
P + AS + D I +WD TG L T + + DAV++I A + G ++ + +
Sbjct: 116 PLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDI------AIDAAGKQLVSCSSD 169
Query: 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253
S++++D G+ ++ +LKG++ +S++ F PT +L+ S T +
Sbjct: 170 LSIKLWDF---GQTYDCLKSLKGHEH----TVSSVTFLPTGDFVLS-ASRDHTIKQWDIS 221
Query: 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR-KAVQVVYKLYRSS--- 309
+Y G V ++ S DG L+ D + W K+ ++V + + +
Sbjct: 222 TGYCVYTFRGHNDWVRMIRISNDGT-LFASASLDQTVTVWSFATKSAKLVLRDHEHAVEC 280
Query: 310 -EHTNQRILFDI---EPSGR--H-LGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSF 362
E ++ +P G H L +G +D + +++ TG + A + V G +F
Sbjct: 281 VEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAF 340
Query: 363 HP 364
HP
Sbjct: 341 HP 342
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 67/268 (25%), Positives = 111/268 (41%)
Query: 127 WFPHMSASDPTSC-VFASTTRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H SC V A+ D I +W+ TGLL + D V +++ F P+
Sbjct: 113 WARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPS 166
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 167 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 218
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 219 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTNVIMWDPYTGERLR 277
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
QV + S H + P G +L T D L+ I+ L+ I A A
Sbjct: 278 SLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPI----AFA 333
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 334 PMTNGLCCTFFPHGGVIATGTRDGHVQF 361
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 139 (54.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
R + A+ A S+AF+ T T + G + +VRV+D+ + Y T + G G
Sbjct: 102 RLWKAIHTAPVA-SMAFDATSTLLATGGCDGAVRVWDI------VQHYGT--HHFRGSPG 152
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ +AF P T +L S TS ++ + L VL VT + FS G+ + +
Sbjct: 153 VVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLS 212
Query: 283 GGRKDPYILCWDLR-----KAVQVVYKLYRSSEHTNQRI-LFDIEPSGRHLGTGGQDGLV 336
GR D + WDL+ + V V + S Q ++ SG H T G G++
Sbjct: 213 SGR-DKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGIL 271
Query: 337 HIYDLQTGKWI 347
+++ +G+ +
Sbjct: 272 RVWEAASGQCV 282
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 135 (52.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 67/268 (25%), Positives = 111/268 (41%)
Query: 127 WFPHMSASDPTSC-VFASTTRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H SC V A+ D I +W+ TGLL + D V +++ F P+
Sbjct: 128 WARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPS 181
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 182 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 233
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 234 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTNVIMWDPYTGERLR 292
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
QV + S H + P G +L T D L+ I+ L+ I A A
Sbjct: 293 SLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPI----AFA 348
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 349 PMTNGLCCTFFPHGGVIATGTRDGHVQF 376
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 128 (50.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 57/221 (25%), Positives = 93/221 (42%)
Query: 177 FSVAFNPTGTKIFAGYN-KSVRV--FDV---HRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230
+ VA++P G + G N K V+V F+ + G D E +S G A M
Sbjct: 666 YCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLE-FSMHDGTIRDLA-FMEG--- 720
Query: 231 SPTHTGMLAIGSYSQTSAIYREDNM--ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288
P G + I + + IY D + L+ L G G + + ++ G ++ G +D
Sbjct: 721 -PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILAL-YTWSG-WMIASGSQDK 777
Query: 289 YILCWDLR--KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKW 346
+ WDLR V+VV + + + D PSGR L TG +D +YD++ G+
Sbjct: 778 TVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVD--PSGRLLATGQEDSSCMLYDIRGGRM 835
Query: 347 ISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE-DL 386
+ + + V F P + S + V D + DL
Sbjct: 836 VQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDL 876
Score = 58 (25.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPE 91
++ + + P GS + S KTLR+ + PE
Sbjct: 610 VRAVAFHPSGSLYAVGSNSKTLRVCAYPE 638
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 134 (52.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 60/257 (23%), Positives = 104/257 (40%)
Query: 133 ASDPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191
A PT +T D LW G + D ++ +AF+ G + +G
Sbjct: 77 ACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHK--DSVSC---LAFSYDGQLLASG 131
Query: 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250
+ V++FD TLK +G + + + P +LA GS + ++
Sbjct: 132 GLDGVVQIFDASS--------GTLKCVLDGPGAGIEWVRWHPRGHIVLA-GSEDCSLWMW 182
Query: 251 REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE 310
D L + G VT F+ DG + TG D ++ W+ K + ++ +
Sbjct: 183 NADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGS-DDASLIVWN-PKTCESIHIVKGHPY 240
Query: 311 HTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPF---LP 367
HT DI + +G +DG VHI ++ TGK +S + D+V F P +P
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 368 MAASSSGHRRFPVDDFE 384
+AA+ ++ + D +
Sbjct: 301 LAATGGMDKKLIIWDLQ 317
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 132 (51.5 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 59/243 (24%), Positives = 100/243 (41%)
Query: 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYN-KSVRV 198
++ + T D I +WD+ G L R + V + + P + +G + +S R+
Sbjct: 120 IYTACT-DKSIGVWDSNKGELIKRIREHSGV--VNSCCPARRGPP--LVASGSDDRSARI 174
Query: 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-L 257
FD G + L +K ++++ FS + L G ++ N E
Sbjct: 175 FDTRSKGS-----THLFQHKYP----VTSVCFSDA-SDQLITGGIDNVIRVWDIRNQEDP 224
Query: 258 LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV--YKLYRSSEHTNQR 315
LY L + +T S+DG YL + D WD+R K + +++ ++
Sbjct: 225 LYTLASHQDTITSTSVSKDGAYLLSNSM-DNSCKIWDIRPYAPPNRNIKTFNGAQNNFEK 283
Query: 316 ILFDIEPS--GRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
L S GR +G G D V+I+D T + + TVN +FHP P+ AS S
Sbjct: 284 NLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCS 343
Query: 374 GHR 376
+
Sbjct: 344 SDK 346
Score = 41 (19.5 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIF 87
+ WS D + T+ DK++ ++
Sbjct: 111 LHWSTDSNEIYTACTDKSIGVW 132
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 116 (45.9 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 41/167 (24%), Positives = 69/167 (41%)
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP + G + + + ++ D+ + L + G V +F + NY+ TG D
Sbjct: 353 FSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA-DRT 410
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+ V +++ + + F P+GR L TG DG V ++D+ G +
Sbjct: 411 VRLWDVLNGNCV--RIFTGHKGPIHSLTFS--PNGRFLATGATDGRVLLWDIGHGLMVGE 466
Query: 350 FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDD----FEDLHLSGDE 392
+ DTV F + AS S + D FEDL +
Sbjct: 467 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDNSQ 513
Score = 64 (27.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD + L+SSED T+R++SL
Sbjct: 308 GASFSPDRNYLLSSSEDGTVRLWSL 332
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 164 YRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA 222
+RA A I +VAFN +G+ G Y+++ +++D G E+ TL+G++
Sbjct: 85 FRALQA--HILPLTNVAFNKSGSCFITGSYDRTCKIWDT-ASG---EELHTLEGHRN--- 135
Query: 223 GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ AIAF+ + +A GS+ +T ++ + + Y G + + F+ + T
Sbjct: 136 -VVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVAT 194
Query: 283 GGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQ 342
G D WD+ +V + H + I +G L TG D ++D+
Sbjct: 195 GSM-DTTAKLWDVESGEEVS----TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVP 249
Query: 343 TGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE 384
+G+ + ++ F+ + A++S + V D E
Sbjct: 250 SGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAE 291
Score = 122 (48.0 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192
++P A+ + D LW A TG T+R + A EI +AFNP T + G
Sbjct: 143 NNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTA--EIVC---LAFNPQSTLVATGSM 197
Query: 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252
+ + +++DV G E+ STL G+ A I+S + F+ T L GS+ T+ ++
Sbjct: 198 DTTAKLWDVES-G---EEVSTLAGHF---AEIIS-LCFNTTGD-RLVTGSFDHTAILWDV 248
Query: 253 DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
+ ++VL G G ++ VQF+ D + + T D WD
Sbjct: 249 PSGRKVHVLSGHRGEISCVQFNWDCSLIATASL-DKSCKVWD 289
Score = 54 (24.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 45 RTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIF 87
R ++ + + +P L + ++ GS F+T S D+T +I+
Sbjct: 80 RKFYLFRALQAHILP---LTNVAFNKSGSCFITGSYDRTCKIW 119
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 132 (51.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
+A+NPTGT + + G ++ +R++ G + S L EG + +A+SP
Sbjct: 22 LAWNPTGTLLASCGGDRKIRIWGTE--GDSWICKSVLS---EGHQRTVRKVAWSPCGN-Y 75
Query: 238 LAIGSYSQTSAIYR--EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA S+ T+ I++ +D+ E + L G E V V ++ GN L T R D + W++
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 296 RKAVQVVYKLYRSSEHTNQRILFDI-EPSGRHLGTGGQDGLVHIYDLQTGKWI--SGFQA 352
+ + +S HT Q + + PS L + D V +Y + W+ + +
Sbjct: 135 DEEDEYECVSVLNS-HT-QDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEG 192
Query: 353 AADTVNGFSFHPFLPMAASSSGHR 376
TV +F P AS S R
Sbjct: 193 HESTVWSIAFDPSGQRLASCSDDR 216
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 133 (51.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 65/262 (24%), Positives = 114/262 (43%)
Query: 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE 111
+F + S P N G+ WSP G+ ++ D+T++I+ G+S + A S A ++
Sbjct: 55 RFASHSAPVN---GVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFD 111
Query: 112 AS--LVVTEGESVYDFCW----------FPHM-----SAS-DPTSCVFASTTRDHPIHLW 153
++ L++T + W F SA P + A+ + D + ++
Sbjct: 112 STGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIY 171
Query: 154 DATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA--GYNKSVRVFDVHRPGRDFEKY 211
D +G C R + +E A +A++P G + G N+ +++FDV G +
Sbjct: 172 DVDSG--ECV-RTF--TEERAAPRQLAWHPWGNMLAVALGCNR-IKIFDVS--GSQLLQL 223
Query: 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271
+ + ++ +AF P+ +L+ GS +T I +Y L G V V
Sbjct: 224 YVV------HSAPVNDVAFHPSGHFLLS-GSDDRTIRILDLLEGRPIYTLTGHTDAVNAV 276
Query: 272 QFSRDGNYLYTGGRKDPYILCW 293
FSRDG+ TGG D +L W
Sbjct: 277 AFSRDGDKFATGG-SDRQLLVW 297
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 133 (51.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 64/268 (23%), Positives = 110/268 (41%)
Query: 127 WFPHMSASDPTSCVFAST-TRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H SC+ +T D I +W+ TGLL + D V +++ F P
Sbjct: 111 WLRHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPN 164
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 165 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 216
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 217 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTSVIMWDPYTGERLR 275
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
Q+ + S H + P G +L T D L+ I+ L+ + A A
Sbjct: 276 SLHHTQLEAPVDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALE----LKAPVAFA 331
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 332 PMTNGLCCTFFPHGGVIATGTRDGHVQF 359
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 136 (52.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G+++ +G D I WD+R
Sbjct: 76 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL-DTDIKLWDVR 134
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ ++K Y+S HT P G+ L + D V ++DL GK + F
Sbjct: 135 RK-GCIFK-YKS--HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 190
Query: 357 VNGFSFHPFLP-MAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADG 411
VN FHP + + AS S D E H+ +C+ + ++ N DG
Sbjct: 191 VNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV---SCIEEEATPVRCILFNPDG 243
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 136 (52.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
++ GS S + ++ + ++L L G + + + F G+++ +G D I WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL-DTDIKLWDVR 135
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT 356
+ ++K Y+S HT P G+ L + D V ++DL GK + F
Sbjct: 136 RK-GCIFK-YKS--HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 357 VNGFSFHPFLP-MAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADG 411
VN FHP + + AS S D E H+ +C+ + ++ N DG
Sbjct: 192 VNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV---SCIEEEATPVRCILFNPDG 244
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 129 (50.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 219 EGQAGIMSAIAFSPT-HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277
+G G + +AF P H A S+ QT+ ++ D++ L V G V V F +
Sbjct: 418 KGHTGPVWDVAFGPFGH--YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNS 475
Query: 278 NYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVH 337
Y+ TG D WD+ + V +++ HT I P G + + +GL+H
Sbjct: 476 AYVLTGS-SDKTCRLWDVHRGHSV--RVFNG--HTQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 338 IYDLQTGKWISGFQAAADTVNGFSF 362
++D+ TG+ I + + SF
Sbjct: 531 LWDIGTGRRIKTMRGHRGNIYSLSF 555
Score = 51 (23.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD L+ SED + R++S+
Sbjct: 384 GTTFSPDNKYLLSCSEDASARLWSV 408
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/191 (23%), Positives = 82/191 (42%)
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
+G A + + SP ++ A GS+ +T+ ++ D L + G V V+F + N
Sbjct: 381 QGHAYPVWDLDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 279 YLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
YL TG D + W ++ V +L+ H + P+G++L + G+D + +
Sbjct: 440 YLATGST-DKTVRLWSAQQGNSV--RLFTG--HRGPVLSLAFSPNGKYLASAGEDQRLKL 494
Query: 339 YDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGD-ENCVSV 397
+DL +G + D + +F P + AS+S V D + + S + S
Sbjct: 495 WDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSE 554
Query: 398 WSFLYASMMEN 408
+Y M N
Sbjct: 555 LVGVYTGQMSN 565
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/202 (27%), Positives = 95/202 (47%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
VA+NP GT + + G ++++R++ R G +E + L+ +G + +A+SP
Sbjct: 22 VAWNPKGTLLASCGGDRTIRIWG--REGDSWECKTVLQ---DGHQRTVRKVAWSPCGN-Y 75
Query: 238 LAIGSYSQTSAIYRE--DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA S+ T+ I+++ D+ E L VL G E V V ++ GN L T R D + W++
Sbjct: 76 LASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSR-DKSVWIWEV 134
Query: 296 RKAVQVVYKLYRS-SEHTNQRILFDI-EPSGRHLGTGGQDGLVHIYDLQTGKWI--SGFQ 351
+ + Y+ + HT Q + + P+ L + D V +Y + W + +
Sbjct: 135 DEENE--YECVSVVNSHT-QDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLE 191
Query: 352 AAADTVNGFSFHPFLPMAASSS 373
TV G +F P AS S
Sbjct: 192 GHTSTVWGLTFDPSGQRLASCS 213
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
+A+NP+GT + + G ++ +R++ G + S L EG + +A+SP
Sbjct: 22 LAWNPSGTLLASCGGDRKIRIWGTE--GDSWICKSVLS---EGHQRTVRKVAWSPCGN-Y 75
Query: 238 LAIGSYSQTSAIYR--EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA S+ T+ I++ +D+ E + L G E V V ++ GN L T R D + W++
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 296 RKAVQVVYKLYRSSEHTNQRILFDI-EPSGRHLGTGGQDGLVHIYDLQTGKWI--SGFQA 352
+ + SS HT Q + + PS L + D V +Y + W+ + +
Sbjct: 135 DEEDEYECVSVLSS-HT-QDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEG 192
Query: 353 AADTVNGFSFHPFLPMAASSSGHR 376
TV +F P AS S R
Sbjct: 193 HESTVWSIAFDPSGQRLASCSDDR 216
>ZFIN|ZDB-GENE-050809-116 [details] [associations]
symbol:dcaf11 "ddb1 and cul4 associated factor 11"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050809-116 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:80344 HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801
OrthoDB:EOG44TP7K InterPro:IPR017399 PIRSF:PIRSF038135
GeneTree:ENSGT00700000104507 OMA:RMLHQRE EMBL:CR405710
EMBL:BC099999 IPI:IPI00491931 RefSeq:NP_001026845.1
UniGene:Dr.134153 STRING:Q499B0 Ensembl:ENSDART00000002992
GeneID:567578 KEGG:dre:567578 InParanoid:Q499B0 NextBio:20888741
Uniprot:Q499B0
Length = 541
Score = 112 (44.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 54/187 (28%), Positives = 81/187 (43%)
Query: 119 GESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA-VDEIT-AA 176
G S+ D C+ P CV S+ D+ IH+ T+ A D DE
Sbjct: 222 GWSILDVCFTPD------ARCVLYSSWSDY-IHVCSVDGD--NETHTALDLNPDERRFCV 272
Query: 177 FSVAFNPTGTKIFAGYNKS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT 235
FS+A + G +I G N + VFD R+ K TLK + ++A+AF+ + +
Sbjct: 273 FSLAASTDGKEILGGANDGCLYVFD-----REQNK-RTLK--IDAHEDDVNAVAFADSSS 324
Query: 236 GMLAIGSYSQTSAIY-----REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290
+L GS ++ RED + + L G G+T + D YL + KD I
Sbjct: 325 QLLFSGSDDALCKVWDRRTLREDRPQPVGHLAGHRDGITFIHSKGDARYLISNS-KDQTI 383
Query: 291 LCWDLRK 297
WD+RK
Sbjct: 384 KLWDVRK 390
Score = 60 (26.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 22/65 (33%), Positives = 29/65 (44%)
Query: 311 HTNQRILFDIEPS-G-RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPM 368
HT R F E S G + + TG G + IYD+ TG + V S+HP+
Sbjct: 442 HTLIRCRFSPEFSTGQKFIYTGCSTGKIVIYDVLTGSVVCKLSNHDACVRDVSWHPYNNN 501
Query: 369 AASSS 373
SSS
Sbjct: 502 MVSSS 506
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 6/20 (30%), Positives = 16/20 (80%)
Query: 68 WSPDGSSFLTSSEDKTLRIF 87
+S +G+ FL++ +D+ +R++
Sbjct: 184 YSDEGNMFLSACQDQNIRLY 203
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/268 (24%), Positives = 111/268 (41%)
Query: 127 WFPHMSASDPTSCVFAST-TRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H SC+ +T D I +W+ TGLL + D V +++ F P+
Sbjct: 111 WARHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPS 164
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 165 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 216
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 217 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTNVIMWDPYTGERLR 275
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
Q+ + S H + P G +L T D L+ I+ L+ I A A
Sbjct: 276 SLHHTQLSPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPI----AFA 331
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 332 PMTNGLCCTFFPHGGVIATGTRDGHVQF 359
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 178 SVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
+VA N G+ G Y+++ +V+D G E+ TL+G++ ++ AIAF+ +
Sbjct: 97 NVALNKAGSCFITGSYDRTCKVWDT-ASG---EELHTLEGHRN----VVYAIAFNNPYGD 148
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
+A GS+ +T ++ + + + G + + F+ + TG D WD++
Sbjct: 149 KIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSM-DTTAKLWDIQ 207
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGK 345
+VV + H + I + SG + TG D V ++D TG+
Sbjct: 208 SGEEVV----TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGR 252
Score = 110 (43.8 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 44/187 (23%), Positives = 81/187 (43%)
Query: 179 VAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
++FNP T + G + + +++D+ + G E+ TL G+ A I+S ++F T
Sbjct: 183 LSFNPQSTVVATGSMDTTAKLWDI-QSG---EEVVTLTGHL---AEIIS-LSFD-TSGDR 233
Query: 238 LAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297
+ GS+ T ++ ++ L G ++ FS D + + TG D + WD
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSM-DKTCMLWDATS 292
Query: 298 AVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTV 357
V E + FD +G+ + T DG +Y+ T K I+ + +
Sbjct: 293 GKCVATLTGHDDEILDS--CFDY--TGKLIATASADGTARVYNATTRKCITKLEGHEGEI 348
Query: 358 NGFSFHP 364
+ SF+P
Sbjct: 349 SKISFNP 355
Score = 109 (43.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPG 205
DH + +WDA+TG R + EI++A F+ + I G +K+ ++D G
Sbjct: 240 DHTVVVWDASTG--RKVHTLIGHCAEISSAL---FSWDCSLILTGSMDKTCMLWDA-TSG 293
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDNMELLYVLHGQ 264
+ +TL G+ + I+ + F +TG ++A S T+ +Y + + L G
Sbjct: 294 KCV---ATLTGHDDE---ILDS-CFD--YTGKLIATASADGTARVYNATTRKCITKLEGH 344
Query: 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSG 324
EG ++ + F+ GN L TG D WD++ Q + L HT++ G
Sbjct: 345 EGEISKISFNPQGNRLLTGS-SDKTARIWDVQTG-QCLQVL---EGHTDEIFSCAFNYKG 399
Query: 325 RHLGTGGQDGLVHIY 339
+ TG +D I+
Sbjct: 400 NIVITGSKDNSCRIW 414
Score = 48 (22.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 44 HRTYHFY--NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIF 87
H ++FY R +P L + + GS F+T S D+T +++
Sbjct: 77 HCDHNFYLFKVLRAHILP---LTNVALNKAGSCFITGSYDRTCKVW 119
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 124 (48.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 141 FA-STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRV 198
FA S + D + LWD TG T R + V SVAF+ +I A ++++++
Sbjct: 77 FALSGSWDGELRLWDLATGE---TTRRF--VGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP-THTGMLAIGSYSQTSAIYREDNMEL 257
++ G KY+ +G +G +S + FSP T + S+ +T ++ N +L
Sbjct: 132 WNTL--GEC--KYTISEG--DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL 185
Query: 258 LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSS 309
L G G + V S DG+ +GG KD IL WDL + ++ Y L S
Sbjct: 186 RNSLVGHSGYLNTVAVSPDGSLCASGG-KDGVILLWDLAEGKKL-YSLEAGS 235
Score = 46 (21.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 18 DTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLT 77
++++ A ++ W L + D ++Y + T ++F++ + S DG L+
Sbjct: 27 NSDIIVTASRDKSIILWKLTKDD----KSYGVAQRRLTGH--SHFVEDVVLSSDGQFALS 80
Query: 78 SSEDKTLRIFSL 89
S D LR++ L
Sbjct: 81 GSWDGELRLWDL 92
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 66/266 (24%), Positives = 99/266 (37%)
Query: 122 VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITA-AFSVA 180
VY W P + S ++D + +W+A T + T+ A+ A + A
Sbjct: 68 VYSLDWTPERNR-------IVSASQDGRLIVWNALTS--QKTH----AIKLPCAWVMTCA 114
Query: 181 FNPTGTKIFAGYNKSV-RVFDVHRPGRDFEKYSTLKGNK--EGQAGIMSAIAFSPTHTGM 237
F+P G + G SV +F + +K T+ ++ G G +S + P
Sbjct: 115 FSPNGQSVACGGLDSVCSIFSLSSTA---DKDGTVPVSRMLTGHRGYVSCCQYVPNEDAH 171
Query: 238 LAIGSYSQTSAIYREDNMELLYVLHGQ-EGG----VTHVQFSRDGNYLYTGGRKDPYILC 292
L S QT ++ V G+ + G V V S + G D
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARL 231
Query: 293 WDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQA 352
WD R A + V + N F P G GTG DG +YD++TG + +Q
Sbjct: 232 WDTRAASRAVRTFHGHEGDVNTVKFF---PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQP 288
Query: 353 AADTVNGFSFHPFLPMAASSSGHRRF 378
D NG P +A S SG F
Sbjct: 289 HGDGENG----PVTSIAFSVSGRLLF 310
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 65/268 (24%), Positives = 111/268 (41%)
Query: 127 WFPHMSASDPTSCVFAST-TRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H SC+ +T D I +W+ TGLL + D V +++ F P+
Sbjct: 113 WARHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPS 166
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 167 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 218
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 219 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTNVIMWDPYTGERLR 277
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
Q+ + S H + P G +L T D L+ I+ L+ I A A
Sbjct: 278 SLHHTQLNPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPI----AFA 333
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 334 PMTNGLCCTFFPHGGVIATGTRDGHVQF 361
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 55/206 (26%), Positives = 86/206 (41%)
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS 195
P + S + D I +W AT + + A +T ++ N +G I + + S
Sbjct: 261 PDNITAISASADSHIRVWSATDSSSKAIIDVHQA--PVT---DISLNASGDYILSASDDS 315
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML-AIGSYSQTSAIYREDN 254
F R G+ K S G+ Q + S I F P G++ G+ I+ N
Sbjct: 316 YWAFSDIRSGKSLCKVSVEPGS---QIAVHS-IEFHPD--GLIFGTGAADAVVKIWDLKN 369
Query: 255 MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ G V + FS +G YL TG +D + WDLRK + K + + E
Sbjct: 370 QTVAAAFPGHTAAVRSIAFSENGYYLATGS-EDGEVKLWDLRKLKNL--KTFANEEKQPI 426
Query: 315 RIL-FDIEPSGRHLGTGGQD-GLVHI 338
L FD+ +G LG GGQ ++H+
Sbjct: 427 NSLSFDM--TGTFLGIGGQKVQVLHV 450
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/171 (23%), Positives = 76/171 (44%)
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
+G A + + SP ++ A GS+ +T+ ++ D L + G V V+F + N
Sbjct: 399 QGHAYPVWDLDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 457
Query: 279 YLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
YL TG D + W ++ V +L+ H + P+G++L + G+D + +
Sbjct: 458 YLATGST-DKTVRLWSAQQGNSV--RLFTG--HRGPVLSLAFSPNGKYLASAGEDQRLKL 512
Query: 339 YDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLS 389
+DL +G + D + +F P + AS+S V D + + S
Sbjct: 513 WDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCS 563
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 121 (47.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 41/161 (25%), Positives = 69/161 (42%)
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP + G + + + ++ D+ + L + G VT +F + NY+ TG D
Sbjct: 573 FSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSA-DRT 630
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+ V +++ + + F P+GR L TG DG V ++D+ G +
Sbjct: 631 VRLWDVLNGNCV--RIFTGHKGPIHSLAFS--PNGRFLATGATDGRVLLWDIGHGLMVGE 686
Query: 350 FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDD----FEDL 386
+ DT+ F + AS S + D FEDL
Sbjct: 687 LKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDL 727
Score = 59 (25.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD + L+ SED T+R++SL
Sbjct: 528 GTSFSPDRNYLLSCSEDGTVRLWSL 552
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 58/249 (23%), Positives = 105/249 (42%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIF--SLPENGISYDVNACSLAKDQDSYEASLVVTEGESVY 123
+++SP +SS DKT+R++ S+ + + + S+ S + ++T +
Sbjct: 66 VQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQS 125
Query: 124 DFCWFPHM----------------SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167
W H + P + S + D + LWDA++ L T+
Sbjct: 126 IKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEP 185
Query: 168 DAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226
V F+P+ T I A + +VRV+D+ + TL + + + ++
Sbjct: 186 GGYSSY-----VDFHPSSTCIATASSDNTVRVWDI--------RTHTLLQHYQVHSAAVN 232
Query: 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
A++F P+ +L S S + D +E LLY LHG +G + V FSR G+ + G
Sbjct: 233 ALSFHPSGNHLLTASSDSTLKIL---DLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAG 289
Query: 285 RKDPYILCW 293
D ++ W
Sbjct: 290 -SDQQVMVW 297
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 43/171 (25%), Positives = 73/171 (42%)
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
+G A + + SP H+ A SY T+ ++ D L + G GV V+F + N
Sbjct: 378 QGHAYPVWDLDISP-HSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSN 436
Query: 279 YLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
YL TG D + W ++ V +L+ H P+G++L + G+D L+ +
Sbjct: 437 YLATGST-DKTVRLWSAQQGNSV--RLFTG--HCGPVRCLAFSPNGQYLVSAGEDQLLKL 491
Query: 339 YDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLS 389
+DL +G D + +F + AS+S + D + H S
Sbjct: 492 WDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNS 542
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 123 (48.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 50/172 (29%), Positives = 79/172 (45%)
Query: 141 FA-STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRV 198
FA S + D + LWD TG T R ++ SVAF+ +I A ++++++
Sbjct: 77 FALSGSWDGELRLWDLATG--ESTRRFVGHTKDV---LSVAFSTDNRQIVSASRDRTIKL 131
Query: 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP-THTGMLAIGSYSQTSAIYREDNMEL 257
++ G S G+KE +S + FSP T + S+ +T ++ N +L
Sbjct: 132 WNTL--GECKYTISEADGHKEW----VSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL 185
Query: 258 LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSS 309
L G G + V S DG+ +GG KD IL WDL + ++ Y L S
Sbjct: 186 RNTLAGHSGYLNTVAVSPDGSLCASGG-KDGVILLWDLAEGKKL-YSLEAGS 235
Score = 45 (20.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 18 DTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLT 77
+++V + ++ W L + D ++Y + T ++F++ + S DG L+
Sbjct: 27 NSDVIVTSSRDKSIILWKLTKED----KSYGVAQRRMTGH--SHFVQDVVLSSDGQFALS 80
Query: 78 SSEDKTLRIFSL 89
S D LR++ L
Sbjct: 81 GSWDGELRLWDL 92
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 71 DGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCW 127
D S + TSS DK++ ++ L + SY V + + ++ ++G+ W
Sbjct: 26 DNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSW 83
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 127 (49.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 49/223 (21%), Positives = 98/223 (43%)
Query: 140 VFASTTRDHPIHLW--DATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK-IFAGYNK-S 195
+FA+ +D + +W D ++G + C + A S+A + + + +G +
Sbjct: 400 MFATCAKDKSVRVWRMDVSSGRVHCVAQG---TGHSNAVGSIACSRMKQQFVVSGSQDCT 456
Query: 196 VRVFDV-HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254
V+V+D+ G + + + ++++ SP +LA GS +T+ ++ +
Sbjct: 457 VKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDK-LLASGSQDRTAKLWALSD 515
Query: 255 MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ 314
+ LL V G GV VQFS L + D + W ++ + K + + +
Sbjct: 516 LRLLGVCRGHRRGVWSVQFSPVDQILGSASA-DGSVRIWSIQDFSCL--KTFEGHDASVL 572
Query: 315 RILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTV 357
+I+F G L + G DGLV ++ ++T + + A D V
Sbjct: 573 KIIF--VSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKV 613
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 55/228 (24%), Positives = 102/228 (44%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191
A P + S +R + WD R R++ AV + A S++F+ T T + G
Sbjct: 70 ALSPDDEMLVSASRALLLRQWDWKQQQCR---RSWRAVHSVPVA-SMSFDCTSTLLATGG 125
Query: 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSA-IY 250
+ +++++DV ++Y T N +G +G++ + F P + + S S + I+
Sbjct: 126 CDGTIKLWDV------IKQYCT--HNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIW 177
Query: 251 REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK-----------AV 299
+ + VL VT + FS DG+ L + GR D WDL++ AV
Sbjct: 178 DLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGR-DKICSVWDLQEQKVKRTIPVYEAV 236
Query: 300 QVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWI 347
+ V L S++++ + D HL T G G++ ++D + + +
Sbjct: 237 EGVVLLSGSADYSEMGVKSD----ALHLVTAGSKGVLRVWDSSSSRCV 280
Score = 53 (23.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/102 (25%), Positives = 38/102 (37%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGIS-----YD-VNACSLAKDQDSY-------EA 112
+ +SPDG + ++S DK ++ L E + Y+ V L Y +A
Sbjct: 198 LAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDA 257
Query: 113 SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWD 154
+VT G W S + CVF T D H D
Sbjct: 258 LHLVTAGSKGVLRVW-----DSSSSRCVFTQTLPDASSHTED 294
Score = 43 (20.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 72 GSSFLTSSEDKTLRIFSL 89
GS F T ++DK++R++ +
Sbjct: 398 GSMFATCAKDKSVRVWRM 415
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 115 (45.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 41/161 (25%), Positives = 68/161 (42%)
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP + G + + + ++ D+ + L + G V +F + NY+ TG D
Sbjct: 591 FSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA-DRT 648
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+ V +++ + + F P+GR L TG DG V ++D+ G +
Sbjct: 649 VRLWDVLNGNCV--RIFTGHKGPIHSLTFS--PNGRFLATGATDGRVLLWDIGHGLMVGE 704
Query: 350 FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDD----FEDL 386
+ DTV F + AS S + D FEDL
Sbjct: 705 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDL 745
Score = 64 (27.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD + L+SSED T+R++SL
Sbjct: 546 GASFSPDRNYLLSSSEDGTVRLWSL 570
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/189 (24%), Positives = 83/189 (43%)
Query: 179 VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML 238
V F+ G + G N+S ++FDV G++ +K G I S + FSP L
Sbjct: 275 VRFSRDGKYLATGCNRSAQIFDVTL-GQNVAVLQDESVDKSGDLYIRS-VCFSPDGK-YL 331
Query: 239 AIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298
A G+ + ++ + ++ G E + + F+ +G Y+ +G D + WD+ +
Sbjct: 332 ATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG-DKTVRLWDIAEG 390
Query: 299 VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQ---AAAD 355
++VY L S E + + P G ++ G D V ++D TG + + D
Sbjct: 391 -KLVYTL--SIEDGVTTVA--MSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKD 445
Query: 356 TVNGFSFHP 364
+V +F P
Sbjct: 446 SVYSVAFAP 454
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 115 (45.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 41/161 (25%), Positives = 68/161 (42%)
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP + G + + + ++ D+ + L + G V +F + NY+ TG D
Sbjct: 593 FSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA-DRT 650
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+ V +++ + + F P+GR L TG DG V ++D+ G +
Sbjct: 651 VRLWDVLNGNCV--RIFTGHKGPIHSLTFS--PNGRFLATGATDGRVLLWDIGHGLMVGE 706
Query: 350 FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDD----FEDL 386
+ DTV F + AS S + D FEDL
Sbjct: 707 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDL 747
Score = 64 (27.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD + L+SSED T+R++SL
Sbjct: 548 GASFSPDRNYLLSSSEDGTVRLWSL 572
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 115 (45.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 41/161 (25%), Positives = 68/161 (42%)
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP + G + + + ++ D+ + L + G V +F + NY+ TG D
Sbjct: 594 FSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA-DRT 651
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+ V +++ + + F P+GR L TG DG V ++D+ G +
Sbjct: 652 VRLWDVLNGNCV--RIFTGHKGPIHSLTFS--PNGRFLATGATDGRVLLWDIGHGLMVGE 707
Query: 350 FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDD----FEDL 386
+ DTV F + AS S + D FEDL
Sbjct: 708 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDL 748
Score = 64 (27.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD + L+SSED T+R++SL
Sbjct: 549 GASFSPDRNYLLSSSEDGTVRLWSL 573
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 61/244 (25%), Positives = 100/244 (40%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT--KIFA 190
A+ P+ + AS++ D + ++D T T +A + + + F P GT +
Sbjct: 67 AAHPSGIIAASSSIDSFVRVFDVDTN---ATIAVLEAPP--SEVWGMQFEPKGTILAVAG 121
Query: 191 GYNKSVRVFDVHR---------PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG 241
G + SV+++D P D K S +K+ + ++A+SP LA G
Sbjct: 122 GSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKK----FVLSVAWSPNGK-RLACG 176
Query: 242 SYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSR-DGNYLYTGGRKDPYILCWDLRKAVQ 300
S T ++ D +LL+ L G V + FS D L++G D ++ D
Sbjct: 177 SMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS-DDGHVNMHDAEGKTL 235
Query: 301 VVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGF 360
L S HT+ + D P G + TG D V ++DL+ I D V
Sbjct: 236 ----LGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSV 291
Query: 361 SFHP 364
+F P
Sbjct: 292 AFRP 295
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 92 (37.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 228 IAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287
+ FSP + M+A + + ++ + + + L G V FS D L T KD
Sbjct: 419 VTFSPDGS-MIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTAS-KD 476
Query: 288 PYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
+ W++R ++ L H ++ D P G+ +G+GG+D V ++
Sbjct: 477 TTLKVWNVRTG-KLATDL---PGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 84 (34.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
G+ WSPDG+ T S DKT+RI+ PE G
Sbjct: 200 GVSWSPDGTRLATCSMDKTVRIWD-PETG 227
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 51/195 (26%), Positives = 90/195 (46%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
R + A+ A ++AF+PT T + G + +VRV+D+ R Y T + G G
Sbjct: 10 RLWKAIHTAPVA-TMAFDPTSTLLATGGCDGAVRVWDIVR------HYGT--HHFRGSPG 60
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ +AF P T +L S + + ++ + L VL VT + FS DG+ + +
Sbjct: 61 VVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLS 120
Query: 283 GGRKDPYILCWDLR--KAVQVVYKLYRSSEHTNQRILFDIEP--------SGRHLGTGGQ 332
GR D + WDL+ +A + V ++ S E +L EP G + T G
Sbjct: 121 SGR-DKICIIWDLQSCQATRTV-PVFESVEAA---VLLPEEPVSQLGVKSPGLYFLTAGD 175
Query: 333 DGLVHIYDLQTGKWI 347
G + +++ +G+ +
Sbjct: 176 QGTLRVWEAASGQCV 190
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 128 (50.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 64/299 (21%), Positives = 115/299 (38%)
Query: 118 EGES--VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITA 175
+G S VY W P + S ++D + +W+A T + + +
Sbjct: 63 QGHSGKVYSLDWTPEKNW-------IVSASQDGRLIVWNALT-----SQKTHAIKLHCPW 110
Query: 176 AFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH 234
+ AF P G + G + + +F+++ D + + G G +S+ + P
Sbjct: 111 VMTCAFAPNGQSVACGGLDSACSIFNLNSQA-DRDGNIPVSRILTGHKGYVSSCQYVPDQ 169
Query: 235 TGMLAIGSYSQTSAIYREDNMELLYVLHGQ-EGG----VTHVQFSRDGNYLYTGGRKDPY 289
L S QT ++ + + + G+ G V + + + ++ G D
Sbjct: 170 ETRLITSSGDQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDAT 229
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+R A + V + Y E + F P G+ GTG DG ++D++TG +
Sbjct: 230 VRLWDIRIASRAV-RTYHGHEGDINSVKFF--PDGQRFGTGSDDGTCRLFDVRTGHQLQV 286
Query: 350 FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMEN 408
+ D N +A S SG F + +GD C VW L A ++ N
Sbjct: 287 YSREPDR-NDNELPTVTSIAFSISGRLLFAG------YSNGD--CY-VWDTLLAEVVLN 335
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 65/268 (24%), Positives = 111/268 (41%)
Query: 127 WFPHMSASDPTSCVFAST-TRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPT 184
W H SC+ +T D I +W+ TGLL + D V +++ F P+
Sbjct: 113 WARHHPQVPDISCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLS------FTPS 166
Query: 185 GTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
G+ I A +K++R++D+++ G+ + L G+ + + + SP ML +
Sbjct: 167 GSLILVSASRDKTLRIWDLNKHGKQIQ---VLSGHLQW----VYCCSISPD-CSMLCSAA 218
Query: 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD------LR 296
++ ++ + L+ L G + V FS D L T D ++ WD LR
Sbjct: 219 GEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY-DTNVIMWDPYTGERLR 277
Query: 297 KA--VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
Q+ + S H + P G +L T D L+ I+ L+ I A A
Sbjct: 278 LLHHTQLDPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPI----AFA 333
Query: 355 DTVNGF--SFHPFLPMAASSS--GHRRF 378
NG +F P + A+ + GH +F
Sbjct: 334 PMTNGLCCTFFPHGGVIATGTRDGHVQF 361
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 51/195 (26%), Positives = 90/195 (46%)
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
R + A+ A ++AF+PT T + G + +VRV+D+ R Y T + G G
Sbjct: 102 RLWKAIHTAPVA-TMAFDPTSTLLATGGCDGAVRVWDIVR------HYGT--HHFRGSPG 152
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ +AF P T +L S + + ++ + L VL VT + FS DG+ + +
Sbjct: 153 VVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLS 212
Query: 283 GGRKDPYILCWDLR--KAVQVVYKLYRSSEHTNQRILFDIEP--------SGRHLGTGGQ 332
GR D + WDL+ +A + V ++ S E +L EP G + T G
Sbjct: 213 SGR-DKICIIWDLQSCQATRTV-PVFESVEAA---VLLPEEPVSQLGVKSPGLYFLTAGD 267
Query: 333 DGLVHIYDLQTGKWI 347
G + +++ +G+ +
Sbjct: 268 QGTLRVWEAASGQCV 282
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/211 (23%), Positives = 84/211 (39%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WDA T T + + T + A+ P+G + G + V V+
Sbjct: 87 SSSQDGRLIIWDAFT-----TNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVY-- 139
Query: 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261
P E+ + K MS + P + GS T A++ ++ +LL
Sbjct: 140 --PITSDEEMAAKKRTVGTHTSYMSCCIY-PNSDQQILTGSGDSTCALWDVESGQLLQSF 196
Query: 262 HGQEGGVTHVQFSRD--GNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFD 319
HG G V + + + GN + G D WD+R VV N + F
Sbjct: 197 HGHSGDVMAIDLAPNETGN-TFVSGSCDRMAFIWDMRSG-HVVQSFEGHQSDVNS-VKF- 252
Query: 320 IEPSGRHLGTGGQDGLVHIYDLQTGKWISGF 350
P G + TG D +YD++ + ++ F
Sbjct: 253 -HPCGDAIATGSDDSSCRLYDMRADREVAVF 282
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 69/298 (23%), Positives = 120/298 (40%)
Query: 68 WSPDGSSFLTSSEDKTLRIFSL----PENGISYD---VNACSLAKDQDSYEASLVVTEGE 120
WSPD ++SS+D L I+ E+ ++ + AC+ A ++ A +
Sbjct: 78 WSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPS-GNFVACGGLDNKV 136
Query: 121 SVYDFCWFPHMSASDPT---------SCVFASTTR-------DHPIHLWDATTGLLRCTY 164
+VY M+A T C++ ++ + D LWD +G L ++
Sbjct: 137 TVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSF 196
Query: 165 RAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG 223
+ D + A +A N TG +G ++ ++D+ R G + + EG
Sbjct: 197 HGHSG-DVM--AIDLAPNETGNTFVSGSCDRMAFIWDM-RSGHVVQSF-------EGHQS 245
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIY--REDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281
++++ F P +A GS + +Y R D ++ GV V FS G L+
Sbjct: 246 DVNSVKFHPCGDA-IATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLF 304
Query: 282 TGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
G D + WD K+ +V LY H N+ + P G L TG D + ++
Sbjct: 305 AG-YNDYTVNLWDTLKSERVCL-LYG---HENKVSCVQVSPDGTALSTGSWDYTIRVW 357
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 114 (45.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 36/144 (25%), Positives = 62/144 (43%)
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP + G + + + ++ D+ + L + G V +F + NY+ TG D
Sbjct: 593 FSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA-DRT 650
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+ V +++ + + F P+GR L TG DG V ++D+ G +
Sbjct: 651 VRLWDVLNGNCV--RIFTGHKGPIHSLTFS--PNGRFLATGATDGRVLLWDIGHGLMVGE 706
Query: 350 FQAAADTVNGFSFHPFLPMAASSS 373
+ DTV F + AS S
Sbjct: 707 LKGHTDTVCSLRFSRDGEILASGS 730
Score = 64 (27.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD + L+SSED T+R++SL
Sbjct: 548 GASFSPDRNYLLSSSEDGTVRLWSL 572
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/169 (22%), Positives = 79/169 (46%)
Query: 178 SVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236
+VA N +G+ G Y+++ +++D G E+ TL+G++ ++ AIAF+ +
Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDT-ASG---EELHTLEGHRN----VVYAIAFNNPYGD 148
Query: 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
+A GS+ +T ++ + + + G + + F+ + TG D WD++
Sbjct: 149 KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSM-DTTAKLWDIQ 207
Query: 297 KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGK 345
+V + + H+ + I SG + TG D V +++ TG+
Sbjct: 208 SGEEV----FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGR 252
Score = 120 (47.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 43/159 (27%), Positives = 77/159 (48%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN-PTGTKIFAG-YNKS 195
SC F + + D LWD +G T + V +++AFN P G KI G ++K+
Sbjct: 105 SC-FITGSYDRTCKLWDTASGEELHTLEGHRNV-----VYAIAFNNPYGDKIATGSFDKT 158
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
+++ V G+ Y T +G+ A I+ ++F+P T ++A GS T+ ++ +
Sbjct: 159 CKLWSVET-GKC---YHTFRGHT---AEIV-CLSFNPQST-LVATGSMDTTAKLWDIQSG 209
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
E ++ L G + + F+ GN + TG D + W+
Sbjct: 210 EEVFTLTGHSAEIISLSFNTSGNRIITGSF-DHTVTVWE 247
Score = 112 (44.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 52/195 (26%), Positives = 86/195 (44%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPG 205
DH + +W+A TG R Y EI++A FN + I G +K+ +++D G
Sbjct: 240 DHTVTVWEADTG--RKVYTLIGHCAEISSA---VFNWDCSLILTGSMDKTCKLWDAVN-G 293
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDNMELLYVLHGQ 264
+ +TL G+ + I+ + F +TG ++A S T+ I+ E + L G
Sbjct: 294 KCV---ATLTGHDDE---ILDS-CFD--YTGKLIATASADGTARIFSAATRECVTKLEGH 344
Query: 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSG 324
EG ++ + F+ GN L TG D WD + Q + L HT++ G
Sbjct: 345 EGEISKISFNPQGNRLLTGS-SDKTARIWDAQTG-QCLQVL---EGHTDEIFSCAFNYKG 399
Query: 325 RHLGTGGQDGLVHIY 339
+ TG +D I+
Sbjct: 400 DIIITGSKDNTCRIW 414
Score = 109 (43.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 43/187 (22%), Positives = 81/187 (43%)
Query: 179 VAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
++FNP T + G + + +++D+ + G E+ TL G+ A I+S ++F+ T
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDI-QSG---EEVFTLTGHS---AEIIS-LSFN-TSGNR 233
Query: 238 LAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297
+ GS+ T ++ D +Y L G ++ F+ D + + TG D WD
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSM-DKTCKLWDAVN 292
Query: 298 AVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTV 357
V E + FD +G+ + T DG I+ T + ++ + +
Sbjct: 293 GKCVATLTGHDDEILDS--CFDY--TGKLIATASADGTARIFSAATRECVTKLEGHEGEI 348
Query: 358 NGFSFHP 364
+ SF+P
Sbjct: 349 SKISFNP 355
Score = 108 (43.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192
++P A+ + D LW TG T+R + A EI ++FNP T + G
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTA--EIVC---LSFNPQSTLVATGSM 197
Query: 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252
+ + +++D+ + G E+ TL G+ A I+S ++F+ T + GS+ T ++
Sbjct: 198 DTTAKLWDI-QSG---EEVFTLTGHS---AEIIS-LSFN-TSGNRIITGSFDHTVTVWEA 248
Query: 253 DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
D +Y L G ++ F+ D + + TG D WD
Sbjct: 249 DTGRKVYTLIGHCAEISSAVFNWDCSLILTGSM-DKTCKLWD 289
Score = 50 (22.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 44 HRTYHFY--NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIF 87
H + FY R +P L + + GS F+T S D+T +++
Sbjct: 77 HSNHKFYLFKVLRAHILP---LTNVALNKSGSCFITGSYDRTCKLW 119
Score = 46 (21.3 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 69 SPDGSSFLTSSEDKTLRIFSLPENGISY 96
+P G T S DKT +++S+ E G Y
Sbjct: 144 NPYGDKIATGSFDKTCKLWSV-ETGKCY 170
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 132 (51.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 55/216 (25%), Positives = 86/216 (39%)
Query: 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273
LK G + +A SP H + + G E N + + HG GV ++
Sbjct: 197 LKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHY-HGHLSGVYALKL 255
Query: 274 SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQD 333
+ L T GR D WD+R Q V+ L S H + ++ + TG D
Sbjct: 256 HPTLDVLVTAGR-DAVARVWDMRTR-QNVHVL---SGHKSTVASLAVQEFDPQVVTGSMD 310
Query: 334 GLVHIYDLQTGKWISGFQAAADTVNGFSFHP--FLPMAASSSG--HRRFPVDDFEDLHLS 389
+ ++DL GK ++ TV S HP F + SS H +FP F +
Sbjct: 311 STIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKHWKFPEGAFMG-NFE 369
Query: 390 GDENCVSVWSFLYASMM-ENADGINGCEFNCQSEHE 424
G V+ S ++M AD + C ++ +S H+
Sbjct: 370 GHNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHK 405
Score = 38 (18.4 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 70 PDGSSFLTSSEDKTLRIFSL 89
P F T + D+T++I+ L
Sbjct: 173 PGNQWFCTGAGDRTIKIWDL 192
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 129 (50.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 46/186 (24%), Positives = 78/186 (41%)
Query: 179 VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML 238
V F+ G + G N++ VF+V G+ +EG + S +AFSP L
Sbjct: 305 VRFSADGKFLATGCNRAAMVFNVET-GKLITLLQEESSKREGDLYVRS-VAFSPDGK-YL 361
Query: 239 AIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298
A G Q I+ + +L G E + + FS+DG L +G D + WD+
Sbjct: 362 ATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG-DRTVCLWDVEAG 420
Query: 299 VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVN 358
Q KL ++ ++F P G+ + G D ++ I+ +G + ++V
Sbjct: 421 EQ---KLILHTDDGVTTVMFS--PDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVY 474
Query: 359 GFSFHP 364
+F P
Sbjct: 475 SVAFSP 480
Score = 128 (50.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 61/263 (23%), Positives = 105/263 (39%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY 192
A P A+ D I +WD + YR ++ +S+ F+ G + +G
Sbjct: 353 AFSPDGKYLATGVEDQQIRIWDIAQ---KRVYRLLTGHEQ--EIYSLDFSKDGKTLVSGS 407
Query: 193 -NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251
+++V ++DV G + +G +M FSP +A GS + I+
Sbjct: 408 GDRTVCLWDVEA-GEQ----KLILHTDDGVTTVM----FSPDGQ-FIAAGSLDKVIRIWT 457
Query: 252 EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRS--- 308
L+ LHG E V V FS DG YL +G D I W+L+ V +Y+
Sbjct: 458 SSGT-LVEQLHGHEESVYSVAFSPDGKYLVSGSL-DNTIKLWELQCVSNVAPSMYKEGGI 515
Query: 309 -----SEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFH 363
+ H + + + P G+ + +G +D + + + Q ++V +
Sbjct: 516 CKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVS 575
Query: 364 PFLPMAASSSGHRRFPVDDFEDL 386
P A+ SG R + +EDL
Sbjct: 576 PNGHCFATGSGDLRARIWSYEDL 598
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 128 (50.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 57/221 (25%), Positives = 93/221 (42%)
Query: 177 FSVAFNPTGTKIFAGYN-KSVRV--FDV---HRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230
+ VA++P G + G N K V+V F+ + G D E +S G A M
Sbjct: 665 YCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLE-FSMHDGTIRDLA-FMEG--- 719
Query: 231 SPTHTGMLAIGSYSQTSAIYREDNM--ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288
P G + I + + IY D + L+ L G G + + ++ G ++ G +D
Sbjct: 720 -PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILAL-YTWSG-WMIASGSQDK 776
Query: 289 YILCWDLR--KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKW 346
+ WDLR V+VV + + + D PSGR L TG +D +YD++ G+
Sbjct: 777 TVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVD--PSGRLLATGQEDSSCMLYDIRGGRM 834
Query: 347 ISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE-DL 386
+ + + V F P + S + V D + DL
Sbjct: 835 VQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDL 875
Score = 49 (22.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPE 91
++ + + P G + S KTLR+ + P+
Sbjct: 609 VRAVAFHPAGGLYAVGSNSKTLRVCAYPD 637
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 86/392 (21%), Positives = 160/392 (40%)
Query: 17 SDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFY-NQFRTSSI---PNNFLKGIKWSPDG 72
SD + E+ +++QE + ++ + + FY NQ + + P L + ++ G
Sbjct: 225 SDDDDNESEDDDKQEEV-DISKYSWRITKKHFFYANQAKVKCVTFHPATRLLAVGFT-SG 282
Query: 73 SSFLTSSEDKTL-RIFSLPENGIS-YDVNACS--LAKDQDSYEASLVVTEGESV-YDFCW 127
L D TL + S+ +N ++ VN LA L+V E +S Y
Sbjct: 283 EFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKL-GQLLVYEWQSESYILKQ 341
Query: 128 FPHMSASD-----PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN 182
H +++ P + + D I +WD T+G T+ + + +TA V F
Sbjct: 342 QGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTS--SVTA---VQFA 396
Query: 183 PTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG 241
G +F+ + +VR +D+ R + + T G + Q + +A P+ + A G
Sbjct: 397 KRGQVMFSSSLDGTVRAWDLIR----YRNFRTFTGTERIQ---FNCLAVDPSGEVVCA-G 448
Query: 242 SYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300
S ++ +LL L G EG V+ + FS++ + L + D I W + Q
Sbjct: 449 SLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASW-DKTIRIWSIFGRSQ 507
Query: 301 VVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG- 359
V + E + + + P G+ + G + I++++ K + D ++G
Sbjct: 508 QVEPI----EVYSDVLALSMRPDGKEVAVSTLKGQISIFNIEDAKQVGNIDCRKDIISGR 563
Query: 360 FSFHPFLPMAASSSGHRRFPVDDFEDLHLSGD 391
F+ F A +S +F F +H S D
Sbjct: 564 FNQDRF---TAKNSERSKF----FTTIHYSFD 588
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 53/204 (25%), Positives = 90/204 (44%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
+A+NP GT + + G ++ +R++ G + S L EG + +A+SP
Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTE--GDSWICKSVLS---EGHQRTVRKVAWSPCGN-Y 75
Query: 238 LAIGSYSQTSAIYR--EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA S+ T+ I++ +D+ E + L G E V V ++ GN L T R D + W++
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 296 RKAVQVVYKLYRSSEHTNQRILFDI-EPSGRHLGTGGQDGLVHIYDLQTGKWI--SGFQA 352
+ + +S HT Q + + PS L + D V +Y + W+ + +
Sbjct: 135 DEEDEYECVSVLNS-HT-QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEG 192
Query: 353 AADTVNGFSFHPFLPMAASSSGHR 376
TV +F P AS S R
Sbjct: 193 HESTVWSLAFDPSGQRLASCSDDR 216
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 112 (44.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 40/161 (24%), Positives = 68/161 (42%)
Query: 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289
FSP + G + + + ++ D+ + L + G V ++ + NY+ TG D
Sbjct: 594 FSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSA-DRT 651
Query: 290 ILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISG 349
+ WD+ V +++ + + F P+GR L TG DG V ++D+ G +
Sbjct: 652 VRLWDVLNGNCV--RIFTGHKGPIHSLTFS--PNGRFLATGATDGRVLLWDIGHGLMVGE 707
Query: 350 FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDD----FEDL 386
+ DTV F + AS S + D FEDL
Sbjct: 708 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDL 748
Score = 64 (27.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFSL 89
G +SPD + L+SSED T+R++SL
Sbjct: 549 GASFSPDRNYLLSSSEDGTVRLWSL 573
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 260 VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFD 319
VL G G + QFS DG++L + G D I W++ + + + + + + F+
Sbjct: 31 VLQGHGGEIYTSQFSSDGSFLASAGY-DQQIFLWNVFGECEN-FAVLKGHKGAIMEVKFN 88
Query: 320 IEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFH---PFLPMAASSSG 374
+ S HL + G D V ++D++TG I F++ D VN + P + +AS G
Sbjct: 89 ADSS--HLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDG 144
Score = 115 (45.5 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 56/260 (21%), Positives = 109/260 (41%)
Query: 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF--AG 191
+D + V A T D + +WD TG C R + + +I SV N G ++ A
Sbjct: 89 ADSSHLVSAGT--DKTVRVWDMETG--SCI-RNFKSHTDIVN--SVDVNRRGPQMICSAS 141
Query: 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251
+ +V V D+ ++ K K + +A+ F+ ++ G +Q ++
Sbjct: 142 DDGTVMVHDMR--SKEAAKKFICKYQQ-------TAVTFNDAADNVICGGIDNQIK-VWD 191
Query: 252 EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSS 309
++ YVL G +T + S +GN+L + D ++ WD+R V Q + Y+ +
Sbjct: 192 MLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSM-DCSLMSWDIRPFVPAQRLVARYQGA 250
Query: 310 EHTNQRILFDI--EPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLP 367
H ++ L P ++ G D V++++ ++ + +VN + HP
Sbjct: 251 SHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQ 310
Query: 368 MAASSSGHRRFPVD--DFED 385
+ S+ + + D ED
Sbjct: 311 ILLSAGSDKTIFLGELDLED 330
Score = 50 (22.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+K++ D S +++ DKT+R++ + E G
Sbjct: 85 VKFNADSSHLVSAGTDKTVRVWDM-ETG 111
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 49/231 (21%), Positives = 101/231 (43%)
Query: 68 WSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCW 127
+S DGS T S D +++I + ++Q + + + +
Sbjct: 114 FSCDGSLVATGSVDASIKILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVSYLE 173
Query: 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK 187
F H P + AS +RD + L+D ++ ++ + + + ++F+PTG
Sbjct: 174 F-H-----PKEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLC---LSFHPTGDY 224
Query: 188 IFAGYNKSV-RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT 246
+ G +V RV+DV + + + +++ +AG+ + + +SPT + A GSY
Sbjct: 225 VAIGTEHNVLRVYDVATT----QCFVSAIPSQQHKAGV-TCVKYSPTGK-LYATGSYDGD 278
Query: 247 SAIYREDNMELLYVLHGQEGG--VTHVQFSRDGNYLYTGGRKDPYILCWDL 295
I+ + + + GG + ++F+R+G YL + G D + W+L
Sbjct: 279 IKIWDGISGRCINTIAEAHGGAAICSLEFTRNGKYLLSSGM-DSLVYLWEL 328
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 128 (50.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 38/156 (24%), Positives = 68/156 (43%)
Query: 242 SYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301
S+ +T+ ++ L + G V V+F + NY+ TG D + W R+ V
Sbjct: 415 SHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGST-DKTVRLWSTRQGASV 473
Query: 302 VYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFS 361
+L+ H + P+G++L + G+D + ++DL +G + DT++ S
Sbjct: 474 --RLFTG--HRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLS 529
Query: 362 FHPFLPMAASSSGHRRFPVDDFEDLHLSGD-ENCVS 396
F + AS+S V D + H S + C S
Sbjct: 530 FSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSS 565
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 122 (48.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/145 (26%), Positives = 69/145 (47%)
Query: 230 FSPT-HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288
FSP H A S+ +T+ I+ D ++ L ++ G V VQ+ + NY+ TG D
Sbjct: 468 FSPFGH--YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGS-SDK 524
Query: 289 YILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ WD++ V +++ H + + + P GR++ +G +DG + ++DL T + I+
Sbjct: 525 TVRLWDVQTGECV--RIFIG--HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCIT 580
Query: 349 GFQAAADTVNGFSFHPFLPMAASSS 373
V S+ + AS S
Sbjct: 581 PLMGHNSCVWSLSYSGEGSLLASGS 605
Score = 51 (23.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 68 WSPDGSSFLTSSEDKTLRIFSLPEN 92
+SP G L+SS D T+R++S N
Sbjct: 426 FSPPGDFVLSSSADTTIRLWSTKLN 450
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 54/209 (25%), Positives = 92/209 (44%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
+A+NP GT + + G ++SVR++ GR+ + + EG + +A+SP
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIW-----GREGDSWICKSVLCEGHQRTVRKVAWSPCGN-Y 75
Query: 238 LAIGSYSQTSAIYRE--DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD- 294
LA S+ T+ I+++ D+ E + L G E V V ++ GN L T R D + W+
Sbjct: 76 LASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-DKSVWVWEG 134
Query: 295 -----LRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWI-- 347
+V YK + +++L+ PS L + D V +Y + W+
Sbjct: 135 TVENQPSDPTRVPYK-----PQSMKKVLW--HPSQELLASASYDDTVKLYREEEDDWVCC 187
Query: 348 SGFQAAADTVNGFSFHPFLPMAASSSGHR 376
+ + TV +F P AS S R
Sbjct: 188 ATLEGHESTVWSLAFDPSGQRLASCSDDR 216
>CGD|CAL0003002 [details] [associations]
symbol:UTP18 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0034388 "Pwp2p-containing subcomplex
of 90S preribosome" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003002 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0032040 EMBL:AACQ01000089 KO:K14553
HOGENOM:HOG000162649 RefSeq:XP_715203.1 RefSeq:XP_889022.1
ProteinModelPortal:Q5A0E1 STRING:Q5A0E1 GeneID:3643123
GeneID:3703936 KEGG:cal:CaO19.7154 KEGG:cal:CaO19_7154
Uniprot:Q5A0E1
Length = 552
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 49/171 (28%), Positives = 81/171 (47%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYVLHG---QEGGVTHVQ 272
G++GI + I F P + +L G + +T IY+ D N Y L E + Q
Sbjct: 232 GKSGIQT-IDFHPNYP-ILLTGGFDKTIRIYQIDGKSNNFITSYFLKNCPIMEASF-YPQ 288
Query: 273 FSRD----GNYLYTGGRKDPYILCWDLRKA-VQVVYKLYRSSEHTNQRI-LFDIEPSGRH 326
S D N +Y GR+ Y+ +L ++ + +LY E T + F I P G++
Sbjct: 289 LSGDDTKTSNLIYASGRRR-YMNKINLSTGEIEKISRLY-GHEQTQKSFEYFKISPQGKY 346
Query: 327 LGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSF---HPFLPMAASSSG 374
+G G +G ++ + QTG W+ GF+ T+ F+F F+ M +S+G
Sbjct: 347 IGLTGNNGWCNLLNAQTGHWVHGFKIEG-TIVDFAFANDESFI-MIVNSAG 395
>UNIPROTKB|Q5A0E1 [details] [associations]
symbol:CaO19.7154 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003002 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0032040 EMBL:AACQ01000089 KO:K14553
HOGENOM:HOG000162649 RefSeq:XP_715203.1 RefSeq:XP_889022.1
ProteinModelPortal:Q5A0E1 STRING:Q5A0E1 GeneID:3643123
GeneID:3703936 KEGG:cal:CaO19.7154 KEGG:cal:CaO19_7154
Uniprot:Q5A0E1
Length = 552
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 49/171 (28%), Positives = 81/171 (47%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYVLHG---QEGGVTHVQ 272
G++GI + I F P + +L G + +T IY+ D N Y L E + Q
Sbjct: 232 GKSGIQT-IDFHPNYP-ILLTGGFDKTIRIYQIDGKSNNFITSYFLKNCPIMEASF-YPQ 288
Query: 273 FSRD----GNYLYTGGRKDPYILCWDLRKA-VQVVYKLYRSSEHTNQRI-LFDIEPSGRH 326
S D N +Y GR+ Y+ +L ++ + +LY E T + F I P G++
Sbjct: 289 LSGDDTKTSNLIYASGRRR-YMNKINLSTGEIEKISRLY-GHEQTQKSFEYFKISPQGKY 346
Query: 327 LGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSF---HPFLPMAASSSG 374
+G G +G ++ + QTG W+ GF+ T+ F+F F+ M +S+G
Sbjct: 347 IGLTGNNGWCNLLNAQTGHWVHGFKIEG-TIVDFAFANDESFI-MIVNSAG 395
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 129 (50.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 46/193 (23%), Positives = 91/193 (47%)
Query: 161 RCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219
RC R + AV I ++ F+ T T + G + +++++D+ ++Y T N +
Sbjct: 100 RCV-RTWKAV-HIAPVATMVFDSTSTLLATGGCDSTIKIWDM------IKQYCT--HNLK 149
Query: 220 GQAGIMSAIAFSPTHTGM-LAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
G +G++ + F P + + L S I+ ++ + + VL G VT + F+ DGN
Sbjct: 150 GSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGN 209
Query: 279 YLYTGGRKDPYILCWDL--RKAVQVVYKLYRSSE------HTNQRILFDIEPSGRHLGTG 330
L + GR D + W+L R++++ + +Y S E ++ G H T
Sbjct: 210 TLISSGR-DKICMVWNLKTRESIRTI-PIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTA 267
Query: 331 GQDGLVHIYDLQT 343
G G++ ++++ T
Sbjct: 268 GSKGVLKVWEVAT 280
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 51/219 (23%), Positives = 97/219 (44%)
Query: 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190
M+ + V A+T+ ++ + +WD ++G +R T + D++ A F+ + A
Sbjct: 273 MAVTHDNKSVIAATSSNN-LFVWDVSSGRVRHTLTGH--TDKVCAVDVSKFSSRHV-VSA 328
Query: 191 GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250
Y+++++++D+H+ G Y T N +AI S + + G ++
Sbjct: 329 AYDRTIKLWDLHK-G-----YCT---NTVLFTSNCNAICLSIDGLTVFS-GHMDGNLRLW 378
Query: 251 REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE 310
+LL + G VT V SR+GN + T GR + + + +D R +++ L S
Sbjct: 379 DIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNV-FDTR-TLEICGTLRASGN 436
Query: 311 HTNQRILFD-IEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
I P ++ G DG VH++ L G +S
Sbjct: 437 RLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVS 475
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 126 (49.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 53/215 (24%), Positives = 93/215 (43%)
Query: 169 AVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKY--STLKGNKEGQ---AG 223
++D + V F+ G I G NK+ +VF+V G K + NK+ +G
Sbjct: 196 SLDHSSVVCCVRFSRDGKFIATGCNKTTQVFNV-TTGELVAKLIDESSNENKDDNTTASG 254
Query: 224 --IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281
+ ++ FSP +LA G+ + I+ ++ +L G E + + F DG+ L
Sbjct: 255 DLYIRSVCFSPDGK-LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV 313
Query: 282 TGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDL 341
+G D + WDLR + Q L S E + + P G+ + G D V ++D
Sbjct: 314 SGSG-DRSVRIWDLRTS-QCSLTL--SIEDGVTTVA--VSPDGKLIAAGSLDRTVRVWDS 367
Query: 342 QTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHR 376
TG + + + NG + +A S++G +
Sbjct: 368 TTGFLVERLDSGNENGNGHEDSVY-SVAFSNNGEQ 401
Score = 96 (38.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 35/145 (24%), Positives = 68/145 (46%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190
A P + A+ + D + +WD+TTG L R + + +SVAF+ G +I +
Sbjct: 345 AVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIAS 404
Query: 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
G +++V+++ H G+ +K ST + G + ++ +P + +L+ GS +
Sbjct: 405 GSLDRTVKLW--HLEGKS-DKKSTCEVTYIGHKDFVLSVCCTPDNEYILS-GSKDRGVIF 460
Query: 250 YREDNMELLYVLHGQEGGVTHVQFS 274
+ + + L +L G V V S
Sbjct: 461 WDQASGNPLLMLQGHRNSVISVAVS 485
Score = 66 (28.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSL 89
T++ + +++ + +SPDG T +EDK +RI+ L
Sbjct: 250 TTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDL 284
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 126 (49.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 53/215 (24%), Positives = 93/215 (43%)
Query: 169 AVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKY--STLKGNKEGQ---AG 223
++D + V F+ G I G NK+ +VF+V G K + NK+ +G
Sbjct: 196 SLDHSSVVCCVRFSRDGKFIATGCNKTTQVFNV-TTGELVAKLIDESSNENKDDNTTASG 254
Query: 224 --IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281
+ ++ FSP +LA G+ + I+ ++ +L G E + + F DG+ L
Sbjct: 255 DLYIRSVCFSPDGK-LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV 313
Query: 282 TGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDL 341
+G D + WDLR + Q L S E + + P G+ + G D V ++D
Sbjct: 314 SGSG-DRSVRIWDLRTS-QCSLTL--SIEDGVTTVA--VSPDGKLIAAGSLDRTVRVWDS 367
Query: 342 QTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHR 376
TG + + + NG + +A S++G +
Sbjct: 368 TTGFLVERLDSGNENGNGHEDSVY-SVAFSNNGEQ 401
Score = 96 (38.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 35/145 (24%), Positives = 68/145 (46%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190
A P + A+ + D + +WD+TTG L R + + +SVAF+ G +I +
Sbjct: 345 AVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIAS 404
Query: 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
G +++V+++ H G+ +K ST + G + ++ +P + +L+ GS +
Sbjct: 405 GSLDRTVKLW--HLEGKS-DKKSTCEVTYIGHKDFVLSVCCTPDNEYILS-GSKDRGVIF 460
Query: 250 YREDNMELLYVLHGQEGGVTHVQFS 274
+ + + L +L G V V S
Sbjct: 461 WDQASGNPLLMLQGHRNSVISVAVS 485
Score = 66 (28.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSL 89
T++ + +++ + +SPDG T +EDK +RI+ L
Sbjct: 250 TTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDL 284
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 116 (45.9 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 60/233 (25%), Positives = 94/233 (40%)
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194
P + AS++ DH I LWD + + E +V+F+P ++ +G ++K
Sbjct: 78 PDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVE-----TVSFSPDSKQLASGGWDK 132
Query: 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY--RE 252
V++V + GR + L G+ + I S+ FSPT + LA GS+ T I+ R
Sbjct: 133 RAIVWEV-QSGR---RVHLLVGHCDS---IQSS-DFSPT-SDSLATGSWDSTVHIWDLRA 183
Query: 253 DNMELLYV-LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEH 311
+ Y L G G ++ + +S G L G D I W K L H
Sbjct: 184 STPVVSYHNLEGHTGNISCLCYSASG--LLASGSWDKTICVW---KPTTNNLPLQLKG-H 237
Query: 312 TNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHP 364
T P L + G V ++D TGK + + D + F P
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTP 290
Score = 113 (44.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 180 AFNPTG-TKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML 238
AF+P G T + A + V V+ + GR L G G + + FSP ++
Sbjct: 33 AFSPDGRTLLTASDDGCVYVWGT-KSGR-------LLWRLAGHRGPVKSCCFSPDGR-LI 83
Query: 239 AIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298
A S + ++ + L+VL G + V V FS D L +GG D + W+
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGW-DKRAIVWE---- 138
Query: 299 VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQ 342
VQ +++ H + D P+ L TG D VHI+DL+
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLR 182
Score = 46 (21.3 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 68 WSPDGSSFLTSSED 81
+SPDG + LT+S+D
Sbjct: 34 FSPDGRTLLTASDD 47
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 126 (49.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 76/299 (25%), Positives = 114/299 (38%)
Query: 122 VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITA-AFSVA 180
VY W P + S ++D + +W+A T + T+ A+ A + A
Sbjct: 68 VYSLDWTPEKNR-------IVSASQDGRLIVWNALTS--QKTH----AIKLPCAWVMTCA 114
Query: 181 FNPTGTKIFAGYNKSV-RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA 239
F+P+G + G SV +F+++ P D + + G G +S+ + P L
Sbjct: 115 FSPSGQSVACGGLDSVCSIFNLNSP-IDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLI 173
Query: 240 IGSYSQTSAIYREDNMELLYVLHG--QEGGVTHVQ---FSRDGNYLYTGGRKDPYILCWD 294
S QT ++ V G Q G VQ S L+ G D WD
Sbjct: 174 TSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWD 233
Query: 295 LRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGF-QAA 353
R A + Y N F P G GTG +DG ++D++T + + Q
Sbjct: 234 TRVASRAQRTFYGHEGDVNTVKFF---PDGNRFGTGSEDGTCRLFDIRTEHQLQVYYQPH 290
Query: 354 ADTVNGFSFHPFLPMAASSSGHRRFPVDDFEDLHLSGDENCVSVWSFLYASMMENADGI 412
D G H MA S SG F V + +GD C VW L A ++ N G+
Sbjct: 291 GD---GDIPH-VTSMAFSISGRLLF-VG-----YSNGD--CY-VWDTLLAKVVLNLGGV 336
Score = 38 (18.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 5/23 (21%), Positives = 16/23 (69%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFS 88
+ W+P+ + +++S+D L +++
Sbjct: 71 LDWTPEKNRIVSASQDGRLIVWN 93
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 131 (51.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 239 AIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298
A GS+ +T+ ++ D L + G V V+F + NYL TG D + W ++
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST-DKTVRLWSAQQG 458
Query: 299 VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVN 358
V +L+ H + P+G++L + G+D + ++DL +G + D++
Sbjct: 459 NSV--RLFTG--HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSIT 514
Query: 359 GFSFHPFLPMAASSS 373
+F P + AS+S
Sbjct: 515 SLAFSPDSGLIASAS 529
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 69 SPDGSSFLTSSEDKTLRIFS 88
SP F + S D+T R++S
Sbjct: 393 SPFSLYFASGSHDRTARLWS 412
>UNIPROTKB|Q5I0B4 [details] [associations]
symbol:mlst8 "Target of rapamycin complex subunit lst8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005737
"cytoplasm" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 KO:K08266
CTD:64223 HOGENOM:HOG000208395 HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3
EMBL:CR760803 EMBL:BC088512 RefSeq:NP_001011443.1 UniGene:Str.15148
ProteinModelPortal:Q5I0B4 STRING:Q5I0B4 GeneID:496930
KEGG:xtr:496930 Xenbase:XB-GENE-981763 InParanoid:Q5I0B4
Bgee:Q5I0B4 Uniprot:Q5I0B4
Length = 326
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 49/190 (25%), Positives = 83/190 (43%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++++ +P + M+A Y Q +
Sbjct: 18 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNSLEVTPDRS-MIAAAGY-QHIRM 67
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G +T V F DG ++YTGG +D WDLR ++++
Sbjct: 68 YDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGG-EDCMARIWDLRSRNLQCQRIFQ 126
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLP 367
+ N +F + P+ L G Q G +HI+DL+T + ++N P
Sbjct: 127 VNAPIN--CVF-LHPNQAELIVGDQSGAIHIWDLKTDQNEQLIPETDVSINSVHIDPDAS 183
Query: 368 -MAA-SSSGH 375
MAA +SSG+
Sbjct: 184 YMAAVNSSGN 193
>UNIPROTKB|Q6PA72 [details] [associations]
symbol:mlst8 "Target of rapamycin complex subunit lst8"
species:8355 "Xenopus laevis" [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K08266 CTD:64223 HOVERGEN:HBG054763
EMBL:BC060429 RefSeq:NP_001083382.1 UniGene:Xl.19213
ProteinModelPortal:Q6PA72 IntAct:Q6PA72 GeneID:398895
KEGG:xla:398895 Xenbase:XB-GENE-981769 Uniprot:Q6PA72
Length = 326
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 49/190 (25%), Positives = 83/190 (43%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++++ +P + M+A Y Q +
Sbjct: 18 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNSLEVTPDRS-MIAAAGY-QHIRM 67
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G +T V F DG ++YTGG +D WDLR ++++
Sbjct: 68 YDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGG-EDCMARIWDLRSRNLQCQRIFQ 126
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLP 367
+ N +F + P+ L G Q G +HI+DL+T + ++N P
Sbjct: 127 VNAPIN--CVF-LHPNQAELIVGDQSGAIHIWDLKTDQNEQLIPETDVSINSVHIDPDAS 183
Query: 368 -MAA-SSSGH 375
MAA +SSG+
Sbjct: 184 YMAAVNSSGN 193
>UNIPROTKB|F1RFA8 [details] [associations]
symbol:MLST8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0050731
GO:GO:0030838 GO:GO:0032314 GO:GO:0032008
GeneTree:ENSGT00390000014795 OMA:NNKGNCY EMBL:FP102909
EMBL:FP102350 Ensembl:ENSSSCT00000008815 Uniprot:F1RFA8
Length = 330
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H G T + A ++A+ +P + M+A Y Q +
Sbjct: 20 AGYDHTVRFWQAHS-G-----ICTRTVQHQDSAQQVNALEITPDRS-MIAAAGY-QHIRM 71
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G + V F DG ++YTGG +D WDLR ++++
Sbjct: 72 YDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGG-EDCTARIWDLRSRNLQCQRIFQ 130
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+ N L P+ L G Q G +HI+DL+T
Sbjct: 131 VNAPINCVCL---HPNQAELIVGDQSGAIHIWDLKT 163
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 62/256 (24%), Positives = 107/256 (41%)
Query: 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN 193
DP AS ++D +++W+ + R + V A + V ++P G I + G +
Sbjct: 56 DPKMRQVASCSKDSIVYVWN-----FKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQD 110
Query: 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253
+ +R++ K S +K + G + +++FS G L S +T ++R
Sbjct: 111 RQIRLWQ----NTVQSKCSIIKAH----CGAIRSMSFS-ADGGYLLSSSDDKTLKLWRLQ 161
Query: 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL--RKAVQV---------V 302
+ + + G + V S D L G D ++ WDL +K V +
Sbjct: 162 DKKFMCSFAGHKNWVRSGVISPDMR-LVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKI 220
Query: 303 YKLYRSSEH--TNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGF 360
++ S+H T ++LF P G L + D + I D+++ K I + A VN
Sbjct: 221 SQINSYSDHMDTVSQVLF--HPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSI 278
Query: 361 SFHP---FLPMAASSS 373
S HP FL A S S
Sbjct: 279 SIHPTGYFLASAGSDS 294
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/191 (22%), Positives = 85/191 (44%)
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA----------VDEITAAFSVAFNPTG 185
P + AS + D + LWD + Y D D + V F+P G
Sbjct: 183 PDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDG 242
Query: 186 T-KIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS 244
T I + ++ +++ D+ R + + Y+ + Q +++I+ PT + + GS S
Sbjct: 243 TCLISSSFDHKIKITDI-RSNKLIQHYNA----HDAQ---VNSISIHPTGYFLASAGSDS 294
Query: 245 QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW--DLRKAVQVV 302
+ I+ +Y L+ + +T VQF++ G+Y TGG ++ + W + + +Q +
Sbjct: 295 KIK-IWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQN-LCMVWKTNFDQNIQNI 352
Query: 303 YKLYRSSEHTN 313
++ RS+ N
Sbjct: 353 EQVQRSTVRQN 363
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPE 91
++ + +S DG L+SS+DKTL+++ L +
Sbjct: 134 IRSMSFSADGGYLLSSSDDKTLKLWRLQD 162
Score = 54 (24.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAK 105
+K+SPDG + + +D+ +R++ +N + + CS+ K
Sbjct: 95 VKYSPDGETIASCGQDRQIRLW---QNTVQ---SKCSIIK 128
>MGI|MGI:90168 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:90168 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:AK033540 EMBL:AK152395 EMBL:BC008545 EMBL:BC037001
IPI:IPI00127271 IPI:IPI00378419 RefSeq:NP_001185938.1
RefSeq:NP_598495.1 UniGene:Mm.11535 UniGene:Mm.488383
ProteinModelPortal:Q91VU6 SMR:Q91VU6 STRING:Q91VU6
PhosphoSite:Q91VU6 PaxDb:Q91VU6 PRIDE:Q91VU6 DNASU:28199
Ensembl:ENSMUST00000072530 Ensembl:ENSMUST00000117236
Ensembl:ENSMUST00000121622 GeneID:28199 KEGG:mmu:28199
UCSC:uc007tyz.2 InParanoid:Q91VU6 ChiTaRS:DCAF11 NextBio:306796
Bgee:Q91VU6 CleanEx:MM_WDR23 Genevestigator:Q91VU6
GermOnline:ENSMUSG00000022214 Uniprot:Q91VU6
Length = 549
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 41/139 (29%), Positives = 61/139 (43%)
Query: 163 TYRAYDA-VDEIT-AAFSVAFNPTGTKIFAGYNKS-VRVFDVHRPGRDFEKYSTLKG-NK 218
T+ A D DE A FS+A + G ++ G N + VFD + R + S N
Sbjct: 253 THTALDLRPDERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
A I S I FS + + +T RED+ + + L G + G+T + D
Sbjct: 313 VAFADISSQILFSGGDDAICKVWD-RRTM---REDDPKPVGALAGHQDGITFIDSKGDAR 368
Query: 279 YLYTGGRKDPYILCWDLRK 297
YL + KD I WD+R+
Sbjct: 369 YLISNS-KDQTIKLWDIRR 386
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 311 HTNQRILFD-IEPSGRH-LGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPM 368
HT R F +G+ + +G G V +YDL +G + V S+HPF
Sbjct: 438 HTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEK 497
Query: 369 AASSS 373
SSS
Sbjct: 498 IVSSS 502
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIF 87
GI +S DG F+++ +D+T+R++
Sbjct: 178 GI-YSKDGQIFMSACQDQTIRLY 199
>RGD|1311288 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1311288 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:BC087110 EMBL:BC091364 IPI:IPI00196528 RefSeq:NP_001009686.1
UniGene:Rn.16542 ProteinModelPortal:Q5M9G8 STRING:Q5M9G8
Ensembl:ENSRNOT00000059987 GeneID:305895 KEGG:rno:305895
UCSC:RGD:1311288 InParanoid:Q5M9G8 NextBio:655204
Genevestigator:Q5M9G8 Uniprot:Q5M9G8
Length = 549
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 41/139 (29%), Positives = 61/139 (43%)
Query: 163 TYRAYDA-VDEIT-AAFSVAFNPTGTKIFAGYNKS-VRVFDVHRPGRDFEKYSTLKG-NK 218
T+ A D DE A FS+A + G ++ G N + VFD + R + S N
Sbjct: 253 THTALDLRPDERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
A I S I FS + + +T RED+ + + L G + G+T + D
Sbjct: 313 VAFADISSQILFSGGDDAICKVWD-RRTM---REDDPKPVGALAGHQDGITFIDSKGDAR 368
Query: 279 YLYTGGRKDPYILCWDLRK 297
YL + KD I WD+R+
Sbjct: 369 YLISNS-KDQTIKLWDIRR 386
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 311 HTNQRILFD-IEPSGRH-LGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPM 368
HT R F +G+ + +G G V +YDL +G + V S+HPF
Sbjct: 438 HTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEK 497
Query: 369 AASSS 373
SSS
Sbjct: 498 IVSSS 502
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIF 87
GI +S DG F+++ +D+T+R++
Sbjct: 178 GI-YSKDGQIFMSACQDQTIRLY 199
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 58/266 (21%), Positives = 112/266 (42%)
Query: 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPT 184
W +S + + S +RD I LW+ + R + +++F+ +
Sbjct: 17 WVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFD-S 75
Query: 185 GTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS 244
+ A ++K++R++D+ + G ++ G + +++ SP + +++ GS
Sbjct: 76 HYALSASWDKTIRLWDLEK-GECTHQFV-------GHTSDVLSVSISPDNRQVVS-GSRD 126
Query: 245 QTSAIYRE-DNMELLYVLHGQEGGVTHVQFSRD-GNYLYTGGRKDPYILCWDLRKAVQVV 302
+T I+ N + G V+ V+FS + N + D + WDL
Sbjct: 127 KTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE-----T 181
Query: 303 YKLYRSSE--HTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGF 360
+ L R+S HT I P G +GG+DG + ++DL + +A A+ +N
Sbjct: 182 FSL-RTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN-INAL 239
Query: 361 SFHP--FLPMAASSSGHRRFPVDDFE 384
F P + AA+ S R F ++ E
Sbjct: 240 VFSPNRYWLCAATGSSIRIFDLETQE 265
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 48/254 (18%), Positives = 107/254 (42%)
Query: 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN-KS 195
S +F +T D + WD TG + ++ + SV + G ++ +G + ++
Sbjct: 111 SHIFTCST-DKTLAFWDIATGQRQRRFKGHG-----NFVNSVQGSRRGQQLLCSGSDDRT 164
Query: 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255
++++D + TL+ + ++A+ F T +++ G I+
Sbjct: 165 IKIWDARKK----HAAHTLESPFQ-----VTAVCFGDTGEQVIS-GGIDNEVKIWDIRKQ 214
Query: 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV--QVVYKLYRSSEHTN 313
+L+ L G +T + S +G+++ T D + WD+R + K+++ +H
Sbjct: 215 AVLHHLRGHSDTITGMSLSPEGDFILTNAM-DNTLRVWDVRPYAPGERCVKVFQGHQHNF 273
Query: 314 QRILFDI--EPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAAS 371
++ L P + +G D V+I+D+ T + + +VN F P P+ S
Sbjct: 274 EKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILS 333
Query: 372 SSGHRRFPVDDFED 385
S + + + ++
Sbjct: 334 GSSDKTLYLGEIDE 347
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 68 WSPDGSSFLTSSEDKTLRIFSL 89
++PDGS T S DKTL + +
Sbjct: 106 FTPDGSHIFTCSTDKTLAFWDI 127
>UNIPROTKB|Q17QU5 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0050731 GO:GO:0030838 GO:GO:0032314 KO:K08266 GO:GO:0032008
EMBL:BT021562 EMBL:BC118176 IPI:IPI00908071 RefSeq:NP_001030488.1
UniGene:Bt.3376 ProteinModelPortal:Q17QU5 STRING:Q17QU5
PRIDE:Q17QU5 Ensembl:ENSBTAT00000013104 Ensembl:ENSBTAT00000053181
GeneID:535236 KEGG:bta:535236 CTD:64223
GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 NextBio:20876671
ArrayExpress:Q17QU5 Uniprot:Q17QU5
Length = 326
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 43/156 (27%), Positives = 67/156 (42%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++A+ +P T M+A Y Q +
Sbjct: 18 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNALEITPDRT-MIAAAGY-QHIRM 67
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G V V F DG ++YTGG +D WDLR ++++
Sbjct: 68 YDLNSNNPNPIISYDGVNKNVASVGFHEDGRWMYTGG-EDCTARIWDLRSRNLQCQRIFQ 126
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+ N L P+ L G Q G +HI+DL+T
Sbjct: 127 VNAPINCVCL---HPNQAELIVGDQSGAIHIWDLKT 159
>UNIPROTKB|F1NAZ4 [details] [associations]
symbol:MLST8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0050731 "positive regulation of
peptidyl-tyrosine phosphorylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 GO:GO:0032008 GeneTree:ENSGT00390000014795
OMA:NNKGNCY EMBL:AADN02023651 IPI:IPI00592090
Ensembl:ENSGALT00000009446 Uniprot:F1NAZ4
Length = 327
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 51/190 (26%), Positives = 80/190 (42%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++A+ +P + M+A Y Q +
Sbjct: 19 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNALEITPDRS-MIAAAGY-QHIRM 68
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G +T V F DG ++YTGG +D WDLR ++++
Sbjct: 69 YDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGG-EDCMARIWDLRSRNLQCQRIFQ 127
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLP 367
+ N L P+ L G Q G +HI+DL+T +VN P
Sbjct: 128 VNAPINCVCL---HPNQAELIVGDQSGAIHIWDLKTDHNEQLIPEPEVSVNSVHIDPDAS 184
Query: 368 -MAA-SSSGH 375
MAA +SSG+
Sbjct: 185 YMAAVNSSGN 194
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 128 (50.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 67/282 (23%), Positives = 116/282 (41%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPG 205
D I +WD +G T+ + + A + F+ G +F+ + SVR +D+ R
Sbjct: 360 DGKIKVWDMNSGFCIVTFTQHTS-----AVSGLCFSKRGNVLFSSSLDGSVRAWDLIR-- 412
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265
+ + T Q S IA P+ + A S ++ +LL L G E
Sbjct: 413 --YRNFRTFTAPSRVQ---FSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHE 467
Query: 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGR 325
G V+ + F+ G+ L +G D + WD+ +V L S+ + + F P G+
Sbjct: 468 GPVSSLSFNSSGSLLASGSW-DKTVRIWDIFSRSGIVEPLPIPSDVLS--LAF--HPDGK 522
Query: 326 HLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFED 385
+ DG + +++Q GK S D G F A +SS ++ F
Sbjct: 523 EVCVASLDGQLTFWNVQEGKQTSLIDGRKDLSGGRRFDD-ARTAENSSLNKTFT-----S 576
Query: 386 LHLSGDENCV-SVWSFLYASMMENADGINGCEFNCQSEHENL 426
+ S D +CV S + Y + + G+ +F S++E+L
Sbjct: 577 ICYSADGSCVLSAGTSKYVCLYDIITGVLIKKFQL-SKNESL 617
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 6/27 (22%), Positives = 17/27 (62%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSL 89
L +++S DG +T ++D ++++ +
Sbjct: 342 LSTLQYSSDGQRIITGADDGKIKVWDM 368
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 50/216 (23%), Positives = 86/216 (39%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPG 205
D I +WD +G T+ + +A V F G +F+ + ++R +D+ R
Sbjct: 360 DGKIKIWDVRSGFCLMTF-----TEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIR-- 412
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY--REDNMELLYVLHG 263
F + T Q + +A P+ G + +G T IY +LL L G
Sbjct: 413 --FRNFKTFTATSRVQ---FNCLAVDPS--GEVIVGGSQDTFEIYVWSVQTGQLLDSLTG 465
Query: 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPS 323
EG ++ + F ++ N + D I W++ Q V + E + + + P
Sbjct: 466 HEGPISCLTFGKE-NSILASASWDKTIRIWNIFSRNQTVEPI----EIQSDALCLTMRPD 520
Query: 324 GRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ L DG V I+D++ K + D VNG
Sbjct: 521 CKELAVSTLDGHVTIFDIEDAKQLHLIDGRKDIVNG 556
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 50/216 (23%), Positives = 86/216 (39%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPG 205
D I +WD +G T+ + +A V F G +F+ + ++R +D+ R
Sbjct: 360 DGKIKIWDVRSGFCLMTF-----TEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIR-- 412
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY--REDNMELLYVLHG 263
F + T Q + +A P+ G + +G T IY +LL L G
Sbjct: 413 --FRNFKTFTATSRVQ---FNCLAVDPS--GEVIVGGSQDTFEIYVWSVQTGQLLDSLTG 465
Query: 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPS 323
EG ++ + F ++ N + D I W++ Q V + E + + + P
Sbjct: 466 HEGPISCLTFGKE-NSILASASWDKTIRIWNIFSRNQTVEPI----EIQSDALCLTMRPD 520
Query: 324 GRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNG 359
+ L DG V I+D++ K + D VNG
Sbjct: 521 CKELAVSTLDGHVTIFDIEDAKQLHLIDGRKDIVNG 556
>UNIPROTKB|F1SGL8 [details] [associations]
symbol:DCAF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:CT961055 RefSeq:XP_001928394.1 UniGene:Ssc.26086
ProteinModelPortal:F1SGL8 Ensembl:ENSSSCT00000002247
GeneID:100157270 KEGG:ssc:100157270 Uniprot:F1SGL8
Length = 546
Score = 102 (41.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 163 TYRAYDA--VDEITAAFSVAFNPTGTKIFAGYNKS-VRVFDVHRPGRDFEKYSTLKGNKE 219
T+ A D V+ A FS+A + G ++ G N + VFD + R + ++ +++
Sbjct: 253 THTALDLRPVERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQ----IESHED 308
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY-----REDNMELLYVLHGQEGGVTHVQFS 274
++A+AF+ + +L G ++ RED+ + + L G + G+T +
Sbjct: 309 D----VNAVAFADMSSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDSK 364
Query: 275 RDGNYLYTGGRKDPYILCWDLRK 297
D YL + KD I WD+R+
Sbjct: 365 GDARYLISNS-KDQTIKLWDIRR 386
Score = 60 (26.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 325 RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
+++ +G G V +YDL +G + + V S+HPF SSS
Sbjct: 454 QYIYSGCSTGKVVVYDLLSGHIVKKLTSHKACVRDVSWHPFEEKIVSSS 502
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIF 87
GI +S DG F+++ +D+ +R++
Sbjct: 178 GI-YSKDGQIFMSACQDQVIRMY 199
Score = 44 (20.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 47 YHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+H + + + + L + ++PDG+ FL SS + I ++ G
Sbjct: 206 FHKFKSIKARDVGWSVLD-VAFTPDGNHFLYSSWSDYIHICNIYGEG 251
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 49/196 (25%), Positives = 80/196 (40%)
Query: 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
+S SP H +A G I N + G + V H+QF+ DG L +
Sbjct: 965 VSCCCLSP-HLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSS 1023
Query: 285 RKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTG 344
D I W+ + V + ++ + F + + + L + DG V I+ + TG
Sbjct: 1024 -DDSSIQVWNWQSEEYVFLQAHQETVKD-----FKLLKNSKLL-SWSFDGTVKIWSIITG 1076
Query: 345 KWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE---DLH-LSGDENCV--SVW 398
+ F DTV P +S+S + + FE LH L G + CV SV+
Sbjct: 1077 RIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVF 1136
Query: 399 SFLYASMMENADGING 414
S + ++++ D NG
Sbjct: 1137 S-VDSTLLATGDD-NG 1150
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/22 (63%), Positives = 21/22 (95%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIF 87
+ +SPDGSSFLTSS+D+T+R++
Sbjct: 889 VMFSPDGSSFLTSSDDQTIRLW 910
>UNIPROTKB|Q5TFK1 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9606 "Homo sapiens" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 EMBL:AL049795
HOGENOM:HOG000231322 OrthoDB:EOG4HX519 UniGene:Hs.530096
HGNC:HGNC:3272 ChiTaRS:EIF3I EMBL:AL121991 IPI:IPI00642205
SMR:Q5TFK1 STRING:Q5TFK1 Ensembl:ENST00000355082 HOVERGEN:HBG104529
Uniprot:Q5TFK1
Length = 125
Score = 100 (40.3 bits), Expect = 0.00016, P = 0.00016
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 260 VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFD 319
+L G E +T ++++R+G+ L+T KDP + W ++ Y HT D
Sbjct: 5 LLQGHERSITQIKYNREGDLLFTVA-KDPIVNVWYSVNGERL--GTYMG--HTGAVWCVD 59
Query: 320 IEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQA-AADTVNGFSF 362
+ +H+ TG D ++D +TGK ++ + +A GF F
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDF 103
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 49/201 (24%), Positives = 92/201 (45%)
Query: 173 ITAAFSVAFNPTGTKIFAGYNKS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFS 231
++A + +AF+ TG++IF G + + V+++ D +STL+G+ + + A+ F
Sbjct: 11 LSAVYCIAFDRTGSRIFTGSDDALVKIWSSF----DGRLHSTLRGHYAEISDL--AVNFE 64
Query: 232 PTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSR--DGNYLYTGGRKDPY 289
T ++A GS +T ++ + VL G G +T +QFS G+ Y
Sbjct: 65 NT---LIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFVKGSKRYMVSTGTDA 121
Query: 290 ILC---WDLRKAVQVVYKLYRSSEHTN---QRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+C WD+ + + ++ +E Q + P G L TG D ++ IY L +
Sbjct: 122 TVCFWQWDVNNN-EFSDRQHKFTERPRPGVQTVCSSFSPGGMFLATGSTDDVIRIYYLGS 180
Query: 344 G--KWISGFQAAADTVNGFSF 362
G + ++ + D V+ F
Sbjct: 181 GSPEKLAELDSHTDKVDSIQF 201
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 114 (45.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 228 IAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287
++FSP A S+ +T+ ++ +++ L + G V+F + NYL TG D
Sbjct: 727 VSFSPFGF-YFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSN-D 784
Query: 288 PYILCWDLR--KAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGK 345
W+++ K V++ + +R+ +T + F P GR L T G+D V ++DL TGK
Sbjct: 785 KSARLWEIQTGKCVRI-FMGHRAPIYT---VAFS--PDGRLLATAGEDTSVILWDLSTGK 838
Query: 346 WISGFQAAADTVNGFSF 362
+ V F
Sbjct: 839 KVKKMDGHTKCVYSLDF 855
Score = 59 (25.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSL 89
++F+T + + G +SPD L+ SED T R++S+
Sbjct: 670 SEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSM 708
>UNIPROTKB|H3BN58 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9606 "Homo sapiens" [GO:0030838 "positive regulation of
actin filament polymerization" evidence=IEA] [GO:0032314
"regulation of Rac GTPase activity" evidence=IEA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 EMBL:AC009065 HGNC:HGNC:24825 Ensembl:ENST00000569457
Bgee:H3BN58 Uniprot:H3BN58
Length = 202
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 41/156 (26%), Positives = 67/156 (42%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++A+ +P + M+A Y Q +
Sbjct: 18 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNALEVTPDRS-MIAAAGY-QHIRM 67
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G + V F DG ++YTGG +D WDLR ++++
Sbjct: 68 YDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGG-EDCTARIWDLRSRNLQCQRIFQ 126
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+ N L P+ L G Q G +HI+DL+T
Sbjct: 127 VNAPINCVCL---HPNQAELIVGDQSGAIHIWDLKT 159
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 236 GMLAIGSYSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
G L YS S I+ + +L V +G G VT + F+R GN L +G KD ++ WD
Sbjct: 71 GALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGS-KDTEVIVWD 129
Query: 295 LRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAA 354
+ L+R H +Q + HL T +DG + I+D +T I
Sbjct: 130 ----IITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHR 185
Query: 355 DTVNGFSFHP 364
+ + G +P
Sbjct: 186 NPIWGIDVNP 195
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 259 YVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQ-RIL 317
++L G EG V +F+ DGNY T G KD I W+ + + + K Y+S H + R +
Sbjct: 12 HILKGHEGAVLAARFNGDGNYALTCG-KDRTIRLWNPHRGILI--KTYKS--HGREVRDV 66
Query: 318 FDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRR 377
+ + GG D V+ +D+ TG+ I F+ VN F+ + S+ R
Sbjct: 67 HVTSDNAKFCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRS 125
Query: 378 FPVDD 382
V D
Sbjct: 126 LRVWD 130
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 61/211 (28%), Positives = 91/211 (43%)
Query: 211 YSTLKGN-KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLHGQEGGV 268
YSTL G+ K G+ + F+P+ +++ GS T ++ N + V G V
Sbjct: 95 YSTLNGHMKSGRT-----LDFNPSGEYVVS-GSNDTTVRLWDVQNENNCIKVCRGHMSHV 148
Query: 269 THVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLG 328
V+FS DG ++ + G + IL WD+RK+ Q++ + + P L
Sbjct: 149 NSVKFSPDGLWIASAGLEGS-ILIWDIRKSKQIME--FIADPPVTAITCVQFHPFEFLLA 205
Query: 329 TGGQDGLVHIYDLQTGKWISG---FQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE- 384
G DG V IYDL+ + +S F A FS + SSSG V +E
Sbjct: 206 AGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSG---ISVIGWEP 262
Query: 385 DLHLSGDENCVSVWSFLYASMMENADGINGC 415
D L ++ S WSFL + N I GC
Sbjct: 263 DREL---DHIKSTWSFLADMKVVNNKLICGC 290
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 47/212 (22%), Positives = 90/212 (42%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD+ T T + + T + A+ P+G I G + V+ +
Sbjct: 80 SSSQDGKVIVWDSFT-----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 134
Query: 202 HRPGRDFEKYSTLKGNKEGQA---GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
F+K + K+ A +SA +F+ + + S T A++ ++ +LL
Sbjct: 135 -----TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLL 189
Query: 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRI 316
HG V + S GN +GG D + WD+R Q + + + + E +
Sbjct: 190 QSFHGHGADVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG-QCI-QAFETHESDINSV 246
Query: 317 LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ PSG +G D +YDL+ + ++
Sbjct: 247 RY--YPSGDAFASGSDDATCRLYDLRADREVA 276
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 89 (36.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 48/195 (24%), Positives = 79/195 (40%)
Query: 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
+S SP H +A G I N + G + V H+QF+ DG L +
Sbjct: 964 VSCCCLSP-HLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSS 1022
Query: 285 RKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTG 344
+D I W+ + V + ++ + + R+L D R L + DG V ++++ TG
Sbjct: 1023 -EDSVIQVWNWQTEEYVFLQAHQETVK-DFRLLRD----SRLL-SWSFDGTVKVWNVITG 1075
Query: 345 KWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE---DLH-LSGDENCVSVWSF 400
+ F TV + +S+S + + FE LH L G +CV +F
Sbjct: 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAF 1135
Query: 401 -LYASMMENADGING 414
L ++ D NG
Sbjct: 1136 SLDGILLATGDD-NG 1149
Score = 87 (35.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/27 (51%), Positives = 25/27 (92%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIF 87
+++ G+ +SPDGSSFLT+S+D+T+R++
Sbjct: 883 SWVHGVMFSPDGSSFLTASDDQTIRVW 909
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 103 (41.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 48/203 (23%), Positives = 87/203 (42%)
Query: 106 DQDSYEASLVVTEGES--VYDFCWFPHMSASDPTSCV---FASTTRDHPIHLWDATTGLL 160
D D + A V+T+G + + + W SC AS + D + +WD +G
Sbjct: 45 DTDRWVAQTVLTDGHTRTIRELAW----------SCCGHYLASASFDTTVAVWDKKSGEF 94
Query: 161 RC--TYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHR-PGRD--FEKYSTL 214
C T +D +E+ SV ++ +G + +KSV ++++H P ++ +E + L
Sbjct: 95 ECNATLEGHD--NEVK---SVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVL 149
Query: 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYVLHGQEGGVTH 270
G+ + + + + P +LA SY T +YR+D E+L L V
Sbjct: 150 NGHTQD----VKKVCWHPQED-LLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWS 204
Query: 271 VQFSRDGNYLYTGGRKDPYILCW 293
+ F G L + +D + W
Sbjct: 205 ISFDATGQRLASCS-EDTTVKVW 226
Score = 58 (25.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 68 WSPDGSSFLTSSEDKTLRIFS 88
W P G F + EDKT+R+++
Sbjct: 22 WHPGGKLFASCGEDKTIRVWN 42
>ZFIN|ZDB-GENE-060929-808 [details] [associations]
symbol:dcaf5 "ddb1 and cul4 associated factor 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-808 Gene3D:2.130.10.10 SUPFAM:SSF50978
CTD:8816 KO:K11800 GeneTree:ENSGT00530000062951 EMBL:CR361558
EMBL:CABZ01003772 EMBL:CABZ01003773 EMBL:FP103009 EMBL:BC124494
IPI:IPI00503404 RefSeq:NP_001071020.1 UniGene:Dr.83785
Ensembl:ENSDART00000084867 GeneID:560257 KEGG:dre:560257
HOGENOM:HOG000205845 HOVERGEN:HBG095204 InParanoid:Q08BZ1
NextBio:20883350 Uniprot:Q08BZ1
Length = 789
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 44/168 (26%), Positives = 77/168 (45%)
Query: 244 SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVY 303
S S++Y++D + G G V ++FS +G G D +L W + KA+
Sbjct: 37 SGCSSLYKKDML-------GHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWHMEKAIHSRA 89
Query: 304 KLYR-SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSF 362
K + EH + + + + + +GG D V ++D++ G+ ++ F D V G S
Sbjct: 90 KPMKLKGEHLSNIFCLAFDSTNKRVFSGGNDEQVILHDVERGETLNVF-LHDDAVYGLSV 148
Query: 363 HPFLP-MAASSSGHRRFPV-DDFEDLHLSGDENCVSVWSFLYASMMEN 408
P + ASSS R + D E H G+ C++ + + S+M N
Sbjct: 149 SPVNDNVFASSSDDGRVLIWDTREPPH--GEPFCLANYPSAFHSVMFN 194
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 47/212 (22%), Positives = 90/212 (42%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD+ T T + + T + A+ P+G I G + V+ +
Sbjct: 122 SSSQDGKVIVWDSFT-----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 176
Query: 202 HRPGRDFEKYSTLKGNKEGQA---GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
F+K + K+ A +SA +F+ + + S T A++ ++ +LL
Sbjct: 177 -----TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLL 231
Query: 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRI 316
HG V + S GN +GG D + WD+R Q + + + + E +
Sbjct: 232 QSFHGHGADVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG-QCI-QAFETHESDINSV 288
Query: 317 LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ PSG +G D +YDL+ + ++
Sbjct: 289 RY--YPSGDAFASGSDDATCRLYDLRADREVA 318
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 100 (40.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 263 GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEP 322
G +G VT V F ++G ++YTG +D + WDL+ + Y S N +L P
Sbjct: 74 GHKGNVTGVGFQKEGKWMYTGS-EDGTVKIWDLK--APGCQRDYECSAPVNTVVL---HP 127
Query: 323 SGRHLGTGGQDGLVHIYDL 341
+ L +G Q+G + ++DL
Sbjct: 128 NQAELISGDQNGSIRVWDL 146
Score = 59 (25.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVF 199
+ A+ + DH I WD +G C YR+ D + + + I A N R+F
Sbjct: 5 ILATASYDHTIKFWDPPSG--GC-YRSIDCGEFHINRLEITHDKL--YIAAAGNPQTRLF 59
Query: 200 DVHR----PGRDFEKYSTLKGNKEG 220
+V+ P F+ + KGN G
Sbjct: 60 EVNTNNNSPAMSFDGH---KGNVTG 81
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 105 (42.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 35/158 (22%), Positives = 70/158 (44%)
Query: 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD-EITAAFSVAFNPTGTKIFAG 191
A P + A+ + D + +WD T G C + D + +SVAF+P G + G
Sbjct: 436 AISPDTKYVAAGSLDKSVRVWDLTQG---CPVERLEGPDGHKDSVYSVAFSPNGRDLVTG 492
Query: 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNK-----EGQAGIMSAIAFSPTHTGMLAIGSYSQ 245
+K+++++++ P + + + KG + EG + ++A +P + +++ GS +
Sbjct: 493 SLDKTIKLWELATPRGNMQNQGS-KGGRCVKTFEGHRDFVLSVALTPDNQWVMS-GSKDR 550
Query: 246 TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283
+ +L G + V V S G + TG
Sbjct: 551 GVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATG 588
Score = 62 (26.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSL 89
+++ + +SPDG T +EDK +R++ +
Sbjct: 348 YIRSVCFSPDGKYLATGAEDKQIRVWDI 375
>ZFIN|ZDB-GENE-030131-6176 [details] [associations]
symbol:mlst8 "MTOR associated protein, LST8
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-6176 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 KO:K08266 CTD:64223
GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 EMBL:BC044176 EMBL:BC068352
IPI:IPI00508476 RefSeq:NP_956171.1 UniGene:Dr.7298
ProteinModelPortal:Q803V5 STRING:Q803V5 Ensembl:ENSDART00000012743
Ensembl:ENSDART00000148326 GeneID:792689 KEGG:dre:792689
InParanoid:Q803V5 OMA:NNKGNCY NextBio:20931153 ArrayExpress:Q803V5
Bgee:Q803V5 Uniprot:Q803V5
Length = 326
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 41/156 (26%), Positives = 69/156 (44%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++++ +P + M+A Y Q +
Sbjct: 18 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNSLEVTPDRS-MIAAAGY-QHIRM 67
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G +T V F DG ++YTGG +D WDLR ++++
Sbjct: 68 YDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGG-EDCMARIWDLRSRNLQCQRIFQ 126
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+ N L P+ L G Q G++HI+DL+T
Sbjct: 127 VNAPINCVCL---HPNQAELIVGDQSGVIHIWDLKT 159
>POMBASE|SPBC29A3.06 [details] [associations]
symbol:SPBC29A3.06 "CGI-48 family (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC29A3.06 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GO:GO:0006364 GO:GO:0032040 KO:K14553 EMBL:D89098 PIR:T40077
PIR:T42005 RefSeq:NP_595834.2 ProteinModelPortal:P78750
STRING:P78750 GeneID:2540529 KEGG:spo:SPBC29A3.06
HOGENOM:HOG000162649 OMA:GHEETQR OrthoDB:EOG4QZBW7 NextBio:20801656
Uniprot:P78750
Length = 519
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 222 AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--ELLYVLHGQEGGVTHVQFSRDGNY 279
+GI ++ P +L G + +T IY+ D L+ LH + + F DG
Sbjct: 218 SGIR-CMSIHPYFPLLLTCG-FDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGKR 275
Query: 280 LYTGGRKDPYILCWDLRKA-VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
+ GR+ Y+ WDL A VQ V ++Y F ++P+G+++ G+ G +++
Sbjct: 276 VIAAGRRK-YMYIWDLESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINL 334
Query: 339 YDLQTGKWISGFQ 351
TG++ + F+
Sbjct: 335 LHALTGQFATSFK 347
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 110 (43.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPG 205
D + LWD TTGL T R + V SVAF+ +I +G +K++++++
Sbjct: 84 DGTLRLWDLTTGL---TTRRF--VGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNT---- 134
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQTSAIYREDNMELLYVLHGQ 264
KY T++ EG +S + FSP + + + + + ++ N +L G
Sbjct: 135 LGVCKY-TIQD--EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGH 191
Query: 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297
G + V S DG+ +GG KD + WDL +
Sbjct: 192 TGYLNTVTVSPDGSLCASGG-KDGQAMLWDLNE 223
Score = 48 (22.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 70 PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT-EGESVYDFCW 127
PD L++S DK++ ++ L + +Y + SL K + + +V++ +G+ W
Sbjct: 28 PD--MILSASRDKSIIMWKLTRDETNYGIPQRSL-KGHSHFVSDVVISSDGQFALSGAW 83
Score = 45 (20.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSL 89
++F+ + S DG L+ + D TLR++ L
Sbjct: 63 SHFVSDVVISSDGQFALSGAWDGTLRLWDL 92
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 120 (47.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 47/181 (25%), Positives = 76/181 (41%)
Query: 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYR-EDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282
++ + F+P + +L S +T ++ +D+ ++ VL G + V FS D + L +
Sbjct: 172 VVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCS 231
Query: 283 GGRKDPYILCWDLRKAVQVVYKLYRSSE-HTNQRILFDIEPSGRHLGTGGQDGLVHIYDL 341
G L WD+ K Y + R E H + + D P G L T D V+I+D
Sbjct: 232 VGASKAVFL-WDMDK-----YTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWDP 285
Query: 342 QTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDF--EDLHLSG--DENCVSV 397
TG + F G F P P+ A + R F + LH++ D+ V
Sbjct: 286 HTGDILMEF--------GHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLADDKMVRF 337
Query: 398 W 398
W
Sbjct: 338 W 338
Score = 41 (19.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 66 IKWSPDGSSFLTSSEDKTLRI 86
+ ++PDGS F S +T+++
Sbjct: 40 VAFAPDGSYFAWSQGHRTVKL 60
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 101 (40.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 141 FA-STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-NKSVRV 198
FA S + D + LWD TTG T R + V SVAF+ +I +G +K++++
Sbjct: 36 FALSGSWDGTLRLWDLTTGT---TTRRF--VGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 90
Query: 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQTSAIYREDNMEL 257
++ KY+ E + +S + FSP + + + + + ++ N +L
Sbjct: 91 WNT----LGVCKYTV---QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 143
Query: 258 LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297
G G + V S DG+ +GG KD + WDL +
Sbjct: 144 KTNHIGHTGYLNTVTVSPDGSLCASGG-KDGQAMLWDLNE 182
Score = 48 (22.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSL 89
++F+ + S DG L+ S D TLR++ L
Sbjct: 22 SHFVSDVVISSDGQFALSGSWDGTLRLWDL 51
>SGD|S000005131 [details] [associations]
symbol:SWT21 "Protein involved in mRNA splicing" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IMP]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR015943 SGD:S000005131 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BK006947 GO:GO:0000398
OrthoDB:EOG44QX9D EMBL:Z71463 PIR:S63142 RefSeq:NP_014212.1
ProteinModelPortal:P53873 SMR:P53873 DIP:DIP-971N IntAct:P53873
MINT:MINT-483287 STRING:P53873 EnsemblFungi:YNL187W GeneID:855534
KEGG:sce:YNL187W CYGD:YNL187w eggNOG:NOG42241 OMA:FGIRQYL
NextBio:979589 Genevestigator:P53873 GermOnline:YNL187W
Uniprot:P53873
Length = 357
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 59/278 (21%), Positives = 111/278 (39%)
Query: 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDF 125
I WS DG+SF++ D +R + +PE + +N L + +V+ +
Sbjct: 10 IFWSCDGTSFVSVHNDFGIRQYLVPEESNTDKLNRNLLLPFTRFFRNQSIVSCAIDPFYT 69
Query: 126 CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN--- 182
+ + V ++ P+ L+ G +C +YD +++I + ++
Sbjct: 70 LYNENSDRLAGDRIVVGG--KNFPLQLYSLMDG--QCIL-SYDTMNKINGEYETVYSVKI 124
Query: 183 PTGTKIFAGYNKS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-----HTG 236
++++ G ++ V ++D R + ST K +K G+ I+S P G
Sbjct: 125 DVESRVYTGSCRNKVAIYDKSRRDAVWMNQSTKKASK-GRQSIISCFEEQPMGGQALSRG 183
Query: 237 MLAIGSYSQT--SAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294
L GSY+ R +E L GG+ + S +G Y+Y R I +D
Sbjct: 184 SLLCGSYANEMFQVDCRHQRLERLNYTRTVAGGIVQILTSDNGRYVYVVRRNSDAISIYD 243
Query: 295 LRKAVQV--VYKLYRSSEHTNQRILFDIEPS-GRHLGT 329
R V +L H + ++ I+ + G +GT
Sbjct: 244 RRNLQHELNVLRLPFRIHHNSAKLKAYIDTAYGLSMGT 281
>UNIPROTKB|Q29HG9 [details] [associations]
symbol:GA15597 "Protein LST8 homolog" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH379064 KO:K08266 OMA:NNKGNCY OrthoDB:EOG473N6W
RefSeq:XP_001354734.1 ProteinModelPortal:Q29HG9 GeneID:4815233
KEGG:dpo:Dpse_GA15597 FlyBase:FBgn0075614 InParanoid:Q29HG9
Uniprot:Q29HG9
Length = 315
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 40/157 (25%), Positives = 76/157 (48%)
Query: 191 GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250
GY+ +++V+ H G + T++ + Q ++A+ +P T + A G Y Q +Y
Sbjct: 11 GYDHTIKVWQAHT-GNCIK---TMRFVETSQ---VNALDRTPDKTRLAACG-Y-QCIRLY 61
Query: 251 R-EDNMELLYV-LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRS 308
E N + G + VT + F DGN+++T G +D ++ WD+ A +++
Sbjct: 62 DLESNCTAPVINFDGVQKNVTRLGFQEDGNWMFTAG-EDHHVRIWDMISAPPHCSRVFDC 120
Query: 309 SEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGK 345
N L P+ +G G Q+G V ++D+++ K
Sbjct: 121 ESPVNAACL---HPNQVEIGMGSQNGNVFLWDVKSEK 154
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 53/205 (25%), Positives = 93/205 (45%)
Query: 179 VAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM 237
VA+NP GT + G ++++R++ + G +E L +G + +A+SP
Sbjct: 22 VAWNPAGTTLATCGGDRAIRIWG--KEGDSWECKCVLS---DGHQRTVRKVAWSPCGK-Y 75
Query: 238 LAIGSYSQTSAIYR--EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295
LA S+ T+ I++ +++ E L VL G E V V ++ G+ L T R D + W++
Sbjct: 76 LASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSR-DKSVWIWEV 134
Query: 296 RKAVQVVYK-LYRSSEHTNQRILFDI-EPSGRHLGTGGQDGLVHIYDLQTGKWI--SGFQ 351
+ + Y+ L + HT Q + + P+ L + D + IY + W + +
Sbjct: 135 DEEDE--YECLSVVNSHT-QDVKHVVWHPTQELLASASYDNKICIYKEEDDDWECRATLE 191
Query: 352 AAADTVNGFSFHPFLPMAASSSGHR 376
TV +F P AS S R
Sbjct: 192 GHESTVWSLTFDPEGRRLASCSDDR 216
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 45/181 (24%), Positives = 77/181 (42%)
Query: 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252
+K +R ++ H F +Y TL G+++ ++ ++ SP +A S T I+
Sbjct: 32 HKRIRNYESHS---GFSEYCTLFGHEKS----VTCVSVSPNKR-WIATSSSDGTIKIWSA 83
Query: 253 DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHT 312
L L G G++ V+++ YL + D I WD K V + + HT
Sbjct: 84 LTFRLECTLFGHYRGISQVKWATGSKYLASAS-DDKTIRIWDFEKRCSV--RCLKG--HT 138
Query: 313 NQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASS 372
N D P G L +G D V I++LQ G + A ++ + S + A++
Sbjct: 139 NYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATA 198
Query: 373 S 373
S
Sbjct: 199 S 199
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 127 (49.8 bits), Expect = 0.00040, P = 0.00040
Identities = 55/200 (27%), Positives = 90/200 (45%)
Query: 173 ITAAFSVAFNPTGTKIFAGYNKS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFS 231
+++ + VAF+ TG +IF G + V+++ H GR F +TL+G+ A I S +A +
Sbjct: 189 LSSVYCVAFDRTGHRIFTGSDDCLVKIWSTHN-GRLF---ATLRGHS---AEI-SDMAVN 240
Query: 232 PTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSR--DGNYLY---TGGRK 286
+T M+A GS + ++ + VLHG G +T +QFS G+ Y TG
Sbjct: 241 YENT-MIAAGSCDKMIRVWCLRTCAPVAVLHGHTGSITSLQFSPMVKGSLRYMVSTGADG 299
Query: 287 DPYILCWDL--RKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDL--Q 342
+ WD K K Q + G L TG D ++ +Y +
Sbjct: 300 NVCFWQWDTDSMKFSNRPVKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYYFGSE 359
Query: 343 TGKWISGFQAAADTVNGFSF 362
T + I+ ++ AD V+ F
Sbjct: 360 TPERIAELESHADKVDSIQF 379
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 68/312 (21%), Positives = 134/312 (42%)
Query: 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGI-------SYDVNACSLAKDQD 108
+S+ +K K+S + L ++ + +F + + S VN CSL+ D +
Sbjct: 1694 ASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGN 1753
Query: 109 -----SYEASLVV---TEGESVYDF-----CWFPHMSASDPTSCVFASTTRDHPIHLWDA 155
S +A+ V T G + +F CW + A PT + A D + L+D
Sbjct: 1754 YIVTGSDDATAKVWSSTLGTQLTNFLIPGDCW-ANCLAFSPTQPLLAVGATDCTVRLFDV 1812
Query: 156 TTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYST 213
++ + YR + T A S+ F+P+G I + + ++V++V + Y+
Sbjct: 1813 SSNTI---YREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAE---YTI 1866
Query: 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273
K + + ++ I+F+PT+ L S ++ ++ G + H +
Sbjct: 1867 EKAHNDP----INCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVY 1922
Query: 274 SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQD 333
S DG Y+ T R D I + L + +++++L HT+ P + L +GG D
Sbjct: 1923 SPDGKYIATVSR-DCSIAVY-LCSSKKLLFRL---KGHTDWVNFCTFSPDSKKLVSGGWD 1977
Query: 334 GLVHIYDLQTGK 345
+ +++++T K
Sbjct: 1978 FNLRVWNIKTQK 1989
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 95 (38.5 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G +++ + FSP + ++A S+ ++ ++ + L L G V + +S D
Sbjct: 370 GHQALINQVLFSPD-SRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L +G D + WD+ KA ++ L H ++ D P G+ + +GG+D + I+
Sbjct: 429 LVSGS-SDSTLKVWDV-KAQKLATDL---PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 61 (26.5 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 127 WFP-HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG 185
W P HM+ P AS+++D + +WD T G RC +T + + G
Sbjct: 207 WEPLHMN---PECRYVASSSKDGSVRVWDTTAG--RCERILTGHTQSVTC---LRWGGDG 258
Query: 186 TKIFAGYNKSVRVFDVH 202
A +++++V+ H
Sbjct: 259 LLYSASQDRTIKVWRAH 275
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGI 94
+++ I WSPDG + ++ + ++ P G+
Sbjct: 157 HWVLSISWSPDGKKLASGCKNGQVLLWD-PSTGL 189
Score = 42 (19.8 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 27 ENQQEYTWPLIRFDVPPHRTYHFYNQFR-TSSIPNNF--LKGIKWSPDGSSFLTSSEDKT 83
E+Q T ++ P + R TSS+ + + + +SP G + S D T
Sbjct: 78 ESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTT 137
Query: 84 LRIFSL 89
+R + L
Sbjct: 138 VRFWDL 143
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 96 (38.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G +++ + FSP + ++A S+ ++ ++ + L L G V + +S D
Sbjct: 321 GHQALINQVLFSPD-SRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 379
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L +G D + WD+ KA ++ L H ++ D P G+ + +GG+D + I+
Sbjct: 380 LVSGS-SDSTLKVWDV-KAQKLAADL---PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 58 (25.5 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT 186
W P + A+ P AS+++D + +WD T G RC +T + + G
Sbjct: 158 WEP-LHAN-PECRYMASSSKDGSVRVWDTTAG--RCERILTGHTQSVTC---LRWGGDGL 210
Query: 187 KIFAGYNKSVRVFDVH 202
A +++++V+ H
Sbjct: 211 LYSASQDRTIKVWRAH 226
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+++ I WSPDG + + ++ + ++ P G
Sbjct: 108 HWVLSISWSPDGKTLASGCKNGQILLWD-PSTG 139
Score = 43 (20.2 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 18 DTEVTEA---AQENQQEYTWPLIRFDVPPHRTYHFYNQFR-TSSIPNNF--LKGIKWSPD 71
D E+T + E+Q T ++ P + R TSS+ + + + +SP
Sbjct: 17 DAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPT 76
Query: 72 GSSFLTSSEDKTLRIFSL 89
G + S D T+R + L
Sbjct: 77 GKYLASGSGDTTVRFWDL 94
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD+ T T + + T + A+ P+G I G + V+ +
Sbjct: 80 SSSQDGKVIVWDSFT-----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 134
Query: 202 HRPGRDFEKYSTLKGNKEGQA---GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
F+K + K+ A +SA +F+ + +L S T A++ ++ +LL
Sbjct: 135 -----TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILT-ASGDGTCALWDVESGQLL 188
Query: 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRI 316
HG V + S GN +GG D + WD+R Q V + + + E +
Sbjct: 189 QSFHGHGADVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG-QCV-QAFETHESDINSV 245
Query: 317 LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ PSG +G D +YDL+ + ++
Sbjct: 246 RY--YPSGDAFASGSDDATCRLYDLRADREVA 275
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD+ T T + + T + A+ P+G I G + V+ +
Sbjct: 80 SSSQDGKVIVWDSFT-----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 134
Query: 202 HRPGRDFEKYSTLKGNKEGQA---GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
F+K + K+ A +SA +F+ + +L S T A++ ++ +LL
Sbjct: 135 -----TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILT-ASGDGTCALWDVESGQLL 188
Query: 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRI 316
HG V + S GN +GG D + WD+R Q V + + + E +
Sbjct: 189 QSFHGHGADVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG-QCV-QAFETHESDINSV 245
Query: 317 LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ PSG +G D +YDL+ + ++
Sbjct: 246 RY--YPSGDAFASGSDDATCRLYDLRADREVA 275
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD+ T T + + T + A+ P+G I G + V+ +
Sbjct: 80 SSSQDGKVIVWDSFT-----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 134
Query: 202 HRPGRDFEKYSTLKGNKEGQA---GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
F+K + K+ A +SA +F+ + +L S T A++ ++ +LL
Sbjct: 135 -----TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILT-ASGDGTCALWDVESGQLL 188
Query: 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRI 316
HG V + S GN +GG D + WD+R Q V + + + E +
Sbjct: 189 QSFHGHGADVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG-QCV-QAFETHESDVNSV 245
Query: 317 LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ PSG +G D +YDL+ + ++
Sbjct: 246 RY--YPSGDAFASGSDDATCRLYDLRADREVA 275
>MGI|MGI:1929514 [details] [associations]
symbol:Mlst8 "MTOR associated protein, LST8 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0030838
"positive regulation of actin filament polymerization"
evidence=IMP] [GO:0031931 "TORC1 complex" evidence=ISO] [GO:0031932
"TORC2 complex" evidence=ISO] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=ISO] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IMP] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=ISO] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1929514 GO:GO:0005829 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 GO:GO:0031931 GO:GO:0031932 KO:K08266 GO:GO:0032008
CTD:64223 GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 OMA:NNKGNCY EMBL:AF237676
EMBL:AK002751 EMBL:AK038515 EMBL:AK040100 EMBL:AK048102
EMBL:AK077680 EMBL:AK083731 EMBL:BC015279 IPI:IPI00458055
RefSeq:NP_001239392.1 RefSeq:NP_001239393.1 RefSeq:NP_001239394.1
RefSeq:NP_064372.2 UniGene:Mm.289516 ProteinModelPortal:Q9DCJ1
SMR:Q9DCJ1 IntAct:Q9DCJ1 STRING:Q9DCJ1 PhosphoSite:Q9DCJ1
PaxDb:Q9DCJ1 PRIDE:Q9DCJ1 Ensembl:ENSMUST00000070888
Ensembl:ENSMUST00000179163 GeneID:56716 KEGG:mmu:56716
UCSC:uc008awg.2 InParanoid:Q9DCJ1 NextBio:313187 Bgee:Q9DCJ1
Genevestigator:Q9DCJ1 Uniprot:Q9DCJ1
Length = 326
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 41/156 (26%), Positives = 67/156 (42%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++A+ +P + M+A Y Q +
Sbjct: 18 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNALEITPDRS-MIAAAGY-QHIRM 67
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G + V F DG ++YTGG +D WDLR ++++
Sbjct: 68 YDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGG-EDCTARIWDLRSRNLQCQRIFQ 126
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+ N L P+ L G Q G +HI+DL+T
Sbjct: 127 VNAPINCVCL---HPNQAELIVGDQSGAIHIWDLKT 159
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 86 (35.3 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 40/153 (26%), Positives = 68/153 (44%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
A ++ ++RV+DV STL GNK + + I++SP LA GS + +
Sbjct: 274 ASWDHTIRVWDVESGSLK----STLTGNK-----VFNCISYSPL-CKRLASGSTDRHIRL 323
Query: 250 Y--REDNMELLYV-LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLY 306
+ R + L+ + L G VT +++S G D + WD R +Y L
Sbjct: 324 WDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDL- 382
Query: 307 RSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
+ H ++ + D +G L +GG D ++ Y
Sbjct: 383 --AAHEDKVLSVDWTDTGLLL-SGGADNKLYSY 412
Score = 62 (26.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV-DEI 173
+V + V D W D SC+ S++ D I LW+ + R +A
Sbjct: 136 IVGHTDVVKDVAWVK----KDNLSCLLLSSSMDQTILLWE--WNVERNKVKALHCCRGHA 189
Query: 174 TAAFSVAFNPTGTKIFAG-YNKSVRVF 199
+ S+A + TGTK +G ++K ++++
Sbjct: 190 GSVDSIAVDSTGTKFCSGSWDKMLKIW 216
Score = 51 (23.0 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 76 LTSSEDKTLRIFSLPENGISYDVNACSLAKD 106
LT S DKT RI+SL I V + KD
Sbjct: 115 LTGSYDKTSRIWSLEGKSIMTIVGHTDVVKD 145
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 93 (37.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 46/194 (23%), Positives = 75/194 (38%)
Query: 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
+S SP H LA GS + N L + V H+QF+ DG + +
Sbjct: 964 VSCCCLSP-HLQYLAFGSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSS 1022
Query: 285 RKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTG 344
D I W+ + V + ++ + F + + R L + DG V ++++ TG
Sbjct: 1023 -DDSAIQVWNWQSEETVSLQAHQETVKD-----FRLLKNSRLL-SWSFDGTVKVWNIITG 1075
Query: 345 KWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE---DLH-LSGDENCVSVWSF 400
+ F DTV P +S+S + + F+ LH L G + CV +F
Sbjct: 1076 RIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAF 1135
Query: 401 LYASMMENADGING 414
S + NG
Sbjct: 1136 SVDSTLLATGDDNG 1149
Score = 79 (32.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 68 WSPDGSSFLTSSEDKTLRIF 87
+SPDGSSFLTSS+D+T+R++
Sbjct: 890 FSPDGSSFLTSSDDETIRLW 909
>TAIR|locus:2119141 [details] [associations]
symbol:CDC20.2 "AT4G33260" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514
EMBL:AF029263 IPI:IPI00519553 PIR:T05977 RefSeq:NP_195052.1
UniGene:At.48930 ProteinModelPortal:Q9S7I8 SMR:Q9S7I8 STRING:Q9S7I8
EnsemblPlants:AT4G33260.1 GeneID:829462 KEGG:ath:AT4G33260
TAIR:At4g33260 InParanoid:Q9S7I8 OMA:AVALDNC PhylomeDB:Q9S7I8
ProtClustDB:CLSN2915879 ArrayExpress:Q9S7I8 Genevestigator:Q9S7I8
Uniprot:Q9S7I8
Length = 447
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 55/204 (26%), Positives = 84/204 (41%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS-VRVFDVHRPG 205
DH ++LWDA+TG T +E S+ + P G + G N S V+++D
Sbjct: 149 DHTVYLWDASTG---STSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD----S 201
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265
+ TLKG + + G ++ T GM G R +E Y H QE
Sbjct: 202 ASNRQLRTLKGGHQSRVGSLAWNNHILTTGGM--DGLIINNDVRIRSPIVET-YRGHTQE 258
Query: 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWD--LRKAVQVVYKLYRSSEHTNQRILFDIEPS 323
V +++S G L +GG D + WD + + L+R EHT+ P
Sbjct: 259 --VCGLKWSGSGQQLASGGN-DNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPF 315
Query: 324 GRHL---GTGGQDGLVHIYDLQTG 344
+L G GG D + ++ TG
Sbjct: 316 QANLLATGGGGGDRTIKFWNTHTG 339
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 52/203 (25%), Positives = 90/203 (44%)
Query: 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-GTKIFAGYNKSVRVFD 200
A+ + D I ++DA T L + A+ D I S+ +PT I A ++ +RV+D
Sbjct: 165 ATASDDQQIRIFDAETFSLINEFTAHS--DFIR---SLTVHPTLPYLISASDDRKIRVWD 219
Query: 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV 260
R +++ + A + IA +P M GS +T +++ E +
Sbjct: 220 WENEWRMEQEF-------QEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICT 272
Query: 261 LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDI 320
L G E GV V+F G + G D I WD++ Q + +++ H N + F +
Sbjct: 273 LEGHEKGVNCVEFLTGGRIV--SGSDDCSICVWDIQ--TQKCIETLKNA-HKNN-VTF-V 325
Query: 321 EPSGRHLGTGGQDGLVHIYDLQT 343
P + +G +D V I++ QT
Sbjct: 326 TPFKTWIISGAEDSTVKIWNSQT 348
>TAIR|locus:2119151 [details] [associations]
symbol:CDC20.1 "AT4G33270" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSN2915879 EMBL:BT026138 IPI:IPI00524152 PIR:T05978
RefSeq:NP_195053.1 UniGene:At.368 SMR:Q9SZA4 IntAct:Q9SZA4
STRING:Q9SZA4 EnsemblPlants:AT4G33270.1 GeneID:829463
KEGG:ath:AT4G33270 TAIR:At4g33270 InParanoid:Q9SZA4
Genevestigator:Q9SZA4 Uniprot:Q9SZA4
Length = 457
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 55/204 (26%), Positives = 84/204 (41%)
Query: 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS-VRVFDVHRPG 205
DH ++LWDA+TG T +E S+ + P G + G N S V+++D
Sbjct: 159 DHTVYLWDASTG---STSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD----S 211
Query: 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265
+ TLKG + + G ++ T GM G R +E Y H QE
Sbjct: 212 ASNRQLRTLKGGHQSRVGSLAWNNHILTTGGM--DGLIINNDVRIRSPIVET-YRGHTQE 268
Query: 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWD--LRKAVQVVYKLYRSSEHTNQRILFDIEPS 323
V +++S G L +GG D + WD + + L+R EHT+ P
Sbjct: 269 --VCGLKWSGSGQQLASGGN-DNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPF 325
Query: 324 GRHL---GTGGQDGLVHIYDLQTG 344
+L G GG D + ++ TG
Sbjct: 326 QANLLATGGGGGDRTIKFWNTHTG 349
>ASPGD|ASPL0000068374 [details] [associations]
symbol:AN7705 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001304 EMBL:AACD01000131
HOGENOM:HOG000174258 KO:K13137 RefSeq:XP_680974.1
ProteinModelPortal:Q5AVH5 STRING:Q5AVH5
EnsemblFungi:CADANIAT00000837 GeneID:2869479 KEGG:ani:AN7705.2
OMA:LFDFHTG OrthoDB:EOG4PRX0H Uniprot:Q5AVH5
Length = 340
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 66/246 (26%), Positives = 91/246 (36%)
Query: 70 PDGSSFLTSSEDKTLRIFSLPENGI-SYDVNACSL--AKDQDSYEASLVV---TEGESVY 123
P T +K LRIF L +G S A S A+D S S + G ++
Sbjct: 116 PSPQVLATGGYEKKLRIFDLTRSGSNSSSPTASSAPPAEDGTSSATSYEIGPGAHGGTIK 175
Query: 124 DFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP 183
W + + + D I WD + Y + ++A P
Sbjct: 176 SIVWNRDYN-------ILTTAADDRKIRWWDLRSRHPVVEYPVEGNIGSCELN-TLATRP 227
Query: 184 TGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242
T I + KSV +FD H PGR +K G + A + + T L GS
Sbjct: 228 NDTGILSVAAGKSVYLFDGHTPGRLLKKIDF--GYEVASAAVNN-------DTARLVTGS 278
Query: 243 YSQTSA-IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301
T A +Y + L V G G + V FS DG LY G +D I W KA +
Sbjct: 279 ADDTWARVYDLHTDDELEVQKGHHGPIWSVSFSPDGK-LYGTGSEDGTIKLW---KACRE 334
Query: 302 VYKLYR 307
Y L+R
Sbjct: 335 PYGLWR 340
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD+ T T + + T + A+ P+G I G + V+ +
Sbjct: 122 SSSQDGKVIVWDSFT-----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 176
Query: 202 HRPGRDFEKYSTLKGNKEGQA---GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
F+K + K+ A +SA +F+ + +L S T A++ ++ +LL
Sbjct: 177 -----TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILT-ASGDGTCALWDVESGQLL 230
Query: 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRI 316
HG V + S GN +GG D + WD+R Q V + + + E +
Sbjct: 231 QSFHGHGADVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG-QCV-QAFETHESDINSV 287
Query: 317 LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ PSG +G D +YDL+ + ++
Sbjct: 288 RY--YPSGDAFASGSDDATCRLYDLRADREVA 317
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD+ T T + + T + A+ P+G I G + V+ +
Sbjct: 122 SSSQDGKVIVWDSFT-----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 176
Query: 202 HRPGRDFEKYSTLKGNKEGQA---GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258
F+K + K+ A +SA +F+ + +L S T A++ ++ +LL
Sbjct: 177 -----TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILT-ASGDGTCALWDVESGQLL 230
Query: 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRI 316
HG V + S GN +GG D + WD+R Q V + + + E +
Sbjct: 231 QSFHGHGADVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG-QCV-QAFETHESDVNSV 287
Query: 317 LFDIEPSGRHLGTGGQDGLVHIYDLQTGKWIS 348
+ PSG +G D +YDL+ + ++
Sbjct: 288 RY--YPSGDAFASGSDDATCRLYDLRADREVA 317
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 87 (35.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 14/27 (51%), Positives = 25/27 (92%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIF 87
+++ G+ +SPDGSSFLT+S+D+T+R++
Sbjct: 883 SWVHGVMFSPDGSSFLTASDDQTIRVW 909
Score = 85 (35.0 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 47/195 (24%), Positives = 78/195 (40%)
Query: 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284
+S SP H +A G I N + G + V H+QF+ DG L +
Sbjct: 964 VSCCCLSP-HLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS 1022
Query: 285 RKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTG 344
+D I W+ + V + ++ + + R+L D R L + DG V ++++ TG
Sbjct: 1023 -EDSVIQVWNWQTGDYVFLQAHQETVK-DFRLLQD----SRLL-SWSFDGTVKVWNVITG 1075
Query: 345 KWISGFQAAADTVNGFSFHPFLPMAASSSGHRRFPVDDFE---DLH-LSGDENCVSVWSF 400
+ F TV + +S+S + + F+ LH L G CV +F
Sbjct: 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAF 1135
Query: 401 -LYASMMENADGING 414
L ++ D NG
Sbjct: 1136 SLDGILLATGDD-NG 1149
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 95 (38.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G +++ + FSP + ++A S+ ++ ++ + L L G V + +S D
Sbjct: 372 GHQALINQVLFSPD-SRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 430
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L +G D + WD+ KA ++ L H ++ D P G+ + +GG+D + I+
Sbjct: 431 LVSGS-SDSTLKVWDV-KAQKLTTDL---PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 61 (26.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 127 WFP-HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG 185
W P HM+ P AS+++D + +WD T G RC +T + + G
Sbjct: 209 WEPLHMN---PECRYVASSSKDGSVRVWDTTAG--RCERILTGHTQSVTC---LRWGGDG 260
Query: 186 TKIFAGYNKSVRVFDVH 202
A +++++V+ H
Sbjct: 261 LLYSASQDRTIKVWRAH 277
Score = 44 (20.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+++ I WSPDG + ++ + ++ P G
Sbjct: 159 HWVLSISWSPDGKKLASGCKNGQILLWD-PSTG 190
Score = 42 (19.8 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 27 ENQQEYTWPLIRFDVPPHRTYHFYNQFR-TSSIPNNF--LKGIKWSPDGSSFLTSSEDKT 83
E+Q T ++ P + R TSS+ + + + +SP G + S D T
Sbjct: 80 ESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTT 139
Query: 84 LRIFSL 89
+R + L
Sbjct: 140 VRFWDL 145
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 35/152 (23%), Positives = 65/152 (42%)
Query: 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQ 272
+++G E + + S ++ +P H+ + A G I+ E + L G + + +
Sbjct: 53 SVQGFFEHKDSVFS-VSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAID 111
Query: 273 FSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQ 332
+S DG Y+ TGG D + W K+ ++ + E ++ + P G L G
Sbjct: 112 WSFDGTYIATGGM-DSQVRLW---KS-STGFEFITAFETVDEIVWLSWHPKGLFLAAGCN 166
Query: 333 DGLVHIYDLQTGKWISGFQAAADTVNGFSFHP 364
DG + ++ L +GK + VN F P
Sbjct: 167 DGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIP 198
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 239 AIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298
A S+ +T+ ++ D L + G V V+F + NYL TG D + W ++
Sbjct: 400 ASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGST-DKTVRLWSTQQG 458
Query: 299 VQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVN 358
V +L+ H + P+G++L + G+D + ++DL +G + D +
Sbjct: 459 NSV--RLFTG--HRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNIT 514
Query: 359 GFSFHPFLPMAASSS 373
+F P + AS+S
Sbjct: 515 SLTFSPDSSLIASAS 529
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 92 (37.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 51/254 (20%), Positives = 107/254 (42%)
Query: 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDV 201
AS+++D I +WD + + C Y + ++ V + G ++++VRV+D+
Sbjct: 252 ASSSKDGTIKIWDTVSRV--CQYTMSGHTNSVSC---VKWGGQGLLYSGSHDRTVRVWDI 306
Query: 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261
+ GR + LK + A ++ ++ S + L IG++ T + E
Sbjct: 307 NSQGRCI---NILKSH----AHWVNHLSLSTDYA--LRIGAFDHTGK--KPSTPE----- 350
Query: 262 HGQEGGVTHVQ--FSRDGNY--LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRIL 317
Q+ + + + ++GN + D + W+ K+ + + ++ + N +
Sbjct: 351 EAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNH-VA 409
Query: 318 FDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSSGHRR 377
F P GR++ + D + ++D + GK+IS F+ +V ++ + S S
Sbjct: 410 FS--PDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTT 467
Query: 378 FPVDDFEDLHLSGD 391
V D LS D
Sbjct: 468 LKVWDVRTRKLSVD 481
Score = 71 (30.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
N++ + WSPDG T S D T+R++ P++G
Sbjct: 187 NWVLCVSWSPDGEVIATGSMDNTIRLWD-PKSG 218
>TAIR|locus:2139335 [details] [associations]
symbol:AT4G03020 "AT4G03020" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GO:GO:0080008 KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135
OMA:RMLHQRE EMBL:AY099735 EMBL:BT000357 IPI:IPI00532225
RefSeq:NP_001190666.1 RefSeq:NP_192211.2 UniGene:At.34236
ProteinModelPortal:Q8LPI5 SMR:Q8LPI5 IntAct:Q8LPI5 STRING:Q8LPI5
PaxDb:Q8LPI5 PRIDE:Q8LPI5 EnsemblPlants:AT4G03020.1
EnsemblPlants:AT4G03020.2 GeneID:828111 KEGG:ath:AT4G03020
TAIR:At4g03020 InParanoid:Q8LPI5 PhylomeDB:Q8LPI5
ProtClustDB:CLSN2690277 Genevestigator:Q8LPI5 Uniprot:Q8LPI5
Length = 493
Score = 83 (34.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 56/238 (23%), Positives = 98/238 (41%)
Query: 67 KWSPDGSSFLTSSEDKTLRIFSLPENG--ISYDVNACSLAKDQDSYEASLVVTEGESVYD 124
++S DGS F+ + +RI+++ E G + D+ A SL + SL + VY
Sbjct: 133 QFSTDGSLFIAGFQGSRIRIYNV-EKGWKVQKDILAKSLRWTVT--DTSLSPDQRNLVYA 189
Query: 125 FCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT 184
P + D V + +T H ++ + GL + + + FSV F+
Sbjct: 190 -SMSPIVHIVD----VGSGSTESHA-NVTEIHDGL---DFSSDEDGGYSFGIFSVKFSTD 240
Query: 185 GTKIFAGYNK-SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY 243
G ++ AG + S+ V+D+ R T+ + ++ + F+ ++ GS
Sbjct: 241 GREVVAGSSDDSIYVYDLEA-NR--VSLRTVAHTSD-----VNTVCFADESGNLILSGSD 292
Query: 244 SQTSAIYRE----DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297
++ + VL G GVT + DG Y + G KD I WD+RK
Sbjct: 293 DNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNG-KDQTIKLWDIRK 349
Score = 80 (33.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 325 RHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHPFLPMAASSS 373
+++ TG D V+IYDL +G ++ + + V ++HP+ P SSS
Sbjct: 414 KYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSS 462
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 110 (43.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 44/140 (31%), Positives = 66/140 (47%)
Query: 162 CTYRAYDAVDEITAAFSVAFNPTGTKIFA--GYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219
C + A+D E+ A V F+P G+++ A G ++ V++++V G E +L G+
Sbjct: 316 CVFDAHDG--EVNA---VQFSP-GSRLLATGGMDRRVKLWEVF--GEKCEFKGSLSGSN- 366
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
AGI S I F + +LA S S I+ D+ L + L G G V +F D N
Sbjct: 367 --AGITS-IEFDSAGSYLLA-ASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLD-NA 421
Query: 280 LYTGGRKDPYILCWDLRKAV 299
G D + WDLR V
Sbjct: 422 RIVSGSHDRTLKLWDLRSKV 441
Score = 53 (23.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 18/69 (26%), Positives = 27/69 (39%)
Query: 284 GRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
G D I WD+R + R E + D+ P L + +D L+ + DL+T
Sbjct: 465 GHFDKKIRFWDIRSE-----SIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRT 519
Query: 344 GKWISGFQA 352
F A
Sbjct: 520 NAIKQTFSA 528
>UNIPROTKB|Q9BVC4 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9606 "Homo sapiens" [GO:0030838 "positive regulation of
actin filament polymerization" evidence=IEA] [GO:0032314
"regulation of Rac GTPase activity" evidence=IEA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032008
"positive regulation of TOR signaling cascade" evidence=IMP]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0005829 "cytosol" evidence=TAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0008286 "insulin receptor signaling pathway" evidence=TAS]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=TAS] [GO:0031295 "T cell costimulation" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Pathway_Interaction_DB:pi3kciaktpathway
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007173 GO:GO:0008543 GO:GO:0008286 GO:GO:0048011
Pathway_Interaction_DB:mtor_4pathway Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031295
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112
GO:GO:0050731 GO:GO:0030838 GO:GO:0048015 GO:GO:0032314
GO:GO:0032956 EMBL:AC009065 KO:K08266 GO:GO:0032008 CTD:64223
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 OMA:NNKGNCY EMBL:AY223837
EMBL:AK021536 EMBL:AK022227 EMBL:AK302201 EMBL:BC001313
EMBL:BC017119 EMBL:BC052292 EMBL:BC088354 EMBL:AF195883
IPI:IPI00007182 IPI:IPI00102926 IPI:IPI00420058
RefSeq:NP_001186102.1 RefSeq:NP_001186103.1 RefSeq:NP_001186104.1
RefSeq:NP_071767.3 UniGene:Hs.29203 ProteinModelPortal:Q9BVC4
SMR:Q9BVC4 IntAct:Q9BVC4 STRING:Q9BVC4 PhosphoSite:Q9BVC4
DMDM:74761285 PaxDb:Q9BVC4 PRIDE:Q9BVC4 DNASU:64223
Ensembl:ENST00000301724 Ensembl:ENST00000301725
Ensembl:ENST00000382450 Ensembl:ENST00000397124
Ensembl:ENST00000564088 Ensembl:ENST00000565250
Ensembl:ENST00000569417 GeneID:64223 KEGG:hsa:64223 UCSC:uc002coy.3
GeneCards:GC16P002254 H-InvDB:HIX0012725 HGNC:HGNC:24825
HPA:CAB019935 MIM:612190 neXtProt:NX_Q9BVC4 PharmGKB:PA165450213
GenomeRNAi:64223 NextBio:66155 Bgee:Q9BVC4 Genevestigator:Q9BVC4
Uniprot:Q9BVC4
Length = 326
Score = 115 (45.5 bits), Expect = 0.00064, P = 0.00064
Identities = 41/156 (26%), Positives = 67/156 (42%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
AGY+ +VR + H + Q ++A+ +P + M+A Y Q +
Sbjct: 18 AGYDHTVRFWQAHS--------GICTRTVQHQDSQVNALEVTPDRS-MIAAAGY-QHIRM 67
Query: 250 Y--REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
Y +N + G + V F DG ++YTGG +D WDLR ++++
Sbjct: 68 YDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGG-EDCTARIWDLRSRNLQCQRIFQ 126
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQT 343
+ N L P+ L G Q G +HI+DL+T
Sbjct: 127 VNAPINCVCL---HPNQAELIVGDQSGAIHIWDLKT 159
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 96 (38.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 44/185 (23%), Positives = 79/185 (42%)
Query: 104 AKDQDS-YEASLVVTEGES--VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL 160
A+D + A V+++G S + D W P AS + D + +WD +G
Sbjct: 42 AEDASQRWVAKTVLSDGHSRTIRDVAW-------SPCGQYLASASFDATVAIWDKKSGEF 94
Query: 161 RCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219
C +E+ SV+++ +G+ + +KSV V++V + ++E + L + +
Sbjct: 95 ECNATLEGHENEVK---SVSWSKSGSLLATCSRDKSVWVWEVAQED-EYECAAVLNTHTQ 150
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYVLHGQEGGVTHVQFSR 275
+ + + P H +LA SY T +Y+ED + L E V + F
Sbjct: 151 D----VKKVEWHP-HEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDG 205
Query: 276 DGNYL 280
GN L
Sbjct: 206 SGNRL 210
Score = 61 (26.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 65 GIKWSPDGSSFLTSSEDKTLRIFS 88
G W P G+ T EDKT+RI++
Sbjct: 19 GAGWHPKGNVLATCGEDKTIRIWA 42
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 118 (46.6 bits), Expect = 0.00065, P = 0.00065
Identities = 36/146 (24%), Positives = 61/146 (41%)
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
EG + ++ + + P+ L Y + ++ + E + G GV + F DG+
Sbjct: 319 EGHSMRVARVMWHPSGR-FLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGS 377
Query: 279 YLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
TGG D + WDLR +++ H + + P+G H+ TG D +
Sbjct: 378 LAGTGGL-DAFGRVWDLRTGRCIMFL----EGHLKEIYGLNFSPNGYHVATGSGDNTCKV 432
Query: 339 YDLQTGKWISGFQAAADTVNGFSFHP 364
+DL+ K I A + V G F P
Sbjct: 433 WDLRQRKCIYTIPAHQNLVTGVKFEP 458
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 81 (33.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYN 193
S P S + A+ + DH I W+A TG RC YR D + P + A N
Sbjct: 2 SQP-SVILATASYDHTIRFWEAETG--RC-YRTIQYPDSHVNRLEIT--PDKHYLAAACN 55
Query: 194 KSVRVFDVH 202
+R+FDV+
Sbjct: 56 PHIRLFDVN 64
Score = 76 (31.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 268 VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHL 327
V V F D ++Y+G +D + WDLR K Y S N +L P+ L
Sbjct: 81 VMAVGFQCDAKWMYSGS-EDGTVKIWDLR--APGCQKEYESVAAVNTVVL---HPNQTEL 134
Query: 328 GTGGQDGLVHIYDLQ 342
+G Q+G + ++DL+
Sbjct: 135 ISGDQNGNIRVWDLR 149
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 87 (35.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 28/120 (23%), Positives = 51/120 (42%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G +++ +FSP +A S+ + ++ + L L G V +S D
Sbjct: 387 GHQKVVNHASFSPDGR-CIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRL 445
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L + + D + WD+R ++ + L H +Q D P G+ + +GG D V I+
Sbjct: 446 LVSSSQ-DTTLKVWDVRSK-KMKFDL---PGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 75 (31.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 25/109 (22%), Positives = 43/109 (39%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE 120
N++ + W+PD S T S D T+R + P+ G S + +
Sbjct: 178 NWVSCVAWAPDASIIATGSMDNTIRFWD-PKKG---------------SPIGDALRRHTK 221
Query: 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA 169
+ CW P A D + AS ++D+ + +W+ L T + A
Sbjct: 222 PIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTA 270
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 52/166 (31%), Positives = 79/166 (47%)
Query: 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA--VDEITAAFSVAFNPTGTKIFAGYN 193
P+ + AS++ D I LWD +G R+ DA VD A+SVAF+P + G +
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGK---QIRSIDAGPVD----AWSVAFSPDSQHLATGSH 126
Query: 194 KS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252
V +F V G+ ++YS + G+ I+S IA+SP LA G+ I+
Sbjct: 127 VGKVNIFGVET-GK--KEYSL---DTRGKF-ILS-IAYSPDGK-YLASGAIDGIINIFDI 177
Query: 253 DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298
+LL+ L G + + FS D L T D YI +D++ A
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSTDSQLLVTAS-DDGYIKIYDVQHA 222
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 56/236 (23%), Positives = 92/236 (38%)
Query: 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188
P + S + +++T D + +WD T + A +V +T AFS P+ I
Sbjct: 25 PDIDISTDGKYLLSASTND-VLLVWDLHTSNKVAFFEA-PSVWIMTCAFS----PSTKSI 78
Query: 189 FAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247
AG N V+D P D + + G AG +S + G L GS +T
Sbjct: 79 AAGGLNNFCVVYDTSVP--DADPVELV-----GHAGFVSCCKY--VDDGHLLTGSGDKTC 129
Query: 248 AIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
+ + + + VL G E + + F L+ G D WDLR A Y
Sbjct: 130 MFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAA----YCCAT 185
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT-VNGFSF 362
+T+ PS TG +DG+ +D++ I + + + + +N F
Sbjct: 186 FPGNTSDINSISFFPSNADFVTGAEDGIARCFDIRASAEIFQYSSPSSSPINSVLF 241
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 84 (34.6 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G +++ + FSP T +A S+ ++ ++ + L L G G V V +S D
Sbjct: 358 GHMQLVNQVVFSPD-TRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRL 416
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L +G D + ++L K + Y L H ++ D P G + +GG+D ++ ++
Sbjct: 417 LVSGSA-DSTLKVFEL-KTKSLYYDL---PGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 60 (26.2 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 122 VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG-LLRC 162
+ W P DPT + AS +D I +WD G ++RC
Sbjct: 193 ITSLAWQP--MHKDPTCRLLASCGKDGNIFIWDTVQGTVVRC 232
Score = 55 (24.4 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 18/74 (24%), Positives = 37/74 (50%)
Query: 20 EVTEAAQENQQEYTWPL-IRFDVPPHRTYHFYNQFRTS-SIPNNFLKGI--KWSPDGSSF 75
E+ ++ +++ +E + ++ P + R S SIP + I ++SPDG
Sbjct: 61 EIVDSIRKSLEEIDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRGL 120
Query: 76 LTSSEDKTLRIFSL 89
+ S D+T+RI+ +
Sbjct: 121 ASGSGDQTMRIWDI 134
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 34/146 (23%), Positives = 62/146 (42%)
Query: 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278
EG ++ + + P+ L Y ++ ++ + E + G GV + F +DG+
Sbjct: 319 EGHTVRVARVTWHPSGR-FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 377
Query: 279 YLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHI 338
TGG D + WDLR +++ H + + P+G H+ TG D +
Sbjct: 378 LAGTGGL-DAFGRVWDLRTGRCIMFL----EGHLKEIYGINFSPNGYHIATGSGDNTCKV 432
Query: 339 YDLQTGKWISGFQAAADTVNGFSFHP 364
+DL+ + + A + V G F P
Sbjct: 433 WDLRQRRCVYTIPAHQNLVTGVKFEP 458
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 122 (48.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 188 IFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247
+F+ + + R + ++ TL EG ++ +AF P+ L SY +T
Sbjct: 305 VFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGK-YLGTTSYDKTW 363
Query: 248 AIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 307
++ + L + G V + F +DG + G D WDLR ++ +++
Sbjct: 364 RLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGL-DSLARVWDLRTGRSIL--VFQ 420
Query: 308 SSEHTNQRILFDIEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADTVNGFSFHP 364
H + P+G HL +GG+D I+DL+ K + A A+ V+ + P
Sbjct: 421 G--HIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEP 475
Score = 38 (18.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPE 91
L G +S DG T S +++ +P+
Sbjct: 258 LTGCSFSRDGKILATCSLSGVTKLWEMPQ 286
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 95 (38.5 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279
G +++ + FSP + ++A S+ ++ ++ + L L G V + +S D
Sbjct: 371 GHQALINQVVFSPD-SRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 429
Query: 280 LYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEPSGRHLGTGGQDGLVHIY 339
L +G D + WD+ KA ++ L H ++ D P G+ + +GG+D + I+
Sbjct: 430 LVSGS-SDSTLKVWDV-KAQKLSTDL---PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 59 (25.8 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT 186
W P + A+ P AS+++D + +WD T G RC +T + + G
Sbjct: 208 WEP-LHAN-PECRYVASSSKDGSVRVWDTTAG--RCERTLTGHAQSVTC---LRWGGDGL 260
Query: 187 KIFAGYNKSVRVFDVH 202
A +++++V+ H
Sbjct: 261 LYSASQDRTIKVWRAH 276
Score = 44 (20.5 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
+++ I WSPDG + ++ + ++ P G
Sbjct: 158 HWVLSISWSPDGKKLASGCKNGQILLWD-PSTG 189
>ZFIN|ZDB-GENE-040426-2012 [details] [associations]
symbol:wdr24 "WD repeat domain 24" species:7955
"Danio rerio" [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2012 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 EMBL:BC045501 IPI:IPI00491202 RefSeq:NP_998228.1
UniGene:Dr.79568 ProteinModelPortal:Q7ZVL2 GeneID:406336
KEGG:dre:406336 InParanoid:Q7ZVL2 NextBio:20817956
ArrayExpress:Q7ZVL2 Uniprot:Q7ZVL2
Length = 779
Score = 119 (46.9 bits), Expect = 0.00086, P = 0.00086
Identities = 37/157 (23%), Positives = 69/157 (43%)
Query: 190 AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249
A N +V +++ RP R+ ++ + + ++ + F PT ML GS
Sbjct: 87 AATNGAVVTWNLSRPCRNKQEQLFTEHKRT-----VNKVCFHPTEVNMLLSGSQDGFMKC 141
Query: 250 YREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSS 309
+ E + GQ V VQFS + + ++ + WD+R+ + +++ +
Sbjct: 142 FDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYE-RMFTA- 199
Query: 310 EHTNQRILFDIEPSGRH-LGTGGQDGLVHIYDLQTGK 345
HT D P R L TGG+D +V ++D+ T +
Sbjct: 200 -HTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMSTNR 235
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 38/141 (26%), Positives = 63/141 (44%)
Query: 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263
P +++ TL G +G + AIA GS T I+ +N L VL G
Sbjct: 70 PAAEWKLLRTLAGAHQGW---IRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTG 126
Query: 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE-HTNQRILFDIEP 322
G+ + S+ YL++GG +D + CWDL ++ RS H + P
Sbjct: 127 HVLGIRSLCISKRHPYLFSGG-EDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHP 185
Query: 323 SGRHLGTGGQDGLVHIYDLQT 343
L +GG+D +V ++D+++
Sbjct: 186 ELDVLFSGGKDCVVRVWDIRS 206
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 38/141 (26%), Positives = 63/141 (44%)
Query: 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263
P +++ TL G +G + AIA GS T I+ +N L VL G
Sbjct: 70 PAAEWKLLRTLAGAHQGW---IRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTG 126
Query: 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSE-HTNQRILFDIEP 322
G+ + S+ YL++GG +D + CWDL ++ RS H + P
Sbjct: 127 HVLGIRSLCISKRHPYLFSGG-EDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHP 185
Query: 323 SGRHLGTGGQDGLVHIYDLQT 343
L +GG+D +V ++D+++
Sbjct: 186 ELDVLFSGGKDCVVRVWDIRS 206
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 96 (38.9 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 32/137 (23%), Positives = 62/137 (45%)
Query: 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262
RP D + + G+ QA +++ + FSP T ++A S+ ++ ++ + L L
Sbjct: 370 RPAEDKKPLERMTGH---QA-LINQVLFSPD-TRIIASASFDKSIKLWEGRTGKYLTSLR 424
Query: 263 GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFDIEP 322
G V + +S D L +G D + WD + ++ L H ++ D P
Sbjct: 425 GHVSAVYQIAWSADSRLLVSGS-SDSTLKVWDA-ETKKLAIDL---PGHADEVFATDWSP 479
Query: 323 SGRHLGTGGQDGLVHIY 339
G+ + +GG+D + I+
Sbjct: 480 DGQRVASGGKDKCLRIW 496
Score = 57 (25.1 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 126 CWFP-HMSASDPTSCVFASTTRDHPIHLWDATTGLLRC 162
CW P H++ P AS ++D I +WD G RC
Sbjct: 219 CWEPLHIN---PECRYLASASKDGSIRIWDTLMG--RC 251
Score = 45 (20.9 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG 93
QF T+ +++ I WSPDG + ++ + ++ P G
Sbjct: 162 QF-TAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWD-PATG 201
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 51/225 (22%), Positives = 88/225 (39%)
Query: 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201
S+++D + +WD T T + + T + AF+P+ I G + V +
Sbjct: 85 SSSQDGKVIVWDGFT-----TNKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPL 139
Query: 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261
+K K MS F + ++ GS T AI+ ++ +L+
Sbjct: 140 SFEDDIIQK----KRQVATHTSYMSCCTFLRSDN-LILTGSGDSTCAIWDVESGQLIQNF 194
Query: 262 HGQEGGVTHVQFSR--DGNYLYTGGRKDPYILCWDLRKAVQVVYKLYRSSEHTNQRILFD 319
HG G V + + GN + G D + L WD+R Q V + E + F
Sbjct: 195 HGHTGDVFAIDVPKCDTGNTFISAGA-DKHSLVWDIRSG-QCVQS-FEGHEADINTVRF- 250
Query: 320 IEPSGRHLGTGGQDGLVHIYDLQTGKWISGFQAAADT--VNGFSF 362
P+G TG D ++DL+ + + ++ + VNG F
Sbjct: 251 -HPNGDAFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDF 294
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 64/256 (25%), Positives = 110/256 (42%)
Query: 69 SPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAK-DQDSYEASLVVTE---GE---S 121
S D + D ++RI+SL + +A SL + D++S + ++ + + GE S
Sbjct: 386 SDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRS 445
Query: 122 VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF 181
+ + A P + S + D I LW T TYR + + + V F
Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGH-----VYPVWDVRF 500
Query: 182 NPTGTK-IFAGYNKSVRVF--DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML 238
P G + Y+K+ R++ D ++ R F G + + F P ++ +
Sbjct: 501 APHGYYFVSCSYDKTARLWATDSNQALRVFV----------GHLSDVDCVQFHP-NSNYV 549
Query: 239 AIGSYSQTSAIYREDNM--ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296
A GS +T ++ DNM + + ++ G +G V+ + FS G YL +G D I+ WDL
Sbjct: 550 ATGSSDRTVRLW--DNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGS-VDHNIIIWDLS 606
Query: 297 KAVQVVYKLYRSSEHT 312
V L +S T
Sbjct: 607 NGSLVTTLLRHTSTVT 622
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 430 418 0.00082 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 237
No. of states in DFA: 623 (66 KB)
Total size of DFA: 296 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 35.19u 0.10s 35.29t Elapsed: 00:00:01
Total cpu time: 35.23u 0.11s 35.34t Elapsed: 00:00:02
Start: Tue May 21 05:53:45 2013 End: Tue May 21 05:53:47 2013
WARNINGS ISSUED: 1