Query 014128
Match_columns 430
No_of_seqs 193 out of 1026
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 02:07:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014128hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2209 Oxysterol-binding prot 100.0 2E-108 4E-113 787.1 16.5 362 38-408 39-441 (445)
2 PF01237 Oxysterol_BP: Oxyster 100.0 8E-104 2E-108 800.5 28.6 350 42-399 1-354 (354)
3 KOG1737 Oxysterol-binding prot 100.0 3E-102 6E-107 831.9 28.8 365 36-408 427-795 (799)
4 KOG2210 Oxysterol-binding prot 100.0 1.7E-68 3.7E-73 535.9 22.7 333 37-398 31-378 (392)
5 PF14254 DUF4348: Domain of un 50.8 19 0.00041 35.5 3.9 41 198-238 225-266 (273)
6 PF02084 Bindin: Bindin; Inte 39.8 35 0.00076 32.8 3.7 54 43-103 105-159 (238)
7 PF12915 DUF3833: Protein of u 28.6 1.6E+02 0.0035 27.0 6.0 61 233-299 22-89 (164)
8 KOG3205 Rho GDP-dissociation i 27.7 3E+02 0.0064 25.9 7.5 56 203-258 116-185 (200)
9 PF10504 DUF2452: Protein of u 27.5 1.2E+02 0.0025 27.7 4.8 86 52-139 14-109 (159)
10 PF06886 TPX2: Targeting prote 26.2 1.1E+02 0.0023 23.0 3.7 31 328-358 1-31 (57)
11 PF09783 Vac_ImportDeg: Vacuol 25.7 2E+02 0.0043 26.7 6.2 42 216-271 37-78 (176)
12 PF14038 YqzE: YqzE-like prote 24.2 37 0.00081 25.3 0.9 17 358-374 28-44 (54)
13 PF07576 BRAP2: BRCA1-associat 23.4 87 0.0019 26.7 3.1 23 115-137 75-97 (110)
14 PF14714 KH_dom-like: KH-domai 21.3 92 0.002 24.9 2.7 21 137-157 30-50 (80)
No 1
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-108 Score=787.05 Aligned_cols=362 Identities=36% Similarity=0.665 Sum_probs=329.5
Q ss_pred cccchHHHHHhhccCccccCCcccCcccccccchhHHhhccccchHhhhcccCCCCHHHHHHHHHHHHHhhhhh-ccccC
Q 014128 38 EERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAW 116 (430)
Q Consensus 38 ~~~~slw~~lk~~iGkDLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~d~~eRm~~V~af~iS~~~~-~~r~~ 116 (430)
-+.+|||++||++||+|| |+|+|||.||||+|||||++|+|+|..||.+||.+.||+|||.+|+|||+|+.++ -.|..
T Consensus 39 r~d~SIW~Ilr~ciGkel-SkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~~~~p~eRmqyVAAFAvsavas~weR~g 117 (445)
T KOG2209|consen 39 RNDFSIWSILRKCIGKEL-SKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSQSDPVERMQYVAAFAVSAVASQWERTG 117 (445)
T ss_pred cccccHHHHHHhhhchhh-hheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhHHHhc
Confidence 356899999999999999 5799999999999999999999999999999999999999999999999999976 57999
Q ss_pred CCCCCCCCCeEEEEecC-CeEEEEeecccCCCeeEEEEE--CCCeEEEEEeceeeeEEeeEEEEEEeeEEEEEEecCCeE
Q 014128 117 KPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVV 193 (430)
Q Consensus 117 KPfNPiLGETfe~~~~~-g~~~iaEQVSHHPPIsA~~~e--~~~~~~~~~~~~~~kF~G~sv~v~~~G~~~i~~~~~ge~ 193 (430)
||||||||||||+.+.+ |+|||||||||||||||||+| +..|.|.|++.|+.||||+||++.|.|+++|+|+++||.
T Consensus 118 KPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksvea~Pkgtitle~~k~nEa 197 (445)
T KOG2209|consen 118 KPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLKHNEA 197 (445)
T ss_pred CCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceeecCCCceEEEEecccCcc
Confidence 99999999999998854 999999999999999999999 788999999999999999999999999999999999999
Q ss_pred EEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEecCccccCcceEEEEEEECCCCCceEEEeeeecceeeee
Q 014128 194 LDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQ 273 (430)
Q Consensus 194 Y~~~~P~~~v~nii~G~~~~e~~G~~~I~~~~tg~~a~i~F~~~~~fg~~~~~v~G~V~d~~g~~~~~i~G~W~~~l~~~ 273 (430)
|+|+.|+++|||||+|++|||++|+|.|.||.||++|+++|+++|+||+..|+|+|+|.|++.++++.|.|+|++.|+..
T Consensus 198 YtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG~i~d~~k~kl~~lYGkWTe~l~~c 277 (445)
T KOG2209|consen 198 YTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEGHIQDKSKKKLCALYGKWTECLYSC 277 (445)
T ss_pred eeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheeehhhccccccchhhhccHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988753
Q ss_pred eCCC---------------------------CCCCCCCCc-------eeEEEeeccCCCC--CccccceeeeecCCCCCC
Q 014128 274 PCDS---------------------------EGEPLPGTE-------LKEVWRVADAPED--DKYQYTYFTHKLNSFDTA 317 (430)
Q Consensus 274 ~~~~---------------------------~g~~~~~~~-------~~~lW~~~~~p~~--~~y~ft~fa~~LNe~~~~ 317 (430)
+..+ +..|+++++ .+.||.+++.|++ ++|+||.||++||++++.
T Consensus 278 d~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~P~~ds~~v~~iPgSk~LW~~n~rP~n~~~~y~FT~FalsLNem~~~ 357 (445)
T KOG2209|consen 278 DPESFDAFKKQDKRNTEERKNSKQMSTSEELDDMPVPDSESVFIIPGSKLLWRINPRPPNSAQMYNFTSFALSLNEMDKG 357 (445)
T ss_pred CHHHHHHHHHhhhhcchhhhhhccCCchhhccCCCCCCcceeEecCCCeEEEEecCCCCCHHHhhchhhheeehhhhccC
Confidence 2110 001222211 2469999999998 699999999999999984
Q ss_pred -CCcCCCCCCccchhHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEeccch
Q 014128 318 -PKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKY 396 (430)
Q Consensus 318 -~~~~~ptDSR~RpD~rale~Gd~d~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~w~y~g~Y 396 (430)
...++|||||+|||+|+||+|++|.|.++|+||||+||+.|+.|.+....|+||||.+..++. .+...|.|.|+|
T Consensus 358 M~~tl~pTD~RlRpDi~~mE~G~~D~AseeK~rlEEkQRe~Rk~rs~~~~dw~~rWF~~~~np~----t~~~dWlYsGgY 433 (445)
T KOG2209|consen 358 MESTLPPTDCRLRPDIRAMENGNIDQASEEKKRLEEKQREARKNRSKSEEDWKTRWFHQGPNPY----TGAQDWLYSGGY 433 (445)
T ss_pred cccccCCcccccCchhhhhhcCCcchhHHHHHHHHHHHHHHHhhcccccccCcchhcccCCCCC----CCcccceeecCc
Confidence 347789999999999999999999999999999999999999998889999999999998864 334679999999
Q ss_pred hhhcccCCCCCC
Q 014128 397 SELRATLDNSES 408 (430)
Q Consensus 397 w~~r~~~~~~~~ 408 (430)
|++ +++.|
T Consensus 434 wdR----~ysn~ 441 (445)
T KOG2209|consen 434 WDR----NYSNC 441 (445)
T ss_pred ccc----ccccC
Confidence 976 45544
No 2
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=8.4e-104 Score=800.52 Aligned_cols=350 Identities=41% Similarity=0.741 Sum_probs=271.0
Q ss_pred hHHHHHhhccCccccCCcccCcccccccchhHHhhccccchHhhhcccCCCCHHHHHHHHHHHHHhhhhh-ccccCCCCC
Q 014128 42 NYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAWKPFN 120 (430)
Q Consensus 42 slw~~lk~~iGkDLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~d~~eRm~~V~af~iS~~~~-~~r~~KPfN 120 (430)
|||++||+++|+||++ |||||+||||+|+|||+|++|+|++||++||.++||++||++|++|++|+|+. ..|.+||||
T Consensus 1 s~w~~lK~~~G~dLs~-islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~~~d~~eR~~~V~~f~~S~~~~~~~~~~KPfN 79 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSR-ISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAEEDDPLERMLYVAAFALSSYSSTPGRTKKPFN 79 (354)
T ss_dssp HHHHHHHHT--S-GGG-S---GGGEEEEEGGGGGGGGSSSHHHHHGGGGS-HHHHHHHHHHHHHHHHHHHHHHHHHEEE-
T ss_pred CHHHHhhhcCCCChhc-CccCceecCCCcHHHhhhhhhhChHHHhccCCCCCHHHHHHHHHHHHHhhhhhhcCCCCcCcC
Confidence 7999999999999975 99999999999999999999999999999999999999999999999999987 577889999
Q ss_pred CCCCCeEEEEecCCeEEEEeecccCCCeeEEEEECCCeEEEEEeceeeeEEeeEEEEEEeeEEEEEEecCCeEEEEeCCC
Q 014128 121 PVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPP 200 (430)
Q Consensus 121 PiLGETfe~~~~~g~~~iaEQVSHHPPIsA~~~e~~~~~~~~~~~~~~kF~G~sv~v~~~G~~~i~~~~~ge~Y~~~~P~ 200 (430)
||||||||+.+++|++|+||||||||||||||++|++|.++|+..++++|+|+||++.+.|.++|+|.++||+|+|++|+
T Consensus 80 PiLGETfe~~~~~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~~p~ 159 (354)
T PF01237_consen 80 PILGETFELVRPDGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWTKPT 159 (354)
T ss_dssp --TT-EE--TT-T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE--S
T ss_pred CCCcceeeeccCceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEecCc
Confidence 99999999986689999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred ceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEecCccccCcceEEEEEEECCCCCceEEEeeeecceeeeeeCCCCCC
Q 014128 201 TKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGE 280 (430)
Q Consensus 201 ~~v~nii~G~~~~e~~G~~~I~~~~tg~~a~i~F~~~~~fg~~~~~v~G~V~d~~g~~~~~i~G~W~~~l~~~~~~~~g~ 280 (430)
++|+||++|++|+|+.|+|+|+|++||++|+|+|+++||||+..+.|+|+|++.+|++++.|.|+|++.|.+......+
T Consensus 160 ~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~~~v~G~I~~~~~~~~~~i~G~W~~~i~~~~~~~~~- 238 (354)
T PF01237_consen 160 TYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKSNEVEGKIYDSKGKPIYKISGKWDEEIYIKDVKNDS- 238 (354)
T ss_dssp EEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSSTTEEEEEEESSGGG-SEEEEEETTSEEEEEETT----
T ss_pred EEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccceeeEEEEEEccCceeEEeeeeeCCeEEEEeccccc-
Confidence 9999999999999999999999999999999999999999999999999999988999999999999999998765321
Q ss_pred CCCCCceeEEEeeccCCCC--CccccceeeeecCCCCCCCC-cCCCCCCccchhHHHHHcCChhHHHHHHHHHHHHHHHH
Q 014128 281 PLPGTELKEVWRVADAPED--DKYQYTYFTHKLNSFDTAPK-KLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAE 357 (430)
Q Consensus 281 ~~~~~~~~~lW~~~~~p~~--~~y~ft~fa~~LNe~~~~~~-~~~ptDSR~RpD~rale~Gd~d~A~~eK~~LEe~QR~~ 357 (430)
...+...+|++++.|.+ .+|+||.||++||++++..+ .++|||||+|||++||++||+++|+++|.+|||+||++
T Consensus 239 --~~~~~~~lw~~~~~~~~~~~~~~ft~fa~~LNe~~~~~~~~~~ptDSr~R~d~~al~~gd~~~A~~eK~~lEe~QR~~ 316 (354)
T PF01237_consen 239 --DTGESKLLWDANPLPPNPKKYYGFTQFAIPLNELTPELEEKLPPTDSRWRPDQRALENGDIDKAQEEKKRLEEKQRAD 316 (354)
T ss_dssp ---GGGEEEEEETTTS-SS--B----------G-------G-GS-TTBHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHH
T ss_pred --cCCCceEEEECCCCcccccceecccccccccccccccccccCCchhccchHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 12345689999998875 58999999999999988553 78999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceecceeecCCCCCCCCCCcceEEeccchhhh
Q 014128 358 KRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSEL 399 (430)
Q Consensus 358 rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~w~y~g~Yw~~ 399 (430)
||+|++++++|+||||+++.|+. .+.+.|+|+|+||++
T Consensus 317 rk~R~~~~~~w~Pr~F~~~~d~~----~~~~~w~~~g~YW~~ 354 (354)
T PF01237_consen 317 RKERKEKGEEWKPRWFEKVEDPS----TEEEEWVYKGGYWER 354 (354)
T ss_dssp HHHHHHCT--GGGSSEEEEE-SS----S--T-----------
T ss_pred HHHHHHcCCCccCCeEEECCCCC----CccccccccccccCC
Confidence 99999999999999999997764 345689999999985
No 3
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-102 Score=831.86 Aligned_cols=365 Identities=44% Similarity=0.731 Sum_probs=347.4
Q ss_pred cccccchHHHHHhhccCccccCCcccCcccccccchhHHhhccccchHhhhcccCCCCHHHHHHHHHHHHHhhhh-hccc
Q 014128 36 KQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYF-AYRR 114 (430)
Q Consensus 36 ~~~~~~slw~~lk~~iGkDLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~d~~eRm~~V~af~iS~~~-~~~r 114 (430)
+++.+.+||++||++|||||+ +|+|||.||||+|+|||++|+|||++||++|++..||++||++|+||++|+|+ +..|
T Consensus 427 ~~~~~islw~~~k~~iGkDls-kv~~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~~d~~~R~~~vaafavS~Ya~t~~r 505 (799)
T KOG1737|consen 427 KPSSSISLWSILRNNIGKDLS-KVSMPVEFNEPLSLLQRVAEDLEYSELLDKAANYEDPLERMVYVAAFAVSSYSSTSRR 505 (799)
T ss_pred CcCCCccHHHHHhhccccccc-ccccceecCCcchHHHHhhhhccchhhhHHHHhcCCcHHHHHHHHHHHhhhcchhccc
Confidence 466789999999999999997 69999999999999999999999999999999999999999999999999995 4678
Q ss_pred cCCCCCCCCCCeEEEEe-cCCeEEEEeecccCCCeeEEEEECCCeEEEEEeceeeeEEeeEEEEEEeeEEEEEEecCCeE
Q 014128 115 AWKPFNPVLGETFEMVN-HGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVV 193 (430)
Q Consensus 115 ~~KPfNPiLGETfe~~~-~~g~~~iaEQVSHHPPIsA~~~e~~~~~~~~~~~~~~kF~G~sv~v~~~G~~~i~~~~~ge~ 193 (430)
..|||||||||||||.+ ++|+|||+|||||||||+|+||++++|.||+++.+++||||+||+|.|.|.++|+|+++|++
T Consensus 506 ~~KPFNPlLgETyE~~r~dkg~rf~sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~ 585 (799)
T KOG1737|consen 506 TAKPFNPLLGETYEMDRPDKGLRFFSEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEH 585 (799)
T ss_pred ccCCCCcccccceEeeccCCceeeeeeeeccCCCcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCcc
Confidence 99999999999999998 45999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceeeeeeccceeEecCCcEEEEeCCCC-CEEEEEEecCccccCcceEEEEEEECCCCCceEEEeeeecceeee
Q 014128 194 LDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTG-DKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSY 272 (430)
Q Consensus 194 Y~~~~P~~~v~nii~G~~~~e~~G~~~I~~~~tg-~~a~i~F~~~~~fg~~~~~v~G~V~d~~g~~~~~i~G~W~~~l~~ 272 (430)
|+|.+|+++|+|||+|++|+|++|.|.|++++++ ++|.|.|++.|||+++.++|.|.|+|.+|++++++.|+|++.|++
T Consensus 586 ~~w~kvtt~v~nii~Gk~~~D~~ge~~i~n~~~~~~~c~L~F~~~~~~~~~~~ev~g~V~~~s~~~~~~l~GkW~e~~~~ 665 (799)
T KOG1737|consen 586 YSWAKVTTTVHNIILGKLWVDHYGEMEITNHTTGSDKCKLKFVKAGYFSRNAREVEGSVRNKSGKKVEVLTGKWDESLYY 665 (799)
T ss_pred ccccCccceecceeeccccccccccEEEecCCCCcceeEEEEeeecccCCCcceeEEEEeCCCCceeEEEeeeehhhhhh
Confidence 9999999999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCCCCCCceeEEEeeccCCCCCccccceeeeecCCCCCCCC-cCCCCCCccchhHHHHHcCChhHHHHHHHHHH
Q 014128 273 QPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPK-KLLPSDSRLRPDRYALEKGDLSKAGSEKSRLE 351 (430)
Q Consensus 273 ~~~~~~g~~~~~~~~~~lW~~~~~p~~~~y~ft~fa~~LNe~~~~~~-~~~ptDSR~RpD~rale~Gd~d~A~~eK~~LE 351 (430)
..++..|.+.+......+|++++.|++.+|+||.||++||++++.+. .++|||||+|||||+||+|++++|..||.|||
T Consensus 666 ~~~~~~~~~~~~~~~~~iWk~~~~Pkn~~y~ft~fai~LNel~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK~rlE 745 (799)
T KOG1737|consen 666 FKVDKVGLPEPETSEKLIWKANDLPKNNKYNFTGFAIELNELTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEKLRLE 745 (799)
T ss_pred ccccccccccCCccceeeeecCCCCCCcccccchhheecccCCchhhccCCCCCcccCcchhhhhccChhhhhhhhHhHH
Confidence 88887776666777788999999999999999999999999999665 55689999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEeccchhhhcccCCCCCC
Q 014128 352 ERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSES 408 (430)
Q Consensus 352 e~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~w~y~g~Yw~~r~~~~~~~~ 408 (430)
|+||++|+.|++.+.+|+||||.+.+++.+ .|+|+|+||++|++++|..|
T Consensus 746 e~QR~~r~~re~~~~~~~prwF~~~~~~~~-------~~~~ng~Ywe~r~~~d~~~~ 795 (799)
T KOG1737|consen 746 EKQRARRRKREENGEEYEPRWFEKVKDPST-------YWVYNGGYWEAREKQDWKDC 795 (799)
T ss_pred HHHHHHHHHHHhhccccccccccccCCCcc-------eEEecCchheeecccCcccc
Confidence 999999999999999999999999987531 89999999999999999866
No 4
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-68 Score=535.87 Aligned_cols=333 Identities=27% Similarity=0.393 Sum_probs=282.5
Q ss_pred ccccchHHHHHhh-ccCccccCCcccCcccccccchhHHhhccccchHhhhcccCCCCHHHHHHHHHHHHHhhhhhccc-
Q 014128 37 QEERDNYWKMMQK-YIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR- 114 (430)
Q Consensus 37 ~~~~~slw~~lk~-~iGkDLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~d~~eRm~~V~af~iS~~~~~~r- 114 (430)
++.+.-+|.++++ .+|+||+ +|+||+|++||+|+||++++.+.++|||..|+..+||++||+.|++|++|+++...+
T Consensus 31 e~~~s~i~~L~sq~rpg~DLs-~v~LPtfile~rs~Le~~~~~~~~~dll~~~~~~~~p~~R~~~VvkwylS~~~~~~~~ 109 (392)
T KOG2210|consen 31 EEGKSIILDLLSQLRPGMDLS-RVVLPTFILEPRSLLEKYTDFSYHPDLLLEASSEADPLERMLAVVKWYLSGFHAGPKG 109 (392)
T ss_pred hhccceeecHhhhccCCCCcc-cccchhhhhhhHHHHHHhhhhhhccchhcccccCCCHHHHhhhheeeeehhccccccc
Confidence 4555667888876 6999997 599999999999999999999999999999999999999999999999999997554
Q ss_pred cCCCCCCCCCCeEEEEec-------CCeEEEEeecccCCCeeEEEEECC--CeEEEEEeceeeeEEeeEEEEEEeeEEEE
Q 014128 115 AWKPFNPVLGETFEMVNH-------GGVTFIAEQVSHHPPMSAGHAENE--HFIYDVTSKLRTKFLGNSIDVYPVGRTRV 185 (430)
Q Consensus 115 ~~KPfNPiLGETfe~~~~-------~g~~~iaEQVSHHPPIsA~~~e~~--~~~~~~~~~~~~kF~G~sv~v~~~G~~~i 185 (430)
.+|||||||||||.|.+. ..+.|+||||||||||||||++++ ++.+.|+..++++|.|+|+.|.+.|..+|
T Consensus 110 ~~~PyNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~l 189 (392)
T KOG2210|consen 110 RKKPYNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGVL 189 (392)
T ss_pred ccCCCCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcEE
Confidence 456999999999999872 568999999999999999999886 48889999999999999999999999999
Q ss_pred EEecCCeEEEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEecCccccCcceEEEEEEECCC-CCceEEEee
Q 014128 186 TLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAA-EQPKILMTG 264 (430)
Q Consensus 186 ~~~~~ge~Y~~~~P~~~v~nii~G~~~~e~~G~~~I~~~~tg~~a~i~F~~~~~fg~~~~~v~G~V~d~~-g~~~~~i~G 264 (430)
+|.+++|+|.+++|.++++|+++|.+|+|+.|.+.|.|++|++.+.+.|..++|+|+..+.+.+.|+... ....+.|+|
T Consensus 190 ~ll~~~E~Y~~t~P~~~~rg~~~~~p~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~~ik~~~~~~~~~~i~G 269 (392)
T KOG2210|consen 190 KLLDHDETYLITFPNAYARGILLGAPWVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNARSIKGPIDKKDFCSISG 269 (392)
T ss_pred EEEecCcceeeccCCceeeeeeeccceEecCceEEEEcCCcceeeeEeeccCcccccccccceEEEEcccccccccccce
Confidence 9999999999999999999999999999999999999999999999999999999999999999998654 345677999
Q ss_pred eecceeeeeeCCCCCCCCCCCceeEEEeeccCCCCCccccceeeeecCCCCCCC-CcCCCCCCcc--chhHHHHHcCChh
Q 014128 265 KWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAP-KKLLPSDSRL--RPDRYALEKGDLS 341 (430)
Q Consensus 265 ~W~~~l~~~~~~~~g~~~~~~~~~~lW~~~~~p~~~~y~ft~fa~~LNe~~~~~-~~~~ptDSR~--RpD~rale~Gd~d 341 (430)
+||+.++++..+.+. ...+-+....|.-. ....| +.+-|.+||+ +.+++||..||++
T Consensus 270 ~W~~~~~~k~~~~~~-------~~~~~d~~~~~~~~-------------~~v~pLeEQ~e~ESrrlWk~Vt~ai~~~d~~ 329 (392)
T KOG2210|consen 270 EWDGVMYAKYAKSGE-------SRNFVDCKKLPVTK-------------PKVRPLEEQGEYESRRLWKEVTEAILAGDIE 329 (392)
T ss_pred eecccEEEEEcCCCc-------eeecccccccCcCC-------------CCcCChHHcCcHHHHHHHHHHHHHHHhccHH
Confidence 999999998654321 00111111111100 00011 2445788997 5689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEeccchhh
Q 014128 342 KAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSE 398 (430)
Q Consensus 342 ~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~w~y~g~Yw~ 398 (430)
.|+++|..|||+||++||+|++.|++|+||||+..++. ..|.|..--+.
T Consensus 330 ~Ate~K~~iEe~QR~~ak~ree~g~~W~pk~F~~~~~~--------~~~~~~~~~~~ 378 (392)
T KOG2210|consen 330 QATEEKFELEEKQRELAKKREESGEEWKPKLFKVDEDG--------GDWDYRNYLPK 378 (392)
T ss_pred HHhHHHhHHHHHHHHHHHHHHHhCCcceecceeEcCCC--------CCccccccccC
Confidence 99999999999999999999999999999999998763 24666654443
No 5
>PF14254 DUF4348: Domain of unknown function (DUF4348); PDB: 3SBU_A.
Probab=50.79 E-value=19 Score=35.49 Aligned_cols=41 Identities=27% Similarity=0.565 Sum_probs=25.9
Q ss_pred CCCceeeeeeccceeEecCCcE-EEEeCCCCCEEEEEEecCc
Q 014128 198 PPPTKVHNLIFGRTWIDSPGDM-VMTNLTTGDKVVLYFQPCG 238 (430)
Q Consensus 198 ~P~~~v~nii~G~~~~e~~G~~-~I~~~~tg~~a~i~F~~~~ 238 (430)
+|.-.|.||++|++|.+--.++ .|+.-.+|+..+|.|+..|
T Consensus 225 lP~~~i~NI~YGQky~~s~~KIl~~rGi~NG~e~~l~Fk~~~ 266 (273)
T PF14254_consen 225 LPKGKIYNINYGQKYTESNQKILVFRGIANGLETELYFKKRG 266 (273)
T ss_dssp --SSEEEEEESS----T-SEEEEEEEESSS--EEEEEEEEET
T ss_pred CCccceeeeecccccCCCCceEEEEEeecCceeEEEEEEEcC
Confidence 5888999999999999954444 5667889999999998653
No 6
>PF02084 Bindin: Bindin; InterPro: IPR000775 Bindin, the major protein component of the acrosome granule of sea urchin sperm, mediates species-specific adhesion of sperm to the egg surface during fertilisation [, ]. The protein coats the acrosomal process after externalisation by the acrosome reaction; it binds to sulphated, fucose-containing polysaccharides on the vitelline-layer receptor proteoglycans that cover the egg plasma membrane. Bindins from different genera show high levels of sequence similarity in both the mature bindin domain and in the probindin precursor region. The most highly conserved region is a 42-residue segment in the central portion of the mature bindin protein. This domain may be responsible for conserved functions of bindin, while the more highly divergent flanking regions may be responsible for its species-specific properties [].; GO: 0007342 fusion of sperm to egg plasma membrane
Probab=39.80 E-value=35 Score=32.76 Aligned_cols=54 Identities=26% Similarity=0.363 Sum_probs=36.2
Q ss_pred HHHHHhhccCccccCCcccCcccccccchhHHhhcccc-chHhhhcccCCCCHHHHHHHHHH
Q 014128 43 YWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELME-YSHLLDLADECEDPYMRLVYASS 103 (430)
Q Consensus 43 lw~~lk~~iGkDLts~islPv~~~EP~S~Lqr~ae~~e-y~~lL~~Aa~~~d~~eRm~~V~a 103 (430)
|..-||..+|. | +|-|||-||.|..+ =.|-..|. |++||- .+-||.-|=.-+.|
T Consensus 105 vm~~ikavLga--T-KiDLPVDINDPYDl-GLLLRhLRHHSNLLA---nIgdP~VreqVLsA 159 (238)
T PF02084_consen 105 VMEDIKAVLGA--T-KIDLPVDINDPYDL-GLLLRHLRHHSNLLA---NIGDPEVREQVLSA 159 (238)
T ss_pred HHHHHHHHhcc--c-ccccccccCChhhH-HHHHHHHHHHHHHHh---hcCCHHHHHHHHHH
Confidence 55666777884 5 59999999999874 23334444 567774 57788777554433
No 7
>PF12915 DUF3833: Protein of unknown function (DUF3833); InterPro: IPR024409 This is a family of uncharacterised proteins found in Proteobacteria.
Probab=28.56 E-value=1.6e+02 Score=26.99 Aligned_cols=61 Identities=18% Similarity=0.376 Sum_probs=37.5
Q ss_pred EEecCccccCcceEEEEEEECCCCCce----EEEeeeecceeeeeeCC---CCCCCCCCCceeEEEeeccCCCC
Q 014128 233 YFQPCGWFGAGRYEVDGYVYDAAEQPK----ILMTGKWNESMSYQPCD---SEGEPLPGTELKEVWRVADAPED 299 (430)
Q Consensus 233 ~F~~~~~fg~~~~~v~G~V~d~~g~~~----~~i~G~W~~~l~~~~~~---~~g~~~~~~~~~~lW~~~~~p~~ 299 (430)
.|....||.+. -.-.|.|.|..|++. ..|.|+|++..-.-..+ .+|+ ...++|++.+..++
T Consensus 22 ~~~l~~fF~G~-~~A~G~~~dr~G~v~rrF~v~i~g~w~g~~~tL~E~F~y~DGe-----~q~R~W~l~~~~~g 89 (164)
T PF12915_consen 22 KFDLEEFFNGK-LVAWGMFQDRSGKVTRRFTVDIDGSWDGNTGTLDEDFVYDDGE-----TQTRVWTLTKTGDG 89 (164)
T ss_pred ccCHHHHCCCc-EEEEEEEECCCCCEEEEEEEEEEEEEECCEEEEEEEEEECCCC-----EEEEEEEEEECCCC
Confidence 34555567644 346799999999854 45899999753221100 1232 34578998876653
No 8
>KOG3205 consensus Rho GDP-dissociation inhibitor [Signal transduction mechanisms]
Probab=27.72 E-value=3e+02 Score=25.92 Aligned_cols=56 Identities=14% Similarity=0.199 Sum_probs=34.2
Q ss_pred eeeeeccceeEecCCcEEEEeCCCC-------CEEEEEE-------ecCccccCcceEEEEEEECCCCCc
Q 014128 203 VHNLIFGRTWIDSPGDMVMTNLTTG-------DKVVLYF-------QPCGWFGAGRYEVDGYVYDAAEQP 258 (430)
Q Consensus 203 v~nii~G~~~~e~~G~~~I~~~~tg-------~~a~i~F-------~~~~~fg~~~~~v~G~V~d~~g~~ 258 (430)
-|+|+.|=+|+.+.-..=|+-.++. -.++... .|+|+|.++.+.+.+...|.+++.
T Consensus 116 q~eIvSGLrY~q~v~r~Gv~VDk~~~MlGSy~P~~e~ye~~~p~eeAPsGmlaRG~Ys~~skF~DDDk~~ 185 (200)
T KOG3205|consen 116 QREIVSGLRYVQTVYRTGVKVDKTKYMLGSYGPQAEPYEFVTPEEEAPSGMLARGSYSAKSKFTDDDKTC 185 (200)
T ss_pred eeheeccceeeeEEeecceEEeehhhhcccCCCCCcceeeeCCcccCCccceeecceeeeeEEecCCCce
Confidence 3577788888776543333322221 1233322 267899988899999988865553
No 9
>PF10504 DUF2452: Protein of unknown function (DUF2452); InterPro: IPR019534 This entry contains proteins that have no known function.
Probab=27.53 E-value=1.2e+02 Score=27.74 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=47.6
Q ss_pred CccccCCcccCcccccccchhHHhhccccchHhhhcccCCC---CHHHHHHHHHHHHHhhhh------hccccCCCCCCC
Q 014128 52 GADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECE---DPYMRLVYASSWALSIYF------AYRRAWKPFNPV 122 (430)
Q Consensus 52 GkDLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~---d~~eRm~~V~af~iS~~~------~~~r~~KPfNPi 122 (430)
|..|.| +.||.-..|-.-|=-+|...+-++-.-+|..+. --.++|..+..=|-.... .....+==|.|+
T Consensus 14 g~~~~~--~~~~~~~~~~~dlv~la~~iq~Ad~~~~~~t~~kL~~I~eQi~~Lq~QA~~ile~~~~~~~l~~A~cnF~pi 91 (159)
T PF10504_consen 14 GVQLVS--PYRVSRLGDPFDLVDLAQQIQKADSAMRANTCNKLEVIAEQIRFLQEQARKILEEAERNEELHHAKCNFEPI 91 (159)
T ss_pred CccccC--cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCceec
Confidence 566654 677877755555556666656555444443221 112333332222222111 112355678999
Q ss_pred CCCeEEEEe-cCCeEEEE
Q 014128 123 LGETFEMVN-HGGVTFIA 139 (430)
Q Consensus 123 LGETfe~~~-~~g~~~ia 139 (430)
.|+||.+.. ++|..|++
T Consensus 92 pG~iYhLY~r~~G~~ylS 109 (159)
T PF10504_consen 92 PGQIYHLYRRENGQDYLS 109 (159)
T ss_pred CCCEEEEEECCCCCEEEE
Confidence 999999865 67877775
No 10
>PF06886 TPX2: Targeting protein for Xklp2 (TPX2); InterPro: IPR009675 This family represents a conserved region approximately 60 residues long within the eukaryotic targeting protein for Xklp2 (TPX2). Xklp2 is a kinesin-like protein localised on centrosomes throughout the cell cycle and on spindle pole microtubules during metaphase. In Xenopus, it has been shown that Xklp2 protein is required for centrosome separation and maintenance of spindle bi-polarity []. TPX2 is a microtubule-associated protein that mediates the binding of the C-terminal domain of Xklp2 to microtubules. It is phosphorylated during mitosis in a microtubule-dependent way [].
Probab=26.19 E-value=1.1e+02 Score=23.02 Aligned_cols=31 Identities=29% Similarity=0.431 Sum_probs=24.3
Q ss_pred cchhHHHHHcCChhHHHHHHHHHHHHHHHHH
Q 014128 328 LRPDRYALEKGDLSKAGSEKSRLEERQRAEK 358 (430)
Q Consensus 328 ~RpD~rale~Gd~d~A~~eK~~LEe~QR~~r 358 (430)
|+-|.||.+-..++..-.+|....+.++..+
T Consensus 1 l~t~~RA~~R~eF~~kl~EK~~~~e~~~~~~ 31 (57)
T PF06886_consen 1 LHTDERAEERKEFDKKLEEKEKAKEAEKEER 31 (57)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457889999999999999988777766443
No 11
>PF09783 Vac_ImportDeg: Vacuolar import and degradation protein; InterPro: IPR018618 Members of this family are involved in the negative regulation of gluconeogenesis. They are required for both proteosome-dependent and vacuolar catabolite degradation of fructose-1,6-bisphosphatase (FBPase), where they probably regulate FBPase targeting from the FBPase-containing vesicles to the vacuole [, ].
Probab=25.75 E-value=2e+02 Score=26.71 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=27.6
Q ss_pred CCcEEEEeCCCCCEEEEEEecCccccCcceEEEEEEECCCCCceEEEeeeecceee
Q 014128 216 PGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMS 271 (430)
Q Consensus 216 ~G~~~I~~~~tg~~a~i~F~~~~~fg~~~~~v~G~V~d~~g~~~~~i~G~W~~~l~ 271 (430)
+|.|+|.+.+.......+| ++|+|.+ ....-.++++|...-.
T Consensus 37 ~G~l~i~glt~~~p~itTf------------FeGEII~--~~~~~F~T~~W~a~~~ 78 (176)
T PF09783_consen 37 CGYLEIKGLTDDHPEITTF------------FEGEIIG--FNKHSFLTEKWGANEE 78 (176)
T ss_pred EEEEEEecCCCCCCcEEEE------------EeeEEec--CCCCceeccccCCCcc
Confidence 5778888876665555565 5899986 2333456778876553
No 12
>PF14038 YqzE: YqzE-like protein
Probab=24.20 E-value=37 Score=25.32 Aligned_cols=17 Identities=29% Similarity=0.749 Sum_probs=12.6
Q ss_pred HHHHHhcCCCceeccee
Q 014128 358 KRIREAKDDMFTPKWFD 374 (430)
Q Consensus 358 rk~R~~~~~~w~Pr~F~ 374 (430)
|.+|++..++|.-+||-
T Consensus 28 k~~rK~~k~p~~~rWFG 44 (54)
T PF14038_consen 28 KEERKEEKEPFSYRWFG 44 (54)
T ss_pred HHHHHhcCCcHHHHHHh
Confidence 44456677899999994
No 13
>PF07576 BRAP2: BRCA1-associated protein 2; InterPro: IPR011422 These proteins include BRCA1-associated protein 2 (BRAP2), which binds nuclear localisation signals (NLSs) in vitro and in yeast two-hybrid screening []. These proteins share a region of sequence similarity at their N terminus. They also have IPR001607 from INTERPRO at the C terminus.
Probab=23.40 E-value=87 Score=26.73 Aligned_cols=23 Identities=39% Similarity=0.440 Sum_probs=17.4
Q ss_pred cCCCCCCCCCCeEEEEecCCeEE
Q 014128 115 AWKPFNPVLGETFEMVNHGGVTF 137 (430)
Q Consensus 115 ~~KPfNPiLGETfe~~~~~g~~~ 137 (430)
..||||+|--||++++.-..+.+
T Consensus 75 NGk~FnslEpE~ChvvfV~~Ve~ 97 (110)
T PF07576_consen 75 NGKPFNSLEPETCHVVFVKSVEF 97 (110)
T ss_pred CCCccCCCCCceeEEEEEEEEEE
Confidence 56999999999998875434433
No 14
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=21.28 E-value=92 Score=24.89 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=16.8
Q ss_pred EEEeecccCCCeeEEEEECCC
Q 014128 137 FIAEQVSHHPPMSAGHAENEH 157 (430)
Q Consensus 137 ~iaEQVSHHPPIsA~~~e~~~ 157 (430)
+++-||+..||.-+++|-+++
T Consensus 30 ~Y~tQv~~~PPtFv~f~N~~~ 50 (80)
T PF14714_consen 30 YYATQVGTRPPTFVLFVNDPE 50 (80)
T ss_dssp EEEEEEETTTTEEEEEES-CC
T ss_pred EEEEeCCCCCCEEEEEeCCcc
Confidence 567799999999999986643
Done!