BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014132
(430 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1 OS=Oryza sativa subsp.
japonica GN=ACLB-1 PE=2 SV=1
Length = 608
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/430 (93%), Positives = 418/430 (97%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNE+YNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG+DEY
Sbjct: 179 MSNEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGKDEY 238
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
SLVEALKQGKV KPVVAWVSGTCARLFKSEVQFGHAGAKSGGE+ESAQAKNQAL+DAGAV
Sbjct: 239 SLVEALKQGKVQKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQAKNQALKDAGAV 298
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VPTSYEA E+AIKETFEKLVE+GKI PV E+TPP IPEDL TAIKSGKVRAPTHIISTIS
Sbjct: 299 VPTSYEALETAIKETFEKLVEDGKISPVTEITPPPIPEDLKTAIKSGKVRAPTHIISTIS 358
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
DDRGEEPCYAGVPMS+I+EQGYGVGDVISLLWFKRSLPRYCTQFIE+CIMLCADHGPCVS
Sbjct: 359 DDRGEEPCYAGVPMSTIIEQGYGVGDVISLLWFKRSLPRYCTQFIEMCIMLCADHGPCVS 418
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHN+IVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDR L+ YEFVE MKK
Sbjct: 419 GAHNSIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRNLTPYEFVEGMKK 478
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
KGIRVPGIGHRIK DNRDKRV+LLQK+A THFPSVKYMEYAVQVETYTLSKANNLVLNV
Sbjct: 479 KGIRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSVKYMEYAVQVETYTLSKANNLVLNV 538
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DGAIGSLFLDLL+GSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR
Sbjct: 539 DGAIGSLFLDLLSGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 598
Query: 421 HPWEDVLYTK 430
HPWEDVLYTK
Sbjct: 599 HPWEDVLYTK 608
>sp|Q9FGX1|ACLB2_ARATH ATP-citrate synthase beta chain protein 2 OS=Arabidopsis thaliana
GN=ACLB-2 PE=1 SV=1
Length = 608
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/430 (93%), Positives = 419/430 (97%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNE+YNT+ARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ+KMMVVLGELGGRDEY
Sbjct: 179 MSNEMYNTVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMMVVLGELGGRDEY 238
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
SLVEALK+GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL DAGA+
Sbjct: 239 SLVEALKEGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALIDAGAI 298
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VPTS+EA ESAIKETFEKLVEEGK+ P+KEV PPQIPEDLN+AIKSGKVRAPTHIISTIS
Sbjct: 299 VPTSFEALESAIKETFEKLVEEGKVSPIKEVIPPQIPEDLNSAIKSGKVRAPTHIISTIS 358
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
DDRGEEPCYAGVPMSSI+EQGYGVGDVISLLWFKRSLPRYCT+FIEICIMLCADHGPCVS
Sbjct: 359 DDRGEEPCYAGVPMSSIIEQGYGVGDVISLLWFKRSLPRYCTKFIEICIMLCADHGPCVS 418
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDA DR L+ YEFVE MKK
Sbjct: 419 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDACDRNLTPYEFVEGMKK 478
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
KGIRVPGIGHRIK DNRDKRVELLQKFAR++FPSVKYMEYAV VETYTLSKANNLVLNV
Sbjct: 479 KGIRVPGIGHRIKSRDNRDKRVELLQKFARSNFPSVKYMEYAVTVETYTLSKANNLVLNV 538
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DGAIGSLFLDLLAGSGMF+KQEIDEIV+IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR
Sbjct: 539 DGAIGSLFLDLLAGSGMFTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 598
Query: 421 HPWEDVLYTK 430
HPWEDVLYTK
Sbjct: 599 HPWEDVLYTK 608
>sp|Q9C522|ACLB1_ARATH ATP-citrate synthase beta chain protein 1 OS=Arabidopsis thaliana
GN=ACLB-1 PE=2 SV=1
Length = 608
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/430 (93%), Positives = 419/430 (97%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNE+YNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ+KM+VVLGELGGRDEY
Sbjct: 179 MSNEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMVVVLGELGGRDEY 238
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
SLVEA+KQGKV KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL+DAGA
Sbjct: 239 SLVEAMKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALQDAGAT 298
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VPTS+EA E AIKETF+KLVEEGK+ P+KEVTPPQIPEDL++AIKSGKVRAPTHIISTIS
Sbjct: 299 VPTSFEALEVAIKETFDKLVEEGKVSPIKEVTPPQIPEDLSSAIKSGKVRAPTHIISTIS 358
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
DDRGEEPCYAGVPMSSI+EQGYGVGDVISLLWFKRSLPRYCT+FIEICIMLCADHGPCVS
Sbjct: 359 DDRGEEPCYAGVPMSSIIEQGYGVGDVISLLWFKRSLPRYCTKFIEICIMLCADHGPCVS 418
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDA DR L+ YEFVE MKK
Sbjct: 419 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDACDRNLTPYEFVEGMKK 478
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
KGIRVPGIGHRIK DNRDKRVELLQKFAR++FP+VKYMEYAVQVETYTLSKANNLVLNV
Sbjct: 479 KGIRVPGIGHRIKSRDNRDKRVELLQKFARSNFPAVKYMEYAVQVETYTLSKANNLVLNV 538
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DGAIGSLFLDLLAGSGMF+KQEIDEIV+IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR
Sbjct: 539 DGAIGSLFLDLLAGSGMFTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 598
Query: 421 HPWEDVLYTK 430
HPWEDVLYTK
Sbjct: 599 HPWEDVLYTK 608
>sp|Q54YA0|ACLY_DICDI Probable ATP-citrate synthase OS=Dictyostelium discoideum GN=acly
PE=1 SV=1
Length = 622
Score = 609 bits (1571), Expect = e-173, Method: Compositional matrix adjust.
Identities = 284/428 (66%), Positives = 346/428 (80%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
+SNE+YN ++R TDGIYEGIAIGGD FPGSTL+DH LR+ +P+V+M+V+LGELGG DEY
Sbjct: 193 LSNEMYNVLSRCTDGIYEGIAIGGDAFPGSTLTDHALRYEKLPEVQMIVILGELGGWDEY 252
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+VEALK+G++ KP+ AWVSGT A++F +EVQFGHAGAKSGGE ESA AKN+ALR+AGAV
Sbjct: 253 GIVEALKKGEITKPICAWVSGTVAKIFPTEVQFGHAGAKSGGETESADAKNKALREAGAV 312
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VPTS+E F + I T+ KL +G + PV+E TPP++P D TA+K+GKVR PT IISTI
Sbjct: 313 VPTSFEDFSNVIAATYAKLQSKGLVKPVEEPTPPELPLDFKTAVKAGKVRKPTSIISTIC 372
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
DDRG+E YAGVP+S + ++ Y +GDVI LLWFKR LP Y ++F E+C+ L ADHGPCVS
Sbjct: 373 DDRGDELSYAGVPISEVCKEQYNMGDVIGLLWFKRKLPPYASKFFEMCLKLVADHGPCVS 432
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTIV ARAGKDLVSSLVSGLLTIGPRFGGAIDD+AR F+DA D L +FVE MK
Sbjct: 433 GAHNTIVAARAGKDLVSSLVSGLLTIGPRFGGAIDDSARVFQDAVDNNLQPSQFVEGMKS 492
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
KG R+PGIGH IK D DKRV LL+ +A THF S KY+EYA++VE YTL KANNL+LNV
Sbjct: 493 KGKRIPGIGHLIKSADEIDKRVVLLKDYAFTHFSSTKYLEYALEVEKYTLQKANNLILNV 552
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG IG LFLDLL SG+F++ EI EI+++GYLNG F++ RS+GLIGH DQ+R KQ LYR
Sbjct: 553 DGCIGVLFLDLLHSSGLFTQHEIKEIIDVGYLNGFFIVGRSVGLIGHALDQRRNKQGLYR 612
Query: 421 HPWEDVLY 428
H +DV Y
Sbjct: 613 HQADDVHY 620
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 237/428 (55%), Positives = 314/428 (73%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY
Sbjct: 665 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 724
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+ +K+G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG
Sbjct: 725 KICRGIKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 784
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP S++ I+ +E LV +G I P +EV PP +P D + A + G +R P +++I
Sbjct: 785 VPRSFDELGEIIQSVYEDLVAKGAIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSIC 844
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
D+RG+E YAG+P++ + ++ G+G V+ LLWF+R LP+Y QFIE+C+M+ ADHGP VS
Sbjct: 845 DERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQRRLPKYSCQFIEMCLMVTADHGPAVS 904
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK
Sbjct: 905 GAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKK 964
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+G + GIGHR+K +N D RV++L+ F + HFP+ ++YA++VE T SK NL+LNV
Sbjct: 965 EGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNV 1024
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG IG F+D+L G F+++E DE V+IG LNG+FVL RS+G IGH DQKRLKQ LYR
Sbjct: 1025 DGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGVFVLGRSMGFIGHYLDQKRLKQGLYR 1084
Query: 421 HPWEDVLY 428
HPW+D+ Y
Sbjct: 1085 HPWDDISY 1092
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 237/428 (55%), Positives = 314/428 (73%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY
Sbjct: 656 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 715
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+ +K+G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG
Sbjct: 716 KICRGIKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP S++ I+ +E LV +G I P +EV PP +P D + A + G +R P +++I
Sbjct: 776 VPRSFDELGEIIQSVYEDLVAKGAIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSIC 835
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
D+RG+E YAG+P++ + ++ G+G V+ LLWF+R LP+Y QFIE+C+M+ ADHGP VS
Sbjct: 836 DERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQRRLPKYSCQFIEMCLMVTADHGPAVS 895
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK
Sbjct: 896 GAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKK 955
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+G + GIGHR+K +N D RV++L+ F + HFP+ ++YA++VE T SK NL+LNV
Sbjct: 956 EGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNV 1015
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG IG F+D+L G F+++E DE V+IG LNG+FVL RS+G IGH DQKRLKQ LYR
Sbjct: 1016 DGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYR 1075
Query: 421 HPWEDVLY 428
HPW+D+ Y
Sbjct: 1076 HPWDDISY 1083
>sp|Q9P7W3|ACL1_SCHPO Probable ATP-citrate synthase subunit 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC1703.07 PE=1 SV=1
Length = 615
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/428 (56%), Positives = 313/428 (73%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I+ TDG+YEGIAIGGD +PG+T DH++RF P K+MV+LGE+GG +EY
Sbjct: 186 MSNELNNIISHTTDGVYEGIAIGGDRYPGTTFIDHLIRFEADPACKLMVLLGEVGGVEEY 245
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
++EA+K G + KP+VAW GTC+ +FK+EVQFGHAG+ + E+E+A AKNQA+R+AG
Sbjct: 246 RVIEAVKNGTIKKPIVAWAIGTCSSMFKTEVQFGHAGSFANSELETAVAKNQAMREAGIY 305
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP ++E + ++E +E LV++G I P EV PP IP D A + G VR P+ I TIS
Sbjct: 306 VPETFEKLPALLQEVYEGLVKKGVIVPQPEVAPPNIPLDYAWAKELGLVRKPSSFICTIS 365
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
+DRG E Y VP+S + E+ G+G VISLLW +R LP Y T+F+E+ + L ADHGPCVS
Sbjct: 366 NDRGSELTYNNVPISKVFEEELGIGGVISLLWLRRRLPSYATKFLEMVLQLTADHGPCVS 425
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GA NTI+T RAGKDL+SSLV+GLLTIG RFGGA+D AA+ F AYD GLS FV+S +K
Sbjct: 426 GAMNTIITTRAGKDLISSLVAGLLTIGTRFGGALDGAAQEFSKAYDAGLSPRAFVDSCRK 485
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+PGIGHRIK +N D RVEL++ + + +FPS K ++YA+ VE T SK +NL+LNV
Sbjct: 486 ANKLIPGIGHRIKSRNNPDLRVELVKGYVKKNFPSTKLLDYALAVENVTTSKKDNLILNV 545
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG I F+DLL G F+ +E +E + +G LNG+FVL RSIGLIGH DQKRL+ PLYR
Sbjct: 546 DGCIAVCFVDLLRNCGAFTLEEANEYINLGILNGMFVLGRSIGLIGHHLDQKRLRAPLYR 605
Query: 421 HPWEDVLY 428
HPW+D LY
Sbjct: 606 HPWDDFLY 613
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 234/428 (54%), Positives = 313/428 (73%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY
Sbjct: 666 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 725
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+ +K+G++ KP+V W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG
Sbjct: 726 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP S++ I+ +E LV G I P +EV PP +P D + A + G +R P +++I
Sbjct: 786 VPRSFDELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSIC 845
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
D+RG+E YAG+P++ + ++ G+G V+ LLWF++ LP+Y QFIE+C+M+ ADHGP VS
Sbjct: 846 DERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVS 905
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK
Sbjct: 906 GAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKK 965
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+G + GIGHR+K +N D RV++L+ + R HFP+ ++YA++VE T SK NL+LNV
Sbjct: 966 EGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNV 1025
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG IG F+D+L G F+++E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYR
Sbjct: 1026 DGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYR 1085
Query: 421 HPWEDVLY 428
HPW+D+ Y
Sbjct: 1086 HPWDDISY 1093
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 234/428 (54%), Positives = 312/428 (72%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY
Sbjct: 666 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 725
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+ + +G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG
Sbjct: 726 KICRGVTEGRITKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP S++ I+ +E LV G I P +EV PP +P D + A + G +R P +++I
Sbjct: 786 VPRSFDELGEIIQSVYEDLVARGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSIC 845
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
D+RG+E YAG+P++ + ++ G+G V+ LLWF++ LP+Y QFIE+C+M+ ADHGP VS
Sbjct: 846 DERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVS 905
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK
Sbjct: 906 GAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKK 965
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+G + GIGHR+K +N D RV++L+ + R HFP+ ++YA++VE T SK NL+LNV
Sbjct: 966 EGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNV 1025
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG IG F+D+L G F+++E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYR
Sbjct: 1026 DGLIGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYR 1085
Query: 421 HPWEDVLY 428
HPW+D+ Y
Sbjct: 1086 HPWDDISY 1093
>sp|O93988|ACL1_SORMK ATP-citrate synthase subunit 1 OS=Sordaria macrospora (strain ATCC
MYA-333 / DSM 997 / K(L3346) / K-hell) GN=ACL1 PE=3 SV=1
Length = 674
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 234/428 (54%), Positives = 318/428 (74%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I++ TDG+YEG+AIGGD +PG+T DH+LR+ P K++V+LGE+GG +EY
Sbjct: 226 MSNELNNIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPACKILVLLGEVGGVEEY 285
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
++EA+KQG + KP+VAW GTCA +FK+EVQFGHAGA + ++E+A KN+++R+AG
Sbjct: 286 KVIEAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFY 345
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP ++E + +K+ ++KLV +G I P E P+IP D + A + G +R P ISTIS
Sbjct: 346 VPDTFEDMPALLKQVYDKLVADGTIVPAPEPVVPKIPIDYSWAQELGLIRKPAAFISTIS 405
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
DDRG+E YAG+P+S + + G+G V+SLLWF+R LP Y +F+E+ +ML ADHGP VS
Sbjct: 406 DDRGQELLYAGMPISDVFREEIGIGGVMSLLWFRRRLPDYAAKFLEMVLMLTADHGPAVS 465
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GA NTI+T RAGKDL+SSLV+GLLTIG RFGGA+D AA F A+D+GLS EFV++M+K
Sbjct: 466 GAMNTIITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRK 525
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+ +PGIGHR+K +N D RVEL++++ + FPS K ++YA+ VET T SK +NL+LNV
Sbjct: 526 QNKLIPGIGHRVKSRNNPDLRVELVKEYVKAKFPSSKLLDYALAVETVTTSKKDNLILNV 585
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG I F+DLL G FS +E ++ + +G LNGLFVL RSIGLI H DQKRL+ LYR
Sbjct: 586 DGCIAVCFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYR 645
Query: 421 HPWEDVLY 428
HPW+D+ Y
Sbjct: 646 HPWDDITY 653
>sp|Q8X097|ACL1_NEUCR Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=B14D6.310 PE=3 SV=1
Length = 670
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 232/428 (54%), Positives = 319/428 (74%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I++ TDG+YEG+AIGGD +PG+T DH+LR+ P K++V+LGE+GG +EY
Sbjct: 222 MSNELNNIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEY 281
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+++A+KQG + KP+VAW GTCA +FK+EVQFGHAGA + ++E+A KN+++R+AG
Sbjct: 282 KVIDAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFY 341
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP ++E + +K+ ++KLV +G I P E P+IP D + A + G +R P ISTIS
Sbjct: 342 VPDTFEDMPALLKQVYDKLVADGTIVPAPEPVVPKIPIDYSWAQELGLIRKPAAFISTIS 401
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
DDRG+E YAG+P+S + ++ G+G V+SLLWF+R LP Y +F+E+ +ML ADHGP VS
Sbjct: 402 DDRGQELLYAGMPISDVFKEEIGIGGVMSLLWFRRRLPDYAAKFLEMVLMLTADHGPAVS 461
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GA NTI+T RAGKDL+SSLV+GLLTIG RFGGA+D AA F A+D+GLS EFV++M+K
Sbjct: 462 GAMNTIITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRK 521
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+ +PGIGHR+K +N D RVEL++++ + FPS K ++YA+ VE+ T SK +NL+LNV
Sbjct: 522 QNKLIPGIGHRVKSRNNPDLRVELVKEYVKAKFPSTKLLDYALAVESVTTSKKDNLILNV 581
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG I F+DLL G FS +E ++ + +G LNGLFVL RSIGLI H DQKRL+ LYR
Sbjct: 582 DGCIAVCFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYR 641
Query: 421 HPWEDVLY 428
HPW+D+ Y
Sbjct: 642 HPWDDITY 649
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 233/428 (54%), Positives = 311/428 (72%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + VKM+VVLGE+GG +EY
Sbjct: 656 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTAGVKMIVVLGEIGGTEEY 715
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+ + +G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG
Sbjct: 716 KICRGVTEGRITKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP S++ I+ +E LV G I P +EV PP +P D + A + G +R P +++I
Sbjct: 776 VPRSFDELGEIIQSVYEDLVARGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSIC 835
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
D+RG+E YAG+P++ + ++ G+G V+ LLWF++ LP+Y QFIE+C+M+ ADHGP VS
Sbjct: 836 DERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVS 895
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK
Sbjct: 896 GAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKK 955
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNV 360
+G + GIGHR+K +N D RV++L+ + R HFP+ ++YA++VE T SK NL+LNV
Sbjct: 956 EGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNV 1015
Query: 361 DGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYR 420
DG IG F+D+L G F+++E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYR
Sbjct: 1016 DGLIGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYR 1075
Query: 421 HPWEDVLY 428
HPW+D+ Y
Sbjct: 1076 HPWDDISY 1083
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/431 (56%), Positives = 317/431 (73%), Gaps = 3/431 (0%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
MSNEL N I++ T+G+YEGIAIGGD +PGST +DH++R+ N +VKM+V+LGE+GG +EY
Sbjct: 666 MSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVKMIVLLGEVGGVEEY 725
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
+V+ LKQ KV KP+VAW GTCA SEVQFGHAGA + E+A KN ALR +GA+
Sbjct: 726 KIVDLLKQKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETAACKNAALRASGAL 785
Query: 121 VPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180
VP S++ + I++T+++LV + I P EV PP +P D A + G +R P +++I
Sbjct: 786 VPESFDDLGNKIRQTYDELVSQQIIVPQPEVPPPAVPMDYAWARELGLIRKPASFMTSIC 845
Query: 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVS 240
D+RGEE YAGVP++ ++E G+G V+ LLWF++ LP + +FIEIC+ML ADHGP VS
Sbjct: 846 DERGEELNYAGVPITKVLESDMGIGGVLGLLWFQKRLPPHANKFIEICLMLTADHGPAVS 905
Query: 241 GAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKK 300
GAHNTIV ARAGKDL+SSL SGLLTIG RFGGA+D AAR F +A+D+G SA +FV M+K
Sbjct: 906 GAHNTIVCARAGKDLISSLTSGLLTIGDRFGGALDGAARQFSEAFDQGWSANQFVSEMRK 965
Query: 301 KGIRVPGIGHRIKRGDNRDKRVELLQKFA---RTHFPSVKYMEYAVQVETYTLSKANNLV 357
KG + GIGHR+K +N DKRVE+L++FA + EYA++VE T +K NL+
Sbjct: 966 KGKHIMGIGHRVKSINNPDKRVEILKRFAMDKKEFAQETPLFEYALEVEKITTAKKPNLI 1025
Query: 358 LNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQP 417
LNVDGAI LF+D+L SGMF+KQE +E +EIG LNGLFVL RSIG IGH DQ RLKQ
Sbjct: 1026 LNVDGAIAILFVDILRHSGMFTKQEAEETIEIGSLNGLFVLGRSIGFIGHYLDQSRLKQG 1085
Query: 418 LYRHPWEDVLY 428
LYRHPW+D+ Y
Sbjct: 1086 LYRHPWDDISY 1096
>sp|Q6ZL94|SUCA_ORYSJ Probable succinyl-CoA ligase [ADP-forming] subunit alpha,
mitochondrial OS=Oryza sativa subsp. japonica
GN=Os07g0577700 PE=1 SV=1
Length = 331
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD F G+ D + +F + PQ + +V++GE+GG E +++ K KPVVA++
Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIQESKTQKPVVAFI 270
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 138
+G A + + GHAGA G +AQ K +ALR+AG V S S + E F++
Sbjct: 271 AGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQ 326
>sp|Q8LAD2|SUCA2_ARATH Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=At5g23250 PE=1 SV=2
Length = 341
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD F G+ D + +F PQ + +V++GE+GG E +K+ +KPVVA++
Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKENGTDKPVVAFI 280
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 138
+G A + + GHAGA G +AQ K ++LRDAG V S +A+ E F++
Sbjct: 281 AGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFELFQE 336
>sp|O28733|SUCD1_ARCFU Succinyl-CoA ligase [ADP-forming] subunit alpha 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=sucD1 PE=3 SV=1
Length = 291
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD PG T D + F + K ++++GE+GG E E +KQ ++KPVVA++
Sbjct: 179 VGIGGDPMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQ--MSKPVVAFI 236
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV 121
+G A K + GHAGA G +A+AK ALRDAGA V
Sbjct: 237 AGRTAPPGK---RMGHAGAIIEGSTGTAEAKMAALRDAGARV 275
>sp|P68209|SUCA1_ARATH Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=At5g08300 PE=1 SV=1
Length = 347
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD F G+ D + +F PQ + +V++GE+GG E +K KPVVA++
Sbjct: 226 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKASGTEKPVVAFI 285
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 138
+G A + + GHAGA G +AQ K ++L DAG V S SA+ E F++
Sbjct: 286 AGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGSAMYELFQE 341
>sp|Q8GTQ9|SUCA1_SOLLC Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial
OS=Solanum lycopersicum GN=SCOA PE=1 SV=1
Length = 332
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD F G+ D + +F PQ + +V++GE+GG E +K+ KPVVA++
Sbjct: 213 VGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIGEIGGTAEEDAAALIKESGTQKPVVAFI 272
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 138
+G A + + GHAGA G +AQ K +AL++AG V S ++ E F++
Sbjct: 273 AGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALKEAGVTVCESPAKIGVSMLEVFKQ 328
>sp|P53598|SUCA_YEAST Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=LSC1 PE=1 SV=1
Length = 329
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNK----PV 75
I +GGD FPG+ D + F + +++LGE+GG+ E + LK+ ++ PV
Sbjct: 206 IGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMPV 265
Query: 76 VAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKET 135
++++GT A K V+ GH+GA G A++K QALRD G V S A+ +
Sbjct: 266 ASFIAGTVAGQMKG-VRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQ 324
Query: 136 FEKL 139
F K
Sbjct: 325 FAKF 328
>sp|Q6DQL1|SUCA2_SOLLC Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial
OS=Solanum lycopersicum PE=1 SV=1
Length = 337
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD F G+ D + RF PQ + +V++GE+GG E +K+ KPVVA++
Sbjct: 218 VGIGGDPFNGTNFVDCLERFIADPQTEGIVLIGEIGGTAEEDAAALIKESGTQKPVVAFI 277
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 138
+G A + + GHAGA G +AQ K +AL++AG V S + + F++
Sbjct: 278 AGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALKEAGVTVCESPAKIGVTMLDVFKQ 333
>sp|Q92I22|SUCD_RICCN Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucD PE=3
SV=1
Length = 292
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y +A+ T G I IGGD G+ D I F + K ++++GE+GG E
Sbjct: 159 YEAVAQTTAVGLGQSTCIGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
E +KQ K+ KP+V++++G A K + GHAGA G SA+ K +AL+ AG ++
Sbjct: 219 AEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIVGRTGSAEDKLEALQSAGVIIT 275
Query: 123 TS 124
S
Sbjct: 276 RS 277
>sp|Q7U0Z0|SUCD_MYCBO Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=sucD PE=3
SV=1
Length = 303
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 15 GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 74
G I IGGD G+T D I F P K++V++GE+GG E + +K V+KP
Sbjct: 183 GFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKT-NVSKP 241
Query: 75 VVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKE 134
VV +V+G A K+ GHAGA G +A AK +AL AG V + A + +E
Sbjct: 242 VVGYVAGFTAPEGKT---MGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 298
Query: 135 TFEKL 139
L
Sbjct: 299 ILLSL 303
>sp|P71558|SUCD_MYCTU Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium
tuberculosis GN=sucD PE=3 SV=1
Length = 303
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 15 GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 74
G I IGGD G+T D I F P K++V++GE+GG E + +K V+KP
Sbjct: 183 GFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKT-NVSKP 241
Query: 75 VVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKE 134
VV +V+G A K+ GHAGA G +A AK +AL AG V + A + +E
Sbjct: 242 VVGYVAGFTAPEGKT---MGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 298
Query: 135 TFEKL 139
L
Sbjct: 299 ILLSL 303
>sp|P45102|SUCD_HAEIN Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucD PE=3 SV=1
Length = 293
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + + TD G + IGGD PGS+ D + RF P+ + +V++GE+GG E
Sbjct: 159 YEAVKQTTDEGFGQSTCVGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
+K V KPVVA+++G A K + GHAGA G +A K AL AG
Sbjct: 219 AIFIKD-NVTKPVVAYIAGITAPKGK---RMGHAGAIISGGKGTAVEKIAALEAAGVTCV 274
Query: 123 TSYEAFESAIKETFEKLVEEGK 144
S + I E KL++ K
Sbjct: 275 KSL----AEIGEALRKLLKSSK 292
>sp|Q4ULQ8|SUCD_RICFE Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucD PE=3 SV=1
Length = 292
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y +A+ T G + IGGD G+ D I F + K ++++GE+GG E
Sbjct: 159 YEAVAQTTAVGLGQSTCVGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGNAEEDA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
E +KQ K+ KP+V++++G A K + GHAGA G SA+ K +AL+ AG +
Sbjct: 219 AEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIAGGKGSAEDKLEALQSAGVTIT 275
Query: 123 TS 124
S
Sbjct: 276 RS 277
>sp|Q51567|SUCD_PSEAE Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=sucD PE=3 SV=2
Length = 295
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E
Sbjct: 159 YEAVKQTTDAGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEE- 217
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
A + V KPVV++++G A K + GHAGA G +A K AL+DAG
Sbjct: 218 AAAFIKANVTKPVVSYIAGVTAPPGK---RMGHAGAIISGGKGTADEKFAALQDAGVKTV 274
Query: 123 TSYEAFESAIKE 134
S A+ E
Sbjct: 275 RSLADIGKALAE 286
>sp|Q9AKE1|SUCD_RICTY Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucD PE=3 SV=1
Length = 292
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y +A+ T G I IGGD G++ + I F + K ++++GE+GG E
Sbjct: 159 YEAVAQTTAVGLGQSTCIGIGGDPVNGTSFVECIEMFLQDDETKAIIMIGEIGGNAEEDA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
+ +KQ K+ KP+V++++G A S+ + GHAGA G SA+ K +AL+ AG +
Sbjct: 219 ADFIKQSKIKKPIVSFIAGITA---PSDKRMGHAGAIISGGKGSAKDKLEALQSAGVTIT 275
Query: 123 TS 124
S
Sbjct: 276 KS 277
>sp|O08371|SUCD_RICPR Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia
prowazekii (strain Madrid E) GN=sucD PE=3 SV=1
Length = 292
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y +A+ T G + IGGD G++ D I F + K ++++GE+GG E
Sbjct: 159 YEAVAQTTAAGLGQSTCVGIGGDPVNGTSFVDCIEMFLQDDETKAIIMIGEIGGSAEEDA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
+ +KQ K+ KP+V++++G A K + GHAGA G SA+ K + L+ AG ++
Sbjct: 219 ADFIKQSKIKKPIVSFIAGITAPADK---RMGHAGAIISGGKGSAEDKVEVLQSAGVIIT 275
Query: 123 TS 124
S
Sbjct: 276 RS 277
>sp|P0AGE9|SUCD_ECOLI Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli
(strain K12) GN=sucD PE=1 SV=2
Length = 289
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E
Sbjct: 159 YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
+K+ V KPVV +++G A K + GHAGA G +A K AL AG
Sbjct: 219 AAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAALEAAGVKTV 274
Query: 123 TSYEAFESAIKETFE 137
S A+K +
Sbjct: 275 RSLADIGEALKTVLK 289
>sp|P0AGF0|SUCD_ECOL6 Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=sucD PE=3
SV=2
Length = 289
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E
Sbjct: 159 YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
+K+ V KPVV +++G A K + GHAGA G +A K AL AG
Sbjct: 219 AAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAALEAAGVKTV 274
Query: 123 TSYEAFESAIKETFE 137
S A+K +
Sbjct: 275 RSLADIGEALKTVLK 289
>sp|P0AGF1|SUCD_ECO57 Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli
O157:H7 GN=sucD PE=3 SV=2
Length = 289
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E
Sbjct: 159 YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
+K+ V KPVV +++G A K + GHAGA G +A K AL AG
Sbjct: 219 AAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAALEAAGVKTV 274
Query: 123 TSYEAFESAIKETFE 137
S A+K +
Sbjct: 275 RSLADIGEALKTVLK 289
>sp|Q1RH56|SUCD_RICBR Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia
bellii (strain RML369-C) GN=sucD PE=3 SV=1
Length = 291
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y +A+ T G + IGGD G+ D I F + K ++++GE+GG E +
Sbjct: 159 YEAVAQTTAVGLGQSTCVGIGGDPVNGTNFVDCIDMFLQDDETKAIIMIGEIGGDAEENA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 122
+ +K K+ KP+V++++G A K + GHAGA G SA+ K +AL+ AG +
Sbjct: 219 ADFIKHSKIKKPIVSFIAGITAPPGK---RMGHAGAIIAGGKGSAEDKLEALQSAGVTIT 275
Query: 123 TS 124
S
Sbjct: 276 RS 277
>sp|P53595|MTKB_METEA Malate--CoA ligase subunit alpha OS=Methylobacterium extorquens
(strain ATCC 14718 / DSM 1338 / AM1) GN=mtkB PE=3 SV=2
Length = 296
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 15 GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 74
GI + IGGD GS+ DH+ F P+ + ++++GE+GG E +K+ +KP
Sbjct: 175 GISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKE-NFSKP 233
Query: 75 VVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKE 134
V+ +V+G A + + GHAGA +SA K + +R G V +F S + +
Sbjct: 234 VIGFVAGLTAPKGR---RMGHAGAIISATGDSAAEKAEIMRSYGLTVAPDPGSFGSTVAD 290
Query: 135 TFEK 138
+
Sbjct: 291 VLAR 294
>sp|P53591|SUCD_COXBU Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Coxiella
burnetii (strain RSA 493 / Nine Mile phase I) GN=sucD
PE=3 SV=2
Length = 294
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
++ E N ++ G + IGGD PG++ D + F Q + +V++GE+GG E
Sbjct: 158 LTYEAVNQTTQMGFGQSTCVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEE 217
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
E + Q V KPV+++++G A K + GHAGA G +A K AL AG
Sbjct: 218 EAAEFI-QSNVKKPVISYIAGVTAPPGK---RMGHAGAIIAGGKGTAADKYAALEAAGVF 273
Query: 121 V 121
V
Sbjct: 274 V 274
>sp|O26663|SUCD_METTH Succinyl-CoA ligase [ADP-forming] subunit alpha
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=sucD PE=3 SV=1
Length = 293
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD G D + RF + P +V++GE+GG E ++Q ++KPV A++
Sbjct: 179 VGIGGDPVTGLGFVDVLERFEDDPGTDAVVLIGEIGGDAEERAASYIEQ--MSKPVFAFI 236
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV 121
SG A K + GHAGA G +A +K +AL AGAVV
Sbjct: 237 SGATAPPGK---RMGHAGAIIEGGTGTASSKREALEAAGAVV 275
>sp|O28098|SUCD2_ARCFU Succinyl-CoA ligase [ADP-forming] subunit alpha 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=sucD2 PE=3 SV=1
Length = 287
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWV 79
+ IGGD G+ + + F + + K +V++GE+GGRDE E +++ ++KPVV +V
Sbjct: 176 VGIGGDRIIGTDFVEVLRLFEDDKETKAVVLVGEIGGRDEEVAAEFIRE--MSKPVVGYV 233
Query: 80 SGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV 121
+G A K + GHAGA G + +A++K +AL AGA V
Sbjct: 234 AGLTAPPGK---RMGHAGAIIEGGVGTAESKIKALEAAGARV 272
>sp|Q5HPU4|SUCD_STAEQ Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=sucD PE=3
SV=1
Length = 302
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
+ +K+ +NKPVV ++ G A K + GHAGA G +A K + L D G
Sbjct: 219 AQWIKE-NMNKPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTASEKIKTLNDCG 270
>sp|Q8CPH4|SUCD_STAES Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=sucD PE=3 SV=1
Length = 302
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
+ +K+ +NKPV+ ++ G A K + GHAGA G +A K + L D G
Sbjct: 219 AQWIKE-NMNKPVIGFIGGQTAPPGK---RMGHAGAIISGGKGTASEKIKTLNDCG 270
>sp|P13086|SUCA_RAT Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Suclg1 PE=2 SV=2
Length = 346
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ---GKVNKPVV 76
I IGGD F G+ D + F P + +V++GE+GG E + E LK+ G KPVV
Sbjct: 224 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 283
Query: 77 AWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 136
++++G A + + GHAGA G A+ K AL+ AG +V S + + + F
Sbjct: 284 SFIAGITAPPGR---RMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYKEF 340
Query: 137 EK 138
EK
Sbjct: 341 EK 342
>sp|P99070|SUCD_STAAN Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain N315) GN=sucD PE=1 SV=1
Length = 302
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
E +K + KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 219 AEWIK-ANMTKPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|P66866|SUCD_STAAM Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=sucD PE=1 SV=1
Length = 302
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
E +K + KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 219 AEWIK-ANMTKPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|Q5HGI6|SUCD_STAAC Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain COL) GN=sucD PE=3 SV=1
Length = 302
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
E +K + KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 219 AEWIK-ANMTKPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|Q6GHI9|SUCD_STAAR Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=sucD PE=3 SV=1
Length = 302
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
E +K + KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 219 AEWIK-ANMTKPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|P09143|SUCD_THETH Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Thermus
thermophilus GN=sucD PE=1 SV=1
Length = 288
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 25 DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCA 84
D G+T D + FN P+ + +V++GE+GG DE +K + KPVV ++ G A
Sbjct: 180 DPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD-HMKKPVVGFIGGRSA 238
Query: 85 RLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 136
K + GHAGA G + + ++K +A +AG V + + +K+
Sbjct: 239 PKGK---RMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 287
>sp|Q8NX01|SUCD_STAAW Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=sucD PE=3 SV=1
Length = 302
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
E +K + KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 219 AEWIK-ANMTKPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|Q6G9W7|SUCD_STAAS Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=sucD PE=3 SV=1
Length = 302
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 62
Y + ++T+ G + IGGD G+ D + FN + K +V++GE+GG E
Sbjct: 159 YEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA 218
Query: 63 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 118
E +K + KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 219 AEWIK-ANMTKPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|P80865|SUCD_BACSU Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Bacillus
subtilis (strain 168) GN=sucD PE=1 SV=3
Length = 300
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
++ E + ++ G + IGGD G+ D + FN P ++++GE+GG E
Sbjct: 157 LTYEAVHQLSEAGVGQSTAVGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEE 216
Query: 61 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV 120
E +K + KPVV ++ G A K + GHAGA G +A K + L G
Sbjct: 217 EAAEWVKA-NMTKPVVGFIGGKTAPPGK---RMGHAGAIISGGKGTADEKIKTLNACGIE 272
Query: 121 VPTSYEAFESAIKETFEKLVEE 142
V + S + ET K+++E
Sbjct: 273 VAET----PSVMGETLIKVLKE 290
>sp|P80148|CISY_SULSO Citrate synthase OS=Sulfolobus solfataricus (strain ATCC 35092 /
DSM 1617 / JCM 11322 / P2) GN=gltA PE=1 SV=3
Length = 377
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 228 CIMLCADHG-PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAY 285
++L DH P + A +V A D+ SSL + L + GP GGA ++A + F +
Sbjct: 176 ALILYTDHEVPASTTA--ALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQFIEIG 233
Query: 286 DRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFART----HFPSVKYMEY 341
D F + + + R+ G GHR+ + D R ++ +K A T + + +Y E
Sbjct: 234 DPNRVQNWFNDKVVNQKNRLMGFGHRVYK--TYDPRAKIFKKLALTLIERNADARRYFEI 291
Query: 342 AVQVETYTLSK--ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLA 399
A ++E + + + + N D G +F L MF+ LF L+
Sbjct: 292 AQKLEELGIKQFSSKGIYPNTDFYSGIVFYALGFPVYMFT--------------ALFALS 337
Query: 400 RSIGLIGHTF----DQKRLKQP--LYRHP 422
R++G + H +Q RL +P LY P
Sbjct: 338 RTLGWLAHIIEYVEEQHRLIRPRALYVGP 366
>sp|O13750|SUCA_SCHPO Probable succinyl-CoA ligase [ADP-forming] subunit alpha,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC16E8.17c PE=3 SV=1
Length = 331
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 60
++ E N + G I IGGD FPG+ D + F + P + ++++GE+GG E
Sbjct: 190 LTYEAVNQTTQTDLGQSLVIGIGGDPFPGTNFIDALKLFLDDPNTQGIILIGEIGGSAEE 249
Query: 61 SLVEALKQGKVN----KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRD 116
E ++ + KPVV++++G A + + GHAGA G +A AK +AL
Sbjct: 250 DAAEFIRAANASRSTPKPVVSFIAGATAPKGR---RMGHAGAIVAGGKGTAAAKFEALEA 306
Query: 117 AGAVVPTSYEAFESAIKETFEKL 139
AG + S S I E KL
Sbjct: 307 AGVRISRSPATLGSLIVEELNKL 329
>sp|P53400|SUCA2_TRIVA Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial
OS=Trichomonas vaginalis GN=ALPHA-SCS2 PE=3 SV=1
Length = 309
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 20 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN--KPVVA 77
+ IGGD F G +D I RF PQ + ++++GE+GG E E + + K+ KPVVA
Sbjct: 188 VGIGGDPFAGQLHTDVIKRFAADPQTEGIILIGEIGGTSEEDAAEWIAKTKLTQEKPVVA 247
Query: 78 WVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV---PTSYEAFESAIKE 134
+++G A K + GHAGA G +A+ K +AL AG + P + F
Sbjct: 248 FIAGATAPPGK---RMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKF------ 298
Query: 135 TFEKLVEEGKI 145
FE++ GKI
Sbjct: 299 IFEEMKRLGKI 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,765,023
Number of Sequences: 539616
Number of extensions: 7095113
Number of successful extensions: 19874
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 19755
Number of HSP's gapped (non-prelim): 112
length of query: 430
length of database: 191,569,459
effective HSP length: 120
effective length of query: 310
effective length of database: 126,815,539
effective search space: 39312817090
effective search space used: 39312817090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)