Query 014132
Match_columns 430
No_of_seqs 272 out of 2321
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 06:02:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h12_A Citrate synthase; acido 100.0 9.7E-62 3.3E-66 500.4 18.7 323 26-421 75-418 (436)
2 3msu_A Citrate synthase; helix 100.0 1.8E-61 6.3E-66 495.9 15.0 321 26-421 76-415 (427)
3 3l96_A Citrate synthase; quate 100.0 2.4E-62 8.2E-67 502.8 3.1 324 26-421 67-408 (426)
4 2p2w_A Citrate synthase; trans 100.0 5.5E-59 1.9E-63 471.6 23.5 326 16-421 16-349 (367)
5 1vgm_A 378AA long hypothetical 100.0 6E-60 2.1E-64 480.3 16.2 330 17-421 20-360 (378)
6 2c6x_A Citrate synthase 1; tri 100.0 6.4E-59 2.2E-63 470.1 22.4 328 16-422 15-352 (363)
7 3hwk_A Methylcitrate synthase; 100.0 4.8E-59 1.6E-63 476.3 20.0 320 25-421 73-398 (414)
8 1o7x_A Citrate synthase; lyase 100.0 2.2E-58 7.4E-63 468.7 23.2 330 17-421 19-359 (377)
9 1iom_A Citrate synthase; open 100.0 4.3E-58 1.5E-62 466.5 25.0 333 16-421 17-358 (377)
10 1aj8_A Citrate synthase; hyper 100.0 2.3E-58 7.9E-63 467.6 22.6 322 25-421 25-352 (371)
11 1csh_A Citrate synthase; lyase 100.0 3.2E-59 1.1E-63 481.9 15.9 237 159-422 170-421 (435)
12 3tqg_A 2-methylcitrate synthas 100.0 3.5E-59 1.2E-63 473.2 15.7 321 23-421 29-356 (375)
13 1vgp_A 373AA long hypothetical 100.0 2.6E-58 8.9E-63 467.8 21.3 323 16-415 17-350 (373)
14 1a59_A Citrate synthase; cold- 100.0 5.6E-58 1.9E-62 466.3 23.4 332 16-421 19-365 (378)
15 3o8j_A 2-methylcitrate synthas 100.0 5.3E-59 1.8E-63 475.1 14.7 320 23-415 55-380 (404)
16 2ifc_A Citrate synthase; oxalo 100.0 7.7E-58 2.6E-62 465.8 22.8 331 17-421 22-366 (385)
17 2ibp_A Citrate synthase; disul 100.0 1.1E-57 3.8E-62 467.2 21.9 334 25-421 46-391 (409)
18 3mwd_B ATP-citrate synthase; A 100.0 1.2E-31 4.1E-36 268.4 17.8 154 1-154 180-333 (334)
19 3pff_A ATP-citrate synthase; p 100.0 7.7E-29 2.6E-33 272.0 16.8 153 1-153 666-818 (829)
20 2yv2_A Succinyl-COA synthetase 100.0 1E-28 3.5E-33 244.2 14.0 134 1-137 163-296 (297)
21 2fp4_A Succinyl-COA ligase [GD 100.0 2.2E-28 7.4E-33 242.7 15.9 135 1-138 164-301 (305)
22 1oi7_A Succinyl-COA synthetase 100.0 1.4E-28 4.7E-33 242.2 14.2 132 1-136 156-287 (288)
23 2yv1_A Succinyl-COA ligase [AD 100.0 1.3E-28 4.3E-33 243.2 13.0 132 1-137 162-293 (294)
24 2nu8_A Succinyl-COA ligase [AD 100.0 3.9E-28 1.3E-32 239.0 14.6 132 1-136 156-287 (288)
25 2csu_A 457AA long hypothetical 99.8 2.8E-21 9.7E-26 201.4 11.0 119 1-132 161-283 (457)
26 3dmy_A Protein FDRA; predicted 99.7 5.1E-17 1.8E-21 169.5 7.0 108 1-137 124-236 (480)
27 3tqg_A 2-methylcitrate synthas 95.5 0.041 1.4E-06 55.5 9.0 108 171-284 13-129 (375)
28 3o8j_A 2-methylcitrate synthas 95.0 0.057 1.9E-06 55.0 8.3 87 175-267 43-133 (404)
29 3hwk_A Methylcitrate synthase; 94.7 0.063 2.2E-06 54.8 7.8 106 173-284 57-172 (414)
30 1vgp_A 373AA long hypothetical 94.6 0.093 3.2E-06 52.9 8.8 86 175-266 13-102 (373)
31 2p2w_A Citrate synthase; trans 94.4 0.038 1.3E-06 55.6 5.4 88 175-268 12-103 (367)
32 1iom_A Citrate synthase; open 94.2 0.095 3.2E-06 52.9 7.8 87 174-266 12-102 (377)
33 3ufx_B Succinyl-COA synthetase 94.2 0.081 2.8E-06 53.7 7.4 104 5-132 263-370 (397)
34 2h12_A Citrate synthase; acido 93.9 0.04 1.4E-06 56.7 4.4 87 175-267 60-150 (436)
35 3l96_A Citrate synthase; quate 93.5 0.44 1.5E-05 48.8 11.2 85 177-267 54-142 (426)
36 1o7x_A Citrate synthase; lyase 92.8 0.08 2.7E-06 53.4 4.5 86 175-266 14-103 (377)
37 2c6x_A Citrate synthase 1; tri 92.5 0.093 3.2E-06 52.7 4.4 103 176-284 12-121 (363)
38 1aj8_A Citrate synthase; hyper 92.5 0.089 3E-06 53.0 4.3 85 176-266 12-100 (371)
39 1a59_A Citrate synthase; cold- 92.3 0.094 3.2E-06 52.9 4.2 87 174-266 14-104 (378)
40 1vgm_A 378AA long hypothetical 92.0 0.1 3.6E-06 52.6 4.2 86 175-266 15-104 (378)
41 1csh_A Citrate synthase; lyase 91.5 0.12 4E-06 53.2 3.9 97 167-268 41-148 (435)
42 2ifc_A Citrate synthase; oxalo 91.4 0.13 4.4E-06 52.1 4.0 87 174-266 16-107 (385)
43 2csu_A 457AA long hypothetical 90.8 1.1 3.7E-05 46.1 10.4 98 17-137 342-446 (457)
44 2ibp_A Citrate synthase; disul 90.6 0.18 6E-06 51.5 4.2 91 171-267 28-121 (409)
45 3msu_A Citrate synthase; helix 89.9 0.41 1.4E-05 49.0 6.1 85 177-267 63-151 (427)
46 2nu8_B SCS-beta, succinyl-COA 88.2 3.5 0.00012 41.5 11.6 106 5-134 272-383 (388)
47 2fp4_B Succinyl-COA ligase [GD 88.0 2.2 7.6E-05 43.0 10.1 106 5-134 279-390 (395)
48 3rst_A Signal peptide peptidas 84.4 0.64 2.2E-05 43.6 3.6 55 30-84 32-91 (240)
49 3kqf_A Enoyl-COA hydratase/iso 82.8 2.6 8.8E-05 39.9 7.2 54 31-84 40-114 (265)
50 3dmy_A Protein FDRA; predicted 81.3 6.2 0.00021 40.9 9.9 89 30-137 314-413 (480)
51 1hzd_A AUH, AU-binding protein 78.8 3.1 0.00011 39.4 6.3 53 32-84 44-117 (272)
52 3lke_A Enoyl-COA hydratase; ny 78.6 2.1 7.3E-05 40.4 5.0 53 32-84 36-113 (263)
53 3p5m_A Enoyl-COA hydratase/iso 76.4 4 0.00014 38.3 6.2 54 31-84 37-104 (255)
54 4hdt_A 3-hydroxyisobutyryl-COA 76.0 4.1 0.00014 40.3 6.4 53 32-84 41-117 (353)
55 3qmj_A Enoyl-COA hydratase, EC 73.8 5.1 0.00017 37.5 6.2 53 32-84 38-111 (256)
56 3gkb_A Putative enoyl-COA hydr 73.2 4.2 0.00014 39.0 5.5 24 32-55 40-63 (287)
57 2uzf_A Naphthoate synthase; ly 73.2 4.2 0.00014 38.6 5.5 51 32-84 45-119 (273)
58 3swx_A Probable enoyl-COA hydr 73.2 4.5 0.00015 38.1 5.7 54 31-84 40-114 (265)
59 3lao_A Enoyl-COA hydratase/iso 72.9 4.2 0.00014 38.2 5.4 53 32-84 44-117 (258)
60 1sg4_A 3,2-trans-enoyl-COA iso 72.7 5.2 0.00018 37.6 6.0 53 32-84 36-109 (260)
61 3t89_A 1,4-dihydroxy-2-naphtho 72.5 4.9 0.00017 38.6 5.8 53 32-84 60-135 (289)
62 3t8b_A 1,4-dihydroxy-2-naphtho 71.7 4.3 0.00015 39.9 5.3 24 32-55 89-112 (334)
63 2pbp_A Enoyl-COA hydratase sub 71.5 7.7 0.00026 36.3 6.9 53 32-84 37-107 (258)
64 4di1_A Enoyl-COA hydratase ECH 71.1 5.2 0.00018 38.2 5.6 53 32-84 55-127 (277)
65 3myb_A Enoyl-COA hydratase; ss 70.9 4.6 0.00016 38.7 5.2 53 32-84 58-131 (286)
66 2ppy_A Enoyl-COA hydratase; be 70.8 5.9 0.0002 37.3 5.9 53 32-84 40-113 (265)
67 3gow_A PAAG, probable enoyl-CO 69.5 9.5 0.00033 35.6 7.0 53 32-84 32-103 (254)
68 4eml_A Naphthoate synthase; 1, 69.5 5.6 0.00019 37.8 5.4 53 32-84 42-121 (275)
69 4fzw_A 2,3-dehydroadipyl-COA h 69.4 8.5 0.00029 36.1 6.6 53 32-84 37-107 (258)
70 1szo_A 6-oxocamphor hydrolase; 69.0 7.9 0.00027 36.4 6.3 54 31-84 47-120 (257)
71 3hrx_A Probable enoyl-COA hydr 69.0 10 0.00034 35.4 7.0 53 32-84 32-103 (254)
72 3fdu_A Putative enoyl-COA hydr 68.9 6.3 0.00021 37.2 5.6 53 32-84 37-111 (266)
73 3g64_A Putative enoyl-COA hydr 68.8 6.3 0.00021 37.4 5.6 53 32-84 49-125 (279)
74 3l3s_A Enoyl-COA hydratase/iso 68.7 10 0.00036 35.6 7.1 23 32-54 38-60 (263)
75 3rrv_A Enoyl-COA hydratase/iso 68.4 5.4 0.00018 38.0 5.1 53 32-84 60-134 (276)
76 1uiy_A Enoyl-COA hydratase; ly 68.3 8.3 0.00028 35.9 6.3 53 32-84 31-106 (253)
77 3oc7_A Enoyl-COA hydratase; se 68.0 6.9 0.00024 36.8 5.7 23 32-54 43-65 (267)
78 2j5g_A ALR4455 protein; enzyme 68.0 11 0.00036 35.6 7.0 54 31-84 55-129 (263)
79 2vx2_A Enoyl-COA hydratase dom 67.8 8.1 0.00028 36.9 6.2 53 32-84 65-138 (287)
80 2a7k_A CARB; crotonase, antibi 67.7 11 0.00038 35.0 7.0 53 32-84 32-106 (250)
81 3pea_A Enoyl-COA hydratase/iso 67.2 7.4 0.00025 36.6 5.7 53 32-84 37-110 (261)
82 3moy_A Probable enoyl-COA hydr 66.9 8.3 0.00028 36.3 6.0 53 32-84 42-112 (263)
83 3i47_A Enoyl COA hydratase/iso 66.7 9.2 0.00031 36.1 6.3 53 32-84 36-111 (268)
84 4fzw_C 1,2-epoxyphenylacetyl-C 66.0 9.1 0.00031 36.3 6.1 53 32-84 47-123 (274)
85 4f47_A Enoyl-COA hydratase ECH 65.8 6.3 0.00021 37.4 5.0 54 31-84 51-127 (278)
86 3qk8_A Enoyl-COA hydratase ECH 65.4 13 0.00044 35.1 7.1 54 31-84 44-119 (272)
87 3sll_A Probable enoyl-COA hydr 65.2 11 0.00036 36.1 6.5 23 32-54 56-78 (290)
88 3h0u_A Putative enoyl-COA hydr 64.6 11 0.00037 36.1 6.4 53 32-84 39-115 (289)
89 1nzy_A Dehalogenase, 4-chlorob 64.3 9 0.00031 36.1 5.7 53 32-84 35-112 (269)
90 2ej5_A Enoyl-COA hydratase sub 63.5 11 0.00036 35.3 6.0 53 32-84 35-106 (257)
91 1ef8_A Methylmalonyl COA decar 62.9 7.3 0.00025 36.5 4.8 52 32-84 36-108 (261)
92 3ju1_A Enoyl-COA hydratase/iso 62.5 12 0.00042 37.7 6.6 24 32-55 74-97 (407)
93 3r9t_A ECHA1_1; ssgcid, seattl 62.5 9.5 0.00033 36.0 5.5 53 32-84 41-113 (267)
94 3bf0_A Protease 4; bacterial, 62.2 3.9 0.00013 43.4 3.0 55 30-84 325-383 (593)
95 3pe8_A Enoyl-COA hydratase; em 61.9 7 0.00024 36.7 4.4 53 32-84 41-104 (256)
96 3trr_A Probable enoyl-COA hydr 61.9 4.7 0.00016 37.9 3.2 53 32-84 39-105 (256)
97 3rsi_A Putative enoyl-COA hydr 61.7 8 0.00027 36.4 4.8 53 32-84 41-114 (265)
98 1wz8_A Enoyl-COA hydratase; ly 60.2 13 0.00046 34.8 6.1 53 32-84 42-116 (264)
99 3h81_A Enoyl-COA hydratase ECH 60.0 13 0.00045 35.3 6.0 53 32-84 57-127 (278)
100 3bpt_A 3-hydroxyisobutyryl-COA 59.9 17 0.00058 35.9 7.0 53 32-84 38-114 (363)
101 3qre_A Enoyl-COA hydratase, EC 59.5 9 0.00031 36.8 4.8 23 32-54 62-84 (298)
102 1mj3_A Enoyl-COA hydratase, mi 58.7 7.9 0.00027 36.3 4.2 53 32-84 39-109 (260)
103 1dci_A Dienoyl-COA isomerase; 58.4 8.5 0.00029 36.3 4.4 23 32-54 36-58 (275)
104 3qxi_A Enoyl-COA hydratase ECH 57.2 6 0.0002 37.3 3.0 54 31-84 46-114 (265)
105 2lnd_A De novo designed protei 56.9 33 0.0011 26.8 6.6 60 60-139 38-102 (112)
106 1y7o_A ATP-dependent CLP prote 56.6 7.7 0.00026 35.6 3.6 52 31-84 61-115 (218)
107 3t3w_A Enoyl-COA hydratase; ss 55.9 14 0.00047 35.1 5.4 25 31-55 51-75 (279)
108 2q35_A CURF; crotonase, lyase; 55.5 15 0.00052 34.0 5.5 51 32-84 35-102 (243)
109 3bv8_A Tetrahydrodipicolinate 55.2 13 0.00044 29.5 4.1 53 60-116 7-63 (87)
110 3tlf_A Enoyl-COA hydratase/iso 53.9 12 0.00041 35.3 4.6 23 32-54 43-65 (274)
111 3he2_A Enoyl-COA hydratase ECH 53.8 12 0.00041 35.4 4.5 52 32-84 53-119 (264)
112 3viv_A 441AA long hypothetical 52.7 15 0.00052 34.1 4.9 64 18-84 11-82 (230)
113 3njd_A Enoyl-COA hydratase; ss 52.0 7.8 0.00027 37.9 3.0 23 32-54 67-89 (333)
114 2j5i_A P-hydroxycinnamoyl COA 49.9 23 0.00079 33.4 5.9 53 32-84 41-118 (276)
115 2cby_A ATP-dependent CLP prote 49.5 12 0.00041 34.0 3.7 64 19-84 29-97 (208)
116 3qxz_A Enoyl-COA hydratase/iso 48.1 7.1 0.00024 36.8 1.9 53 32-84 39-110 (265)
117 1pjh_A Enoyl-COA isomerase; EC 47.5 25 0.00087 33.1 5.8 23 32-54 41-63 (280)
118 3r6h_A Enoyl-COA hydratase, EC 44.2 29 0.001 31.8 5.5 52 32-84 36-107 (233)
119 1yg6_A ATP-dependent CLP prote 43.7 17 0.00058 32.5 3.6 64 19-84 28-96 (193)
120 2f6q_A Peroxisomal 3,2-trans-e 43.5 47 0.0016 31.3 7.0 52 32-84 58-133 (280)
121 3zwc_A Peroxisomal bifunctiona 43.1 32 0.0011 37.5 6.3 53 31-83 51-117 (742)
122 1wdk_A Fatty oxidation complex 37.5 36 0.0012 36.7 5.7 52 32-84 40-115 (715)
123 3hin_A Putative 3-hydroxybutyr 35.1 33 0.0011 32.4 4.3 43 42-84 56-118 (275)
124 3m6n_A RPFF protein; enoyl-COA 34.0 52 0.0018 31.5 5.6 23 32-54 68-95 (305)
125 2np9_A DPGC; protein inhibitor 33.3 54 0.0018 33.4 5.8 22 32-53 199-220 (440)
126 3ot6_A Enoyl-COA hydratase/iso 33.1 48 0.0016 30.3 5.0 51 32-84 37-106 (232)
127 2w3p_A Benzoyl-COA-dihydrodiol 31.5 45 0.0015 35.0 4.9 23 31-53 62-86 (556)
128 3hp0_A Putative polyketide bio 31.2 66 0.0023 30.1 5.7 52 32-84 39-112 (267)
129 3isa_A Putative enoyl-COA hydr 30.9 85 0.0029 29.0 6.4 52 32-84 39-110 (254)
130 2fbm_A Y chromosome chromodoma 30.5 74 0.0025 30.2 6.0 52 32-84 56-131 (291)
131 3qwd_A ATP-dependent CLP prote 29.1 40 0.0014 30.5 3.6 64 19-84 29-97 (203)
132 2gtr_A CDY-like, chromodomain 27.6 89 0.003 28.9 5.9 53 31-84 37-113 (261)
133 3bf0_A Protease 4; bacterial, 25.7 41 0.0014 35.5 3.5 51 31-81 74-129 (593)
134 3p2l_A ATP-dependent CLP prote 24.6 54 0.0018 29.6 3.6 64 19-84 32-100 (201)
135 2wtb_A MFP2, fatty acid multif 24.2 52 0.0018 35.6 4.0 21 32-52 39-59 (725)
136 2f6i_A ATP-dependent CLP prote 23.1 60 0.0021 29.5 3.7 63 19-84 41-108 (215)
No 1
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=9.7e-62 Score=500.41 Aligned_cols=323 Identities=20% Similarity=0.313 Sum_probs=251.0
Q ss_pred ccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccccccccccccCC
Q 014132 26 VFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGE 103 (430)
Q Consensus 26 ~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~~~~ 103 (430)
.|+|.++.|+.+. ..-+++-..+++||.|..+|.+. .+-++ .+..+..|..++.+. |.. .|..++.
T Consensus 75 ~YRGy~I~dLa~~-~~feEvayLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~~~~~-----p~~---~hPM~~l--- 142 (436)
T 2h12_A 75 LHRGYPIAQLAEN-ASYEEVIYLLLNGELPNKAQYDTFTNTLTNHTLLHEQIRNFFNGF-----RRD---AHPMAIL--- 142 (436)
T ss_dssp EETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCSCCGGGHHHHTTS-----CTT---CCHHHHH---
T ss_pred EECCeEHHHHHhc-CCHHHHHHHHHcCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHhC-----CCC---CCHHHHH---
Confidence 6999999999985 34555777789999998776543 22222 222333333333221 111 1332221
Q ss_pred cCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCCCchhhHHHHHhcchhhHHHHHHhhccC
Q 014132 104 MESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVK-EVTPPQIPEDLNTAIKSGKVRAPTHIISTISDD 182 (430)
Q Consensus 104 ~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~-e~~~~~~~~~~~~~~l~ak~p~i~a~~~~i~~~ 182 (430)
..+-.+| +.++|+. +...+ ....+++++|+||+|+|++++|+ +.
T Consensus 143 --------------------------~~~v~aL------~~~~~~~~~~~~~-~~~~~~a~rLiAk~ptiaa~~yr--~~ 187 (436)
T 2h12_A 143 --------------------------CGTVGAL------SAFYPDANDIAIP-ANRDLAAMRLIAKIPTIAAWAYK--YT 187 (436)
T ss_dssp --------------------------HHHHHHH------GGGCC---------CCHHHHHHHHHHHHHHHHHHHHH--HH
T ss_pred --------------------------HHHHHHH------hhcCcccccCCCH-HHHHHHHHHHHHHHHHHHHHHHH--Hh
Confidence 1111111 1223321 11112 34467899999999999999999 45
Q ss_pred CCCcccccCCCcchhhhccCCHHHHHHHhhhCCC-----CchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHH
Q 014132 183 RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRS-----LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVS 257 (430)
Q Consensus 183 ~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~-----~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~ 257 (430)
.|++++++..++++ .+||++|+ ++.. |++.++++||++||||||||+|+|| |++|+++||++|+|+
T Consensus 188 ~g~~~~~p~~~ls~-------a~nfl~ml-~g~~~~~~~~~~~~~~~ld~~LiLhADHe~NaST-ftaRvvaSt~ad~ys 258 (436)
T 2h12_A 188 QGEAFIYPRNDLNY-------AENFLSMM-FARMSEPYKVNPVLARAMNRILILHADHEQNAST-STVRLAGSTGANPFA 258 (436)
T ss_dssp HTCCCCCCCTTSCH-------HHHHHHHH-HCBTTBCCCCCHHHHHHHHHHHHHHSCCSSCHHH-HHHHHHHTTTCCHHH
T ss_pred cCCCCCCCCCCCCH-------HHHHHHHh-cCCCCccCCCCHHHHHHHHhhheeecCCCCchHH-HHHHHHHhcCccHHH
Confidence 67788888888766 66677766 6654 8889999999999999999999999 999999999999999
Q ss_pred HHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcC--CCCCCCCCCCCCCCCCcHHHHHHHHHHHHh--
Q 014132 258 SLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKG--IRVPGIGHRIKRGDNRDKRVELLQKFARTH-- 332 (430)
Q Consensus 258 av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~--~~ipGFGH~vy~~~~~DPRa~~L~~~~~~~-- 332 (430)
|++||++++ ||+|||||++|++||+++.+. +++++||++.++++ ++|||||||||+ +.|||+++|+++++++
T Consensus 259 aiaAgi~aL~GPlHGGAne~v~~ml~ei~~~-~~v~~~i~~~l~~~~g~~imGFGHrVYk--~~DPRa~iLk~~a~~l~~ 335 (436)
T 2h12_A 259 CIAAGIAALWGPAHGGANEAVLKMLARIGKK-ENIPAFIAQVKDKNSGVKLMGFGHRVYK--NFDPRAKIMQQTCHEVLT 335 (436)
T ss_dssp HHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHCTTSCCCCTTBCCSSCS--SCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCHHHHHHHHHHHhcCc-hHHHHHHHHHHhccCCCcccCCCccccC--CCCCcHHHHHHHHHHHHH
Confidence 999999998 999999999999999999866 68999999999955 999999999997 4799999999999987
Q ss_pred --CC-CChHHHHHHHHHHHHhhc----cCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhh
Q 014132 333 --FP-SVKYMEYAVQVETYTLSK----ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLI 405 (430)
Q Consensus 333 --~~-~~~~~~~a~~~e~~~~~~----~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~Gwi 405 (430)
+. ++++++++.++|+++.++ .|+++||||||+|+++++||||.+|||+ ||++||++||+
T Consensus 336 ~~g~~~~~~~~la~~lE~~al~~~~~~~k~l~pNVDfysg~i~~~lGiP~~~ft~--------------lFaisR~~GW~ 401 (436)
T 2h12_A 336 ELGIKDDPLLDLAVELEKIALSDDYFVQRKLYPNVDFYSGIILKAMGIPTSMFTV--------------LFAVARTTGWV 401 (436)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHSHHHHHTTCCBCTHHHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHHHHHhhhhccccCCCcChHHHHHHHHHHhCCChhhhhh--------------hhhhhccccHH
Confidence 32 689999999999997654 5999999999999999999999999998 99999999999
Q ss_pred hhHHHhhhhc-CCCCCC
Q 014132 406 GHTFDQKRLK-QPLYRH 421 (430)
Q Consensus 406 AH~~Eq~~~~-~P~~r~ 421 (430)
|||+||+..+ ..|.||
T Consensus 402 AH~~Eq~~~~~~kI~RP 418 (436)
T 2h12_A 402 SQWKEMIEEPGQRISRP 418 (436)
T ss_dssp HHHHHHHHSTTCCCCCC
T ss_pred HHHHHHHhCCCCceecc
Confidence 9999999654 346666
No 2
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=1.8e-61 Score=495.87 Aligned_cols=321 Identities=17% Similarity=0.246 Sum_probs=249.1
Q ss_pred ccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHH-HcCCCCCCEEEEecCCcccccccccccccccccccCC
Q 014132 26 VFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEAL-KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGE 103 (430)
Q Consensus 26 ~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~-~~~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~~~~ 103 (430)
.|+|.++.|+.+. ..-+++-..+++||.|..+|.+. .+-+ +.+..+..|..++.+. |... |..++..
T Consensus 76 ~YRGy~I~dLa~~-~~feevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~i~~~-----p~~~---hPM~~L~-- 144 (427)
T 3msu_A 76 LHRGYPIEEWTQK-SNYRTLCYALIYGELPTDEQVKSFRQEIINKMPVCEHVKAAIAAM-----PQHT---HPMSSLI-- 144 (427)
T ss_dssp EETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHS-----CTTC---CHHHHHH--
T ss_pred EECCeEHHHHhcc-CCHHHHHHHHHcCcCCCHHHHHHHHHHHHHccCCCHHHHHHHHhC-----CCCC---CHHHHHH--
Confidence 6899999999874 12345666789999998776543 2222 2223334444433222 2221 4333221
Q ss_pred cCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHHHHHHhhccCC
Q 014132 104 MESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDR 183 (430)
Q Consensus 104 ~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~a~~~~i~~~~ 183 (430)
+. ..+|.. .. .+ ...+ ....++++||+||+|+|++++|+ +..
T Consensus 145 --~~---v~aL~~------------------~~---~~---------~~~~-~~~~~~a~rLiAk~pti~a~~yr--~~~ 186 (427)
T 3msu_A 145 --AG---VNVLAA------------------EH---IH---------NGQK-ESQDEVAKNIVAKIATIAAMAYR--HNH 186 (427)
T ss_dssp --HH---HHHHHH------------------HH---HH---------TTSC-CCHHHHHHHHHHHHHHHHHHHHH--HHT
T ss_pred --HH---HHHHhh------------------hc---cC---------CCCH-HHHHHHHHHHHHHHHHHHHHHHH--HHc
Confidence 11 111110 00 01 1112 23466889999999999999999 557
Q ss_pred CCcccccCCCcchhhhccCCHHHHHHHhhhCC----CCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHHHH
Q 014132 184 GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKR----SLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSL 259 (430)
Q Consensus 184 g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~----~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~av 259 (430)
|+++.+|..++++ .+||++|+ ++. +|++.++++||++||||||||+|+|| |++|+++||++|+|+|+
T Consensus 187 G~~~~~p~~~ls~-------a~NfL~ml-~~~~~~~~p~~~~~~~ld~~LiLhADHe~N~ST-~taRvvaSt~ad~ysav 257 (427)
T 3msu_A 187 GKKFLEPKMEYGY-------AENFLYMM-FADDESYKPDELHIKAMDTIFMLHADHEQNAST-STVRLSGSTGNSPYAAI 257 (427)
T ss_dssp TCCCCCCCTTSCH-------HHHHHHHH-HCSSTTCCCCHHHHHHHHHHHHHHSCCSSCHHH-HHHHHHHTTTCCHHHHH
T ss_pred CCCCCCCCCccCH-------HHHHHHHH-hcccccCCCCHHHHHHHHHHHhhccCCCCChhH-HHHHHHHccCCCHHHHH
Confidence 8899989888877 67777777 676 78899999999999999999999999 99999999999999999
Q ss_pred HHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCC--CCCCCCCCCCCCCCCcHHHHHHHHHHHHh----
Q 014132 260 VSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI--RVPGIGHRIKRGDNRDKRVELLQKFARTH---- 332 (430)
Q Consensus 260 ~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~--~ipGFGH~vy~~~~~DPRa~~L~~~~~~~---- 332 (430)
+||++++ ||+|||||++|++||+++.+. +++++||++.+++++ +|||||||||+ +.|||+++|+++++++
T Consensus 258 aAgi~aL~GPlHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~~i~GFGHrVYk--~~DPRa~~Lk~~a~~l~~~~ 334 (427)
T 3msu_A 258 IAGITALWGPAHGGANEAVLKMLSEIGST-ENIDKYIAKAKDKDDPFRLMGFGHRVYK--NTDPRATAMKKNCEEILAKL 334 (427)
T ss_dssp HHHHHHHTSHHHHCHHHHHHHHHHHHCST-THHHHHHHHHHTC-----CCSBCCSSSS--SCCHHHHHHHHHTHHHHHHG
T ss_pred HHHHHHccCCccCCHHHHHHHHHHHhcCc-hHHHHHHHHHHhCCCCcCcCCCCCCCCC--CCCccHHHHHHHHHHHHHHh
Confidence 9999998 999999999999999999876 589999999999999 99999999997 5799999999998875
Q ss_pred C-CCChHHHHHHHHHHHHhh----ccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhh
Q 014132 333 F-PSVKYMEYAVQVETYTLS----KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGH 407 (430)
Q Consensus 333 ~-~~~~~~~~a~~~e~~~~~----~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH 407 (430)
+ .++++++++.++|+++.+ +.|+++||||||+|+++++||||.++||+ ||++||++||+||
T Consensus 335 g~~~~~~~~la~~le~~a~~d~~~~~k~l~pNVDfysg~i~~~lGip~~~ft~--------------lFaisR~~Gw~AH 400 (427)
T 3msu_A 335 GHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKAMGIPEDMFTA--------------IFALARTSGWISQ 400 (427)
T ss_dssp GGCSSHHHHHHHHHHHHHC------CCCCCBCHHHHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHhhcccccccCCCCChHHHHHHHHHHcCCCccccce--------------ehhHHhHHHHHHH
Confidence 2 368999999999999865 26899999999999999999999999998 9999999999999
Q ss_pred HHHhhhhc-CCCCCC
Q 014132 408 TFDQKRLK-QPLYRH 421 (430)
Q Consensus 408 ~~Eq~~~~-~P~~r~ 421 (430)
|+||+..+ ..|.||
T Consensus 401 ~~Eq~~~p~~rI~RP 415 (427)
T 3msu_A 401 WIEMVNDPAQKIGRP 415 (427)
T ss_dssp HHHHHHCTTCCCCCC
T ss_pred HHHHHhCCCCceeCC
Confidence 99999653 346666
No 3
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=2.4e-62 Score=502.77 Aligned_cols=324 Identities=18% Similarity=0.261 Sum_probs=256.3
Q ss_pred ccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccccccccccccCC
Q 014132 26 VFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGE 103 (430)
Q Consensus 26 ~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~~~~ 103 (430)
.|+|.++.|+.+. ..-.++-..+++||.|..+|.+. .+-++ .+..+..|..++.+. |... |..++.
T Consensus 67 ~YRGy~I~dLa~~-~~feevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~~~~~-----p~~~---hPM~~l--- 134 (426)
T 3l96_A 67 LHRGFPIDQLATD-SNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAF-----RRDS---HPMAVM--- 134 (426)
T ss_dssp EETTEEHHHHHHH-SCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHHTTS-----CTTS---CHHHHH---
T ss_pred EECCeEHHHHHhc-CCHHHHHHHHHCCcCCCHHHHHHHHHHHHHccCCCHHHHHHHHhc-----CCCC---CHHHHH---
Confidence 7999999999874 22345666789999998776543 22232 222333333333222 1111 322211
Q ss_pred cCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHHHHHHhhccCC
Q 014132 104 MESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDR 183 (430)
Q Consensus 104 ~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~a~~~~i~~~~ 183 (430)
. ..+. .++.++|..++.+......++++||+||+|+|++++|+ +..
T Consensus 135 --------------------------~---~~vs---aL~~~~~~~~~~~~~~~~~~~a~rLiAk~pti~a~~yr--~~~ 180 (426)
T 3l96_A 135 --------------------------C---GITG---ALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYK--YSI 180 (426)
T ss_dssp --------------------------H---HHHT---TGGGTCGGGCCTTSHHHHHHHHHHHHHHHHHHHHHHHH--HHH
T ss_pred --------------------------H---HHHH---HHHhhCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHC
Confidence 1 1111 12345555444433334456789999999999999999 456
Q ss_pred CCcccccCCCcchhhhccCCHHHHHHHhhhCC-----CCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHHH
Q 014132 184 GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKR-----SLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSS 258 (430)
Q Consensus 184 g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~-----~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~a 258 (430)
|+++.++..++++ .+||++|+ ++. +|++.++++||++||||||||+|+|| |++|+++||++|+|+|
T Consensus 181 G~~~~~p~~~ls~-------a~nfl~ml-~g~~~~~~~p~~~~~~~ld~~LiLhADHe~N~ST-~taRvvaSt~ad~ysa 251 (426)
T 3l96_A 181 GQPFVYPRNDLSY-------AGNFLNMM-FSTPCEPYEVNPILERAMDRILILHADHEQNAST-STVRTAGSSGANPFAC 251 (426)
T ss_dssp TCCCCCCCTTSCH-------HHHHHHHH-HCBTTBCCCCCHHHHHHHHHHHHTTSCCSSCHHH-HHHHHHHHTTCCHHHH
T ss_pred CCCCCCCCCCCCH-------HHHHHHHh-cCCCcccCCCCHHHHHHHHHHHhhcccCCCCchH-HHHHHHhccCCcHHHH
Confidence 8889989888877 67777777 666 78889999999999999999999999 9999999999999999
Q ss_pred HHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCC--CCCCCCCCCCCCCCCcHHHHHHHHHHHHh---
Q 014132 259 LVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI--RVPGIGHRIKRGDNRDKRVELLQKFARTH--- 332 (430)
Q Consensus 259 v~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~--~ipGFGH~vy~~~~~DPRa~~L~~~~~~~--- 332 (430)
++||++++ ||+|||||++|++||+++.+. +++++||++.+++++ +|||||||||+ +.|||+++|+++++++
T Consensus 252 iaAgi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~l~~~~~~~I~GfGHrVyk--~~DPRa~~l~~~a~~l~~~ 328 (426)
T 3l96_A 252 IAAGIASLWGPAHGGANEAALKMLEEIGKK-ENIPEFVRRAKDKNDSFRLMGFGHRVYK--NYDPRATVMRETCHEVLKE 328 (426)
T ss_dssp HHHHHHHHHTTTTSSHHHHHHHHHHHCCSS-SSTTTTSGGGCCSSCCTGGGTBCCSSCS--SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCccCCHHHHHHHHHHHhcCc-hhHHHHHHHHHhCCCCcCcCCCCCCCCC--CCCccHHHHHHHHHHHHHH
Confidence 99999998 999999999999999999766 589999999999998 99999999997 4799999999998865
Q ss_pred -CCCChHHHHHHHHHHHHhh----ccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhh
Q 014132 333 -FPSVKYMEYAVQVETYTLS----KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGH 407 (430)
Q Consensus 333 -~~~~~~~~~a~~~e~~~~~----~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH 407 (430)
+..+++++++.++|+++.+ +.|+++||||||+|+++++||||.++||+ ||++||++||+||
T Consensus 329 ~g~~~~~~~~a~~le~~~~~~~~~~~k~l~pNVDfysg~i~~~lGip~~~ft~--------------lFaisR~~Gw~AH 394 (426)
T 3l96_A 329 LGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTV--------------IFAMARTVGWIAH 394 (426)
T ss_dssp TCSCCSSTTHHHHHHHHHHHCHHHHHHTCCBCHHHHHHHHHHHTTCCTHHHHH--------------HHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhhcccccccCCCCchHHHHHHHHHHcCCCcccchh--------------hhHHHHHHHHHHH
Confidence 3368899999999999865 26899999999999999999999999998 9999999999999
Q ss_pred HHHhhhhcCCCCCC
Q 014132 408 TFDQKRLKQPLYRH 421 (430)
Q Consensus 408 ~~Eq~~~~~P~~r~ 421 (430)
|+||+....||.||
T Consensus 395 ~~Eq~~~~~~I~RP 408 (426)
T 3l96_A 395 WSEMHSDGMKIARP 408 (426)
T ss_dssp HHHHHHHHCCCCCC
T ss_pred HHHHHhcCCCccCC
Confidence 99999765577776
No 4
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=5.5e-59 Score=471.55 Aligned_cols=326 Identities=20% Similarity=0.250 Sum_probs=249.3
Q ss_pred eeEEEEecC-CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccc
Q 014132 16 IYEGIAIGG-DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQ 92 (430)
Q Consensus 16 ~S~~i~~Gg-d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~ 92 (430)
+|..-+-.| -.|.|.++.|+.+.. .-+++-..+++||.|..+|.+. .+.++ .+..+.+++.++.+. |...
T Consensus 16 Is~id~~~G~L~YRGy~i~dLa~~~-~feeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~~~~-----p~~~- 88 (367)
T 2p2w_A 16 ICYLDGINGRLYYRGIPVEELAEKS-TFEETAYFLWYGKLPTKSELEEFKRKMADYRELPAEALGILYHL-----PKNL- 88 (367)
T ss_dssp SEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHTTS-----CSCC-
T ss_pred CeEEECCCCEEEECCeeHHHHHcCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhC-----ccCC-
Confidence 344444323 568999999999853 4556666788999999776543 22222 222333344333222 1121
Q ss_pred cccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhH
Q 014132 93 FGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAP 172 (430)
Q Consensus 93 ~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i 172 (430)
|...+. ..++ ..++.++|. + ....+++++|+||+|+|
T Consensus 89 --hpM~~l----------~~~v-------------------------~~l~~~~~~-----~-~~~~~~a~~lia~~p~i 125 (367)
T 2p2w_A 89 --HYIDVL----------KIFL-------------------------SIHGSMDGN-----D-EDLREKAIRVASVFPTI 125 (367)
T ss_dssp --CHHHHH----------HHHH-------------------------SCC-------------CHHHHHHHHHHHHHHHH
T ss_pred --ChHHHH----------HHHH-------------------------HHHhccCCC-----h-HHHHHHHHHHHHHHHHH
Confidence 322211 0011 011222222 1 23345789999999999
Q ss_pred HHHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccC
Q 014132 173 THIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAG 252 (430)
Q Consensus 173 ~a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~ 252 (430)
++++|+. ..|++++.+..++++ .+||++|+ ++.. +.++++||++||||||||+|+|| |++|+++||+
T Consensus 126 ~a~~y~~--~~g~~~i~p~~~l~~-------a~nfl~ml-~~~~--~~~~~~ld~~LvL~ADHg~NaST-ftaRvvaSt~ 192 (367)
T 2p2w_A 126 LAYYYRY--SKGKELIRPRKDLSH-------VENFYYMM-FGER--NEKIRLLESAFILLMEQDINAST-FAALVIASTL 192 (367)
T ss_dssp HHHHHHH--HTTCCCCCCCTTSCH-------HHHHHHHH-HSCC--CTTHHHHHHHHHHHSCCSSCHHH-HHHHHHHTTT
T ss_pred HHHHHHH--HcCCCCCCCCCCCCH-------HHHHHHHh-cCCC--hHHHHHHHHHHhHhccCCCchHH-HHHHHHHhcC
Confidence 9999994 457777777777755 55666655 6654 67899999999999999999999 9999999999
Q ss_pred CChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 014132 253 KDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFART 331 (430)
Q Consensus 253 a~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~ 331 (430)
+|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||||+ +.|||+++|++++++
T Consensus 193 ad~ysavaagi~aL~GPlHGGAne~v~~ml~ei~~~-~~~~~~i~~~l~~~~~i~GfGHrVyk--~~DPRa~~l~~~a~~ 269 (367)
T 2p2w_A 193 SDLYSCIVGALGALKGPLHGGASEKVPPMLEEIGSE-DRVEEFVQKCLKEKRKIMGFGHRVYK--TYDPRAVFLKRVLQE 269 (367)
T ss_dssp CCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHHHTCCCTTBCCSSCS--SCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHccCCccCChHHHHHHHHHHhcCc-hhHHHHHHHHHHcCCccccCCccccC--CCCCchHHHHHHHHH
Confidence 99999999999999 999999999999999999876 58999999999999999999999997 479999999999999
Q ss_pred hCCCChHHHHHHHHHHHHhhc-cCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhhHHH
Q 014132 332 HFPSVKYMEYAVQVETYTLSK-ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFD 410 (430)
Q Consensus 332 ~~~~~~~~~~a~~~e~~~~~~-~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH~~E 410 (430)
+.+.+++++++.++|+++.+. .|+++||||||+|+++++||||.++||+ ||++||++||+|||+|
T Consensus 270 ~~~~~~~~~~a~~le~~~~~~~~k~l~pNVDf~sg~v~~~lGip~~~~t~--------------lFai~R~~Gw~AH~~E 335 (367)
T 2p2w_A 270 HFPDSKLFRIASKLEEYIVSNKIKNIYPNVDLYSSVLFEELGFPRNMFTA--------------LFATARVVGWTAHVIE 335 (367)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTGGGCCBCHHHHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHhCCChhhhhh--------------HHHHhccccHHHHHHH
Confidence 855679999999999998652 3899999999999999999999999998 9999999999999999
Q ss_pred hhhhc---CCCCCC
Q 014132 411 QKRLK---QPLYRH 421 (430)
Q Consensus 411 q~~~~---~P~~r~ 421 (430)
|++.+ ||..+|
T Consensus 336 q~~~~~iiRP~~~Y 349 (367)
T 2p2w_A 336 YVSDNKLIRPTSEY 349 (367)
T ss_dssp HHTTCCCCCCCCCC
T ss_pred HHhcCCccCccccc
Confidence 99543 444444
No 5
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=6e-60 Score=480.25 Aligned_cols=330 Identities=20% Similarity=0.244 Sum_probs=254.0
Q ss_pred eEEEEecC-CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHHc-CCCCCCEEEEecCCccccccccccc
Q 014132 17 YEGIAIGG-DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALKQ-GKVNKPVVAWVSGTCARLFKSEVQF 93 (430)
Q Consensus 17 S~~i~~Gg-d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~~-~~~~KPvv~~~~G~~~~~~p~g~~~ 93 (430)
|..-|-.| =.|+|.++.|+.+. ..-+++-..+++||.|..+|.+. .+.++. +..+.+++.++.+. |...
T Consensus 20 s~id~~~G~L~YRGy~i~dLa~~-~~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~~~~-----p~~~-- 91 (378)
T 1vgm_A 20 TYIDGINGILRYRGYDINDLVNY-ASYEELIHLMLYGELPNRQQLNQIKGIINESFEVPEQVISTIFSM-----PRNC-- 91 (378)
T ss_dssp EEEETTTTEEEETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHHHHTTS-----CTTS--
T ss_pred eEEECCCCeEEEcCeeHHHHHhc-CCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhC-----CCCC--
Confidence 44444333 56899999999985 34556667788999998776543 222221 12222333322111 1111
Q ss_pred ccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHH
Q 014132 94 GHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPT 173 (430)
Q Consensus 94 gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~ 173 (430)
|... ++..+-..+.. ++|...+ + ....+++++|+||+|+|+
T Consensus 92 -hpM~-----------------------------~l~~~v~~l~~------~~~~~~~--~-~~~~~~a~~Lia~~p~i~ 132 (378)
T 1vgm_A 92 -DAIG-----------------------------MMETAFGILAS------IYDPKWN--R-ATNKELAVQIIAKTATIT 132 (378)
T ss_dssp -CHHH-----------------------------HHHHHHHHHHH------HHCCCCC--T-TTHHHHHHHHHHHHHHHH
T ss_pred -CcHH-----------------------------HHHHHHHHHhc------cCCccCC--H-HHHHHHHHHHHHHHHHHH
Confidence 3222 22222222221 1121112 2 233567899999999999
Q ss_pred HHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCC
Q 014132 174 HIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGK 253 (430)
Q Consensus 174 a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a 253 (430)
+++|+ ...|++++.+..++ ||+++++.|++++.|++.++++||++||||||||+|+|| |++|+++||++
T Consensus 133 a~~y~--~~~g~~~i~p~~~l--------s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St-~aaRv~aSt~~ 201 (378)
T 1vgm_A 133 ANIYR--AKEGLKPKIPEPSE--------SYAESFLAATFGKKPTQEEIKAMDASLILYTDHEVPAST-TAALVASSTLS 201 (378)
T ss_dssp HHHHH--HHTTCCCCCCCCCS--------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHH-HHHHHHHTTTC
T ss_pred HHHHH--HhCCCCCCCCCCCC--------CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCchHH-HHHHHHHhcCC
Confidence 99999 44577777666665 455555555588888999999999999999999999999 99999999999
Q ss_pred ChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHH-HcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 014132 254 DLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIKRGDNRDKRVELLQKFART 331 (430)
Q Consensus 254 ~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~-~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~ 331 (430)
|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.+ +++++|||||||||+ +.|||+++|++++++
T Consensus 202 d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvyk--~~DPRa~~L~~~a~~ 278 (378)
T 1vgm_A 202 DMYSCIVAALAALKGPLHGGAAEEAFKQFVEIGSV-ENADKWFEEKIIKGKSRLMGFGHRVYK--TYDPRAKIFKTLAKS 278 (378)
T ss_dssp CHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHCSG-GGHHHHHHHHTTTSCCCCTTBCCSSCS--SCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhccCCCCCChHHHHHHHHHHhCCH-hHHHHHHHHHHHhcCCcccCCCCcccC--CCCCchHHHHHHHHH
Confidence 9999999999998 999999999999999999765 58999999999 999999999999997 479999999999999
Q ss_pred hC---C-CChHHHHHHHHHHHHhh--ccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhh
Q 014132 332 HF---P-SVKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLI 405 (430)
Q Consensus 332 ~~---~-~~~~~~~a~~~e~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~Gwi 405 (430)
+. + .+++++++.++|+++.+ +.|+++||||||+|+++++||||.++||+ +|++||++||+
T Consensus 279 l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~--------------lFaisR~~Gw~ 344 (378)
T 1vgm_A 279 FAEKNENVKKYYEIAERIEKLGVDTFGSKHIYPNTDFYSGIVFYALGFPIYMFTS--------------LFALSRVLGWL 344 (378)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCBCTTTTHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHhCCCHHhhhH--------------HHHHHhhccHH
Confidence 83 3 46899999999999865 26899999999999999999999999998 99999999999
Q ss_pred hhHHHhhhhcCCCCCC
Q 014132 406 GHTFDQKRLKQPLYRH 421 (430)
Q Consensus 406 AH~~Eq~~~~~P~~r~ 421 (430)
|||+||+..+.++.||
T Consensus 345 AH~~Eq~~~~~~i~RP 360 (378)
T 1vgm_A 345 AHIIEYVEEQHRLIRP 360 (378)
T ss_dssp HHHHHHHHHSCCCCCC
T ss_pred HHHHHHHhccCCccCc
Confidence 9999999873467776
No 6
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=6.4e-59 Score=470.12 Aligned_cols=328 Identities=18% Similarity=0.265 Sum_probs=254.0
Q ss_pred eeEEEEecC-CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccc
Q 014132 16 IYEGIAIGG-DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQ 92 (430)
Q Consensus 16 ~S~~i~~Gg-d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~ 92 (430)
+|..-+-.| =.|.|.++.|+.+. ..-+++-..+++||.|..+|.+. .+.++ .+..+.+++.++.+. |...
T Consensus 15 Is~id~~~G~L~YRGy~i~dLa~~-~~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~~~~-----p~~~- 87 (363)
T 2c6x_A 15 ISHIDGEKGRLIYRGHHAKDIALN-HSFEEAAYLILFGKLPSTEELQVFKDKLAAERNLPEHIERLIQSL-----PNNM- 87 (363)
T ss_dssp SEEEETTTTEEEETTEEHHHHHHH-SCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSCCHHHHHHHHHS-----CSSS-
T ss_pred CeEEECCCCEEEEcCccHHHHHcc-CCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHHHhC-----cccC-
Confidence 344444433 56899999999985 34556667788999998776543 22222 222233333322111 1111
Q ss_pred cccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhH
Q 014132 93 FGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAP 172 (430)
Q Consensus 93 ~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i 172 (430)
|... ++..+-..+ +. |+. + + ....+++++|+||+|+|
T Consensus 88 --hpM~-----------------------------~l~~~v~~l------~~--~~~-~--~-~~~~~~a~~Lia~~p~i 124 (363)
T 2c6x_A 88 --DDMS-----------------------------VLRTVVSAL------GE--NTY-T--F-HPKTEEAIRLIAITPSI 124 (363)
T ss_dssp --CHHH-----------------------------HHHHHHHHH------CC--SSC-C--S-SCCHHHHHHHHHHHHHH
T ss_pred --CchH-----------------------------HHHHHHHhh------cC--CCC-C--h-HHHHHHHHHHHHHHHHH
Confidence 2221 111111111 11 111 1 2 12356789999999999
Q ss_pred HHHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccC
Q 014132 173 THIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAG 252 (430)
Q Consensus 173 ~a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~ 252 (430)
++++|+. ..|++++.+..++++ +++++.|++++.|++.++++||++||||||||+|+|| |++|+++||+
T Consensus 125 ~a~~~~~--~~g~~~i~p~~~ls~--------a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St-~aarv~aSt~ 193 (363)
T 2c6x_A 125 IAYRKRW--TRGEQAIAPSSQYGH--------VENYYYMLTGEQPSEAKKKALETYMILATEHGMNAST-FSARVTLSTE 193 (363)
T ss_dssp HHHHHHH--HTTCCCCCCCTTSCS--------HHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCSSCHHH-HHHHHHHTTT
T ss_pred HHHHHHH--hcCCCCcCCCCCCCH--------HHHHHHHHcCCCCCHHHHHHHHHHHHHhccCCCcHHH-HHHHHHHhcC
Confidence 9999994 457777777766654 4544455578888999999999999999999999999 9999999999
Q ss_pred CChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 014132 253 KDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFART 331 (430)
Q Consensus 253 a~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~ 331 (430)
+|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||||+ +.|||+++|++++++
T Consensus 194 ~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk--~~DPRa~~l~~~a~~ 270 (363)
T 2c6x_A 194 SDLVSAVTAALGTMKGPLHGGAPSAVTKMLEDIGEK-EHAEAYLKEKLEKGERLMGFGHRVYK--TKDPRAEALRQKAEE 270 (363)
T ss_dssp CCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHTCCSS-TTHHHHHHHHHHTTCCCTTBCCSSCS--SCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHcccCccCCchHHHHHHHHHhCCh-hhHHHHHHHHHHcCCcccCCCCcccC--CCCCcHHHHHHHHHH
Confidence 99999999999998 999999999999999999765 68999999999999999999999997 479999999999999
Q ss_pred hCCCChHHHHHHHHHHHHhhc------cCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhh
Q 014132 332 HFPSVKYMEYAVQVETYTLSK------ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLI 405 (430)
Q Consensus 332 ~~~~~~~~~~a~~~e~~~~~~------~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~Gwi 405 (430)
+.+.+++++++.++|+++.++ .|+++||||||+|+++++||||.++||+ ||++||++||+
T Consensus 271 ~~~~~~~~~~a~~le~~~~~~~g~yf~~k~l~pNVD~~sg~i~~~lG~p~~~~t~--------------lF~i~R~~Gw~ 336 (363)
T 2c6x_A 271 VAGNDRDLDLALHVEAEAIRLLEIYKPGRKLYTNVEFYAAAVMRAIDFDDELFTP--------------TFSASRMVGWC 336 (363)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHSCSSCCCBCTHHHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHhhccccccCCCCcChHHHHHHHHHHhCCChhhhhh--------------hhHHhccccHH
Confidence 866889999999999998653 3899999999999999999999999998 99999999999
Q ss_pred hhHHHhhhhcCCCCCCC
Q 014132 406 GHTFDQKRLKQPLYRHP 422 (430)
Q Consensus 406 AH~~Eq~~~~~P~~r~~ 422 (430)
|||+||+..+ +|.||.
T Consensus 337 AH~~Eq~~~~-~i~RP~ 352 (363)
T 2c6x_A 337 AHVLEQAENN-MIFRPS 352 (363)
T ss_dssp HHHHHHTTTC-CCCCCE
T ss_pred HHHHHHHHcC-CccCCc
Confidence 9999999765 788873
No 7
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-59 Score=476.33 Aligned_cols=320 Identities=18% Similarity=0.235 Sum_probs=250.3
Q ss_pred CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHHc-CCCCCCEEEEecCCcccccccccccccccccccC
Q 014132 25 DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALKQ-GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGG 102 (430)
Q Consensus 25 d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~~-~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~~~ 102 (430)
=.|+|.++.|+.+.. .-+++-..+++||.|..+|.+. .+-+++ +..+..|..++
T Consensus 73 L~YRGy~I~dLa~~~-~fEevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i----------------------- 128 (414)
T 3hwk_A 73 LTYRGYPVQDLAARC-SFEQVAFLLWRGELPTDAELALFSQRERASRRVDRSMLSLL----------------------- 128 (414)
T ss_dssp EEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHH-----------------------
T ss_pred EEECCeEHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHH-----------------------
Confidence 568999999998742 2345666688999998766543 222221 11222222222
Q ss_pred CcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHHHHHHhhccC
Q 014132 103 EMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDD 182 (430)
Q Consensus 103 ~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~a~~~~i~~~ 182 (430)
... +.-.+|=+.+..+-.++ +.++|..++ + ....+++++|+||+|+|++++|+ ..
T Consensus 129 ------------~~~--p~~~hPM~~l~~~vsaL------~~~~~~~~~--~-~~~~~~a~rLiAk~pti~a~~yr--~~ 183 (414)
T 3hwk_A 129 ------------AKL--PDNCHPMDVVRTAISYL------GAEDPDEDD--A-AANRAKAMRMMAVLPTIVAIDMR--RR 183 (414)
T ss_dssp ------------HHS--CTTSCHHHHHHHHHHHH------HHTCTTTTC--G-GGHHHHHHHHHHHHHHHHHHHHH--HH
T ss_pred ------------HhC--CCCCCHHHHHHHHHHHH------hhcCCcccC--H-HHHHHHHHHHHHHHHHHHHHHHH--Hh
Confidence 111 11112222222222222 223344333 2 23456889999999999999999 45
Q ss_pred CCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHHHHHHh
Q 014132 183 RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSG 262 (430)
Q Consensus 183 ~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~av~Ag 262 (430)
.|.+++.+..++++ .+||++|+ ++++|++.++++||++||||||||+|+|| |++|+++||++|+|+|++||
T Consensus 184 ~g~~~~~p~~~ls~-------a~nfl~ml-~g~~p~~~~~~~ld~~LiLhADHe~NaST-~taRvvaSt~ad~ysavaag 254 (414)
T 3hwk_A 184 RGLPPIAPHSGLGY-------AQNFLHMC-FGEVPETAVVSAFEQSMILYAEHGFNAST-FAARVVTSTQSDIYSAVTGA 254 (414)
T ss_dssp TTCCCCCCCTTSCH-------HHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCCSSCHHH-HHHHHHHTTTCCHHHHHHHH
T ss_pred CCCCCCCCCccccH-------HHHHHHHh-cCCCCCHHHHHHHHHHHhhccCCCCChHH-HHHHHHHhcCCCHHHHHHHH
Confidence 78888888877755 45555554 88889999999999999999999999999 99999999999999999999
Q ss_pred hhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh---CCCChH
Q 014132 263 LLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTH---FPSVKY 338 (430)
Q Consensus 263 l~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~~---~~~~~~ 338 (430)
++++ ||+|||||++|++||+++.+. +++++||++.++++++|||||||||+ +.|||+++|+++++++ ...+++
T Consensus 255 i~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~I~GFGHrVyk--~~DPRa~~L~~~a~~l~~~~g~~~~ 331 (414)
T 3hwk_A 255 IGALKGRLHGGANEAVMHDMIEIGDP-ANAREWLRAKLARKEKIMGFGHRVYR--HGDSRVPTMKRALERVGTVRDGQRW 331 (414)
T ss_dssp HHHHTSTTTTHHHHHHHHHHHHHCSG-GGHHHHHHHHHHTTCCCTTBCCSSCS--SCCTTHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHhcCCccCChHHHHHHHHHHhCCc-hHHHHHHHHHHhcCCCccCCCCCCCC--CCCccHHHHHHHHHHHHHhcCCCHH
Confidence 9998 999999999999999999876 58999999999999999999999997 4799999999999875 356799
Q ss_pred HHHHHHHHHHHhhccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhhHHHhhhhcCCC
Q 014132 339 MEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPL 418 (430)
Q Consensus 339 ~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH~~Eq~~~~~P~ 418 (430)
++++.++|+++.+ .|+++||||||+|+++.+||||.++||+ ||++||++||+|||+||++. .+|
T Consensus 332 ~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~--------------lFaisR~~Gw~AH~~Eq~~~-~ri 395 (414)
T 3hwk_A 332 LDIYQVLAAEMAS-ATGILPNLDFPTGPAYYLMGFDIASFTP--------------IFVMSRITGWTAHIMEQATA-NAL 395 (414)
T ss_dssp HHHHHHHHHHHHH-HHCCCBCTHHHHHHHHHHHTCCGGGHHH--------------HHHHHHHHHHHHHHHHHHHS-CCC
T ss_pred HHHHHHHHHHHHH-hcCCCCchHHHHHHHHHHhCCCHHHHHH--------------HHHHHhHHHHHHHHHHHHhc-CCC
Confidence 9999999999876 5899999999999999999999999998 99999999999999999954 366
Q ss_pred CCC
Q 014132 419 YRH 421 (430)
Q Consensus 419 ~r~ 421 (430)
.||
T Consensus 396 iRP 398 (414)
T 3hwk_A 396 IRP 398 (414)
T ss_dssp CCC
T ss_pred cCC
Confidence 666
No 8
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=2.2e-58 Score=468.69 Aligned_cols=330 Identities=20% Similarity=0.240 Sum_probs=254.6
Q ss_pred eEEEEecC-CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHHc-CCCCCCEEEEecCCccccccccccc
Q 014132 17 YEGIAIGG-DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALKQ-GKVNKPVVAWVSGTCARLFKSEVQF 93 (430)
Q Consensus 17 S~~i~~Gg-d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~~-~~~~KPvv~~~~G~~~~~~p~g~~~ 93 (430)
|..-+-.| =.|.|.++.|+.+. ..-+++-..+++||.|..+|.+. .+.++. +..+.+++.
T Consensus 19 s~id~~~G~L~YRGy~i~dLa~~-~~feeva~LL~~G~lPt~~el~~f~~~l~~~~~lp~~~~~---------------- 81 (377)
T 1o7x_A 19 TFIDGEKGILRYRGYNIEDLVNY-GSYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLD---------------- 81 (377)
T ss_dssp EEEETTTTEEEETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHH----------------
T ss_pred eEEECCCCEEEECCccHHHHHcC-CCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHH----------------
Confidence 44444333 56899999999985 34556667788899998776543 222221 111222222
Q ss_pred ccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHH
Q 014132 94 GHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPT 173 (430)
Q Consensus 94 gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~ 173 (430)
.++. .+.-.+|=+++..+-..+.. ++|..++ + ....+++++|+||+|+|+
T Consensus 82 -------------------~~~~--~p~~~hpM~~l~~~v~~l~~------~~~~~~~--~-~~~~~~a~~Lia~~p~i~ 131 (377)
T 1o7x_A 82 -------------------TIYL--MPKEADAIGLLEVGTAALAS------IDKNFKW--K-ENDKEKAISIIAKMATLV 131 (377)
T ss_dssp -------------------HHHH--SCTTSCHHHHHHHHHHHHHH------HCCCCCS--S-SSHHHHHHHHHHHHHHHH
T ss_pred -------------------HHHh--CcccCCcHHHHHHHHHHHhh------cCCCcCC--H-HHHHHHHHHHHHHHHHHH
Confidence 2221 11222222222222222222 2333221 2 344568899999999999
Q ss_pred HHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCC
Q 014132 174 HIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGK 253 (430)
Q Consensus 174 a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a 253 (430)
+++|+ ...|++++.+..+++ ++++++.|++++.|++.++++||++||||||||+|+|| |++|+++||++
T Consensus 132 a~~y~--~~~g~~~i~p~~~ls--------~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St-~aaRv~aSt~a 200 (377)
T 1o7x_A 132 ANVYR--RKEGNKPRIPEPSDS--------FAKSFLLASFAREPTTDEINAMDKALILYTDHEVPAST-TAALVAASTLS 200 (377)
T ss_dssp HHHHH--HHTTCCCCCCCCCSC--------HHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSCCHHH-HHHHHHHHTTC
T ss_pred HHHHH--HhcCCCCCCCCCCCC--------HHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCChHH-HHHHHHHhcCC
Confidence 99999 445777777776664 45545555588889999999999999999999999999 99999999999
Q ss_pred ChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHH-HcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 014132 254 DLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIKRGDNRDKRVELLQKFART 331 (430)
Q Consensus 254 ~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~-~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~ 331 (430)
|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.+ +++++|||||||||+ +.|||+++|++++++
T Consensus 201 d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvyk--~~DPRa~~l~~~a~~ 277 (377)
T 1o7x_A 201 DMYSSLTAALAALKGPLHGGAAEEAFKQFIEIGDP-NRVQNWFNDKVVNQKNRLMGFGHRVYK--TYDPRAKIFKKLALT 277 (377)
T ss_dssp CHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHTTTTCCCCTTBCCSSCS--SCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHhcCCcccCCCccccC--CCCCchHHHHHHHHH
Confidence 9999999999998 999999999999999999765 68999999999 999999999999997 479999999999999
Q ss_pred hC---CC-ChHHHHHHHHHHHHhh--ccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhh
Q 014132 332 HF---PS-VKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLI 405 (430)
Q Consensus 332 ~~---~~-~~~~~~a~~~e~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~Gwi 405 (430)
+. +. +++++++.++|+++.+ +.|+++||||||+|+++++||||.++||+ ||++||++||+
T Consensus 278 l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~v~~~lG~p~~~~t~--------------lF~i~R~~Gw~ 343 (377)
T 1o7x_A 278 LIERNADARRYFEIAQKLEELGIKQFSSKGIYPNTDFYSGIVFYALGFPVYMFTA--------------LFALSRTLGWL 343 (377)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHTTTTCCBCTTTTHHHHHHHHTCCGGGHHH--------------HHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHhCCChhhhhh--------------HHHHhhhccHH
Confidence 83 34 6899999999999865 26899999999999999999999999998 99999999999
Q ss_pred hhHHHhhhhcCCCCCC
Q 014132 406 GHTFDQKRLKQPLYRH 421 (430)
Q Consensus 406 AH~~Eq~~~~~P~~r~ 421 (430)
|||+||+..+.++.||
T Consensus 344 AH~~Eq~~~~~~i~RP 359 (377)
T 1o7x_A 344 AHIIEYVEEQHRLIRP 359 (377)
T ss_dssp HHHHHHHHHSCCCCCC
T ss_pred HHHHHHHhccCCccCC
Confidence 9999999873467776
No 9
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=4.3e-58 Score=466.46 Aligned_cols=333 Identities=20% Similarity=0.237 Sum_probs=254.7
Q ss_pred eeEEEEecC-CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccc
Q 014132 16 IYEGIAIGG-DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQ 92 (430)
Q Consensus 16 ~S~~i~~Gg-d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~ 92 (430)
+|..-+-.| =.|.|.++.|+.+. ..-+++-..+++||.|..+|.+. .+.++ .+..+.+++.++.+. |...
T Consensus 17 Is~id~~~G~L~YRGy~i~dLa~~-~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~~~~-----p~~~- 89 (377)
T 1iom_A 17 MCYIDGQQGKLYYYGIPIQELAEK-SSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRY-----PVSA- 89 (377)
T ss_dssp SEEEETTTTEEEETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHHTTS-----CTTS-
T ss_pred CeEEECCCCEEEEcCeeHHHHHcc-CCHHHHHHHHHCCCCcCHHHHHHHHHHHHHcCCCCHHHHHHHHhC-----CcCC-
Confidence 455544433 56999999999985 34556777788999999776543 22222 222233333322221 1111
Q ss_pred cccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhH
Q 014132 93 FGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAP 172 (430)
Q Consensus 93 ~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i 172 (430)
|.. +++..+-..+.. ++|...+.++ ....+++++|+||+|+|
T Consensus 90 --hpM-----------------------------~~l~~~v~~l~~------~~~~~~~~~~-~~~~~~a~~Lia~~p~i 131 (377)
T 1iom_A 90 --HPM-----------------------------SFLRTAVSEFGM------LDPTEGDISR-EALYEKGLDLIAKFATI 131 (377)
T ss_dssp --CHH-----------------------------HHHHHHHHHHHH------TCTTTTCCSH-HHHHHHHHHHHHHHHHH
T ss_pred --Cch-----------------------------hHHHHHHHHHhc------cCCCcccCCH-HHHHHHHHHHHHHHHHH
Confidence 222 222222222221 2332222222 22346789999999999
Q ss_pred HHHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccC
Q 014132 173 THIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAG 252 (430)
Q Consensus 173 ~a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~ 252 (430)
++++|+. ..|++++.+..++ ||++++++|++|++|++.++++||++||||||||+|+|| |++|+++||+
T Consensus 132 ~a~~y~~--~~g~~~i~p~~~l--------s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St-~aaRv~aSt~ 200 (377)
T 1iom_A 132 VAANKRL--KEGKEPIPPREDL--------SHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNAST-FTAIAAFSTE 200 (377)
T ss_dssp HHHHHHH--HTTCCCCCCCTTS--------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHH-HHHHHHHTTT
T ss_pred HHHHHHH--HcCCCCCCCCCCC--------CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCchH-HHHHHHhhcC
Confidence 9999994 4577777676665 455555555588889999999999999999999999999 9999999999
Q ss_pred CChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 014132 253 KDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFART 331 (430)
Q Consensus 253 a~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~ 331 (430)
+|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||||+ +.|||+++|++++++
T Consensus 201 ~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk--~~DPRa~~L~~~~~~ 277 (377)
T 1iom_A 201 TDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTP-ERAREWVREKLAKKERIMGMGHRVYK--AFDPRAGVLEKLARL 277 (377)
T ss_dssp CCHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHCSH-HHHHHHHHHHHHTTCCCTTBSCSSCS--SCCTTHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcccCccCChhHHHHHHHHHhcCc-hhHHHHHHHHHHCCCcccCCCCcccC--CCCCchHHHHHHHHH
Confidence 99999999999998 999999999999999999865 58999999999999999999999997 479999999999998
Q ss_pred hC---CCChHHHHHHHHHHHHhh-c-cCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhh
Q 014132 332 HF---PSVKYMEYAVQVETYTLS-K-ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIG 406 (430)
Q Consensus 332 ~~---~~~~~~~~a~~~e~~~~~-~-~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiA 406 (430)
+. +.+++++++.++|+++.+ . .|+++||||||+|+++++||||.++||+ ||++||++||+|
T Consensus 278 l~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~i~~~lG~p~~~~t~--------------lF~i~R~~Gw~A 343 (377)
T 1iom_A 278 VAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTP--------------IFAVARISGWVG 343 (377)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHTTTTCCBCHHHHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHcCCCHHhhhh--------------HHHHhccccHHH
Confidence 83 568999999999999865 2 3899999999999999999999999998 999999999999
Q ss_pred hHHHhhhhcCCCCCC
Q 014132 407 HTFDQKRLKQPLYRH 421 (430)
Q Consensus 407 H~~Eq~~~~~P~~r~ 421 (430)
||+||+....++.||
T Consensus 344 H~~Eq~~~~~~i~RP 358 (377)
T 1iom_A 344 HILEYQELDNRLLRP 358 (377)
T ss_dssp HHHHHHHHTCCCCCC
T ss_pred HHHHHHhhcCCcccc
Confidence 999999733355555
No 10
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=2.3e-58 Score=467.58 Aligned_cols=322 Identities=17% Similarity=0.220 Sum_probs=250.5
Q ss_pred CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccccccccccccC
Q 014132 25 DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGG 102 (430)
Q Consensus 25 d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~~~ 102 (430)
=.|.|.++.|+.+. ..-+++-..+++||.|..+|.+. .+.++ .+..+.+++.++
T Consensus 25 L~YRGy~i~~La~~-~~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~----------------------- 80 (371)
T 1aj8_A 25 LYYRGYSVEELAEL-STFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIM----------------------- 80 (371)
T ss_dssp EEETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHH-----------------------
T ss_pred EEEcCccHHHHHcc-CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCCHHHHHHH-----------------------
Confidence 56899999999985 34556667788999999776543 22222 111222222222
Q ss_pred CcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCC-CCCCchhhHHHHHhcchhhHHHHHHhhcc
Q 014132 103 EMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVT-PPQIPEDLNTAIKSGKVRAPTHIISTISD 181 (430)
Q Consensus 103 ~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~-~~~~~~~~~~~~l~ak~p~i~a~~~~i~~ 181 (430)
.. .+.-.+|=+++..+-..+.. ++|..++. ++ ....+++++|+||+|+|++++|+.
T Consensus 81 ------------~~--~p~~~hpM~~l~~~v~~l~~------~~~~~~~~~~~-~~~~~~a~~Lia~~p~i~a~~y~~-- 137 (371)
T 1aj8_A 81 ------------EA--LPKNTHPMGALRTIISYLGN------IDDSGDIPVTP-EEVYRIGISVTAKIPTIVANWYRI-- 137 (371)
T ss_dssp ------------HH--SCTTCCHHHHHHHHHHHHHH------HSTTTTSCCCH-HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ------------Hh--CCCCCChHHHHHHHHHHHhc------cCCcccccCCH-HHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 11 11112222222222222222 22322222 22 233467899999999999999994
Q ss_pred CCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHHHHHH
Q 014132 182 DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVS 261 (430)
Q Consensus 182 ~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~av~A 261 (430)
..|++++.+..++ ||++++++|++++.|++.++++||++||||||||+|+|| |++|+++||++|+|+|++|
T Consensus 138 ~~g~~~i~p~~~l--------s~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St-~aarv~aSt~~d~~savaa 208 (371)
T 1aj8_A 138 KNGLEYVPPKEKL--------SHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINAST-LAVMTVGSTLSDYYSAILA 208 (371)
T ss_dssp HTTCCCCCCCTTS--------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHH-HHHHHHHTTTCCHHHHHHH
T ss_pred HcCCCCCCCCCCC--------CHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCCCChhH-HHHHHHhhcCCcHHHHHHH
Confidence 4577777666665 455555556588889999999999999999999999999 9999999999999999999
Q ss_pred hhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhCCCChHHH
Q 014132 262 GLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYME 340 (430)
Q Consensus 262 gl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~~~~~~~~~~ 340 (430)
|++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||||+ +.|||+++|+++++++ +.+++++
T Consensus 209 gi~aL~GplHGGAne~v~~~l~~i~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk--~~DPRa~~l~~~~~~~-~~~~~~~ 284 (371)
T 1aj8_A 209 GIGALKGPIHGGAVEEAIKQFMEIGSP-EKVEEWFFKALQQKRKIMGAGHRVYK--TYDPRARIFKKYASKL-GDKKLFE 284 (371)
T ss_dssp HHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHHHTCCCTTBCCSSCS--SCCHHHHHHHHHHHHH-SCHHHHH
T ss_pred HHHHcCCCccCCchHHHHHHHHHhcCc-hhHHHHHHHHHHcCCeeecCCccccC--CCCccHHHHHHHHHHc-CCCHHHH
Confidence 99999 999999999999999999876 58999999999999999999999997 4799999999999998 4688999
Q ss_pred HHHHHHHHHhhc--cCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhhHHHhhhhcCCC
Q 014132 341 YAVQVETYTLSK--ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPL 418 (430)
Q Consensus 341 ~a~~~e~~~~~~--~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH~~Eq~~~~~P~ 418 (430)
++.++|+++.+. .|+++||||||+|+++++||||.++||+ ||++||++||+|||+||++.+ ++
T Consensus 285 ~a~~le~~~~~~~~~k~l~pNVD~~sg~i~~~lGip~~~~t~--------------lF~i~R~~Gw~AH~~Eq~~~~-~i 349 (371)
T 1aj8_A 285 IAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIPIELYTT--------------IFAMGRIAGWTAHLAEYVSHN-RI 349 (371)
T ss_dssp HHHHHHHHHHHHTTTTTCCBCTTTTHHHHHHTTTCCGGGHHH--------------HHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHHHHcCCCHHhhhh--------------HHHHhccccHHHHHHHHHhcC-Cc
Confidence 999999998653 4899999999999999999999999988 999999999999999999655 45
Q ss_pred CCC
Q 014132 419 YRH 421 (430)
Q Consensus 419 ~r~ 421 (430)
.||
T Consensus 350 ~RP 352 (371)
T 1aj8_A 350 IRP 352 (371)
T ss_dssp CCC
T ss_pred cCc
Confidence 565
No 11
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=3.2e-59 Score=481.92 Aligned_cols=237 Identities=21% Similarity=0.241 Sum_probs=209.4
Q ss_pred hhHHHHHhcchhhHHHHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccC-CC
Q 014132 159 DLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH-GP 237 (430)
Q Consensus 159 ~~~~~~l~ak~p~i~a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDH-g~ 237 (430)
.+++++|+||+|+|++++|+.....|..++++..++++ .+||++|+ ++ |++.+.++||++||||||| |+
T Consensus 170 ~~~a~~LiAk~p~iaa~~yr~~~~~~~~~i~p~~~ls~-------a~nfl~ml-~~--p~~~~~~~ld~~LiLhADHeg~ 239 (435)
T 1csh_A 170 YEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDW-------SHNFTNML-GY--TDPQFTELMRLYLTIHSDHEGG 239 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCTTSCH-------HHHHHHHH-TC--CCHHHHHHHHHHHHHTSCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCCCH-------HHHHHHHh-cC--CChHHHHHHHHHHHHccCCCCC
Confidence 45789999999999999999654444356677777766 56666665 55 7888999999999999999 79
Q ss_pred CCcchhHHHHhhccCCChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhc------cCCCHHHHHHHHHHcCCCCCCCCC
Q 014132 238 CVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYD------RGLSAYEFVESMKKKGIRVPGIGH 310 (430)
Q Consensus 238 ~~St~~aar~~aSt~a~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~------~~~~~~~~v~~~~~~~~~ipGFGH 310 (430)
|+|| |++|+++||++|+|+|++||++++ ||+|||||++|++||+++.+ ..++++++|++.+++|++||||||
T Consensus 240 N~ST-ftaRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGH 318 (435)
T 1csh_A 240 NVSA-HTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGH 318 (435)
T ss_dssp SHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred chHH-HHHHHHHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecCCc
Confidence 9999 999999999999999999999998 99999999999999987642 135789999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhh------ccCCcccchhhHHHHHHHHhcc-CCCCCchhhh
Q 014132 311 RIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLS------KANNLVLNVDGAIGSLFLDLLA-GSGMFSKQEI 383 (430)
Q Consensus 311 ~vy~~~~~DPRa~~L~~~~~~~~~~~~~~~~a~~~e~~~~~------~~~~l~~Nvd~~~a~l~~~lG~-~~~~ft~~e~ 383 (430)
|||+ +.|||+++|+++++++.+.+++++++.++|+++.+ +.|+++||||||+|+++++||| |.++||+
T Consensus 319 rVyk--~~DPRa~~L~~~a~~l~~~~~~~~~a~~le~~a~~~l~~~~~~k~l~pNVDf~sg~i~~~lGipp~~~ft~--- 393 (435)
T 1csh_A 319 AVLR--KTDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTV--- 393 (435)
T ss_dssp SSCC--SCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCCGGGHHH---
T ss_pred cccC--CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHcCCChhhcccc---
Confidence 9997 47999999999999997788999999999988632 3589999999999999999999 6889988
Q ss_pred HHHHhhhhcchhhhhhhhhhhhhhHHHhhhhcCCCCCCC
Q 014132 384 DEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 422 (430)
Q Consensus 384 ~~~~p~~~~~~lf~~~R~~GwiAH~~Eq~~~~~P~~r~~ 422 (430)
||++||++||+||++||+..++||.||.
T Consensus 394 -----------lFaisR~~Gw~AH~~Eq~~~~~~I~RP~ 421 (435)
T 1csh_A 394 -----------LFGVSRALGVLAQLIWSRALGFPLERPK 421 (435)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred -----------hhhhhhhHHHHHHHHHHHhcCCCCcCcH
Confidence 9999999999999999998887888884
No 12
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=3.5e-59 Score=473.23 Aligned_cols=321 Identities=15% Similarity=0.177 Sum_probs=248.1
Q ss_pred cCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHHc-CCCCCCEEEEecCCcccccccccccccccccc
Q 014132 23 GGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALKQ-GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKS 100 (430)
Q Consensus 23 Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~~-~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~ 100 (430)
|+=.|.|.++.|+.+.. .-+++-..+++||.|..+|.+. .+-++. +..+..|..++.+.
T Consensus 29 g~L~YRGy~I~dLa~~~-~feev~yLLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~~~~------------------ 89 (375)
T 3tqg_A 29 HGLTYRGYRIEDLAANA-TFEEVAYLLLKNKLPTKSELDAYTKKLVNLRSLPPALKDTLERI------------------ 89 (375)
T ss_dssp CCEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHHHTS------------------
T ss_pred CEEEECCeeHHHHHhcC-CHHHHHHHHHcCcCcCHHHHHHHHHHHHHccCCCHHHHHHHHhC------------------
Confidence 45678999999988742 3355666789999998776543 223332 11222222222111
Q ss_pred cCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHHHHHHhhc
Q 014132 101 GGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180 (430)
Q Consensus 101 ~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~a~~~~i~ 180 (430)
+.-.+|=+++..+-..|. .++|..+ + ....+++++|+||+|+|++++|++
T Consensus 90 -------------------p~~~hpM~~l~~~v~aL~------~~~~~~~---~-~~~~~~a~~LiAk~p~i~a~~yr~- 139 (375)
T 3tqg_A 90 -------------------PASSHPMDVMRTGCSMLG------NLEPENG---F-ENEQNIADRLVAIFPAIQCYWYHY- 139 (375)
T ss_dssp -------------------CTTSCHHHHHHHHHHHHH------HHSCCCS---G-GGHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred -------------------CCCCChHHHHHHHHHHHH------hcCCCCC---h-HHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 111222222222222222 1222221 1 233467899999999999999994
Q ss_pred cCCCCcccccCCC-cchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHHHH
Q 014132 181 DDRGEEPCYAGVP-MSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSL 259 (430)
Q Consensus 181 ~~~g~~~~~~g~d-l~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~av 259 (430)
..|++++.+..+ ++ |+++++.|+++++|++.++++||++||||||||+|+|| |++|+++||++|+|+|+
T Consensus 140 -~~g~~~i~p~~~~ls--------~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe~n~St-~tarvvaSt~ad~ysav 209 (375)
T 3tqg_A 140 -SHHGKRIDTELDDLT--------LAGYFLHLLLGKKAAQMAIDCMNASLILYAEHEFNAST-FAARVCSATLSDIYSAV 209 (375)
T ss_dssp -HHHCCCCCCCCCCSS--------HHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHH-HHHHHHHTTTCCHHHHH
T ss_pred -hcCCCCcCCCCcccc--------HHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCHHH-HHHHHHHccCCCHHHHH
Confidence 456666766665 64 45544455588889999999999999999999999999 99999999999999999
Q ss_pred HHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhC---CC
Q 014132 260 VSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHF---PS 335 (430)
Q Consensus 260 ~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~~~---~~ 335 (430)
+||++++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||||+ +.|||+++|+++++++. ..
T Consensus 210 aagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~~~~~~~i~GfGHrVyk--~~DPRa~~l~~~a~~l~~~~~~ 286 (375)
T 3tqg_A 210 TAAIATLRGPLHGGANEAAMDLIMLYKTP-SEAIAGIKRKLANKELIMGFGHAVYR--ERDPRNAIIKSWAQKLAPNAAD 286 (375)
T ss_dssp HHHHHHHTSHHHHCHHHHHHHHHTTCSSH-HHHHHHHHHHHHTCCCCTTBCCSSCS--SCCHHHHHHHHHHHHHTTTSTT
T ss_pred HHHHHhccCcccCCHHHHHHHHHHHhcCh-hHHHHHHHHHHhcCCCccCCCCCCCC--CCCccHHHHHHHHHHHHHhcCC
Confidence 9999998 999999999999999998765 58999999999999999999999997 47999999999999984 46
Q ss_pred ChHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhhHHHhhhhc
Q 014132 336 VKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLK 415 (430)
Q Consensus 336 ~~~~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH~~Eq~~~~ 415 (430)
+++++++.++|+++.+ .|+++||||||+|+++++||||.++||+ +|++||++||+|||+||+..+
T Consensus 287 ~~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~--------------lFa~sR~~Gw~AH~~Eq~~~~ 351 (375)
T 3tqg_A 287 GYLFDISDAIENTMQD-EKKLFPNLDFYSATAYHFLNIPTKLFTP--------------IFVMSRVTGWCAHIFEQRKDN 351 (375)
T ss_dssp THHHHHHHHHHHHHHH-HHCCCBCHHHHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHH-hcCCCCChHHHHHHHHHHcCCCHHHHHH--------------HHHHHhHHHHHHHHHHHHhcC
Confidence 8999999999999865 5899999999999999999999999998 999999999999999998654
Q ss_pred CCCCCC
Q 014132 416 QPLYRH 421 (430)
Q Consensus 416 ~P~~r~ 421 (430)
+ +.||
T Consensus 352 ~-iiRP 356 (375)
T 3tqg_A 352 R-IIRP 356 (375)
T ss_dssp C-CCCC
T ss_pred C-CCCC
Confidence 3 4455
No 13
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.6e-58 Score=467.78 Aligned_cols=323 Identities=19% Similarity=0.245 Sum_probs=249.4
Q ss_pred eeEEEEecC-CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccc
Q 014132 16 IYEGIAIGG-DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQ 92 (430)
Q Consensus 16 ~S~~i~~Gg-d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~ 92 (430)
+|..-+-.| =.|.|.++.|+.+. ..-+++-..+++||.|..+|.+. .+.++ .+..+.+++.++
T Consensus 17 Is~id~~~G~L~YRGy~i~~La~~-~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~------------- 82 (373)
T 1vgp_A 17 ITYIDGELGRLYYRGYSIYDLAEF-SNFEEVSYLILYGKLPNREELNWFQEKLREERYLPDFIIKFL------------- 82 (373)
T ss_dssp SEEEETTTTEEEETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHH-------------
T ss_pred CeEEECCCCEEEEcCeeHHHHHcc-CCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHH-------------
Confidence 344444433 56899999999985 34556677788999999776543 22222 211222222222
Q ss_pred cccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhH
Q 014132 93 FGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAP 172 (430)
Q Consensus 93 ~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i 172 (430)
.. .+.-.+|=+++..+-..+.. ++| .+ + ....+++++|+||+|+|
T Consensus 83 ----------------------~~--~p~~~hpM~~l~~~v~~l~~------~~~-~~---~-~~~~~~a~~Lia~~p~i 127 (373)
T 1vgp_A 83 ----------------------RE--VRKDAQPMDILRTAVSLLGI------EDS-KN---D-ERTDIKGIKLISKFPTI 127 (373)
T ss_dssp ----------------------HH--SCTTSCHHHHHHHHHHHHHH------HCC-CC---S-SCHHHHHHHHHHHHHHH
T ss_pred ----------------------Hh--CCCCCChHHHHHHHHHHHhc------cCC-CC---h-HHHHHHHHHHHHHHHHH
Confidence 11 11112222222222222222 223 11 2 23356789999999999
Q ss_pred HHHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccC
Q 014132 173 THIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAG 252 (430)
Q Consensus 173 ~a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~ 252 (430)
++++|+ ...|++++.+..++ ||+++++.|+++++|++.++++||++||||||||+|+|| |++|+++||+
T Consensus 128 ~a~~y~--~~~g~~~i~p~~~l--------s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~ST-~aaRv~aSt~ 196 (373)
T 1vgp_A 128 VANYAR--LRKGLDIIEPDPKL--------SHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHEMNAST-FASLVVASTF 196 (373)
T ss_dssp HHHHHH--HHTTCCCCCCCTTS--------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCSCCHHH-HHHHHHHTTT
T ss_pred HHHHHH--HhcCCCCCCCCCCC--------CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCchHH-HHHHHHHhcC
Confidence 999999 44577777666665 455555555588889999999999999999999999999 9999999999
Q ss_pred CChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 014132 253 KDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFART 331 (430)
Q Consensus 253 a~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~ 331 (430)
+|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||||+ +.|||+++|++++++
T Consensus 197 ad~~savaagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~i~~~l~~~~~i~GfGHrvyk--~~DPRa~~L~~~~~~ 273 (373)
T 1vgp_A 197 SDLYSSIVAGISALKGPLHGGANYEALKMFKEIGSP-EKVNDYILNRLSNKQRIMGFGHRVYK--TYDPRARILKQYAKL 273 (373)
T ss_dssp CCHHHHHHHHHHHHTCTTSSSCCCHHHHHHHHSCSS-SSHHHHHHHHHHTTCCCTTBCCSSCS--SCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhcCc-hhHHHHHHHHHHcCCcccCCCccccC--CCCCchHHHHHHHHH
Confidence 99999999999998 999999999999999998766 68999999999999999999999997 479999999999998
Q ss_pred hC---CCC--hHHHHHHHHHHHHhhc--cCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhh
Q 014132 332 HF---PSV--KYMEYAVQVETYTLSK--ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGL 404 (430)
Q Consensus 332 ~~---~~~--~~~~~a~~~e~~~~~~--~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~Gw 404 (430)
+. +.+ ++++++.++|+++.+. .|+++||||||+|+++++||||.++||+ ||++||++||
T Consensus 274 l~~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~--------------lFaisR~~Gw 339 (373)
T 1vgp_A 274 LAEKEGGEIYTLYQIAEKVEEIGIKYLGPKGIYPNVDFFSSIVFYSLGFEPDFFPA--------------VFASARVVGW 339 (373)
T ss_dssp HHHHHCSHHHHHHHHHHHHHHHHHHHHGGGTCCBCHHHHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHH
T ss_pred HHHHcCCcchHHHHHHHHHHHHHHHhcccCCCCCChHHHHHHHHHHcCCCHHhhhh--------------hHHhhccccH
Confidence 83 344 8999999999998653 4899999999999999999999999998 9999999999
Q ss_pred hhhHHHhhhhc
Q 014132 405 IGHTFDQKRLK 415 (430)
Q Consensus 405 iAH~~Eq~~~~ 415 (430)
+|||+||++.+
T Consensus 340 ~AH~~Eq~~~~ 350 (373)
T 1vgp_A 340 VAHIMEYIKDN 350 (373)
T ss_dssp HHHHHHHGGGC
T ss_pred HHHHHHHHhcC
Confidence 99999999654
No 14
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=5.6e-58 Score=466.34 Aligned_cols=332 Identities=17% Similarity=0.164 Sum_probs=253.6
Q ss_pred eeEEEEecC-CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHHc-CCCCCCEEEEecCCcccccccccc
Q 014132 16 IYEGIAIGG-DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALKQ-GKVNKPVVAWVSGTCARLFKSEVQ 92 (430)
Q Consensus 16 ~S~~i~~Gg-d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~~-~~~~KPvv~~~~G~~~~~~p~g~~ 92 (430)
+|..-+-.| =.|+|.++.|+.+. ..-+++-..+++||.|..+|.+. .+.++. +..+.+++.++.+
T Consensus 19 Is~id~~~G~L~YRGy~i~dLa~~-~~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~~~----------- 86 (378)
T 1a59_A 19 ISKVNSDTNSLLYRGYPVQELAAK-CSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVKGAIDL----------- 86 (378)
T ss_dssp SEEEETTTTEEEETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHHHHHTT-----------
T ss_pred ceEEECCCCeEEEcCccHHHHHhc-CCHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHh-----------
Confidence 455544433 56999999999985 34556667788999999776543 222221 1122223332211
Q ss_pred cccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhH
Q 014132 93 FGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAP 172 (430)
Q Consensus 93 ~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i 172 (430)
.+.-.+|=+++..+-..+.. ++|..++.++ ....+++++|++|+|+|
T Consensus 87 --------------------------~p~~~hpM~~l~~~v~~l~~------~~~~~~~~~~-~~~~~~a~~Lia~~p~i 133 (378)
T 1a59_A 87 --------------------------LSTACHPMDVARTAVSVLGA------NHARAQDSSP-EANLEKAMSLLATFPSV 133 (378)
T ss_dssp --------------------------SCTTSCHHHHHHHHHHHHHH------TCTTTTCCSH-HHHHHHHHHHHHHHHHH
T ss_pred --------------------------CCCCCCcHHHHHHHHHHHHh------cCCCccCCCH-HHHHHHHHHHHHHHHHH
Confidence 11112222222222222221 2332222222 23346789999999999
Q ss_pred HHHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccC
Q 014132 173 THIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAG 252 (430)
Q Consensus 173 ~a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~ 252 (430)
++++|+. ..|++++.+..++ ||++++++|+++++|++.++++||++||||||||+|+|| |++|+++||+
T Consensus 134 ~a~~y~~--~~g~~~i~p~~~l--------s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St-~aarv~aSt~ 202 (378)
T 1a59_A 134 VAYDQRR--RRGEELIEPREDL--------DYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHSFNAST-FTARVITSTL 202 (378)
T ss_dssp HHHHHHH--HTTCCCCCCCTTS--------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHH-HHHHHHHTTT
T ss_pred HHHHHHH--HcCCCCCCCCCCC--------CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCCCCchH-HHHHHHhhcC
Confidence 9999994 4577776666555 456555555588889999999999999999999999999 9999999999
Q ss_pred CChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccC--------CCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHH
Q 014132 253 KDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRG--------LSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVE 323 (430)
Q Consensus 253 a~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~--------~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~ 323 (430)
+|+|+|++||++++ ||+||||+++|++||+++.+.+ ++++++|++.++++++|||||||||+ +.|||++
T Consensus 203 ~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk--~~DPRa~ 280 (378)
T 1a59_A 203 ADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYK--NGDSRVP 280 (378)
T ss_dssp CCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCS--SCCTTHH
T ss_pred CcHHHHHHHHHHHccCCccCCchHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHhCCCeeeCCCCcccC--CCCCcHH
Confidence 99999999999999 9999999999999999997651 46889999999999999999999997 4799999
Q ss_pred HHHHHHHHhC---CCChHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhh
Q 014132 324 LLQKFARTHF---PSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLAR 400 (430)
Q Consensus 324 ~L~~~~~~~~---~~~~~~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R 400 (430)
+|+++++++. +.+++++++.++|+++.+. |+++||||||+|+++++||||.++||+ ||++||
T Consensus 281 ~l~~~a~~~~~~~~~~~~~~~a~~le~~~~~~-k~l~pNVD~~sg~i~~~lGip~~~~t~--------------lF~isR 345 (378)
T 1a59_A 281 TMKSALDAMIKHYDRPEMLGLYNGLEAAMEEA-KQIKPNLDYPAGPTYNLMGFDTEMFTP--------------LFIAAR 345 (378)
T ss_dssp HHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHH-HCCCBCTHHHHHHHHHHTTCCGGGHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-hCCCCChHHHHHHHHHHhCCChhhcch--------------hhhhhc
Confidence 9999999883 5689999999999998664 899999999999999999999999998 999999
Q ss_pred hhhhhhhHHHhhhhcCCCCCC
Q 014132 401 SIGLIGHTFDQKRLKQPLYRH 421 (430)
Q Consensus 401 ~~GwiAH~~Eq~~~~~P~~r~ 421 (430)
++||+|||+||++.+ ++.||
T Consensus 346 ~~Gw~AH~~Eq~~~~-~i~RP 365 (378)
T 1a59_A 346 ITGWTAHIMEQVADN-ALIRP 365 (378)
T ss_dssp HHHHHHHHHHHHHTC-CCCCC
T ss_pred chhHHHHHHHHHhcC-CCcCc
Confidence 999999999999655 35554
No 15
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=5.3e-59 Score=475.14 Aligned_cols=320 Identities=19% Similarity=0.188 Sum_probs=244.2
Q ss_pred cCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH-HHHHHc-CCCCCCEEEEecCCcccccccccccccccccc
Q 014132 23 GGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEALKQ-GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKS 100 (430)
Q Consensus 23 Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~~-~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~ 100 (430)
|+=.|.|.++.|+.+. ..-+++-..+++||.|..+|.+. .+-++. +..+..|..++.+
T Consensus 55 g~L~YRGy~I~dLa~~-~~fEevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~~~~------------------- 114 (404)
T 3o8j_A 55 NDLHYRGYDILDLAEH-CEFEEVAHLLIHGKLPTRDELNAYKSKLKALRGLPANVRTVLEA------------------- 114 (404)
T ss_dssp CCEEETTEEHHHHHHH-CCHHHHHHHHHTSSCCCHHHHHHHHHHHHTTCCCCHHHHHHHHT-------------------
T ss_pred CEEEECCeEHHHHHhc-CCHHHHHHHHHcCcCCCHHHHHHHHHHHHHccCCCHHHHHHHHh-------------------
Confidence 3467899999999874 22355666789999998776543 223332 1122222222211
Q ss_pred cCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHHHHHHhhc
Q 014132 101 GGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 180 (430)
Q Consensus 101 ~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~a~~~~i~ 180 (430)
.+.-.+|=+++..+-.+| +.++|+.++.+.+ ...+++++|+||+|+|++++|+..
T Consensus 115 ------------------~p~~~hPM~~L~~~vsaL------~~~~~~~~d~~~~-~~~~~a~rLiAk~pti~a~~yr~~ 169 (404)
T 3o8j_A 115 ------------------LPAASHPMDVMRTGVSAL------GCTLPEKEGHTVS-GARDIADKLLASLSSILLYWYHYS 169 (404)
T ss_dssp ------------------SCTTSCHHHHHHHHHHHH------HHHSCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCCCChHHHHHHHHHHH------HhcCcccccCCcH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222222222222 2233433333322 223567899999999999999953
Q ss_pred cCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHHHHH
Q 014132 181 DDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLV 260 (430)
Q Consensus 181 ~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~av~ 260 (430)
..++.+..+..++++ .+||++|+ ++++|++.++++||++||||||||+|+|| |++|+++||++|+|+|++
T Consensus 170 -~g~~~i~~~~~~ls~-------a~nfl~ml-~g~~p~~~~~~~ld~~LiLhADHe~N~St-~taRvvaSt~ad~ysava 239 (404)
T 3o8j_A 170 -HNGERIQPETDDDSI-------GGHFLHLL-HGEKPTQSWEKAMHISLVLYAEHEFNAST-FTSRVIAGTGSDVYSAII 239 (404)
T ss_dssp -HHCCCCCCCCCCSSH-------HHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCCSSSHHH-HHHHHHHTTTCCHHHHHH
T ss_pred -cCCCCCCCCCCCCCH-------HHHHHHHh-cCCCCCHHHHHHHHHHHhhccCCCCChHH-HHHHHHHhcCCCHHHHHH
Confidence 223344444456654 45555555 78889999999999999999999999999 999999999999999999
Q ss_pred Hhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhC---CCC
Q 014132 261 SGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHF---PSV 336 (430)
Q Consensus 261 Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~~~---~~~ 336 (430)
||++++ ||+||||+++|++||+++.+. +++++||++.++++++|||||||||+ +.|||+++|+++++++. ..+
T Consensus 240 agi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~l~~~~~I~GFGHrVyk--~~DPRa~~l~~~a~~l~~~~g~~ 316 (404)
T 3o8j_A 240 GAIGALRGPKHGGANEVSLEIQQRYETP-DEAEADIRKRVENKEVVIGFGHPVYT--IADPRHQVIKRVAKQLSEEGGSL 316 (404)
T ss_dssp HHHHHHTSTTTTCHHHHHHHHHTTCSSH-HHHHHHHHHHHHTTCCCTTBCCSSCS--SCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHccCCCcCCHHHHHHHHHHHhcCc-hhHHHHHHHHHhcCCcccCCCCCCCC--CCCcHHHHHHHHHHHHHHhcCCc
Confidence 999998 999999999999999998765 58999999999999999999999997 57999999999999874 358
Q ss_pred hHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhhHHHhhhhc
Q 014132 337 KYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLK 415 (430)
Q Consensus 337 ~~~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH~~Eq~~~~ 415 (430)
++++++.++|+++.+ .|+++||||||+|+++.+||||.++||+ ||++||++||+|||+||+..+
T Consensus 317 ~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~--------------lFaisR~~Gw~AH~~Eq~~~~ 380 (404)
T 3o8j_A 317 KMYHIADRLETVMWE-TKKMFPNLDWFSAVSYNMMGVPTEMFTP--------------LFVIARVTGWAAHIIEQRQDN 380 (404)
T ss_dssp HHHHHHHHHHHHHHH-HHCCCBCTTTHHHHHHHHTTCCGGGHHH--------------HHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHH-hcCCCcChHHHHHHHHHHcCCChHhHHH--------------HHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999865 6899999999999999999999999998 999999999999999998654
No 16
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=7.7e-58 Score=465.76 Aligned_cols=331 Identities=18% Similarity=0.189 Sum_probs=254.2
Q ss_pred eEEEEecC-CccCCCCHHHHHH-HhhcCCCccEEEEeeccCChhHHHH-HHHHH-cCCCCCCEEEEecCCcccccccccc
Q 014132 17 YEGIAIGG-DVFPGSTLSDHIL-RFNNIPQVKMMVVLGELGGRDEYSL-VEALK-QGKVNKPVVAWVSGTCARLFKSEVQ 92 (430)
Q Consensus 17 S~~i~~Gg-d~i~g~~~~d~l~-~l~~Dp~T~~Ivl~gE~~~~~E~~~-a~~~~-~~~~~KPvv~~~~G~~~~~~p~g~~ 92 (430)
|..-+-.| =.|+|.++.|+.+ . ..-+++-..+++||.|..+|.+. .+-++ .+..+.+++.++.+
T Consensus 22 s~id~~~G~L~YRGy~i~dLa~~~-~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~~~----------- 89 (385)
T 2ifc_A 22 TTIDGNKGILRYGGYSVEDIIASG-AQDEEIQYLFLYGNLPTEQELRKYKETVQKGYKIPDFVINAIRQ----------- 89 (385)
T ss_dssp EEEETTTTEEEETTEEHHHHHHTT-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHGGGCCCHHHHHHHHT-----------
T ss_pred eEEECCCCEEEECCccHHHHHhcC-CCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHHHh-----------
Confidence 44444333 5689999999988 3 23445666688899998776543 22222 11222223322211
Q ss_pred cccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhH
Q 014132 93 FGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAP 172 (430)
Q Consensus 93 ~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i 172 (430)
.+.-.+|=+++..+-..+.. ++|..+ .++ ....+++++|++|+|+|
T Consensus 90 --------------------------~p~~~hpM~~l~~~v~~l~~------~~~~~~-~~~-~~~~~~a~~Lia~~p~i 135 (385)
T 2ifc_A 90 --------------------------LPRESDAVAMQMAAVAAMAA------SETKFK-WNK-DTDRDVAAEMIGRMSAI 135 (385)
T ss_dssp --------------------------SCTTSCHHHHHHHHHHHHHH------HCTTCC-CCT-TTHHHHHHHHHHHHHHH
T ss_pred --------------------------CCCCCCchHHHHHHHHHHHh------cCCccc-CCH-HHHHHHHHHHHHHHHHH
Confidence 12122222222222222222 223222 123 23456789999999999
Q ss_pred HHHHHhhccCCCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccC
Q 014132 173 THIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAG 252 (430)
Q Consensus 173 ~a~~~~i~~~~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~ 252 (430)
++++|+ ...|++++.+..++ ||++++++|++++.|++.++++||++||||||||+|+|| |++|+++||+
T Consensus 136 ~a~~y~--~~~g~~~i~p~~~l--------s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St-~aarv~aSt~ 204 (385)
T 2ifc_A 136 TVNVYR--HIMNMPAELPKPSD--------SYAESFLNAAFGRKATKEEIDAMNTALILYTDHEVPAST-TAGLVAVSTL 204 (385)
T ss_dssp HHHHHH--HHTTCCCCCCCCCS--------CHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCSSCHHH-HHHHHHHTTT
T ss_pred HHHHHH--HhcCCCCCCCCCCC--------CHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCCccHHH-HHHHHHHhcC
Confidence 999999 44577777666665 456655556688888999999999999999999999998 9999999999
Q ss_pred CChHHHHHHhhhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHH-HcCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 014132 253 KDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIKRGDNRDKRVELLQKFAR 330 (430)
Q Consensus 253 a~~~~av~Agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~-~~~~~ipGFGH~vy~~~~~DPRa~~L~~~~~ 330 (430)
+|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.+ +++++|||||||||+ +.|||+++|+++++
T Consensus 205 ~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~i~~~l~~~~~~i~GfGHrvyk--~~DPRa~~L~~~a~ 281 (385)
T 2ifc_A 205 SDMYSGITAALAALKGPLHGGAAEAAIAQFDEIKDP-AMVEKWFNDNIINGKKRLMGFGHRVYK--TYDPRAKIFKGIAE 281 (385)
T ss_dssp CCHHHHHHHHHHHHTSTTTSSHHHHHHHHHHHHCSG-GGHHHHHHHHTTTSSSCCTTBCCSSCS--SCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHccCCccCChHHHHHHHHHHhCCH-HHHHHHHHHHHHhcCCcccCCCCcccC--CCCCchHHHHHHHH
Confidence 99999999999998 999999999999999999876 58999999999 999999999999997 47999999999999
Q ss_pred HhC----CCChHHHHHHHHHHHHhh--ccCCcccchhhHHHHHHHHhccCC--CCCchhhhHHHHhhhhcchhhhhhhhh
Q 014132 331 THF----PSVKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGS--GMFSKQEIDEIVEIGYLNGLFVLARSI 402 (430)
Q Consensus 331 ~~~----~~~~~~~~a~~~e~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~--~~ft~~e~~~~~p~~~~~~lf~~~R~~ 402 (430)
++. ..+++++++.++|+++.+ +.|+++||||||+|+++++||||. ++||+ ||++||++
T Consensus 282 ~l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~v~~~lGip~~~~~~t~--------------lF~isR~~ 347 (385)
T 2ifc_A 282 KLSSKKPEVHKVYEIATKLEDFGIKAFGSKGIYPNTDYFSGIVYMSIGFPLRNNIYTA--------------LFALSRVT 347 (385)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHGGGTCCBCTTTTHHHHHHHHTCCSGGGHHHH--------------HHHHHHHH
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHcCCCcchhhhhh--------------HHHHhhcc
Confidence 883 357899999999999865 368999999999999999999999 99988 99999999
Q ss_pred hhhhhHHHhhhhcCCCCCC
Q 014132 403 GLIGHTFDQKRLKQPLYRH 421 (430)
Q Consensus 403 GwiAH~~Eq~~~~~P~~r~ 421 (430)
||+|||+||++.+.++.||
T Consensus 348 Gw~AH~~Eq~~~~~~i~RP 366 (385)
T 2ifc_A 348 GWQAHFIEYVEEQQRLIRP 366 (385)
T ss_dssp HHHHHHHHHHHHHCCCCCC
T ss_pred cHHHHHHHHHhccCCccCc
Confidence 9999999999873477776
No 17
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.1e-57 Score=467.21 Aligned_cols=334 Identities=20% Similarity=0.237 Sum_probs=252.0
Q ss_pred CccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHH--HHHHHcCCCCCCEEEEecCCcccccccccccccccccccC
Q 014132 25 DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL--VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGG 102 (430)
Q Consensus 25 d~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~--a~~~~~~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~~~ 102 (430)
=.|+|.++.|+.+. ..-+++-..+++||.|..+|.+. .++.+.+..+.+++.++.+. |.. |...+..
T Consensus 46 L~YRGy~i~dLa~~-~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~~~~-----p~~----hPM~~l~- 114 (409)
T 2ibp_A 46 LWYRGYRIEELARL-STYEEVSYLILYGRLPTKRELEDYINRMKKYRELHPATVEVIRNL-----AKA----HPMFALE- 114 (409)
T ss_dssp EEETTEEHHHHHHH-CCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSCCHHHHHHHHHT-----TTS----CHHHHHH-
T ss_pred EEEcCccHHHHHcc-CCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHHHhC-----Ccc----CchHHHH-
Confidence 46899999999985 34556777788999999876543 22222333445555543222 212 3322220
Q ss_pred CcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhHHHHHhcchhhHHHHHHhhccC
Q 014132 103 EMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDD 182 (430)
Q Consensus 103 ~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~l~ak~p~i~a~~~~i~~~ 182 (430)
+ -..+|... +++. .+ ..+++. +|..... .+ ....+++++|+||+|+|++++|+. .
T Consensus 115 ---~---~v~aL~~~------~~~~-~~-~~~~~~----~g~~k~~----~~-~~~~~~a~~Lia~~p~i~a~~y~~--~ 169 (409)
T 2ibp_A 115 ---A---AVAAEGAY------DEDN-QK-LIEALS----VGRYKAE----EK-ELAYRIAEKLVAKMPTIVAYHYRF--S 169 (409)
T ss_dssp ---H---HHHHHHHH------CHHH-HH-HHHHHH----TTCCSHH----HH-HHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred ---H---HHHHHhcc------Cccc-cc-hhhhhh----ccccccc----CH-HHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 0 11112110 0000 00 001111 2322110 01 122457899999999999999994 4
Q ss_pred CCCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhccCCChHHHHHHh
Q 014132 183 RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSG 262 (430)
Q Consensus 183 ~g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt~a~~~~av~Ag 262 (430)
.|++++.+..+++ |++++++|++++.|++.++++||++||||||||+|+|| |++|+++||++|+|+|++||
T Consensus 170 ~g~~~i~p~~~ls--------~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg~naST-~aaRv~aSt~ad~~savaag 240 (409)
T 2ibp_A 170 RGLEVVRPRDDLG--------HAANFLYMMFGREPDPLASRGIDLYLILHADHEVPAST-FAAHVVASTLSDLYSSVAAA 240 (409)
T ss_dssp TTCCCCCCCTTSC--------HHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHH-HHHHHHHTTTCCHHHHHHHH
T ss_pred cCCCcccCCCCCC--------HHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCCChhH-HHHHHHhhcCCcHHHHHHHH
Confidence 5777777666654 55555555588889999999999999999999999999 99999999999999999999
Q ss_pred hhcc-CCCccCchHHHHHHHHHHhccCCCHHHHHHHHHHc-CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh----CCCC
Q 014132 263 LLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKK-GIRVPGIGHRIKRGDNRDKRVELLQKFARTH----FPSV 336 (430)
Q Consensus 263 l~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~-~~~ipGFGH~vy~~~~~DPRa~~L~~~~~~~----~~~~ 336 (430)
++++ ||+||||++.|++||+++.+. ++++++|++.+++ +++|||||||||+ +.|||+++|+++++++ +..+
T Consensus 241 i~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvyk--~~DPRa~~L~~~a~~l~~~~~~~g 317 (409)
T 2ibp_A 241 IAALKGPLHGGANEMAVRNYLEIGTP-AKAKEIVEAATKPGGPKLMGVGHRVYK--AYDPRAKIFKEFSRDYVAKFGDPQ 317 (409)
T ss_dssp HHHHTSTTTSCHHHHHHHHHHHHCCG-GGHHHHHHHHTSTTCCCCTTBCCSSCS--SCCHHHHHHHHHHHHHHHHHCCTT
T ss_pred HHHccCCccCCchHHHHHHHHHhCCH-HHHHHHHHHHHHhcCCcCcCCCccccC--CCCCchHHHHHHHHHHHHHhCCCh
Confidence 9998 999999999999999999876 5899999999999 9999999999997 4799999999999988 4444
Q ss_pred hHHHHHHHHHHHHhhc----cCCcccchhhHHHHHHHHhccCCCCCchhhhHHHHhhhhcchhhhhhhhhhhhhhHHHhh
Q 014132 337 KYMEYAVQVETYTLSK----ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQK 412 (430)
Q Consensus 337 ~~~~~a~~~e~~~~~~----~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~~GwiAH~~Eq~ 412 (430)
++++++.++|+++.+. .|+++||||||+|+++++||||.++||+ ||++||++||+|||+||+
T Consensus 318 ~~~~~a~~le~~~l~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~--------------lFaisR~~Gw~AH~~Eq~ 383 (409)
T 2ibp_A 318 NLFAIASAIEQEVLSHPYFQQRKLYPNVDFWSGIAFYYMGIPYEYFTP--------------IFAMSRVVGWVAHVLEYW 383 (409)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHTTCCBCGGGTHHHHHHHHTCCGGGHHH--------------HHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHccchhhhhcCCCCChHHHHHHHHHHhCCCHHhhhh--------------HHHHhccccHHHHHHHHH
Confidence 9999999999998332 5899999999999999999999999998 999999999999999999
Q ss_pred hhcCCCCCC
Q 014132 413 RLKQPLYRH 421 (430)
Q Consensus 413 ~~~~P~~r~ 421 (430)
+.+ ++.||
T Consensus 384 ~~~-~i~RP 391 (409)
T 2ibp_A 384 ENN-RIFRP 391 (409)
T ss_dssp GGC-CCCCC
T ss_pred hcC-CccCc
Confidence 755 45665
No 18
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=99.97 E-value=1.2e-31 Score=268.36 Aligned_cols=154 Identities=55% Similarity=1.001 Sum_probs=131.0
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHcCCCCCCEEEEec
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~~~~~KPvv~~~~ 80 (430)
|++|+++++.++|+|+|++||+|||+|.|++|.|+|++|.+||+|++|+||||+++..|+++.+++++...+||||+||+
T Consensus 180 l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e~~~~~~~r~~~~~KPVV~~ka 259 (334)
T 3mwd_B 180 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPIVCWCI 259 (334)
T ss_dssp HHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHTTSCCSCEEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHHHHHHHHHHhhcCCCCEEEEEc
Confidence 57899999999999999999999999999999999999999999999999999999999899999996558899999999
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPP 154 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~~ 154 (430)
|++++.+..+++||||||+++...+++++|.++|+++|+.++++++||+++++++|++|++.|.+.|.+|..+|
T Consensus 260 Grs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~ 333 (334)
T 3mwd_B 260 GTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLVANGVIVPAQEVPPP 333 (334)
T ss_dssp CTTCC----------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHHHHTTSCCCCCCCCCC
T ss_pred CCCcccccccccccchhhhccCCCccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHHHHCCcEeeCCCCCCC
Confidence 99994222367799999999888889999999999999999999999999999999999999999999886665
No 19
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=99.96 E-value=7.7e-29 Score=271.96 Aligned_cols=153 Identities=54% Similarity=0.975 Sum_probs=125.8
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHcCCCCCCEEEEec
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~~~~~KPvv~~~~ 80 (430)
|++|+++++.++|+|+|++||+|||++.|++|.|+|++|.+||+|++|+||+|++++.|+++++++++...+||||+||+
T Consensus 666 l~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Ivly~Ei~g~~f~~aA~~~~~~~~~KPVVa~ka 745 (829)
T 3pff_A 666 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPIVCWCI 745 (829)
T ss_dssp HHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHTTSCCSCEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEEEEEecCchHHHHHHHHHHhccCCCCEEEEEe
Confidence 57999999999999999999999999999999999999999999999999999999999999999985457899999999
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTP 153 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~e~~~ 153 (430)
|++++.+|.+++||||||+++...+++++|.++|+++|+.|+++++||+++++++|++|++.|.+.|.+|..+
T Consensus 746 Grsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGvi~v~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~ 818 (829)
T 3pff_A 746 GTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLVANGVIVPAQEVPA 818 (829)
T ss_dssp CSSTTC---------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHHHHTTSCCC------
T ss_pred cCcCcccccccccccccccccCCcccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHHHHCCcEeeCCCCCc
Confidence 9999533358889999999998888999999999999999999999999999999999999999999977443
No 20
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=99.96 E-value=1e-28 Score=244.16 Aligned_cols=134 Identities=30% Similarity=0.478 Sum_probs=110.3
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHcCCCCCCEEEEec
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~~~~~KPvv~~~~ 80 (430)
|++++.+++.++|+|+|++||+||+++.|++|.|+|+||.+||+|++|++|+|++++.|+++++|+++...+||||++|+
T Consensus 163 l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~~~~~~KPVv~~k~ 242 (297)
T 2yv2_A 163 LTYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKKGEFTKPVIAYIA 242 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHHTTSCCSCEEEEES
T ss_pred HHHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhccCCCCEEEEEe
Confidence 47899999999999999999999999999999999999999999999999999999999999999986557899999999
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHH
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 137 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~ 137 (430)
|+++ |.++++||||+++++..|++++|.++|+|+|+.++++++||+++++++|+
T Consensus 243 G~s~---~~~~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~ 296 (297)
T 2yv2_A 243 GRTA---PPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKALR 296 (297)
T ss_dssp CCC---------------------CSHHHHHHHHHTTTCEEESSGGGHHHHHHHHC-
T ss_pred CCCC---ccccccCCccccccCCCCCHHHHHHHHHHcCCeEeCCHHHHHHHHHHHhh
Confidence 9999 57888999999998888999999999999999999999999999999885
No 21
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=99.95 E-value=2.2e-28 Score=242.66 Aligned_cols=135 Identities=35% Similarity=0.509 Sum_probs=127.1
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHcC---CCCCCEEE
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG---KVNKPVVA 77 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~~---~~~KPvv~ 77 (430)
|++++.+++.++|+|+|++||+||++++|++|.|+|++|.+||+|++|++|+|++++.|+++++|+++. ..+||||+
T Consensus 164 l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l~~E~~g~~e~~~~~f~~~~~~~~~~KPVv~ 243 (305)
T 2fp4_A 164 LTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 243 (305)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEEEEESSSSHHHHHHHHHHHHSCSTTCCCEEE
T ss_pred HHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEEEEecCCchhhHHHHHHHHHHHhcCCCCEEE
Confidence 478999999999999999999999999999999999999999999999999999999999999999842 24899999
Q ss_pred EecCCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHHH
Q 014132 78 WVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 138 (430)
Q Consensus 78 ~~~G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~~ 138 (430)
+|+|+++ |.+++|||||++++++.|+++.|.++|+++|+.++++++||+++++.+|++
T Consensus 244 ~k~G~s~---~~g~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~ 301 (305)
T 2fp4_A 244 FIAGLTA---PPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 301 (305)
T ss_dssp EEECTTC---CTTCCCSSTTCCCBTTBCCHHHHHHHHHHTTCEECSSTTCHHHHHHHHHHH
T ss_pred EEecCCc---cccccccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHHHh
Confidence 9999999 578889999999988889999999999999999999999999999999975
No 22
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=99.95 E-value=1.4e-28 Score=242.24 Aligned_cols=132 Identities=29% Similarity=0.503 Sum_probs=109.3
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHcCCCCCCEEEEec
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~~~~~KPvv~~~~ 80 (430)
|++++.+++.++|+|+|++||+||++++|++|.|+|+||.+||+|++|++|+|++++.|+++++|+++ ..+||||++|+
T Consensus 156 l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~-~~~KPVv~~k~ 234 (288)
T 1oi7_A 156 LTYEAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD-HMKKPVVGFIG 234 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH-HCCSCEEEEES
T ss_pred HHHHHHHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-cCCCCEEEEEe
Confidence 47899999999999999999999999999999999999999999999999999999999889999986 47899999999
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHH
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 136 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~ 136 (430)
|+++ |.+++|||||+++++..|++++|.++|+|+|+.++++++||+++++++|
T Consensus 235 G~~~---~~~~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 1oi7_A 235 GRSA---PKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 287 (288)
T ss_dssp CC---------------------CCSHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred cCCC---CccccCcchhhcccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 9999 5788899999999888899999999999999999999999999999987
No 23
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=99.95 E-value=1.3e-28 Score=243.18 Aligned_cols=132 Identities=25% Similarity=0.440 Sum_probs=108.3
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHcCCCCCCEEEEec
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~~~~~KPvv~~~~ 80 (430)
|++++.+++.++|+|+|++||+||++++|++|.|+|+||.+||+|++|++|+|++++.|+++++|+++ .+||||++|+
T Consensus 162 l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~~~~~~~--~~KPVv~~k~ 239 (294)
T 2yv1_A 162 LTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEK--MKKPVIGYIA 239 (294)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEESSSSHHHHHHHHHTT--CSSCEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh--CCCCEEEEEe
Confidence 47899999999999999999999999999999999999999999999999999999998889999984 6899999999
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHH
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 137 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~ 137 (430)
|+++ |.++++||||+++++..|++++|.++|+|+|+.++++++||+++++++|+
T Consensus 240 G~~~---~~g~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~~ 293 (294)
T 2yv1_A 240 GQSA---PEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILG 293 (294)
T ss_dssp CC----------------------CCHHHHHHHHHHHTCEECSSTTHHHHHHHHHHC
T ss_pred cCCC---CccccCCchhhhccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHhc
Confidence 9999 57888999999998888999999999999999999999999999999984
No 24
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=99.95 E-value=3.9e-28 Score=238.98 Aligned_cols=132 Identities=32% Similarity=0.484 Sum_probs=125.8
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHcCCCCCCEEEEec
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~~~~~KPvv~~~~ 80 (430)
|++++.+++.++|+|+|++||+||+++.|+++.|+|+||.+||+|++|++|+|++++.|+++++|+++ ..+||||++|+
T Consensus 156 l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~-~~~KPVv~~k~ 234 (288)
T 2nu8_A 156 LTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE-HVTKPVVGYIA 234 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH-HCCSCEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-cCCCCEEEEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999987 57899999999
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHH
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 136 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~ 136 (430)
|+++ |.+++|||||++++++.|+++.|.++|+|+|+.++++++||+++++++|
T Consensus 235 G~~~---~~g~~~~Htga~~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 235 GVTA---PKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 (288)
T ss_dssp CTTC---CTTCCCSSTTCCCCTTCCCHHHHHHHHHHTTCEECSSGGGHHHHHHHHC
T ss_pred CCCC---cccccccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 9999 5788899999999888899999999999999999999999999999986
No 25
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=99.84 E-value=2.8e-21 Score=201.41 Aligned_cols=119 Identities=14% Similarity=0.213 Sum_probs=93.5
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccCC--hhHHHHHHHHHcCCCCCCEEEE
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG--RDEYSLVEALKQGKVNKPVVAW 78 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~--~~E~~~a~~~~~~~~~KPvv~~ 78 (430)
|++++.+++.++|+|+|++||+||++ |++|.|+|+||.+||+|++|++|+|+.+ ..++++++++. .+||||++
T Consensus 161 ~~~~~~~~~~~~g~G~s~~vs~G~~~--~~~~~d~l~~~~~D~~t~~I~l~~E~i~~~~~f~~~a~~~~---~~KPVv~~ 235 (457)
T 2csu_A 161 LGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRVT---KKKPIIAL 235 (457)
T ss_dssp HHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHHHH---HHSCEEEE
T ss_pred HHHHHHHHHHhcCCCeeEEEECCCcC--CCCHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHHHHHhc---CCCCEEEE
Confidence 47899999999999999999999999 9999999999999999999999999844 34677777774 47999999
Q ss_pred ecCCcccccccccc--cccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHH
Q 014132 79 VSGTCARLFKSEVQ--FGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAI 132 (430)
Q Consensus 79 ~~G~~~~~~p~g~~--~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~ 132 (430)
|+|+++ .|++ +||||++. |++++|.++|+++|+.++++++|+++..
T Consensus 236 k~G~~~----~g~~aa~~Htgala----g~~~~~~AafRqaGv~~v~~~~El~~~~ 283 (457)
T 2csu_A 236 KAGKSE----SGARAASSHTGSLA----GSWKIYEAAFKQSGVLVANTIDEMLSMA 283 (457)
T ss_dssp ECC--------------------------CHHHHHHHHHHTTCEEESSHHHHHHHH
T ss_pred EcCCCc----cccchhhcccCccC----CcHHHHHHHHHhCCCeEECCHHHHHHHH
Confidence 999999 4766 99999998 8999999999999999999999888653
No 26
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=99.66 E-value=5.1e-17 Score=169.55 Aligned_cols=108 Identities=18% Similarity=0.182 Sum_probs=93.0
Q ss_pred ChHHHHHHHHhcCCCeeEEEEecCCc----cCCCCHHHHHHHhhcCCCccEEEEeeccCChhHHHHHHHHHc-CCCCCCE
Q 014132 1 MSNELYNTIARVTDGIYEGIAIGGDV----FPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ-GKVNKPV 75 (430)
Q Consensus 1 ~~~ei~~~~~~~g~G~S~~i~~Ggd~----i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~~a~~~~~-~~~~KPv 75 (430)
|++++.+++.++|+|+|++||+||++ |.|++|.|+|+||.+||+|++|++|+|++. |...++|+++ ++.+|||
T Consensus 124 l~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~ly~E~~~--e~~~~~f~~~ar~~~KPV 201 (480)
T 3dmy_A 124 GIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA--EAVRLKIVNAMKATGKPT 201 (480)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCC--HHHHHHHHHHHHHHCSCE
T ss_pred HHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEEEEecCC--cHHHHHHHHHHHhCCCCE
Confidence 47899999999999999999999994 469999999999999999999999999864 3334778762 2368999
Q ss_pred EEEecCCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHH
Q 014132 76 VAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 137 (430)
Q Consensus 76 v~~~~G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~ 137 (430)
|++|+|+++ .+ |+|+|+.++++++||+++++..-.
T Consensus 202 V~~k~Grs~----~g-----------------------~r~~Gvirv~~~~el~~~a~~l~~ 236 (480)
T 3dmy_A 202 VALFLGYTP----AV-----------------------ARDENVWFASSLDEAARLACLLSR 236 (480)
T ss_dssp EEEETTCCC----SS-----------------------SEETTEEEESSHHHHHHHHHHHHH
T ss_pred EEEEeCCCC----cc-----------------------cccCCEEEECCHHHHHHHHHHHhc
Confidence 999999998 23 789999999999999998876554
No 27
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=95.48 E-value=0.041 Score=55.54 Aligned_cols=108 Identities=12% Similarity=0.086 Sum_probs=73.5
Q ss_pred hHHHHHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHh
Q 014132 171 APTHIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 248 (430)
Q Consensus 171 ~i~a~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~ 248 (430)
.+++..|.|+...| ..+.||||++.+|..+. +|.+++|+||+|.-|++++.+.|..-|. .|..-+.. ...+.
T Consensus 13 gv~~~~t~Is~idg~~g~L~YRGy~I~dLa~~~-~feev~yLLl~G~lPt~~el~~f~~~l~---~~~~lp~~--~~~~~ 86 (375)
T 3tqg_A 13 GQSAGETSIATVGKEGHGLTYRGYRIEDLAANA-TFEEVAYLLLKNKLPTKSELDAYTKKLV---NLRSLPPA--LKDTL 86 (375)
T ss_dssp ---CCEESSEEECTTSCCEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHH
T ss_pred CCeEeeeeceEEeCCCCEEEECCeeHHHHHhcC-CHHHHHHHHHcCcCcCHHHHHHHHHHHH---HccCCCHH--HHHHH
Confidence 44455567776554 56999999999998887 9999999999999998888888888654 45544443 34444
Q ss_pred hcc--CCChHHHHHHhhhccC---CCcc--CchHHHHHHHHHH
Q 014132 249 ARA--GKDLVSSLVSGLLTIG---PRFG--GAIDDAARYFKDA 284 (430)
Q Consensus 249 aSt--~a~~~~av~Agl~a~G---p~hG--Ga~~~a~~~l~~~ 284 (430)
.+- .++|-..+.+++++++ |... ...+.+++++..+
T Consensus 87 ~~~p~~~hpM~~l~~~v~aL~~~~~~~~~~~~~~~a~~LiAk~ 129 (375)
T 3tqg_A 87 ERIPASSHPMDVMRTGCSMLGNLEPENGFENEQNIADRLVAIF 129 (375)
T ss_dssp HTSCTTSCHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH
T ss_pred HhCCCCCChHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 443 4788888888888764 3321 2234566666654
No 28
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=94.97 E-value=0.057 Score=54.97 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=63.3
Q ss_pred HHHhhccCC--CCcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhcc-
Q 014132 175 IISTISDDR--GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA- 251 (430)
Q Consensus 175 ~~~~i~~~~--g~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt- 251 (430)
..++|+... ...+.||||++.+|..+. +|.+++|+||+|.-|+.++.+.|..-|. .|..-+.. ...+..+-
T Consensus 43 ~~T~Is~idg~~g~L~YRGy~I~dLa~~~-~fEevayLLl~G~LPt~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p 116 (404)
T 3o8j_A 43 GNTALCTVGKSGNDLHYRGYDILDLAEHC-EFEEVAHLLIHGKLPTRDELNAYKSKLK---ALRGLPAN--VRTVLEALP 116 (404)
T ss_dssp CEESSEEECC-CCCEEETTEEHHHHHHHC-CHHHHHHHHHTSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHHHTSC
T ss_pred eeeeceeeeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCcCCCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCC
Confidence 445666544 457999999999998887 8999999999998888888888888664 44444443 34444333
Q ss_pred -CCChHHHHHHhhhccC
Q 014132 252 -GKDLVSSLVSGLLTIG 267 (430)
Q Consensus 252 -~a~~~~av~Agl~a~G 267 (430)
.++|-..+.+++++++
T Consensus 117 ~~~hPM~~L~~~vsaL~ 133 (404)
T 3o8j_A 117 AASHPMDVMRTGVSALG 133 (404)
T ss_dssp TTSCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHH
Confidence 4788778888777763
No 29
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=94.70 E-value=0.063 Score=54.78 Aligned_cols=106 Identities=13% Similarity=0.085 Sum_probs=70.4
Q ss_pred HHHHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhc
Q 014132 173 THIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR 250 (430)
Q Consensus 173 ~a~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aS 250 (430)
++..+.|+...| ..+.||||++.+|..+. +|.++.|+||+|.-|++++.+.|..-|.- |..-+.. +..+..+
T Consensus 57 ~~~~t~Is~idg~~G~L~YRGy~I~dLa~~~-~fEevayLLl~G~LPt~~el~~f~~~l~~---~~~lp~~--v~~~i~~ 130 (414)
T 3hwk_A 57 VVDTTAISKVVPQTNSLTYRGYPVQDLAARC-SFEQVAFLLWRGELPTDAELALFSQRERA---SRRVDRS--MLSLLAK 130 (414)
T ss_dssp EEEEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHH---TCCCCHH--HHHHHHH
T ss_pred eeeeeeceEEeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHHH---ccCCCHH--HHHHHHh
Confidence 334566665443 46999999999998887 99999999999998988888888886654 3333332 3344433
Q ss_pred c--CCChHHHHHHhhhccC---CCc---cCchHHHHHHHHHH
Q 014132 251 A--GKDLVSSLVSGLLTIG---PRF---GGAIDDAARYFKDA 284 (430)
Q Consensus 251 t--~a~~~~av~Agl~a~G---p~h---GGa~~~a~~~l~~~ 284 (430)
- .++|-..+.+++++++ |.. -...+.+++++..+
T Consensus 131 ~p~~~hPM~~l~~~vsaL~~~~~~~~~~~~~~~~a~rLiAk~ 172 (414)
T 3hwk_A 131 LPDNCHPMDVVRTAISYLGAEDPDEDDAAANRAKAMRMMAVL 172 (414)
T ss_dssp SCTTSCHHHHHHHHHHHHHHTCTTTTCGGGHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHHH
Confidence 3 4678777878777763 322 12234456666543
No 30
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=94.64 E-value=0.093 Score=52.88 Aligned_cols=86 Identities=10% Similarity=0.024 Sum_probs=60.7
Q ss_pred HHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhc--
Q 014132 175 IISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR-- 250 (430)
Q Consensus 175 ~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aS-- 250 (430)
..|.|+...| ..+.|||+++.+|..+. +|.++.++||+|.-|+.++.+.+...|.-+ ..-+.. ..++..+
T Consensus 13 ~~t~Is~id~~~G~L~YRGy~i~~La~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~~~~p 86 (373)
T 1vgp_A 13 KETEITYIDGELGRLYYRGYSIYDLAEFS-NFEEVSYLILYGKLPNREELNWFQEKLREE---RYLPDF--IIKFLREVR 86 (373)
T ss_dssp CCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CCCCHH--HHHHHHHSC
T ss_pred eeeeCeEEECCCCEEEEcCeeHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHc---cCCCHH--HHHHHHhCC
Confidence 3456665555 35899999999999887 999999999999999988888888766543 333333 2223223
Q ss_pred cCCChHHHHHHhhhcc
Q 014132 251 AGKDLVSSLVSGLLTI 266 (430)
Q Consensus 251 t~a~~~~av~Agl~a~ 266 (430)
..++|-..+.++++++
T Consensus 87 ~~~hpM~~l~~~v~~l 102 (373)
T 1vgp_A 87 KDAQPMDILRTAVSLL 102 (373)
T ss_dssp TTSCHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHH
Confidence 3467777777777665
No 31
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=94.44 E-value=0.038 Score=55.61 Aligned_cols=88 Identities=14% Similarity=0.140 Sum_probs=62.9
Q ss_pred HHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhc--
Q 014132 175 IISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR-- 250 (430)
Q Consensus 175 ~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aS-- 250 (430)
..|.|+...| ..+.|||+++.+|.++. +|.++.|+||+|.-|++++.+.+...|.-+ ..-+.. ..++..+
T Consensus 12 ~~T~Is~id~~~G~L~YRGy~i~dLa~~~-~feeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~~~~p 85 (367)
T 2p2w_A 12 CESSICYLDGINGRLYYRGIPVEELAEKS-TFEETAYFLWYGKLPTKSELEEFKRKMADY---RELPAE--ALGILYHLP 85 (367)
T ss_dssp CCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CCCCHH--HHHHHTTSC
T ss_pred eeeeCeEEECCCCEEEECCeeHHHHHcCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHc---cCCCHH--HHHHHHhCc
Confidence 3456665555 46999999999999887 999999999999999988888888766543 333333 2223323
Q ss_pred cCCChHHHHHHhhhccCC
Q 014132 251 AGKDLVSSLVSGLLTIGP 268 (430)
Q Consensus 251 t~a~~~~av~Agl~a~Gp 268 (430)
..++|-..+.+++++++.
T Consensus 86 ~~~hpM~~l~~~v~~l~~ 103 (367)
T 2p2w_A 86 KNLHYIDVLKIFLSIHGS 103 (367)
T ss_dssp SCCCHHHHHHHHHSCC--
T ss_pred cCCChHHHHHHHHHHHhc
Confidence 346888888888888754
No 32
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=94.22 E-value=0.095 Score=52.88 Aligned_cols=87 Identities=15% Similarity=0.103 Sum_probs=61.2
Q ss_pred HHHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhcc
Q 014132 174 HIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA 251 (430)
Q Consensus 174 a~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt 251 (430)
+..|.|+...| ..+.|||+++.+|..+. +|.++.++||+|.-|+.++.+.+...|.- |..-+.. ..++..+-
T Consensus 12 ~~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~---~~~lp~~--~~~~~~~~ 85 (377)
T 1iom_A 12 FTESRMCYIDGQQGKLYYYGIPIQELAEKS-SFEETTFLLLHGRLPRRQELEEFSAALAR---RRALPAH--LLESFKRY 85 (377)
T ss_dssp CSCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHH---TCSCCHH--HHHHHTTS
T ss_pred eeeeeCeEEECCCCEEEEcCeeHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHH---cCCCCHH--HHHHHHhC
Confidence 34456665555 35899999999999887 99999999999999998888888876654 4333333 22333332
Q ss_pred --CCChHHHHHHhhhcc
Q 014132 252 --GKDLVSSLVSGLLTI 266 (430)
Q Consensus 252 --~a~~~~av~Agl~a~ 266 (430)
.++|-..+.++++++
T Consensus 86 p~~~hpM~~l~~~v~~l 102 (377)
T 1iom_A 86 PVSAHPMSFLRTAVSEF 102 (377)
T ss_dssp CTTSCHHHHHHHHHHHH
T ss_pred CcCCCchhHHHHHHHHH
Confidence 467766666666665
No 33
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=94.21 E-value=0.081 Score=53.68 Aligned_cols=104 Identities=21% Similarity=0.272 Sum_probs=70.2
Q ss_pred HHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEe--eccCChhHH--HHHHHHHcCCCCCCEEEEec
Q 014132 5 LYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVL--GELGGRDEY--SLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 5 i~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~--gE~~~~~E~--~~a~~~~~~~~~KPvv~~~~ 80 (430)
.++.+...|...+..+.+||++- --.+.++++.+.+||++++|++. |-+....+. -..+.++..+.+||||+.+.
T Consensus 263 t~D~i~~~G~~~aN~lD~gG~a~-~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~ 341 (397)
T 3ufx_B 263 TLDLVNRVGGKPANFLDIGGGAK-ADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341 (397)
T ss_dssp HHHHHHHTTCCBSEEEECCSCCC-HHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEE
T ss_pred HHHHHHHcCCCcCCcEecCCCCC-HHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEcc
Confidence 45788889999999999999873 34699999999999999999862 322222221 11233333234899999998
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHH
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAI 132 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~ 132 (430)
|...+ . -.+.|++.|++..+++++-...+
T Consensus 342 G~~~~---~--------------------~~~~l~~~gip~~~~~e~Aa~~~ 370 (397)
T 3ufx_B 342 GTAEE---E--------------------AKKLLEGKPVYMYPTSIEAAKVT 370 (397)
T ss_dssp EECHH---H--------------------HHHHTTTSSEEECSSHHHHHHHH
T ss_pred CCCHH---H--------------------HHHHHHhCCCcccCCHHHHHHHH
Confidence 85331 1 22466778888888887554443
No 34
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=93.90 E-value=0.04 Score=56.68 Aligned_cols=87 Identities=15% Similarity=0.079 Sum_probs=61.3
Q ss_pred HHHhhccCCCC--cccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhh--c
Q 014132 175 IISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTA--R 250 (430)
Q Consensus 175 ~~~~i~~~~g~--~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~a--S 250 (430)
..+.|+...|+ .+.|||+++.+|.++. +|.++.|+||+|.-|++++.+.|+..|. .|..-+.. ...+.. -
T Consensus 60 ~~S~Is~idg~~G~L~YRGy~I~dLa~~~-~feEvayLLl~G~LPt~~el~~f~~~l~---~~~~lp~~--v~~~~~~~p 133 (436)
T 2h12_A 60 CNSKITFIDGDKGVLLHRGYPIAQLAENA-SYEEVIYLLLNGELPNKAQYDTFTNTLT---NHTLLHEQ--IRNFFNGFR 133 (436)
T ss_dssp EEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCSCCGG--GHHHHTTSC
T ss_pred eeeeceEEeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---hccCCCHH--HHHHHHhCC
Confidence 34566655544 6799999999999988 9999999999999999888888887655 44433333 222322 2
Q ss_pred cCCChHHHHHHhhhccC
Q 014132 251 AGKDLVSSLVSGLLTIG 267 (430)
Q Consensus 251 t~a~~~~av~Agl~a~G 267 (430)
..++|-..+.+++++++
T Consensus 134 ~~~hPM~~l~~~v~aL~ 150 (436)
T 2h12_A 134 RDAHPMAILCGTVGALS 150 (436)
T ss_dssp TTCCHHHHHHHHHHHHG
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 33677777777776654
No 35
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=93.47 E-value=0.44 Score=48.78 Aligned_cols=85 Identities=11% Similarity=-0.009 Sum_probs=62.5
Q ss_pred HhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhcc--C
Q 014132 177 STISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA--G 252 (430)
Q Consensus 177 ~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt--~ 252 (430)
+.|+...| ..+.||||++.+|..+. +|.+++|+||+|.-|+.++.+.|..-|.- |..-+.. ..++..+- .
T Consensus 54 s~is~iDg~~G~L~YRGy~I~dLa~~~-~feevayLLl~G~LPt~~el~~f~~~l~~---~~~lp~~--~~~~~~~~p~~ 127 (426)
T 3l96_A 54 SKITFIDGDEGILLHRGFPIDQLATDS-NYLEVCYILLNGEKPTQEQYDEFKTTVTR---HTMIHEQ--ITRLFHAFRRD 127 (426)
T ss_dssp ESSEEEEGGGTEEEETTEEHHHHHHHS-CHHHHHHHHHHSSCCCHHHHHHHHHHHHH---TCSCCHH--HHHHHTTSCTT
T ss_pred EEeEEEECCCCEEEECCeEHHHHHhcC-CHHHHHHHHHCCcCCCHHHHHHHHHHHHH---ccCCCHH--HHHHHHhcCCC
Confidence 34443334 35789999999998887 99999999999998988888888886644 4433333 44455444 4
Q ss_pred CChHHHHHHhhhccC
Q 014132 253 KDLVSSLVSGLLTIG 267 (430)
Q Consensus 253 a~~~~av~Agl~a~G 267 (430)
++|-..+.+++++++
T Consensus 128 ~hPM~~l~~~vsaL~ 142 (426)
T 3l96_A 128 SHPMAVMCGITGALA 142 (426)
T ss_dssp SCHHHHHHHHHTTGG
T ss_pred CCHHHHHHHHHHHHH
Confidence 788888888888875
No 36
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=92.84 E-value=0.08 Score=53.43 Aligned_cols=86 Identities=12% Similarity=0.101 Sum_probs=60.3
Q ss_pred HHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhc--
Q 014132 175 IISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR-- 250 (430)
Q Consensus 175 ~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aS-- 250 (430)
..|.|+...| ..+.|||+++.+|..+. +|.++.|+||+|.-|++++.+.+...|. .|..-+.. ..++..+
T Consensus 14 ~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~feeva~LL~~G~lPt~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p 87 (377)
T 1o7x_A 14 KVTNLTFIDGEKGILRYRGYNIEDLVNYG-SYEETIYLMLYGKLPTKKELNDLKAKLN---EEYEVPQE--VLDTIYLMP 87 (377)
T ss_dssp EEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TCCCCCHH--HHHHHHHSC
T ss_pred eeeeCeEEECCCCEEEECCccHHHHHcCC-CHHHHHHHHHCCCCcCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCc
Confidence 3455665544 35899999999999987 9999999999999999888888887554 44443333 2223322
Q ss_pred cCCChHHHHHHhhhcc
Q 014132 251 AGKDLVSSLVSGLLTI 266 (430)
Q Consensus 251 t~a~~~~av~Agl~a~ 266 (430)
..++|-..+.++++++
T Consensus 88 ~~~hpM~~l~~~v~~l 103 (377)
T 1o7x_A 88 KEADAIGLLEVGTAAL 103 (377)
T ss_dssp TTSCHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHHH
Confidence 3467777777776665
No 37
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=92.48 E-value=0.093 Score=52.70 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=69.6
Q ss_pred HHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhh--cc
Q 014132 176 ISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTA--RA 251 (430)
Q Consensus 176 ~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~a--St 251 (430)
.|.|+...| ..+.|||+++.+|..+. +|.++.++||+|.-|+.++.+.+...|.-+. .-+.. ..++.. -.
T Consensus 12 ~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LL~~G~lP~~~el~~f~~~l~~~~---~lp~~--~~~~~~~~p~ 85 (363)
T 2c6x_A 12 ETSISHIDGEKGRLIYRGHHAKDIALNH-SFEEAAYLILFGKLPSTEELQVFKDKLAAER---NLPEH--IERLIQSLPN 85 (363)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHHS-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHT---SCCHH--HHHHHHHSCS
T ss_pred eeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc---CCCHH--HHHHHHhCcc
Confidence 455665555 35899999999999887 9999999999999999888888888766543 22222 222332 23
Q ss_pred CCChHHHHHHhhhccCC-Cc--cCchHHHHHHHHHH
Q 014132 252 GKDLVSSLVSGLLTIGP-RF--GGAIDDAARYFKDA 284 (430)
Q Consensus 252 ~a~~~~av~Agl~a~Gp-~h--GGa~~~a~~~l~~~ 284 (430)
.++|-..+.+++++++. .. -...+.+++++..+
T Consensus 86 ~~hpM~~l~~~v~~l~~~~~~~~~~~~~a~~Lia~~ 121 (363)
T 2c6x_A 86 NMDDMSVLRTVVSALGENTYTFHPKTEEAIRLIAIT 121 (363)
T ss_dssp SSCHHHHHHHHHHHHCCSSCCSSCCHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Confidence 46788888888888743 21 12234466666654
No 38
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=92.47 E-value=0.089 Score=52.98 Aligned_cols=85 Identities=12% Similarity=0.125 Sum_probs=59.8
Q ss_pred HHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhcc--
Q 014132 176 ISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA-- 251 (430)
Q Consensus 176 ~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt-- 251 (430)
.|.|+...| ..+.|||+++.+|..+. +|.++.++||+|.-|+.++.+.+...|. .|..-+.. ..++..+-
T Consensus 12 ~t~Is~id~~~G~L~YRGy~i~~La~~~-~fEeva~LLl~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p~ 85 (371)
T 1aj8_A 12 QTNICYIDGKEGKLYYRGYSVEELAELS-TFEEVVYLLWWGKLPSLSELENFKKELA---KSRGLPKE--VIEIMEALPK 85 (371)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHHHHSCT
T ss_pred eeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCCCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCCC
Confidence 355655555 35899999999999887 9999999999999999888888887654 44443333 22233332
Q ss_pred CCChHHHHHHhhhcc
Q 014132 252 GKDLVSSLVSGLLTI 266 (430)
Q Consensus 252 ~a~~~~av~Agl~a~ 266 (430)
.++|-..+.++++++
T Consensus 86 ~~hpM~~l~~~v~~l 100 (371)
T 1aj8_A 86 NTHPMGALRTIISYL 100 (371)
T ss_dssp TCCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHH
Confidence 467766666666665
No 39
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=92.26 E-value=0.094 Score=52.91 Aligned_cols=87 Identities=11% Similarity=0.060 Sum_probs=61.5
Q ss_pred HHHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhcc
Q 014132 174 HIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA 251 (430)
Q Consensus 174 a~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt 251 (430)
+..|.|+...| ..+.|||+++.+|..+. +|.++.++||+|.-|+.++.+.+...|. .|..-+.. ..++..+-
T Consensus 14 ~~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~~~~ 87 (378)
T 1a59_A 14 ADVTAISKVNSDTNSLLYRGYPVQELAAKC-SFEQVAYLLWNSELPNDSELKAFVNFER---SHRKLDEN--VKGAIDLL 87 (378)
T ss_dssp CCCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TSCSCCHH--HHHHHTTS
T ss_pred eeeeeceEEECCCCeEEEcCccHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---HcCCCCHH--HHHHHHhC
Confidence 34566665555 35999999999999887 9999999999999999888888887654 44443333 23333232
Q ss_pred --CCChHHHHHHhhhcc
Q 014132 252 --GKDLVSSLVSGLLTI 266 (430)
Q Consensus 252 --~a~~~~av~Agl~a~ 266 (430)
.++|-..+.++++++
T Consensus 88 p~~~hpM~~l~~~v~~l 104 (378)
T 1a59_A 88 STACHPMDVARTAVSVL 104 (378)
T ss_dssp CTTSCHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHH
Confidence 467776676666665
No 40
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=92.01 E-value=0.1 Score=52.60 Aligned_cols=86 Identities=12% Similarity=0.072 Sum_probs=60.3
Q ss_pred HHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhcc-
Q 014132 175 IISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA- 251 (430)
Q Consensus 175 ~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt- 251 (430)
..|.|+...| ..+.|||+++.+|..+. +|.++.++||+|.-|+.++.+.+...|. .|..-+.. ..++..+-
T Consensus 15 ~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LL~~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p 88 (378)
T 1vgm_A 15 KTTGLTYIDGINGILRYRGYDINDLVNYA-SYEELIHLMLYGELPNRQQLNQIKGIIN---ESFEVPEQ--VISTIFSMP 88 (378)
T ss_dssp EEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TCCCCCHH--HHHHHTTSC
T ss_pred eeeeceEEECCCCeEEEcCeeHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCC
Confidence 3455665555 35899999999999887 9999999999999998888888887555 44433333 22233222
Q ss_pred -CCChHHHHHHhhhcc
Q 014132 252 -GKDLVSSLVSGLLTI 266 (430)
Q Consensus 252 -~a~~~~av~Agl~a~ 266 (430)
.++|-..+.++++++
T Consensus 89 ~~~hpM~~l~~~v~~l 104 (378)
T 1vgm_A 89 RNCDAIGMMETAFGIL 104 (378)
T ss_dssp TTSCHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHH
Confidence 467777676666665
No 41
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=91.47 E-value=0.12 Score=53.17 Aligned_cols=97 Identities=13% Similarity=0.036 Sum_probs=69.2
Q ss_pred cchhhHHHHHHhhccCCCCc-ccccCCCcchhhhcc--------CCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCC
Q 014132 167 GKVRAPTHIISTISDDRGEE-PCYAGVPMSSIVEQG--------YGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGP 237 (430)
Q Consensus 167 ak~p~i~a~~~~i~~~~g~~-~~~~g~dl~~li~~~--------~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~ 237 (430)
+-+..+++..+.|+...|+. +.||||++.+|.++. -+|.+++|+||+|.-|++++.+.++..|.-+. .
T Consensus 41 ~Gl~g~~~~~t~Is~id~~~Gl~YRGy~I~dLa~~~~~~~~~~~~~feev~yLLl~G~LPt~~el~~f~~~l~~~~---~ 117 (435)
T 1csh_A 41 GGMRGMKGLIYETSVLDPDEGIRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLVTGQIPTPEQVSWVSKEWAKRA---A 117 (435)
T ss_dssp TTTTTCCCCCCCSEEEETTTEEEETTEEHHHHHHHSCBCTTCCSBCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHC---C
T ss_pred cCcCCCeeeeeeeeEEcCCCCeeECCccHHHHHhhCcccccCCcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHcc---C
Confidence 44556667778887665433 899999999998863 15999999999999999999888888766543 3
Q ss_pred CCcchhHHHHhhc--cCCChHHHHHHhhhccCC
Q 014132 238 CVSGAHNTIVTAR--AGKDLVSSLVSGLLTIGP 268 (430)
Q Consensus 238 ~~St~~aar~~aS--t~a~~~~av~Agl~a~Gp 268 (430)
-+. ++..+..+ ..++|-..+.+++++++.
T Consensus 118 lp~--~v~~~i~~~p~~~hPM~~l~~~v~aL~~ 148 (435)
T 1csh_A 118 LPS--HVVTMLDNFPTNLHPMSQLSAAITALNS 148 (435)
T ss_dssp CCH--HHHHHHHHSCTTSCHHHHHHHHHHHGGG
T ss_pred CCH--HHHHHHHhCCccCChHHHHHHHHHHHhh
Confidence 333 23334333 345787788888888754
No 42
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=91.39 E-value=0.13 Score=52.08 Aligned_cols=87 Identities=8% Similarity=0.006 Sum_probs=60.3
Q ss_pred HHHHhhccCCC--CcccccCCCcchhhh-ccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhc
Q 014132 174 HIISTISDDRG--EEPCYAGVPMSSIVE-QGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR 250 (430)
Q Consensus 174 a~~~~i~~~~g--~~~~~~g~dl~~li~-~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aS 250 (430)
+..|.|+...| ..+.|||+++.+|.. +. +|.++.|+||+|.-|+.++.+.+..-|.-+ ..-+.. ..++..+
T Consensus 16 ~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~~~ 89 (385)
T 2ifc_A 16 IKWTRLTTIDGNKGILRYGGYSVEDIIASGA-QDEEIQYLFLYGNLPTEQELRKYKETVQKG---YKIPDF--VINAIRQ 89 (385)
T ss_dssp EEEESSEEEETTTTEEEETTEEHHHHHHTTC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHGG---GCCCHH--HHHHHHT
T ss_pred eeeeeCeEEECCCCEEEECCccHHHHHhcCC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHc---cCCCHH--HHHHHHh
Confidence 34456665555 358999999999998 66 999999999999999988888888766543 332222 2223322
Q ss_pred --cCCChHHHHHHhhhcc
Q 014132 251 --AGKDLVSSLVSGLLTI 266 (430)
Q Consensus 251 --t~a~~~~av~Agl~a~ 266 (430)
..++|-..+.++++++
T Consensus 90 ~p~~~hpM~~l~~~v~~l 107 (385)
T 2ifc_A 90 LPRESDAVAMQMAAVAAM 107 (385)
T ss_dssp SCTTSCHHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHH
Confidence 2467766666666665
No 43
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=90.78 E-value=1.1 Score=46.13 Aligned_cols=98 Identities=17% Similarity=0.172 Sum_probs=64.7
Q ss_pred eEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEeeccC----C--hh-HHHHHHHHHcCCCCCCEEEEecCCccccccc
Q 014132 17 YEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG----G--RD-EYSLVEALKQGKVNKPVVAWVSGTCARLFKS 89 (430)
Q Consensus 17 S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~gE~~----~--~~-E~~~a~~~~~~~~~KPvv~~~~G~~~~~~p~ 89 (430)
.-.|-+|++.- ...+.++++.+.+||++++|++..-++ . .. .+...+.+++...+||||++..+.+.
T Consensus 342 ~NPlDl~g~a~-~~~~~~al~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~----- 415 (457)
T 2csu_A 342 KNPVDMIASAR-GEDYYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYV----- 415 (457)
T ss_dssp SSEEECCTTCC-HHHHHHHHHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTT-----
T ss_pred CCCeeCCCCCC-HHHHHHHHHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcc-----
Confidence 34677777641 245889999999999999998866432 1 11 23345555431267999996544222
Q ss_pred ccccccccccccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHH
Q 014132 90 EVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 137 (430)
Q Consensus 90 g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~ 137 (430)
. +.-.+.|+++|+++.+++++-...+..+.+
T Consensus 416 ----------------~-~~~~~~L~~~Gip~~~spe~Av~al~~l~~ 446 (457)
T 2csu_A 416 ----------------S-EKAKELLEKNGIPTYERPEDVASAAYALVE 446 (457)
T ss_dssp ----------------T-HHHHHHHHTTTCCEESSHHHHHHHHHHHHH
T ss_pred ----------------h-HHHHHHHHhCCCCccCCHHHHHHHHHHHHH
Confidence 0 113457889999999999988877776654
No 44
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=90.64 E-value=0.18 Score=51.46 Aligned_cols=91 Identities=14% Similarity=0.063 Sum_probs=61.8
Q ss_pred hHHHHHHhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHh
Q 014132 171 APTHIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 248 (430)
Q Consensus 171 ~i~a~~~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~ 248 (430)
.+++..|.|+...| ..+.|||+++.+|..+. +|.++.|+||+|.-|+.++.+.+...|.-+. .-+.. ...+.
T Consensus 28 gv~~~~t~Is~idg~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~~---~lp~~--~~~~~ 101 (409)
T 2ibp_A 28 DVLIKSTSISDIDGEKGILWYRGYRIEELARLS-TYEEVSYLILYGRLPTKRELEDYINRMKKYR---ELHPA--TVEVI 101 (409)
T ss_dssp TCEEEEECSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHT---SCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc---CCCHH--HHHHH
Confidence 33344566665555 35999999999999887 9999999999999999888888888766543 22232 22222
Q ss_pred hccCC-ChHHHHHHhhhccC
Q 014132 249 ARAGK-DLVSSLVSGLLTIG 267 (430)
Q Consensus 249 aSt~a-~~~~av~Agl~a~G 267 (430)
.+-.. +|-..+.+++++++
T Consensus 102 ~~~p~~hPM~~l~~~v~aL~ 121 (409)
T 2ibp_A 102 RNLAKAHPMFALEAAVAAEG 121 (409)
T ss_dssp HHTTTSCHHHHHHHHHHHHH
T ss_pred HhCCccCchHHHHHHHHHHh
Confidence 22211 67666777776654
No 45
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=89.87 E-value=0.41 Score=49.02 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=61.2
Q ss_pred HhhccCCC--CcccccCCCcchhhhccCCHHHHHHHhhhCCCCchhHHHHHHHHHHHhccCCCCCcchhHHHHhhcc--C
Q 014132 177 STISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA--G 252 (430)
Q Consensus 177 ~~i~~~~g--~~~~~~g~dl~~li~~~~s~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg~~~St~~aar~~aSt--~ 252 (430)
+.|+...| ..+.||||++.+|..+. +|.++.|+||+|.-|+.++.+.|..-|.-+ ..-+.. ..++..+- .
T Consensus 63 s~is~iDg~~G~L~YRGy~I~dLa~~~-~feevayLLl~G~LPt~~el~~f~~~l~~~---~~lp~~--~~~~i~~~p~~ 136 (427)
T 3msu_A 63 SKITYIDGGKGVLLHRGYPIEEWTQKS-NYRTLCYALIYGELPTDEQVKSFRQEIINK---MPVCEH--VKAAIAAMPQH 136 (427)
T ss_dssp ESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHH---CCCCHH--HHHHHHHSCTT
T ss_pred EEeeEEeCCCCEEEECCeEHHHHhccC-CHHHHHHHHHcCcCCCHHHHHHHHHHHHHc---cCCCHH--HHHHHHhCCCC
Confidence 44554444 35799999999998887 999999999999989888888888866544 333333 44454443 3
Q ss_pred CChHHHHHHhhhccC
Q 014132 253 KDLVSSLVSGLLTIG 267 (430)
Q Consensus 253 a~~~~av~Agl~a~G 267 (430)
++|-..+.+++++++
T Consensus 137 ~hPM~~L~~~v~aL~ 151 (427)
T 3msu_A 137 THPMSSLIAGVNVLA 151 (427)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 577778888777764
No 46
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=88.22 E-value=3.5 Score=41.47 Aligned_cols=106 Identities=17% Similarity=0.190 Sum_probs=68.6
Q ss_pred HHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEEe--eccCChhHH--HHHHHHHcCCCCCCEEEEec
Q 014132 5 LYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVL--GELGGRDEY--SLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 5 i~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl~--gE~~~~~E~--~~a~~~~~~~~~KPvv~~~~ 80 (430)
.++.+...|.=..-++-+||.+- .-.+.++++.+.+||+.++|++. |=+....+. -..+.+++...+||||+-..
T Consensus 272 t~D~i~~~Gg~~aNflD~gG~a~-~~~~~~~~~~il~d~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl~ 350 (388)
T 2nu8_B 272 TMDIVKLHGGEPANFLDVGGGAT-KERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350 (388)
T ss_dssp HHHHHHHTTCCBCEEEECCSCCC-HHHHHHHHHHHHTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEE
T ss_pred hhHHHHHcCCCcCceeEecCCCC-HHHHHHHHHHHhcCCCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 35667777766677888888763 34567889999999999999884 433332221 11334443247899999776
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCccc--CChHHHHHHHHH
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP--TSYEAFESAIKE 134 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~--~~~~~l~~~~~~ 134 (430)
|...+ .-.+.|++.|+++. +++++..+.+.+
T Consensus 351 G~n~~-----------------------~g~~~l~~~g~~~~~~~~~~~aa~~~v~ 383 (388)
T 2nu8_B 351 GNNAE-----------------------LGAKKLADSGLNIIAAKGLTDAAQQVVA 383 (388)
T ss_dssp STTHH-----------------------HHHHHHHTTCSSEEECSSHHHHHHHHHH
T ss_pred CCCHH-----------------------HHHHHHHHCCCceecCCCHHHHHHHHHH
Confidence 65441 12457777888877 777766554433
No 47
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=88.03 E-value=2.2 Score=43.05 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=69.7
Q ss_pred HHHHHHhcCCCeeEEEEecCCccCCCCHHHHHHHhhcCCCccEEEE--eeccCChhHH--HHHHHHHcCCCCCCEEEEec
Q 014132 5 LYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVV--LGELGGRDEY--SLVEALKQGKVNKPVVAWVS 80 (430)
Q Consensus 5 i~~~~~~~g~G~S~~i~~Ggd~i~g~~~~d~l~~l~~Dp~T~~Ivl--~gE~~~~~E~--~~a~~~~~~~~~KPvv~~~~ 80 (430)
.++.+...|.=..-++-+||.+- .-.+.++++.+.+||+.++|++ +|=+-...+. -..+.+++...+||||+...
T Consensus 279 t~D~i~~~Gg~paNflDvgG~a~-~e~~~~al~~il~d~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl~ 357 (395)
T 2fp4_B 279 TCDIIFLNGGKPANFLDLGGGVK-ESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 357 (395)
T ss_dssp HHHHHHHTTCCBCEEEECCSSCC-HHHHHHHHHHHHHCTTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEEE
T ss_pred HHHHHHHcCCCcCCcEEECCCCC-HHHHHHHHHHHhCCCCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEcC
Confidence 45677777766778888888763 3456778999999999999975 4544443321 11333443236899999776
Q ss_pred CCcccccccccccccccccccCCcCcHHHHHHHHHHCCCccc--CChHHHHHHHHH
Q 014132 81 GTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP--TSYEAFESAIKE 134 (430)
Q Consensus 81 G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv~~~--~~~~~l~~~~~~ 134 (430)
|... +.-.+.|++.|+++. +++++-.+.+.+
T Consensus 358 G~n~-----------------------~~g~~~L~~~gl~~~~~~~~~~Aa~~~v~ 390 (395)
T 2fp4_B 358 GTNV-----------------------HEAQNILTNSGLPITSAVDLEDAAKKAVA 390 (395)
T ss_dssp ETTH-----------------------HHHHHHHHHTCSCCEECSSHHHHHHHHHH
T ss_pred CCCH-----------------------HHHHHHHHHCCCceEeCCCHHHHHHHHHH
Confidence 6443 113457788888777 777766554443
No 48
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=84.44 E-value=0.64 Score=43.58 Aligned_cols=55 Identities=22% Similarity=0.227 Sum_probs=37.8
Q ss_pred CCHHHHHHHhhcCCCccEEEEeeccCChh--H-HHHHHHHHcC-C-CCCCEEEEecCCcc
Q 014132 30 STLSDHILRFNNIPQVKMMVVLGELGGRD--E-YSLVEALKQG-K-VNKPVVAWVSGTCA 84 (430)
Q Consensus 30 ~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~--E-~~~a~~~~~~-~-~~KPvv~~~~G~~~ 84 (430)
..+.+.|+.+.+||+.++|++.+..+|-. + .+..+.++.- + .+||||+++.|...
T Consensus 32 ~~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~~~i~~~l~~~~~~~~kPVia~v~g~a~ 91 (240)
T 3rst_A 32 RTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAA 91 (240)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEEECCBCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEECCeeh
Confidence 35677788888899999999998875532 1 2223333321 2 48999999988655
No 49
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=82.79 E-value=2.6 Score=39.87 Aligned_cols=54 Identities=15% Similarity=0.322 Sum_probs=35.7
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCC------h-------hHHHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGG------R-------DEYSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~------~-------~E~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||++++||+.|++++ . ...+. .+++. -...+||||+.+-|..-
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 114 (265)
T 3kqf_A 40 ELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIAL 114 (265)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 35677788888999999999998732 0 01111 11211 12579999999988655
No 50
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=81.30 E-value=6.2 Score=40.87 Aligned_cols=89 Identities=24% Similarity=0.278 Sum_probs=55.0
Q ss_pred CCHHHHHHHhhcCCCccEEEE--eeccC---ChhHHHHHHHH----HcCCCCCC--EEEEecCCcccccccccccccccc
Q 014132 30 STLSDHILRFNNIPQVKMMVV--LGELG---GRDEYSLVEAL----KQGKVNKP--VVAWVSGTCARLFKSEVQFGHAGA 98 (430)
Q Consensus 30 ~~~~d~l~~l~~Dp~T~~Ivl--~gE~~---~~~E~~~a~~~----~~~~~~KP--vv~~~~G~~~~~~p~g~~~gHaga 98 (430)
..+.++|+.+.+||++.+|++ +--++ .+.+ +.++-+ +....+|| +++++.|.... |
T Consensus 314 ~~~~~al~~~l~D~~vd~vlv~~v~~~~~~~d~~~-~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~--~---------- 380 (480)
T 3dmy_A 314 TLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAA-SLVSAWQKACAARLDNQPLYAIATVTGTERD--P---------- 380 (480)
T ss_dssp HHHHHHHHHGGGCTTEEEEEEEEECSTTSCSCHHH-HHHHHHHHHHHTSCTTSCCEEEEEEESCTTS--T----------
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeecCCCCCCChHH-HHHHHHHHHHHhccCCCCeEEEEEecCcccc--h----------
Confidence 458999999999999999987 31111 1112 223322 22112699 55565554321 1
Q ss_pred cccCCcCcHHHHHHHHHHCCCcccCChHHHHHHHHHHHH
Q 014132 99 KSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 137 (430)
Q Consensus 99 i~~~~~g~~~~k~~~l~~~Gv~~~~~~~~l~~~~~~~~~ 137 (430)
...+.-.+.|+++||++.+++++-...+..+++
T Consensus 381 ------~~~~~~~~~L~~aGIp~f~spe~Av~a~~~l~~ 413 (480)
T 3dmy_A 381 ------QCRSQQIATLEDAGIAVVSSLPEATLLAAALIH 413 (480)
T ss_dssp ------TCHHHHHHHHHHTTCEECSSHHHHHHHHHHHTS
T ss_pred ------hhHHHHHHHHHhCCCcccCCHHHHHHHHHHHHh
Confidence 111123468999999999999988777776654
No 51
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=78.75 E-value=3.1 Score=39.44 Aligned_cols=53 Identities=15% Similarity=0.249 Sum_probs=34.5
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC------Chh-H------HHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG------GRD-E------YSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~------~~~-E------~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|+.+ ..- | .+. .+++. -...+||||+.+-|...
T Consensus 44 L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 117 (272)
T 1hzd_A 44 LSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLAL 117 (272)
T ss_dssp HHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEESEEEE
T ss_pred HHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEeCceEE
Confidence 456777788899999999999864 110 0 011 11111 12578999999988655
No 52
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=78.60 E-value=2.1 Score=40.42 Aligned_cols=53 Identities=19% Similarity=0.138 Sum_probs=36.6
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h--H----------HHHHHH-------HH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D--E----------YSLVEA-------LK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~--E----------~~~a~~-------~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++... . | .+..++ +. -...+||||+.+.|...
T Consensus 36 L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 113 (263)
T 3lke_A 36 LLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAY 113 (263)
T ss_dssp HHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEE
T ss_pred HHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEee
Confidence 56778888889999999999986544 0 1 111111 11 12578999999998766
No 53
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=76.37 E-value=4 Score=38.28 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=36.0
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCChh-------------HHHHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGGRD-------------EYSLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~-------------E~~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||+.++||+.|++.... .....+++. -...+||||+.+.|...
T Consensus 37 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 104 (255)
T 3p5m_A 37 ELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAADAANRVVRAITSLPKPVIAGVHGAAV 104 (255)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHHHHHHHHHHHHHHHHHCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcchHHHHHHHHHHHHHHhCCCCEEEEeCCeeh
Confidence 3667788888999999999999863210 011122222 11478999999988655
No 54
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=76.00 E-value=4.1 Score=40.35 Aligned_cols=53 Identities=15% Similarity=0.208 Sum_probs=36.3
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC------h-hH---------HHHHHHHH--------cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG------R-DE---------YSLVEALK--------QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~------~-~E---------~~~a~~~~--------~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++++ . .| .+..++.. -...+||||+.+-|-.-
T Consensus 41 l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~ 117 (353)
T 4hdt_A 41 MAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVM 117 (353)
T ss_dssp HHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEE
T ss_pred HHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCCCEEEEeECcee
Confidence 5678888999999999999998753 0 01 11122211 11478999999988655
No 55
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=73.78 E-value=5.1 Score=37.51 Aligned_cols=53 Identities=23% Similarity=0.297 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-HH--------------HHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-EY--------------SLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E~--------------~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++... - |. ...+++. -...+||||+.+.|..-
T Consensus 38 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 111 (256)
T 3qmj_A 38 TAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAVNGLGV 111 (256)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHHHCCSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeh
Confidence 56778888899999999999976311 0 10 1112221 11478999999998765
No 56
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=73.25 E-value=4.2 Score=39.01 Aligned_cols=24 Identities=13% Similarity=0.144 Sum_probs=20.6
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG 55 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~ 55 (430)
+.++++.+.+||+.++||+.|+.+
T Consensus 40 L~~al~~~~~d~~vr~vVltg~g~ 63 (287)
T 3gkb_A 40 LRTVLTTLADDSSVRVIVFSSADP 63 (287)
T ss_dssp HHHHHHHHHTCTTCCEEEEEESSS
T ss_pred HHHHHHHHHcCCCeeEEEEecCCC
Confidence 567788888999999999999864
No 57
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=73.21 E-value=4.2 Score=38.59 Aligned_cols=51 Identities=29% Similarity=0.456 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-----Chh--H-----------------HHHHHHHHcCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-----GRD--E-----------------YSLVEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-----~~~--E-----------------~~~a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++. |-. | .+..+.+. ..+||||+.+-|...
T Consensus 45 L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~kPvIAav~G~a~ 119 (273)
T 2uzf_A 45 MIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIR--IIPKPVIAMVKGYAV 119 (273)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CCSSSCCCTHHHHHHHHH--HSSSCEEEEECEEEE
T ss_pred HHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchhhhHHHhhHHHHHHHHH--hCCCCEEEEECCEEe
Confidence 556777788899999999999865 000 0 01122222 478999999988655
No 58
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=73.19 E-value=4.5 Score=38.15 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=35.3
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCChhH-HHHHHH------------------HH-c-CCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGGRDE-YSLVEA------------------LK-Q-GKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E-~~~a~~------------------~~-~-~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||++++||+.|++....- -|..++ +. - ...+||||+.+.|...
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~ 114 (265)
T 3swx_A 40 ELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVHGKVL 114 (265)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CCCCCTTCCCTTCCSSCCCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeee
Confidence 35677888888999999999998742110 011111 11 1 3578999999988655
No 59
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=72.85 E-value=4.2 Score=38.19 Aligned_cols=53 Identities=21% Similarity=0.256 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh-HHHHHHH------------------HH-c-CCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD-EYSLVEA------------------LK-Q-GKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~-E~~~a~~------------------~~-~-~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++.... =.|..++ +. - ...+||||+.+-|..-
T Consensus 44 l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~ 117 (258)
T 3lao_A 44 LALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCW 117 (258)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTSCSSSCCCSCEEEEECSEEE
T ss_pred HHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeE
Confidence 567778888899999999999873110 0011111 11 1 3578999999988765
No 60
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=72.68 E-value=5.2 Score=37.59 Aligned_cols=53 Identities=17% Similarity=0.268 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC---------------hhHH-H----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG---------------RDEY-S----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~---------------~~E~-~----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|+.++ ..+. + ..+++. -...+||||+.+.|...
T Consensus 36 L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 109 (260)
T 1sg4_A 36 LVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACP 109 (260)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECEEBC
T ss_pred HHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeee
Confidence 5677778888999999999998421 1110 0 111121 12578999999988655
No 61
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=72.51 E-value=4.9 Score=38.59 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC------hh-H--------HH-------HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG------RD-E--------YS-------LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~------~~-E--------~~-------~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++++ .- + .. ..+++. -...+||||+.+.|...
T Consensus 60 L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~ 135 (289)
T 3t89_A 60 MIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSI 135 (289)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC----------------CTHHHHHHHHHHCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEECCEee
Confidence 5677788888999999999998751 00 0 00 111211 11478999999988665
No 62
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=71.74 E-value=4.3 Score=39.92 Aligned_cols=24 Identities=17% Similarity=0.155 Sum_probs=20.5
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG 55 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~ 55 (430)
+.++|+.+.+||+.++||+.|+++
T Consensus 89 L~~al~~~~~d~~vrvVVltG~G~ 112 (334)
T 3t8b_A 89 LYRVLDHARMSPDVGVVLLTGNGP 112 (334)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCC
T ss_pred HHHHHHHHHhCCCceEEEEeCCCC
Confidence 556777888899999999999875
No 63
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=71.54 E-value=7.7 Score=36.29 Aligned_cols=53 Identities=21% Similarity=0.345 Sum_probs=34.0
Q ss_pred HHHHHHHhhcCCCccEEEEeecc-----CChh-HHH-----HH------HHH-HcCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL-----GGRD-EYS-----LV------EAL-KQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~-----~~~~-E~~-----~a------~~~-~~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++ |..- |.. .. +.+ +-...+||||+.+.|...
T Consensus 37 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 107 (258)
T 2pbp_A 37 IVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLAL 107 (258)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHHHTCCSCEEEEECSEEE
T ss_pred HHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHhCCCCEEEEEcCEEE
Confidence 45677788889999999999973 1111 100 01 111 112578999999988655
No 64
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=71.11 E-value=5.2 Score=38.16 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh------H------HHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD------E------YSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~------E------~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.... | .+. .+++. -...+||||+.+.|...
T Consensus 55 L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 127 (277)
T 4di1_A 55 IVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYAL 127 (277)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEe
Confidence 567788888899999999999843110 1 111 11111 11478999999988655
No 65
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=70.87 E-value=4.6 Score=38.68 Aligned_cols=53 Identities=15% Similarity=0.205 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC-------------hhHHHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG-------------RDEYSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~-------------~~E~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.. ...... .+++. -...+||||+.+.|..-
T Consensus 58 L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 131 (286)
T 3myb_A 58 LGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIAT 131 (286)
T ss_dssp HHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSCEE
T ss_pred HHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeeh
Confidence 5677788888999999999998631 001111 11111 11478999999988765
No 66
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=70.83 E-value=5.9 Score=37.28 Aligned_cols=53 Identities=17% Similarity=0.233 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCCccEEEEee-cc-----CChh-H--------HH----H-HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLG-EL-----GGRD-E--------YS----L-VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~g-E~-----~~~~-E--------~~----~-a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+++||+.++||+.| ++ |..- | .. . .+++. -...+||||+.+-|...
T Consensus 40 L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 113 (265)
T 2ppy_A 40 FNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTV 113 (265)
T ss_dssp HHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSSSEEEEEECSEEE
T ss_pred HHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccchhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEe
Confidence 567788888999999999999 64 1111 1 01 1 12221 11478999999988655
No 67
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=69.54 E-value=9.5 Score=35.60 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=35.7
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-H------------HHHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-E------------YSLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E------------~~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++... - | ....+++. -...+||||+.+.|..-
T Consensus 32 l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 103 (254)
T 3gow_A 32 LYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAA 103 (254)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred HHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhcchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 56778888899999999999986310 0 0 01122222 12589999999988765
No 68
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=69.48 E-value=5.6 Score=37.78 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=34.6
Q ss_pred HHHHHHHhhcCCCccEEEEee-----ccCC------hh-H---------HH-----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLG-----ELGG------RD-E---------YS-----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~g-----E~~~------~~-E---------~~-----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.| ++++ .- + .. ..+++. -...+||||+.+.|...
T Consensus 42 L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 121 (275)
T 4eml_A 42 LYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAI 121 (275)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC--------------CCCHHHHHHHHHHSSSEEEEEECSEEE
T ss_pred HHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccccchhhHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 567788888899999999999 7641 00 0 00 111221 11478999999988765
No 69
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=69.38 E-value=8.5 Score=36.13 Aligned_cols=53 Identities=19% Similarity=0.162 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-HH-------H----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-EY-------S----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E~-------~----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++... - |. . ..++.. -...+||||+.+-|..-
T Consensus 37 L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 107 (258)
T 4fzw_A 37 LVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYAL 107 (258)
T ss_dssp HHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHHHHTCSHHHHHHHHHTCCSCEEEEECSEEE
T ss_pred HHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhhHHHhHHHHHHHHHHHCCCCEEEEEcCcce
Confidence 56788888999999999999985321 1 10 0 011111 12578999999988655
No 70
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=69.04 E-value=7.9 Score=36.36 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=34.8
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCC-------------hhHH--H----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGG-------------RDEY--S----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~-------------~~E~--~----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||++++||+.|++.. ..+. + ..+++. -...+||||+.+.|...
T Consensus 47 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 120 (257)
T 1szo_A 47 ELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVT 120 (257)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCBC
T ss_pred HHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHHHHHHHHHHHHHHHHcCCCcEEEEECCchH
Confidence 35677778888999999999998531 1111 1 112222 11478999999988544
No 71
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=68.98 E-value=10 Score=35.39 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=35.5
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh---------------hHH---HHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR---------------DEY---SLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~---------------~E~---~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|+.... .+. ...+.+. -...+||||+.+-|-.-
T Consensus 32 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 103 (254)
T 3hrx_A 32 LYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAA 103 (254)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHHHHHHHHHHHHhCCCCEEEEECCEee
Confidence 66788888999999999999975421 011 1111111 12589999999988655
No 72
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=68.88 E-value=6.3 Score=37.22 Aligned_cols=53 Identities=17% Similarity=0.312 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh------HH---------------HHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD------EY---------------SLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~------E~---------------~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.... |. ...+++. -...+||||+.+.|...
T Consensus 37 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 111 (266)
T 3fdu_A 37 IAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAI 111 (266)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHHHHHHHHCCSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhhHHHHHHHHHHHHHHhCCCCEEEEECCEEe
Confidence 567778888899999999998742100 10 1112221 11478999999998765
No 73
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=68.80 E-value=6.3 Score=37.43 Aligned_cols=53 Identities=26% Similarity=0.332 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-H----------HHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-E----------YSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E----------~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++... - | ... .+++. -...+||||+.+.|...
T Consensus 49 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 125 (279)
T 3g64_A 49 LRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAALHGVAA 125 (279)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCeec
Confidence 56778888889999999999986310 0 0 001 11111 11478999999988765
No 74
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=68.69 E-value=10 Score=35.57 Aligned_cols=23 Identities=26% Similarity=0.296 Sum_probs=19.9
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+||+.++||+.|++
T Consensus 38 L~~al~~~~~d~~vr~vVltg~g 60 (263)
T 3l3s_A 38 LHDALRRAMGDDHVHVLVIHGPG 60 (263)
T ss_dssp HHHHHHHHHTCTTCCEEEEECCS
T ss_pred HHHHHHHHHhCCCceEEEEECCC
Confidence 56778888899999999999975
No 75
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=68.42 E-value=5.4 Score=37.98 Aligned_cols=53 Identities=23% Similarity=0.199 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-H--------HHHH-------HHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-E--------YSLV-------EALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E--------~~~a-------~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++... - | .... +++. -...+||||+.+.|...
T Consensus 60 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 134 (276)
T 3rrv_A 60 LARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAV 134 (276)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECceee
Confidence 56778888889999999999986321 0 0 0111 1111 11478999999988765
No 76
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=68.33 E-value=8.3 Score=35.92 Aligned_cols=53 Identities=26% Similarity=0.338 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-----------------ChhHH-H----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-----------------GRDEY-S----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-----------------~~~E~-~----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++. ...+. . ..+++. -...+||||+.+.|..-
T Consensus 31 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~ 106 (253)
T 1uiy_A 31 LLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAV 106 (253)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 567777888899999999999742 11100 0 112221 11478999999988655
No 77
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=68.03 E-value=6.9 Score=36.84 Aligned_cols=23 Identities=17% Similarity=0.206 Sum_probs=19.6
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+||++++||+.|++
T Consensus 43 L~~al~~~~~d~~vr~vVltg~g 65 (267)
T 3oc7_A 43 LHQGLRDASSDPAVRVVVLAHTG 65 (267)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECS
T ss_pred HHHHHHHHhcCCCceEEEEECCC
Confidence 56677788889999999999975
No 78
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=68.02 E-value=11 Score=35.64 Aligned_cols=54 Identities=13% Similarity=0.222 Sum_probs=34.5
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccC------------C--hhHH--HH----HHHHH-cCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELG------------G--RDEY--SL----VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~------------~--~~E~--~~----a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||++++||+.|++. . ..+. +. .+++. -...+||||+.+-|...
T Consensus 55 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 129 (263)
T 2j5g_A 55 EFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAAL 129 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEC
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcch
Confidence 3567777888899999999999741 0 1110 01 12222 12579999999988544
No 79
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=67.79 E-value=8.1 Score=36.93 Aligned_cols=53 Identities=19% Similarity=0.216 Sum_probs=33.8
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-----Ch--------hHHHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-----GR--------DEYSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-----~~--------~E~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++. .. ..... .+++. -...+||||+.+-|..-
T Consensus 65 L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 138 (287)
T 2vx2_A 65 LQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLAT 138 (287)
T ss_dssp HHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEE
Confidence 456677778899999999999741 10 01111 11121 12589999999988655
No 80
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=67.65 E-value=11 Score=35.00 Aligned_cols=53 Identities=30% Similarity=0.375 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEee-ccC-----Chh---------HH--H----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLG-ELG-----GRD---------EY--S----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~g-E~~-----~~~---------E~--~----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.| .+. ..- +. + ..+++. -...+||||+.+.|...
T Consensus 32 l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~ 106 (250)
T 2a7k_A 32 VKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAI 106 (250)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHHHHHHHHHHHHHcCCCCEEEEECCeEe
Confidence 567777888899999999999 642 110 10 0 112121 12578999999988655
No 81
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=67.19 E-value=7.4 Score=36.55 Aligned_cols=53 Identities=21% Similarity=0.310 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC--------------h-hHH-HH----HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG--------------R-DEY-SL----VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~--------------~-~E~-~~----a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.. . .+. .. .+++. -...+||||+.+.|...
T Consensus 37 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 110 (261)
T 3pea_A 37 VTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAAL 110 (261)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 5677788888999999999997521 1 110 11 11221 12589999999988655
No 82
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=66.86 E-value=8.3 Score=36.31 Aligned_cols=53 Identities=25% Similarity=0.256 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-H------HHH-----HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-E------YSL-----VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E------~~~-----a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++... - | .+. .+++. -...+||||+.+.|..-
T Consensus 42 l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 112 (263)
T 3moy_A 42 VLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYAL 112 (263)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCCSCEEEEECBEEE
T ss_pred HHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchhHHHHHHHHHHHHHHhCCCCEEEEECCEee
Confidence 56777888889999999999964210 0 1 000 11111 22579999999988655
No 83
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=66.71 E-value=9.2 Score=36.13 Aligned_cols=53 Identities=19% Similarity=0.146 Sum_probs=34.6
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh---------------hHHH-------HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR---------------DEYS-------LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~---------------~E~~-------~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++... ...+ ..+++. -...+||||+.+.|...
T Consensus 36 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 111 (268)
T 3i47_A 36 MRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAF 111 (268)
T ss_dssp HHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEE
Confidence 45677888889999999999985311 0000 111111 11478999999988655
No 84
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=65.97 E-value=9.1 Score=36.27 Aligned_cols=53 Identities=21% Similarity=0.347 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh------H-------------HHH----HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD------E-------------YSL----VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~------E-------------~~~----a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++...- | ... .+++. -...+||||+.+-|..-
T Consensus 47 L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~ 123 (274)
T 4fzw_C 47 LAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAA 123 (274)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHHHCSSCEEEEECSCEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHHHCCCCEEEEECCcee
Confidence 567788889999999999999753210 1 000 11111 11478999999988765
No 85
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=65.84 E-value=6.3 Score=37.40 Aligned_cols=54 Identities=20% Similarity=0.235 Sum_probs=34.6
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCChh-HHHHH---------H-----HHH-----cC---CCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGGRD-EYSLV---------E-----ALK-----QG---KVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~-E~~~a---------~-----~~~-----~~---~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||+.++||+.|++.... =.|.. . +.. -. ..+||||+.+.|...
T Consensus 51 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~ 127 (278)
T 4f47_A 51 IMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAI 127 (278)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCCC----------------------CTTCBTTTTBSCCCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEEe
Confidence 3566778888899999999999864321 00110 0 111 11 578999999988765
No 86
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=65.36 E-value=13 Score=35.14 Aligned_cols=54 Identities=22% Similarity=0.260 Sum_probs=35.7
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCChh------H--------HHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGGRD------E--------YSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~------E--------~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||+.++||+.|++.... | ... .+++. -...+||||+.+-|...
T Consensus 44 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 119 (272)
T 3qk8_A 44 DLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAV 119 (272)
T ss_dssp HHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEE
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 3567788888999999999999863210 1 000 11111 12589999999988655
No 87
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=65.25 E-value=11 Score=36.11 Aligned_cols=23 Identities=13% Similarity=0.287 Sum_probs=19.7
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+||+.++||+.|++
T Consensus 56 L~~al~~~~~d~~vr~vVltg~G 78 (290)
T 3sll_A 56 FKQMLVDISHDNDVRAVVITGAG 78 (290)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEST
T ss_pred HHHHHHHHHcCCCeeEEEEECCC
Confidence 55777888889999999999975
No 88
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=64.57 E-value=11 Score=36.14 Aligned_cols=53 Identities=8% Similarity=0.060 Sum_probs=35.2
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-----C-hh-HH------H----------HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-----G-RD-EY------S----------LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-----~-~~-E~------~----------~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|+.+ | .- |. . ..+++. -...+||||+.+.|...
T Consensus 39 L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~ 115 (289)
T 3h0u_A 39 LVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRAR 115 (289)
T ss_dssp HHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHHHHHHHHTCSSEEEEEECSEEE
T ss_pred HHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEee
Confidence 567788888899999999999863 3 11 10 0 011111 12578999999988655
No 89
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=64.35 E-value=9 Score=36.06 Aligned_cols=53 Identities=19% Similarity=0.280 Sum_probs=34.5
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC------------------hhHH--H----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG------------------RDEY--S----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~------------------~~E~--~----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++.. ..+. + ..+++. -...+||||+.+.|..-
T Consensus 35 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 112 (269)
T 1nzy_A 35 VTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAA 112 (269)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEE
T ss_pred HHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 5677778888999999999997421 1111 1 112221 12478999999988655
No 90
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=63.53 E-value=11 Score=35.32 Aligned_cols=53 Identities=25% Similarity=0.299 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-----Chh-H-------HH-----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-----GRD-E-------YS-----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-----~~~-E-------~~-----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++. ..- | .. ..+++. -...+||||+.+.|...
T Consensus 35 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 106 (257)
T 2ej5_A 35 VTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNGAAA 106 (257)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHHHHHCCSCEEEEECSEEE
T ss_pred HHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECcccc
Confidence 567777888899999999999742 110 0 11 112222 11478999999988655
No 91
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=62.85 E-value=7.3 Score=36.53 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=33.6
Q ss_pred HHHHHHHhhcCCCccEEEEee-ccC------Chh-H------------HHHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLG-ELG------GRD-E------------YSLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~g-E~~------~~~-E------------~~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+|| +++||+.| +++ ..- | ....+++. -...+||||+.+.|...
T Consensus 36 L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 108 (261)
T 1ef8_A 36 LMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVW 108 (261)
T ss_dssp HHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEECSEEE
T ss_pred HHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchhHHHHHHHHHHHHHHHhCCCCEEEEECCEEE
Confidence 567777788899 99999999 762 111 0 01122222 11478999999988655
No 92
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=62.54 E-value=12 Score=37.66 Aligned_cols=24 Identities=13% Similarity=0.193 Sum_probs=20.2
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG 55 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~ 55 (430)
+.++++.+.+||+.++||+.|+++
T Consensus 74 L~~al~~~~~d~~vr~vVltG~G~ 97 (407)
T 3ju1_A 74 MTVQLNLWKKDPLIACVVLDGSGE 97 (407)
T ss_dssp HHHHHHHHHHCTTEEEEEEEESSS
T ss_pred HHHHHHHHHhCCCcEEEEEecCCC
Confidence 456777788899999999999874
No 93
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=62.50 E-value=9.5 Score=35.95 Aligned_cols=53 Identities=23% Similarity=0.263 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC------hh-HHHH---------HHH----HHcCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG------RD-EYSL---------VEA----LKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~------~~-E~~~---------a~~----~~~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++++ .- |... ..+ +.....+||||+.+.|...
T Consensus 41 L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~ 113 (267)
T 3r9t_A 41 VGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRHFIDKPTIAAVNGTAL 113 (267)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTCGGGCGGGTTTCCCSSCEEEEECSEEC
T ss_pred HHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHHHhHHHHHHHHHhCCCCEEEEECCEEE
Confidence 4577888889999999999998751 00 1000 011 1112578999999988655
No 94
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=62.20 E-value=3.9 Score=43.39 Aligned_cols=55 Identities=25% Similarity=0.255 Sum_probs=38.2
Q ss_pred CCHHHHHHHhhcCCCccEEEEeeccCChh--H-HHHHHHHHc-CCCCCCEEEEecCCcc
Q 014132 30 STLSDHILRFNNIPQVKMMVVLGELGGRD--E-YSLVEALKQ-GKVNKPVVAWVSGTCA 84 (430)
Q Consensus 30 ~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~--E-~~~a~~~~~-~~~~KPvv~~~~G~~~ 84 (430)
..+.+.|+.+.+||+.++|++.+..+|-. + +...+.+++ .+.+||||+++.|..+
T Consensus 325 ~~l~~~L~~a~~d~~vkaVVL~i~spGG~~~~~~~i~~~i~~l~~~~kPVia~v~g~Aa 383 (593)
T 3bf0_A 325 DTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAA 383 (593)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCEEEEECCChH
Confidence 34788888899999999999999865522 2 112333321 1367999999988765
No 95
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=61.91 E-value=7 Score=36.73 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=34.5
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh------HH----HHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD------EY----SLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~------E~----~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++.... |. ...++.. -...+||||+.+.|...
T Consensus 41 L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 104 (256)
T 3pe8_A 41 FFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTTELPDISPKWPDMTKPVIGAINGAAV 104 (256)
T ss_dssp HHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC---------CCCCCCCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 567788888899999999999864211 10 1111111 12478999999988765
No 96
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=61.88 E-value=4.7 Score=37.90 Aligned_cols=53 Identities=17% Similarity=0.225 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh-HHHHHHHH-------------HcCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD-EYSLVEAL-------------KQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~-E~~~a~~~-------------~~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|+..... =.|..++. .....+||||+.+.|...
T Consensus 39 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~ 105 (256)
T 3trr_A 39 LAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSERGLGFTNVPPRKPIIAAVEGFAL 105 (256)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEETTEETTSSSCCSSCEEEEECSBCC
T ss_pred HHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhhhhhhHHHhcCCCCEEEEECCeee
Confidence 567778888899999999999863211 01112211 111468999999988765
No 97
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=61.67 E-value=8 Score=36.39 Aligned_cols=53 Identities=17% Similarity=0.184 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh---------HH---HH----HH-HHHc--C--CCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD---------EY---SL----VE-ALKQ--G--KVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~---------E~---~~----a~-~~~~--~--~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.... +. .. .+ ++.. . ..+||||+.+.|...
T Consensus 41 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~ 114 (265)
T 3rsi_A 41 FAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACL 114 (265)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTCSEECC--------------CCCHHHHHHHTTSSCCCSSCEEEEECSCEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCCcccCcCCCcccccchHHHHHHhHHHHHHHHHHhcCCCCCEEEEECCeee
Confidence 456777788899999999999863110 00 00 12 3332 3 579999999998766
No 98
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=60.19 E-value=13 Score=34.76 Aligned_cols=53 Identities=23% Similarity=0.247 Sum_probs=34.5
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC-------------h-h-HH--H----HHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG-------------R-D-EY--S----LVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~-------------~-~-E~--~----~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.. . . +. + ..+++. -...+||||+.+.|..-
T Consensus 42 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 116 (264)
T 1wz8_A 42 LARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAV 116 (264)
T ss_dssp HHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEE
T ss_pred HHHHHHHHhcCCCeeEEEEECCCCCCcccCccccccccccchHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeee
Confidence 5677788889999999999998421 0 1 10 0 111121 12478999999988655
No 99
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=60.01 E-value=13 Score=35.31 Aligned_cols=53 Identities=17% Similarity=0.259 Sum_probs=33.7
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC-----hh-H------HH--HHH----HHHcCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG-----RD-E------YS--LVE----ALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~-----~~-E------~~--~a~----~~~~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|.+.. .- | .+ ..+ +.+-...+||||+.+.|...
T Consensus 57 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 127 (278)
T 3h81_A 57 VTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYAL 127 (278)
T ss_dssp HHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTTTGGGHHHHTCCSCEEEEECBEEE
T ss_pred HHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhhHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 5567778888999999999996421 10 1 00 011 10111578999999988655
No 100
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=59.86 E-value=17 Score=35.93 Aligned_cols=53 Identities=17% Similarity=0.288 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC------hh-HH------------HH----HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG------RD-EY------------SL----VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~------~~-E~------------~~----a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++++ .- +. +. .+++. -...+||||+.+-|..-
T Consensus 38 L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 114 (363)
T 3bpt_A 38 IYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITM 114 (363)
T ss_dssp HHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEe
Confidence 5567777888999999999998631 11 10 00 01111 12579999999999654
No 101
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=59.52 E-value=9 Score=36.84 Aligned_cols=23 Identities=22% Similarity=0.309 Sum_probs=20.0
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+||++++||+.|++
T Consensus 62 L~~al~~~~~d~~vr~vVltg~G 84 (298)
T 3qre_A 62 FYAAIDRAEADPGIRVIVLTGRG 84 (298)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEST
T ss_pred HHHHHHHHHhCCCceEEEEECCC
Confidence 66778888889999999999985
No 102
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=58.66 E-value=7.9 Score=36.30 Aligned_cols=53 Identities=26% Similarity=0.340 Sum_probs=33.8
Q ss_pred HHHHHHHhhcCCCccEEEEeecc-----CChh-H--------HHHHHH---H-HcCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL-----GGRD-E--------YSLVEA---L-KQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~-----~~~~-E--------~~~a~~---~-~~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||++++||+.|++ |..- | .....+ + +-...+||||+.+-|..-
T Consensus 39 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 109 (260)
T 1mj3_A 39 LNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYAL 109 (260)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHHHHHHHHHHHHHHHhCCCCEEEEECCEEE
Confidence 46677778889999999999984 2211 1 001111 1 112478999999988655
No 103
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=58.40 E-value=8.5 Score=36.33 Aligned_cols=23 Identities=17% Similarity=0.251 Sum_probs=19.5
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+||+.++||+.|++
T Consensus 36 L~~al~~~~~d~~vr~vVltg~g 58 (275)
T 1dci_A 36 LVECFQKISKDSDCRAVVVSGAG 58 (275)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEST
T ss_pred HHHHHHHHHhCCCceEEEEECCC
Confidence 46677788889999999999974
No 104
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=57.25 E-value=6 Score=37.35 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=33.7
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCChh-HHHHHHH--------------HHcCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGGRD-EYSLVEA--------------LKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~-E~~~a~~--------------~~~~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+||++++||+.|+..... =.|..++ +.....+||||+.+.|...
T Consensus 46 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~ 114 (265)
T 3qxi_A 46 ALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEGRGLGFTERPPAKPLIAAVEGYAL 114 (265)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETTTEETTTTSCCSSCEEEEECSEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhhhhhhHHHhhCCCCEEEEECCcee
Confidence 3567777888899999999999864211 0011111 1111127999999988655
No 105
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=56.95 E-value=33 Score=26.82 Aligned_cols=60 Identities=17% Similarity=0.336 Sum_probs=40.1
Q ss_pred HHHHHHHHc-CCCCCCEEEEecCCcccccccccccccccccccCCcCcHHHHHHHHHHCCC----cccCChHHHHHHHHH
Q 014132 60 YSLVEALKQ-GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKE 134 (430)
Q Consensus 60 ~~~a~~~~~-~~~~KPvv~~~~G~~~~~~p~g~~~gHagai~~~~~g~~~~k~~~l~~~Gv----~~~~~~~~l~~~~~~ 134 (430)
.+.++.++. ...+||+|.|+.|.+. .+.-....-.++.|+ ....+|+||-.-+++
T Consensus 38 qdirdiiksmkdngkplvvfvngasq--------------------ndvnefqneakkegvsydvlkstdpeeltqrvre 97 (112)
T 2lnd_A 38 QDIRDIIKSMKDNGKPLVVFVNGASQ--------------------NDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVRE 97 (112)
T ss_dssp HHHHHHHHHHTTCCSCEEEEECSCCH--------------------HHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHhcCCeEEEEecCccc--------------------ccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHH
Confidence 345666652 2478999999998776 122223334445564 467899999999998
Q ss_pred HHHHH
Q 014132 135 TFEKL 139 (430)
Q Consensus 135 ~~~~~ 139 (430)
.++..
T Consensus 98 flkta 102 (112)
T 2lnd_A 98 FLKTA 102 (112)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 88763
No 106
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=56.59 E-value=7.7 Score=35.64 Aligned_cols=52 Identities=15% Similarity=0.239 Sum_probs=36.7
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCChh--H-HHHHHHHHcCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGGRD--E-YSLVEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~--E-~~~a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
.+.+.|.++.+|+..+.|+++.-.||-. . ....+.++ ..+|||++++.|..+
T Consensus 61 ~i~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i~--~~~~pV~t~v~G~Aa 115 (218)
T 1y7o_A 61 SVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN--FIKADVQTIVMGMAA 115 (218)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHH--HSSSCEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHH--hcCCCEEEEEccEeH
Confidence 4566777778888899999987766533 1 22345555 367999999988666
No 107
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=55.90 E-value=14 Score=35.06 Aligned_cols=25 Identities=16% Similarity=0.081 Sum_probs=20.6
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccC
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELG 55 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~ 55 (430)
.+.++++.+.+||+.++||+.|++.
T Consensus 51 ~L~~al~~~~~d~~vr~vVltg~G~ 75 (279)
T 3t3w_A 51 ELDAAWTRAAEDNDVSVIVLRANGK 75 (279)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECSS
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCC
Confidence 3567778888899999999999863
No 108
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=55.46 E-value=15 Score=33.99 Aligned_cols=51 Identities=14% Similarity=0.115 Sum_probs=34.0
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-----Chh-HHHH-----------HHHHHcCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-----GRD-EYSL-----------VEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-----~~~-E~~~-----------a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++. +.- +... .+.+. ..+||||+.+-|...
T Consensus 35 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~--~~~kPvIAav~G~a~ 102 (243)
T 2q35_A 35 LRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDLSGLIL--DCEIPIIAAMQGHSF 102 (243)
T ss_dssp HHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCCCCCCCHHHHH--TCCSCEEEEECSEEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchhhHHHHHHHHHH--hCCCCEEEEEcCccc
Confidence 456777788899999999999742 111 1110 11122 578999999988655
No 109
>3bv8_A Tetrahydrodipicolinate acetyltransferase; PFAM08503, structural genomics, PSI-2, PR structure initiative; 1.75A {Staphylococcus aureus subsp}
Probab=55.16 E-value=13 Score=29.46 Aligned_cols=53 Identities=8% Similarity=0.128 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCccc-ccccccc---cccccccccCCcCcHHHHHHHHHH
Q 014132 60 YSLVEALKQGKVNKPVVAWVSGTCAR-LFKSEVQ---FGHAGAKSGGEMESAQAKNQALRD 116 (430)
Q Consensus 60 ~~~a~~~~~~~~~KPvv~~~~G~~~~-~~p~g~~---~gHagai~~~~~g~~~~k~~~l~~ 116 (430)
++..+||+.++.+.||-+|+-|.-.. .+|...+ -+|.|.++ |+.......+.+
T Consensus 7 ~eII~yI~~skKkTPVKvYvkG~l~~~~~~~~~~~fg~~~~~vlf----Gdw~~i~~~le~ 63 (87)
T 3bv8_A 7 EEIIQYISDAKKFTPIKVYLNGNFEGITYPESFKVFGSEQSKVIF----CEADDWKPFYEA 63 (87)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECCTTCCCCTTCEEEEETTEEEEE----EEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEEecccccCcCCcceEEEecCCcEEEE----ecHHHHHHHHHh
Confidence 35789999767778999999997653 2443434 46778888 788766666654
No 110
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=53.93 E-value=12 Score=35.31 Aligned_cols=23 Identities=26% Similarity=0.190 Sum_probs=20.0
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+||+.++||+.|++
T Consensus 43 L~~al~~~~~d~~vr~vVltg~g 65 (274)
T 3tlf_A 43 LRAAYHEAENDDRVWLLVVTGTG 65 (274)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEST
T ss_pred HHHHHHHHhcCCCeEEEEEeCCC
Confidence 56778888899999999999985
No 111
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=53.76 E-value=12 Score=35.36 Aligned_cols=52 Identities=21% Similarity=0.267 Sum_probs=29.8
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC------------hh--HHHHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG------------RD--EYSLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~------------~~--E~~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+| +.++||+.|++.. .. .....+++. -...+||||+.+.|...
T Consensus 53 L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 119 (264)
T 3he2_A 53 LTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMDASPMPVVGAINGPAI 119 (264)
T ss_dssp HHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTTGGGHHHHHHHHHHHHHHCSSCEEEEECSCEE
T ss_pred HHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchhhHHHHHHHHHHHHHHHhCCCCEEEEECCcEE
Confidence 44556666667 9999999998531 00 111122222 11478999999988765
No 112
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=52.69 E-value=15 Score=34.10 Aligned_cols=64 Identities=14% Similarity=0.227 Sum_probs=39.3
Q ss_pred EEEEecCCccCC--CCHHHHHHHhhcCCCccEEEEeeccCChhHHH---HHHHHHcCCCCCCEEEEe---cCCcc
Q 014132 18 EGIAIGGDVFPG--STLSDHILRFNNIPQVKMMVVLGELGGRDEYS---LVEALKQGKVNKPVVAWV---SGTCA 84 (430)
Q Consensus 18 ~~i~~Ggd~i~g--~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E~~---~a~~~~~~~~~KPvv~~~---~G~~~ 84 (430)
..|-+.|.--.+ ..+.+.|+..++ ++.++|++++..||-.-.. ..+.++ ..+|||++++ .|..+
T Consensus 11 ~vI~i~g~I~~~~~~~l~~~l~~a~~-~~~~~Ivl~inspGG~v~~~~~i~~~i~--~~~~PVia~v~p~~G~Aa 82 (230)
T 3viv_A 11 YVAQIKGQITSYTYDQFDRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQRIQ--QSKIPVIIYVYPPGASAA 82 (230)
T ss_dssp EEEEEESCBCHHHHHHHHHHHHHHHH-TTCSEEEEEEEBSCEEHHHHHHHHHHHH--TCSSCEEEEECSTTCEEE
T ss_pred EEEEEeCEECHHHHHHHHHHHHHHhc-CCCCEEEEEEeCCCcCHHHHHHHHHHHH--hCCCCEEEEEecCCCEEh
Confidence 345666633111 134566666655 4699999998777644222 234444 4789999999 67655
No 113
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=51.99 E-value=7.8 Score=37.87 Aligned_cols=23 Identities=30% Similarity=0.355 Sum_probs=19.9
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++|+.+.+||+.++||+.|++
T Consensus 67 L~~al~~~~~d~~vrvvVltG~G 89 (333)
T 3njd_A 67 LSALVERADLDPDVHVILVSGRG 89 (333)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEST
T ss_pred HHHHHHHHhhCCCcEEEEEECCC
Confidence 56778888889999999999985
No 114
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=49.95 E-value=23 Score=33.38 Aligned_cols=53 Identities=25% Similarity=0.347 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC-----hh-HH-------------HHH----HH-HH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG-----RD-EY-------------SLV----EA-LK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~-----~~-E~-------------~~a----~~-~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.. .- |. ... ++ +. -...+||||+.+-|..-
T Consensus 41 L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 118 (276)
T 2j5i_A 41 MIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCF 118 (276)
T ss_dssp HHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHHHHHHHTTTTTTCSSCEEEEECSCEE
T ss_pred HHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 5677788889999999999998421 11 10 001 11 11 12578999999988655
No 115
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=49.53 E-value=12 Score=33.97 Aligned_cols=64 Identities=16% Similarity=0.178 Sum_probs=41.4
Q ss_pred EEEecCCccC--CCCHHHHHHHhhcCCCccEEEEeeccCChhH---HHHHHHHHcCCCCCCEEEEecCCcc
Q 014132 19 GIAIGGDVFP--GSTLSDHILRFNNIPQVKMMVVLGELGGRDE---YSLVEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 19 ~i~~Ggd~i~--g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E---~~~a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
.|-++|.--. .-.+.+.|.++.+|+..+.|+++.-.||-.- ....+.++ ..+|||++++.|..+
T Consensus 29 ii~l~G~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~~~I~~~i~--~~~~pV~~~v~g~Aa 97 (208)
T 2cby_A 29 IIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMV--LAPCDIATYAMGMAA 97 (208)
T ss_dssp EEEECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHH--HCSSCEEEEEEEEEE
T ss_pred EEEEcCEECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHHHHHHHHHH--hcCCCEEEEECcEeH
Confidence 4566664311 2245667777788888899988866555432 22355555 357999999988766
No 116
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=48.10 E-value=7.1 Score=36.80 Aligned_cols=53 Identities=21% Similarity=0.254 Sum_probs=34.2
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCChh------HH------HH------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGRD------EY------SL------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~~------E~------~~------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.|++.... |. .. .+++. -...+||||+.+.|...
T Consensus 39 L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 110 (265)
T 3qxz_A 39 LGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFSASPVQPAAFELRTPVIAAVNGHAI 110 (265)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSCCCSCCSSSCGGGSSSCEEEEECSEEE
T ss_pred HHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECCEEe
Confidence 567788888999999999999853100 00 00 01111 11468999999988766
No 117
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=47.47 E-value=25 Score=33.12 Aligned_cols=23 Identities=9% Similarity=0.053 Sum_probs=19.5
Q ss_pred HHHHHHHhhcCCCccEEEEeecc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+||++++||+.|++
T Consensus 41 L~~al~~~~~d~~vr~vVltg~g 63 (280)
T 1pjh_A 41 LGELLELADRNRDVYFTIIQSSG 63 (280)
T ss_dssp HHHHHHHHHHCTTCCEEEEECBT
T ss_pred HHHHHHHHhcCCCceEEEEECCC
Confidence 56777788889999999999974
No 118
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=44.21 E-value=29 Score=31.77 Aligned_cols=52 Identities=21% Similarity=0.162 Sum_probs=31.8
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC-----h-------hHHHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG-----R-------DEYSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~-----~-------~E~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+| +.++||+.|++.. . ...+. .+++. -...+||||+.+.|...
T Consensus 36 L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 107 (233)
T 3r6h_A 36 LNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAI 107 (233)
T ss_dssp HHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred HHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcch
Confidence 55667777777 5899999998521 0 00111 11111 12589999999988655
No 119
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=43.74 E-value=17 Score=32.52 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=40.5
Q ss_pred EEEecCCccC--CCCHHHHHHHhhcCCCccEEEEeeccCChhH---HHHHHHHHcCCCCCCEEEEecCCcc
Q 014132 19 GIAIGGDVFP--GSTLSDHILRFNNIPQVKMMVVLGELGGRDE---YSLVEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 19 ~i~~Ggd~i~--g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E---~~~a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
.|-++|.-.. .-.+...|.++.+|+..+.|+++.-.||-.- ....+.++ ..++||++++.|..+
T Consensus 28 ii~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~a~~~I~~~i~--~~~~pV~~~v~g~Aa 96 (193)
T 1yg6_A 28 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ--FIKPDVSTICMGQAA 96 (193)
T ss_dssp EEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHH--HSSSCEEEEEEEEEE
T ss_pred EEEEcCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHH--hcCCCEEEEEeeeHH
Confidence 3445554311 2346667777777777899988866655432 22355565 356899999988766
No 120
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=43.47 E-value=47 Score=31.28 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=33.6
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCC--------------hhH--H-------HHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGG--------------RDE--Y-------SLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~--------------~~E--~-------~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+. +||+.|++.. ..+ . ...+++. -...+||||+.+-|..-
T Consensus 58 L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 133 (280)
T 2f6q_A 58 IMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAV 133 (280)
T ss_dssp HHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHSCCSCEEEEECSCEE
T ss_pred HHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeee
Confidence 56777778889999 9999997421 001 0 0112222 12589999999998765
No 121
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=43.13 E-value=32 Score=37.49 Aligned_cols=53 Identities=21% Similarity=0.303 Sum_probs=35.8
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCCh------------h-HHHHHHHHH-cCCCCCCEEEEecCCc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGGR------------D-EYSLVEALK-QGKVNKPVVAWVSGTC 83 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~~------------~-E~~~a~~~~-~~~~~KPvv~~~~G~~ 83 (430)
.+.++++.+.+||+.++||+.|+.... . +....++++ -...+||||+.+-|..
T Consensus 51 ~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~~~~~~~~~~i~~~~kPvIAai~G~a 117 (742)
T 3zwc_A 51 EVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDEIQRYQKPVLAAIQGVA 117 (742)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSCSHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred HHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChhHHHHHHHHHHHhCCCCEEEEECccc
Confidence 356788888999999999999975321 1 112233332 1147899999998854
No 122
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=37.54 E-value=36 Score=36.71 Aligned_cols=52 Identities=21% Similarity=0.182 Sum_probs=34.1
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-C----------------hh-HH-----HHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-G----------------RD-EY-----SLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-~----------------~~-E~-----~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+||+.++||+.| .. . +. +. ...+++. -...+||||+.+-|..-
T Consensus 40 L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 115 (715)
T 1wdk_A 40 LRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAINGIAL 115 (715)
T ss_dssp HHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSCEE
T ss_pred HHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEee
Confidence 567788888999999999999 43 0 11 10 0112222 12578999999999653
No 123
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=35.05 E-value=33 Score=32.40 Aligned_cols=43 Identities=19% Similarity=0.192 Sum_probs=26.9
Q ss_pred CCCccEEEEeeccCC--------------hhHH-----HHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 42 IPQVKMMVVLGELGG--------------RDEY-----SLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 42 Dp~T~~Ivl~gE~~~--------------~~E~-----~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
||+.++||+.|++.. ..+. ...+++. -...+||||+.+.|...
T Consensus 56 d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 118 (275)
T 3hin_A 56 PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAVI 118 (275)
T ss_dssp CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEE
T ss_pred CcCceEEEEECCCCCccCCCCHHHHhccChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 789999999998531 1110 0111111 12589999999988655
No 124
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=34.04 E-value=52 Score=31.47 Aligned_cols=23 Identities=4% Similarity=-0.008 Sum_probs=17.4
Q ss_pred HHHHHHHhhc-----CCCccEEEEeecc
Q 014132 32 LSDHILRFNN-----IPQVKMMVVLGEL 54 (430)
Q Consensus 32 ~~d~l~~l~~-----Dp~T~~Ivl~gE~ 54 (430)
+.++++.+.+ ||+.++||+.|++
T Consensus 68 L~~al~~~~~d~~~~d~~vr~vVltg~G 95 (305)
T 3m6n_A 68 ITGYQTNLGQRLNTAGVLAPHVVLASDS 95 (305)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEEEESS
T ss_pred HHHHHHHHHhcccccCCCeEEEEEECCC
Confidence 4555666666 6999999999974
No 125
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=33.27 E-value=54 Score=33.42 Aligned_cols=22 Identities=14% Similarity=0.078 Sum_probs=18.7
Q ss_pred HHHHHHHhhcCCCccEEEEeec
Q 014132 32 LSDHILRFNNIPQVKMMVVLGE 53 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE 53 (430)
+.++++.+.+||+.++||+.|.
T Consensus 199 L~~al~~~~~D~~VRvVVLtG~ 220 (440)
T 2np9_A 199 METAVDLALLDPGVRVGLLRGG 220 (440)
T ss_dssp HHHHHHHHHHCTTCSEEEEEEC
T ss_pred HHHHHHHHHhCCCceEEEEEcC
Confidence 4567777888999999999995
No 126
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=33.13 E-value=48 Score=30.29 Aligned_cols=51 Identities=10% Similarity=0.083 Sum_probs=30.4
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-H-----HHHH-------HHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-E-----YSLV-------EALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E-----~~~a-------~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+|+ ++||+.|++... - | .+.. +++. -...+||||+.+.|...
T Consensus 37 L~~al~~~~~d~--~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 106 (232)
T 3ot6_A 37 FNAALDQAEKDR--AIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSHPFPIIVACPGHAV 106 (232)
T ss_dssp HHHHHHHHHHTT--CEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSCEEEECCEEEE
T ss_pred HHHHHHHHhcCC--CEEEEECCCCCccCCcCHHHHhhChHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEee
Confidence 456666677775 899999875310 0 1 1111 1111 12589999999988654
No 127
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=31.48 E-value=45 Score=35.02 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.5
Q ss_pred CHHHHHHHhhcC-CCccEEEEee-c
Q 014132 31 TLSDHILRFNNI-PQVKMMVVLG-E 53 (430)
Q Consensus 31 ~~~d~l~~l~~D-p~T~~Ivl~g-E 53 (430)
.+.++++.+.+| |+.++||+.| +
T Consensus 62 eL~~AL~~~~~D~~~VRaVVLTGa~ 86 (556)
T 2w3p_A 62 ELHDAIQRIRFEHPEVRTVVLTSLK 86 (556)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESS
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCC
Confidence 456778888889 9999999999 5
No 128
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=31.16 E-value=66 Score=30.09 Aligned_cols=52 Identities=13% Similarity=0.004 Sum_probs=30.1
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh-----h-H---------------HHHHHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR-----D-E---------------YSLVEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~-----~-E---------------~~~a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+| +.++||+.|++... - | ....+++. -...+||||+.+-|...
T Consensus 39 L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 112 (267)
T 3hp0_A 39 CLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKLQTGPYVTISHVRGKVN 112 (267)
T ss_dssp HHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHHHHSSSEEEEEECSEEE
T ss_pred HHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEe
Confidence 44556666666 58888888875210 0 1 01112221 11478999999988655
No 129
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=30.85 E-value=85 Score=28.97 Aligned_cols=52 Identities=21% Similarity=0.124 Sum_probs=31.5
Q ss_pred HHHHHHHhhcCCCccEEEEeeccCCh------------hHHHH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELGGR------------DEYSL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~~~------------~E~~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+ ++.++||+.|++... .+.+. .+++. -...+||||+.+-|...
T Consensus 39 L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 110 (254)
T 3isa_A 39 LIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNF 110 (254)
T ss_dssp HHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEE
T ss_pred HHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeEe
Confidence 4556666655 589999999985310 01111 11111 12578999999988655
No 130
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=30.53 E-value=74 Score=30.19 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=31.9
Q ss_pred HHHHHHHhhcCCCccEEEEeeccC-----Chh-HH----------HH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 32 LSDHILRFNNIPQVKMMVVLGELG-----GRD-EY----------SL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~gE~~-----~~~-E~----------~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
+.++++.+.+|+. ++||+.|++. ..- |. .. .+++. -...+||||+.+-|..-
T Consensus 56 L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~ 131 (291)
T 2fbm_A 56 IVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAI 131 (291)
T ss_dssp HHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEE
T ss_pred HHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeee
Confidence 4566677777885 9999999742 111 10 01 11111 11478999999988765
No 131
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=29.08 E-value=40 Score=30.54 Aligned_cols=64 Identities=13% Similarity=0.222 Sum_probs=41.0
Q ss_pred EEEecCCccC--CCCHHHHHHHhhcCCCccEEEEeeccCChhH---HHHHHHHHcCCCCCCEEEEecCCcc
Q 014132 19 GIAIGGDVFP--GSTLSDHILRFNNIPQVKMMVVLGELGGRDE---YSLVEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 19 ~i~~Ggd~i~--g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E---~~~a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
.|-+||.--. .-.+...|.++.+|+..+.|+++.-.||-.- ....+.++ ..++||++++.|..+
T Consensus 29 iI~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~~~I~~~i~--~~~~~V~t~~~G~Aa 97 (203)
T 3qwd_A 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQ--HIKPDVQTICIGMAA 97 (203)
T ss_dssp EEEECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHH--HSSSCEEEEEEEEEE
T ss_pred EEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHH--HhcCCcEEEEeeeeh
Confidence 5566664311 2356667777887777888877766555432 22345555 357999999988766
No 132
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=27.56 E-value=89 Score=28.88 Aligned_cols=53 Identities=9% Similarity=0.063 Sum_probs=32.3
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCC-----hh-HH----------HH-------HHHHH-cCCCCCCEEEEecCCcc
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGG-----RD-EY----------SL-------VEALK-QGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~-----~~-E~----------~~-------a~~~~-~~~~~KPvv~~~~G~~~ 84 (430)
.+.++++.+.+|+. ++||+.|++.. .- |. .. .+++. -...+||||+.+-|..-
T Consensus 37 ~L~~al~~~~~d~~-r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 113 (261)
T 2gtr_A 37 EVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAI 113 (261)
T ss_dssp HHHHHHHHHHHSSC-SCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEE
T ss_pred HHHHHHHHHhcCCC-EEEEEecCCCccccccCchhhhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEe
Confidence 35566777778885 99999997421 00 10 01 11121 11478999999988765
No 133
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=25.70 E-value=41 Score=35.46 Aligned_cols=51 Identities=18% Similarity=0.068 Sum_probs=32.3
Q ss_pred CHHHHHHHhhcCCCccEEEEeeccCC--hh-H-HHHHHHHHcC-CCCCCEEEEecC
Q 014132 31 TLSDHILRFNNIPQVKMMVVLGELGG--RD-E-YSLVEALKQG-KVNKPVVAWVSG 81 (430)
Q Consensus 31 ~~~d~l~~l~~Dp~T~~Ivl~gE~~~--~~-E-~~~a~~~~~~-~~~KPvv~~~~G 81 (430)
++.+.|+...+||..++|+++.-.+| .- . .+..+.++.. +.+||||++..+
T Consensus 74 ~i~~~L~~a~~d~~ik~I~L~inspGgG~v~~~~~I~~~i~~~k~~gkpvva~~~~ 129 (593)
T 3bf0_A 74 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGEN 129 (593)
T ss_dssp HHHHHHHHHHHCTTCCCEEEECTEEEECCHHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHHHhCCCceEEEEEeCCCCCCcHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 35667777788999999999986554 22 1 2223333311 246999999643
No 134
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=24.58 E-value=54 Score=29.60 Aligned_cols=64 Identities=13% Similarity=0.110 Sum_probs=40.1
Q ss_pred EEEecCCccC--CCCHHHHHHHhhcCCCccEEEEeeccCChhH---HHHHHHHHcCCCCCCEEEEecCCcc
Q 014132 19 GIAIGGDVFP--GSTLSDHILRFNNIPQVKMMVVLGELGGRDE---YSLVEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 19 ~i~~Ggd~i~--g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E---~~~a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
.|-++|.--. .-.+...|.++.+|+..+.|+++.-.||-.- ....+.++ ..++||++++.|..+
T Consensus 32 iI~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~--~~~~~v~t~~~G~Aa 100 (201)
T 3p2l_A 32 IVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQ--FIKPDVSTICIGLAA 100 (201)
T ss_dssp EEEEESCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHH--HSSSCEEEEEEEEEE
T ss_pred EEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHHHH--HhCCCeEEEEcCEeh
Confidence 4555663311 2345667777777777888877766555332 22355555 356899999988766
No 135
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=24.17 E-value=52 Score=35.60 Aligned_cols=21 Identities=24% Similarity=0.257 Sum_probs=18.9
Q ss_pred HHHHHHHhhcCCCccEEEEee
Q 014132 32 LSDHILRFNNIPQVKMMVVLG 52 (430)
Q Consensus 32 ~~d~l~~l~~Dp~T~~Ivl~g 52 (430)
+.++++.+++||+.++||+.|
T Consensus 39 L~~al~~~~~d~~vr~vVltg 59 (725)
T 2wtb_A 39 LKSNYEEALSRNDVKAIVITG 59 (725)
T ss_dssp HHHHHHHHTTCTTCCEEEEEE
T ss_pred HHHHHHHHHhCCCceEEEEEC
Confidence 677888888999999999999
No 136
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=23.13 E-value=60 Score=29.53 Aligned_cols=63 Identities=13% Similarity=0.198 Sum_probs=37.7
Q ss_pred EEEecCCccC--CCCHHHHHHHhhcCCCccEEEEeeccCChhH---HHHHHHHHcCCCCCCEEEEecCCcc
Q 014132 19 GIAIGGDVFP--GSTLSDHILRFNNIPQVKMMVVLGELGGRDE---YSLVEALKQGKVNKPVVAWVSGTCA 84 (430)
Q Consensus 19 ~i~~Ggd~i~--g~~~~d~l~~l~~Dp~T~~Ivl~gE~~~~~E---~~~a~~~~~~~~~KPvv~~~~G~~~ 84 (430)
.|-++|.-.. .-.+...|.++.+++. +.|+++.-.||-.- ....+.++ ..++||++++.|..+
T Consensus 41 iI~l~G~I~~~~a~~i~~~L~~l~~~~~-k~I~l~INSPGGsv~a~~~I~~~i~--~~~~pV~t~v~g~AA 108 (215)
T 2f6i_A 41 IIYLTDEINKKTADELISQLLYLDNINH-NDIKIYINSPGGSINEGLAILDIFN--YIKSDIQTISFGLVA 108 (215)
T ss_dssp EEEECSCBCHHHHHHHHHHHHHHHHHCC-SCEEEEEEECCBCHHHHHHHHHHHH--HSSSCEEEEEEEEEC
T ss_pred EEEEccEECHHHHHHHHHHHHHHHhCCC-CcEEEEEECCCCCHHHHHHHHHHHH--hcCCCEEEEEeeEhH
Confidence 4566664421 1245556666655555 88888766555331 22355555 356899999988655
Done!