Citrus Sinensis ID: 014136

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430
Protein Sequence
MEVFLEFVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTCEQRGSETEKTHGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEAEMERVVEEHFGEFGGGESESNAKFGTGLTKDEVSVARSEEIEFLESKCEARKIQKDDGGKCSTFDCKEMLMDKNNFFESEKMAKIEAESTKTVTRMTESEETEVSKSNCDNEVDEANKNQEDGGESSIFNCKQILVYRSNFFESENIAAVKSESAITEVGMARSEEIEVLESNCDNEIGERNRDEEDDVKVVSFDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQSISSVLSTIENV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEccccccEEEccEEEEEEccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcEEEEcccccccccHHHHHHHHccccHHHHHHHHHHHHHcccccccccccEEEEEccccccccHHHHccccccccccccccHHHHHHccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEEccccEEEEEcEEEEEEEccccccEEEEEEccccccccccEccHcHcccHccHHHHHHccccEccccccccHHHHHHcccHHHcccHHHHHHHHHHHccccEEEEEcccccccEcccHHHHHccccccHHHHHHHHHHccccccccccccEHHHHcccccHHHHHHHccccccccccccEcccEEEEEEccccccccEEEEEEccccccccccccccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MEVFLEFVLPIAFSLIFSFFLAKLfslssspstncdcdlvsglkpckHFIQKVVTceqrgsetektHGFVAKVVeggsetqekillddccgscddvkigdnEVLKEAEMERVVEEhfgefgggesesnakfgtgltkdEVSVARSEEIEFLESKCEARKiqkddggkcstfdckemlmdknnffesEKMAKIEAESTKTVTRMTeseetevsksncdnevdeanknqedggessifncKQILVYRsnffeseniaavksesaITEVGMARSEEIEVLESncdneigernrdeeddvkvvsfdedddwegiERTELERLFGAAVAFVGnkcnagrissigsdvKMQLYGLHkiatvgpcrepqpmaLKVSARANWNAWKqlgnmtpeIAMEQYVTILSRsipgciqdgigVSIYFESTQSISSVLSTIENV
Flexible Loop (DISEMBL)
MEVFLEFVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTceqrgsetekthGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEAEMERVVEEHfgefgggesesnakfgtglTKDEVSVARSEEIEFLeskcearkiqkddggkcsTFDCKEMLMDKNNFFESEKMAKIeaestktvtrmteseetevsksncdnevdeanknqedggessiFNCKQILVYRSNFFESENIAAVKSESAITEVGMARSEEIEVLesncdneigernrdeeddvkvvsfdedddwegIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTqsissvlstienv
Low Complexity Region (SEG)
MEVFLEFVlpiafslifsfflaklfslssspsTNCDCDLVSGLKPCKHFIQKVVTCEQRGSETEKTHGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEAEMERVVeehfgefgggesesNAKFGTGLTKDEVSVARSEEIEFLESKCEARKIQKDDGGKCSTFDCKEMLMDKNNFFESEKMAKIEAESTKTVTRMTESEETEVSKSNCDNEVDEANKNQEDGGESSIFNCKQILVYRSNFFESENIAAVKSESAITEVGMARSEEIEVLESNCDNEIGERNRDEEDDVKVVSFDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQSISSVLSTIENV
Disordered region (IsUnstruct)
**VFLEFVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTCEQRG***EKTHGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEA****VV********************************************************TFDCK************************************************************IFNCKQILVYRSNFFESENIAAVK***************************************VVSFDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQ************
Disordered Region (DISOPRED)
*EVFLEFVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTCE*************AKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEAEMERVVEEHFGEFGGGESESNAKFGTGLTKDEVSVA************************CSTFDCKEMLMD**********************RMTESE*******N*************************ILVY********************************************************************TELERLFGAAVAFVG**************VKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCI*******************LSTI***
Disordered Region (DISEMBL)
MEVFLEFVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTCEQRGSETEKTHGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEAEMERVVEEHFGEFGGGESESNAKFGTGLTKDEVSVARSEEIEFLESKCEARKIQKDDGGKCSTFDCKEMLMDKNNFFESEKMAKIEA*********************CDNEVDEANKNQEDGGESSIFNCKQILVYRSNFFESENIAAVKSESAITEVGMARSEEIEVLESNCDNEIGERNRDEEDDVKVVSFDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQSISSVLSTIENV
Disordered Region (DISPRO)
MEVFLEFVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTCEQRGSETEKTHGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEAEMERVVEEHFGEFGGGESESNAKFGTGLTKDEVSVARSEEIEFLESKCEARKIQKDDGGKCSTFDCKEMLMDKN*FFESEK*****************SEETE*SKSNCDNEVDEANK******ESSIFNCKQILVYRSNFFESENIAAVKSES********************************************DWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCI**************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEVFLEFVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTCEQRGSETEKTHGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEVLKEAEMERVVEEHFGEFGGGESESNAKFGTGLTKDEVSVARSEEIEFLESKCEARKIQKDDGGKCSTFDCKEMLMDKNNFFESEKMAKIEAESTKTVTRMTESEETEVSKSNCDNEVDEANKNQEDGGESSIFNCKQILVYRSNFFESENIAAVKSESAITEVGMARSEEIEVLESNCDNEIGERNRDEEDDVKVVSFDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQSISSVLSTIENV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	430	2.2.26 [Sep-21-2011]
Q9STX1	362	Acyl-CoA-binding domain-c	yes	no	0.369	0.439	0.466	6e-34
Q9STP8	354	Acyl-CoA-binding domain-c	no	no	0.230	0.279	0.514	5e-23
Q9SM23	338	Acyl-CoA-binding domain-c	no	no	0.230	0.292	0.464	8e-18
Q8RWD9	648	Acyl-CoA-binding domain-c	no	no	0.204	0.135	0.362	6e-09
Q9MA55	668	Acyl-CoA-binding domain-c	no	no	0.204	0.131	0.373	8e-09
Q9WUR2	391	Enoyl-CoA delta isomerase	yes	no	0.134	0.148	0.431	2e-08
O75521	394	Enoyl-CoA delta isomerase	yes	no	0.127	0.139	0.436	6e-08
Q5XIC0	391	Enoyl-CoA delta isomerase	yes	no	0.134	0.148	0.413	8e-08
Q54GC8	288	Acyl-CoA-binding domain-c	yes	no	0.202	0.302	0.292	1e-07
Q502L1	501	Acyl-CoA-binding domain-c	no	no	0.204	0.175	0.359	5e-07

>sp|Q9STX1|ACBP3_ARATH Acyl-CoA-binding domain-containing protein 3 OS=Arabidopsis thaliana GN=ACBP3 PE=1 SV=1

 Score =  145 bits (366), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 113/165 (68%), Gaps = 6/165 (3%)

Query: 257 VKSESAITEVGMARSEEIEVLESNCDNEIGERNRDEEDDVKV-VSFDEDDDWEGIERTEL 315
           V++E +  +V +A SEE+ V +S+  N + E + + E++ K  ++ +EDDDWEGIER+EL
Sbjct: 174 VENEESGGDVLVAESEEVRVEKSS--NMVEESDAEAENEEKTELTIEEDDDWEGIERSEL 231

Query: 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWN 375
           E+ F AAV  +     +G+   IG++ KM+L+GLHKIAT G CRE QPMA+ +SARA WN
Sbjct: 232 EKAFAAAVNLLEE---SGKAEEIGAEAKMELFGLHKIATEGSCREAQPMAVMISARAKWN 288

Query: 376 AWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQSI 420
           AW++LGNM+ E AMEQY+ ++S+ IPG  + G  V    E   S+
Sbjct: 289 AWQKLGNMSQEEAMEQYLALVSKEIPGLTKAGHTVGKMSEMETSV 333

Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with arachidonyl-CoA, barely with oleoyl-CoA, but not with palmitoyl-CoA.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9STP8|ACBP2_ARATH Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1

 Score =  109 bits (272), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 2/101 (1%)

Query: 309 GIERTELERLFGAAVAFVGNKCNAGRISS-IGSDVKMQLYGLHKIATVGPCREPQPMALK 367
           G+E TEL+  F AA  FV     A R+S  + SDV+ QLYGL+KIAT GPC  PQP ALK
Sbjct: 98  GVESTELDEAFSAATLFV-TTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALK 156

Query: 368 VSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGI 408
           ++ARA W AW++LG M PE AME+Y+ I+++  P  +  G+
Sbjct: 157 MTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGV 197

Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with palmitoyl-CoA, but not with oleoyl-CoA. Binds to lead ions (Pb). May function as an intracellular carrier of acyl-CoA esters. Required for proper phospholipid and, to a lower extent, galactolipid composition.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SM23|ACBP1_ARATH Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2

 Score = 92.0 bits (227), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 68/99 (68%)

Query: 309 GIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKV 368
           G+E TEL+  F AA AFV    +      + +++++QLYGL+KIAT GPC  PQP ALK+
Sbjct: 88  GVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKM 147

Query: 369 SARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDG 407
           +ARA W AW++LG M PE AME+Y+ ++++  P  ++ G
Sbjct: 148 TARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEGG 186

Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with arachidonyl-CoA, barely with oleoyl-CoA, but not with palmitoyl-CoA. Confers tolerance and binds to lead ions Pb(2+), probably by promoting lead translocation from roots to shoots. May function as an intracellular carrier of acyl-CoA esters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RWD9|ACBP5_ARATH Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=ACBP5 PE=1 SV=1

 Score = 62.4 bits (150), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 316 ERLFGAA--VAFVGNKCNAGRISS-IGSDVKMQLYGLHKIATVGPCREPQPMALKVSARA 372
           ER + AA  V   G++ +  ++SS   +D  + LY LH+ AT+GPC  P+P A     ++
Sbjct: 15  ERFYAAASYVGLDGSQSSVKQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQS 74

Query: 373 NWNAWKQLGNMTPEIAMEQYVTILSRSIPGC 403
            W +W+ LG M    AM  +V IL  + PG 
Sbjct: 75  KWKSWQGLGTMPSIEAMRLFVKILEEADPGW 105

Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with oleoyl-CoA, barely with palmitoyl-CoA, but not with arachidonyl-CoA. May function as an intracellular carrier of acyl-CoA esters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)

Query: 316 ERLFGAA--VAFVGNKCNAGR-ISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARA 372
           ER + AA  V   G+  +A   IS    D  + LY L++ ATVGPC  P+P A +   ++
Sbjct: 14  ERFYAAASYVGLDGSDSSAKNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQS 73

Query: 373 NWNAWKQLGNMTPEIAMEQYVTILSRSIPGC 403
            W +W+ LG M    AM  +V IL    PG 
Sbjct: 74  KWKSWQGLGTMPSIEAMRLFVKILEEDDPGW 104

Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with oleoyl-CoA, barely with palmitoyl-CoA, but not with arachidonyl-CoA. May function as an intracellular carrier of acyl-CoA esters. Plays a role in the biosynthesis of membrane lipids including galactolipids and phospholipids.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9WUR2|ECI2_MOUSE Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2 PE=1 SV=2

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 38/58 (65%)

Query: 339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL 396
           G++VK++LY L+K AT GPC  P+P  L    +A W+AW  LG++  E A + YV ++
Sbjct: 56  GNEVKLRLYALYKQATEGPCNMPKPGMLDFVNKAKWDAWNALGSLPKETARQNYVDLV 113

Able to isomerize both 3-cis and 3-trans double bonds into the 2-trans form in a range of enoyl-CoA species. Has a preference for 3-trans substrates.

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 8

>sp|O75521|ECI2_HUMAN Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2 PE=1 SV=4

 Score = 59.3 bits (142), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query: 339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV 393
           G++VK++LY L+K AT GPC  P+P    +  +A W+AW  LG++  E A + YV
Sbjct: 58  GNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYV 112

Able to isomerize both 3-cis and 3-trans double bonds into the 2-trans form in a range of enoyl-CoA species. Has a preference for 3-trans substrates.

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 8

>sp|Q5XIC0|ECI2_RAT Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus GN=Eci2 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL 396
           G++VK++LY L+K AT GPC  P+P       +A W+AW  LG++  E A + YV ++
Sbjct: 56  GNEVKLRLYALYKQATEGPCTMPKPGVFDFVNKAKWDAWNALGSLPKETARQNYVDLV 113

Able to isomerize both 3-cis and 3-trans double bonds into the 2-trans form in a range of enoyl-CoA species. Has a preference for 3-trans substrates.

Rattus norvegicus (taxid: 10116)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 8

>sp|Q54GC8|ACBD6_DICDI Acyl-CoA-binding domain-containing protein 6 homolog OS=Dictyostelium discoideum GN=acbd6 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARAN 373
           ++E  F  AV ++ N  N+G++S+I ++ ++ LY  +K AT+G C    P       ++ 
Sbjct: 5   QIENKFKLAVDYITN--NSGKLSNIKNEEQLYLYCNYKQATIGDCNTKAPPFYDYIGKSK 62

Query: 374 WNAWKQLGNMTPEIAMEQYVTILSRSIPG 402
           WN+W  L  +   +AM  Y+++++   PG
Sbjct: 63  WNSWNSLKGVEKIVAMNSYISLVNALSPG 91

Binds long-chain acyl-coenzyme A molecules with a strong preference for unsaturated C18:1-CoA. Does not bind fatty acids.

Dictyostelium discoideum (taxid: 44689)

>sp|Q502L1|ACB5A_DANRE Acyl-CoA-binding domain-containing protein 5A OS=Danio rerio GN=acbd5a PE=2 SV=1

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 308 EGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALK 367
           EG      E+ F AAV  + N    G       D+ ++ Y  +K AT GPC  P+P    
Sbjct: 2   EGDSNPLYEQRFNAAVKVIQNLPPNGSFQP-SHDMMLKFYSYYKQATQGPCNIPRPGFWD 60

Query: 368 VSARANWNAWKQLGNMTPEIAMEQYVTIL 396
              +A W+AW  LG M  E AM  YV  L
Sbjct: 61  PVGKAKWDAWSSLGEMPKEEAMAAYVDDL 89

Binds medium- and long-chain acyl-CoA esters.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	430
428754004	273	acyl-CoA binding protein 3A [Vernicia fo	0.251	0.395	0.623	2e-35
356496959	294	PREDICTED: uncharacterized protein LOC10	0.3	0.438	0.579	9e-35
224063459	362	predicted protein [Populus trichocarpa]	0.253	0.301	0.614	1e-34
356564133	408	PREDICTED: acyl-CoA-binding domain-conta	0.283	0.299	0.548	2e-34
428754008	375	acyl-CoA binding protein 3B [Vernicia fo	0.241	0.277	0.605	2e-34
224137718	375	predicted protein [Populus trichocarpa]	0.237	0.272	0.626	4e-34
363814555	397	uncharacterized protein LOC100794328 [Gl	0.274	0.297	0.568	2e-33
359480632	498	PREDICTED: uncharacterized protein LOC10	0.230	0.198	0.717	2e-32
358249288	295	uncharacterized protein LOC100813431 [Gl	0.304	0.444	0.557	2e-32
30686450	364	acyl-CoA-binding domain 3 [Arabidopsis t	0.369	0.436	0.466	3e-32

>gi|428754004|gb|AFZ62127.1| acyl-CoA binding protein 3A [Vernicia fordii] gi|428754006|gb|AFZ62128.1| acyl-CoA binding protein 3A [Vernicia fordii]

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 89/109 (81%), Gaps = 1/109 (0%)

Query: 302 DEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSD-VKMQLYGLHKIATVGPCRE 360
           DE+DDWEGIER+ELE+ FGAAVA+VG+  NA ++SS  S+ +K+QLYGLH++A  GPC  
Sbjct: 157 DEEDDWEGIERSELEKRFGAAVAYVGSIDNANKLSSTLSNGLKLQLYGLHQVAIEGPCHL 216

Query: 361 PQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIG 409
           PQPM LK SAR+ WNAW+QLGNM+PE+AMEQY+ ++S SIP  ++D  G
Sbjct: 217 PQPMPLKFSARSKWNAWQQLGNMSPEMAMEQYINLVSTSIPEWMKDAFG 265

Source: Vernicia fordii

Species: Vernicia fordii

Genus: Vernicia

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496959|ref|XP_003517332.1| PREDICTED: uncharacterized protein LOC100812452 [Glycine max]

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 80/138 (57%), Positives = 101/138 (73%), Gaps = 9/138 (6%)

Query: 270 RSEEIEVLESNCD---NEIGERNRDEEDDVKVVSFDEDDDWEGIERTELERLFGAAVAFV 326
           + EE+E+  S C+   NEI E + +EE      S  ++DDWEGIERTELER FGAAV FV
Sbjct: 146 KVEEVEI--SQCERYYNEIEESSMNEEMGENKGSVVDEDDWEGIERTELERRFGAAVVFV 203

Query: 327 GNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPE 386
           G+K NA    ++ +DVKM+L+G H+IAT GPC EPQPMALK SARA W AW+QLG M+PE
Sbjct: 204 GSKSNA----NLSNDVKMKLHGYHRIATQGPCHEPQPMALKFSARAKWIAWRQLGIMSPE 259

Query: 387 IAMEQYVTILSRSIPGCI 404
            AMEQY+++LS +IP  I
Sbjct: 260 EAMEQYISLLSENIPDWI 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063459|ref|XP_002301155.1| predicted protein [Populus trichocarpa] gi|222842881|gb|EEE80428.1| predicted protein [Populus trichocarpa]

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/114 (61%), Positives = 88/114 (77%), Gaps = 5/114 (4%)

Query: 299 VSFDEDDDWEGIERTELERLFGAAVAFV---GNKCNAGRISSIGSDVKMQLYGLHKIATV 355
           V+ DEDDDWEGIER+ELE +FG A  FV   G+K   GR + +GSDV+M+LYGLHK+AT 
Sbjct: 184 VNDDEDDDWEGIERSELETMFGEAARFVVESGDK--DGRFAGVGSDVQMELYGLHKVATE 241

Query: 356 GPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIG 409
           GPC +  PMALKVSARA WNAW++LGNM+PE AMEQY+ ++S   PG ++D  G
Sbjct: 242 GPCLQKPPMALKVSARAKWNAWQRLGNMSPEAAMEQYIVLVSDRAPGWMEDKPG 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564133|ref|XP_003550311.1| PREDICTED: acyl-CoA-binding domain-containing protein 3 [Glycine max]

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 97/135 (71%), Gaps = 13/135 (9%)

Query: 272 EEIEVLESNCDNEIGERNRDEEDDVKVVSFDEDDDWEGIERTELERLFGAAVAFVGNKCN 331
           EEI V  S  D++ G+ N D          D DDDWEGIER+ELE+ F AA  FV  + N
Sbjct: 225 EEINVEPSVVDSD-GKENED----------DYDDDWEGIERSELEKEFMAATEFVSGEEN 273

Query: 332 AGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQ 391
             R+  +GS+++M+LYGL+K+AT G CREPQPMALK++ARA WNAW++LGNM PE+AMEQ
Sbjct: 274 --RLGGVGSNLRMELYGLYKVATEGLCREPQPMALKLAARAKWNAWQKLGNMNPEVAMEQ 331

Query: 392 YVTILSRSIPGCIQD 406
           Y+++LS   PG I+D
Sbjct: 332 YISLLSDKFPGWIKD 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|428754008|gb|AFZ62129.1| acyl-CoA binding protein 3B [Vernicia fordii] gi|428754010|gb|AFZ62130.1| acyl-CoA binding protein 3B [Vernicia fordii]

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 63/104 (60%), Positives = 84/104 (80%)

Query: 303 EDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ 362
           ++DDWEGIER+ELE++F  A  FV +      ++S+GSDV+M+LYGLHK+AT GPCRE  
Sbjct: 210 DEDDWEGIERSELEQIFAKAAKFVESGDKDEGLTSVGSDVQMELYGLHKVATEGPCREQP 269

Query: 363 PMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQD 406
           PMALKV+ARA WNAW++LGNM PE+AMEQYV ++S  +PG ++D
Sbjct: 270 PMALKVAARAKWNAWQRLGNMNPEVAMEQYVALVSDKVPGWMED 313

Source: Vernicia fordii

Species: Vernicia fordii

Genus: Vernicia

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137718|ref|XP_002327195.1| predicted protein [Populus trichocarpa] gi|222835510|gb|EEE73945.1| predicted protein [Populus trichocarpa]

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/107 (62%), Positives = 86/107 (80%), Gaps = 5/107 (4%)

Query: 303 EDDDWEGIERTELERLFGAAVAFV---GNKCNAGRISSIGSDVKMQLYGLHKIATVGPCR 359
           +DDDWEGIER+ELE++FG A  FV   GNK    R++S+GSD++M+LYGLHKIAT GPCR
Sbjct: 201 DDDDWEGIERSELEKIFGEAAKFVEESGNKDE--RLASVGSDLQMELYGLHKIATEGPCR 258

Query: 360 EPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQD 406
           E  PMALKVSARA WNAW++LGNM+PE AMEQY+ ++    PG +++
Sbjct: 259 EQPPMALKVSARAKWNAWQRLGNMSPEAAMEQYIALVLERAPGWMEE 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814555|ref|NP_001242753.1| uncharacterized protein LOC100794328 [Glycine max] gi|255635139|gb|ACU17926.1| unknown [Glycine max]

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 94/125 (75%), Gaps = 7/125 (5%)

Query: 307 WEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMAL 366
           WEGIER+ELE+ F AA  FV  + N  R+   GS+++M+LYGLH++AT GPCREPQPMAL
Sbjct: 237 WEGIERSELEKEFMAATKFVNGEEN--RLGGAGSNLRMELYGLHQVATEGPCREPQPMAL 294

Query: 367 KVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQD---GIG--VSIYFESTQSIS 421
           K++ARA WNAW++LGNM PE+AMEQYV++LS   PG ++D   GIG   +   E ++S +
Sbjct: 295 KLAARAKWNAWQKLGNMNPEVAMEQYVSLLSDKFPGWMKDTSAGIGEHETTRPEVSESAA 354

Query: 422 SVLST 426
           S LST
Sbjct: 355 SDLST 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480632|ref|XP_002279459.2| PREDICTED: uncharacterized protein LOC100268114 [Vitis vinifera]

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/99 (71%), Positives = 84/99 (84%)

Query: 304 DDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQP 363
           DDDWEGI+R+EL+R FGAA AFVG++ NA  I ++ SDVKM LYGLHK+A  GPCREP P
Sbjct: 378 DDDWEGIQRSELDRAFGAAAAFVGSEKNANHILNLNSDVKMHLYGLHKVAIEGPCREPPP 437

Query: 364 MALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPG 402
           MALK+SARA WNAW++LGNM+PE AMEQYV +LSR IPG
Sbjct: 438 MALKISARAKWNAWQRLGNMSPEAAMEQYVALLSRDIPG 476

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249288|ref|NP_001240280.1| uncharacterized protein LOC100813431 [Glycine max] gi|255648403|gb|ACU24652.1| unknown [Glycine max]

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/140 (55%), Positives = 101/140 (72%), Gaps = 9/140 (6%)

Query: 270 RSEEIEVLESNCD---NEIGERNRDEEDDVKVVSFDEDDDWEGIERTELERLFGAAVAFV 326
           + EE+E+  S C+   NEI E + +EE      S  ++DDWEGIE TELER FGAAV FV
Sbjct: 146 KVEEVEI--SQCERNYNEIDESSMNEEIGENKGSVVDEDDWEGIESTELERRFGAAVVFV 203

Query: 327 GNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPE 386
           G+K NA    ++ +DVKM+L+G H+IAT GPC EPQPMALK SARA W A +QLG M+PE
Sbjct: 204 GSKSNA----NLSNDVKMKLHGYHRIATQGPCHEPQPMALKFSARAKWIARRQLGIMSPE 259

Query: 387 IAMEQYVTILSRSIPGCIQD 406
            AMEQ++++LS SIP  I++
Sbjct: 260 EAMEQFISLLSESIPDWIEE 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686450|ref|NP_849432.1| acyl-CoA-binding domain 3 [Arabidopsis thaliana] gi|222423449|dbj|BAH19695.1| AT4G24230 [Arabidopsis thaliana] gi|332659470|gb|AEE84870.1| acyl-CoA-binding domain 3 [Arabidopsis thaliana]

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 113/165 (68%), Gaps = 6/165 (3%)

Query: 257 VKSESAITEVGMARSEEIEVLESNCDNEIGERNRDEEDDVKV-VSFDEDDDWEGIERTEL 315
           V++E +  +V +A SEE+ V +S+  N + E + + E++ K  ++ +EDDDWEGIER+EL
Sbjct: 174 VENEESGGDVLVAESEEVRVEKSS--NMVEESDAEAENEEKTELTIEEDDDWEGIERSEL 231

Query: 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWN 375
           E+ F AAV  +     +G+   IG++ KM+L+GLHKIAT G CRE QPMA+ +SARA WN
Sbjct: 232 EKAFAAAVNLLEE---SGKAEEIGAEAKMELFGLHKIATEGSCREAQPMAVMISARAKWN 288

Query: 376 AWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQSI 420
           AW++LGNM+ E AMEQY+ ++S+ IPG  + G  V    E   S+
Sbjct: 289 AWQKLGNMSQEEAMEQYLALVSKEIPGLTKAGHTVGKMSEMETSV 333

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	430
TAIR|locus:2135947	366	ACBP3 "acyl-CoA-binding domain	0.641	0.754	0.332	1.3e-34
TAIR|locus:2137380	354	ACBP2 "AT4G27780" [Arabidopsis	0.367	0.446	0.408	2.4e-28
TAIR|locus:2178426	338	ACBP1 "acyl-CoA binding protei	0.355	0.452	0.382	2.4e-28
UNIPROTKB|F6QBK4	198	ECI2 "Uncharacterized protein"	0.139	0.303	0.433	8.8e-10
UNIPROTKB|F1LLU7	197	ECI2 "Enoyl-CoA delta isomeras	0.146	0.319	0.412	1.5e-09
UNIPROTKB|F8WAW4	140	ECI2 "Enoyl-CoA delta isomeras	0.146	0.45	0.412	1.5e-09
WB|WBGene00018949	146	acbp-4 [Caenorhabditis elegans	0.181	0.534	0.405	1.1e-08
UNIPROTKB|C9JB63	220	ECI2 "Enoyl-CoA delta isomeras	0.146	0.286	0.412	3.2e-08
ZFIN|ZDB-GENE-040718-392	392	zgc:92030 "zgc:92030" [Danio r	0.146	0.160	0.453	4.6e-08
UNIPROTKB|F1MWY9	374	ECI2 "Uncharacterized protein"	0.139	0.160	0.433	1.5e-07

TAIR|locus:2135947 ACBP3 "acyl-CoA-binding domain 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 100/301 (33%), Positives = 165/301 (54%)

Query:   137 KDEVSVARSEEIEFLESKCEARKIQKDDGGKCSTFDCKEMLMDKNNFFESEKMAKIEAES 196
             K E+ V  +E++ F   K +AR ++     +    D    L+D+    E++++ +++   
Sbjct:    41 KPEIGVGVTEDVRF-GMKMDARVLESQRNFQ--VVDENVELVDRFLSEEADRVYEVDEAV 97

Query:   197 TKTVTRMTESEETEVSKSNCDNEV--DEA-----NKNQEDGGES-SIFNC--KQILVYRS 246
             T       + E    + ++ +N V  +E         Q D  E+ SI +   + ++    
Sbjct:    98 TGNAKICGDREAESSAAASSENYVIAEEVILVRGQDEQSDSAEAESISSVSPENVVAEEI 157

Query:   247 NFFESENIA------AVKSESAITEVGMARSEEIEVLESNCDNEIGERNRDEEDDVKV-V 299
                  E +        V++E +  +V +A SEE+ V +S+  N + E + + E++ K  +
Sbjct:   158 KSQGQEEVTELGRSGCVENEESGGDVLVAESEEVRVEKSS--NMVEESDAEAENEEKTEL 215

Query:   300 SFDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCR 359
             + +EDDDWEGIER+ELE+ F AAV  +     +G+   IG++ KM+L+GLHKIAT G CR
Sbjct:   216 TIEEDDDWEGIERSELEKAFAAAVNLLEE---SGKAEEIGAEAKMELFGLHKIATEGSCR 272

Query:   360 EPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGIGVSIYFESTQS 419
             E QPMA+ +SARA WNAW++LGNM+ E AMEQY+ ++S+ IPG  + G  V    E   S
Sbjct:   273 EAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLALVSKEIPGLTKAGHTVGKMSEMETS 332

Query:   420 I 420
             +
Sbjct:   333 V 333

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA;ISS;IDA

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005615 "extracellular space" evidence=IDA

GO:0015908 "fatty acid transport" evidence=TAS

GO:0006952 "defense response" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0009617 "response to bacterium" evidence=IEP

GO:0009646 "response to absence of light" evidence=IEP

TAIR|locus:2137380 ACBP2 "AT4G27780" [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 69/169 (40%), Positives = 100/169 (59%)

Query:   249 FESENIAAVKS-ESAITEVGMARSEEIEVLESNC-------DNEIGERNRDEEDDVKVVS 300
             F+ +N++  +  E +  E+      +   L+S+C       D+ + E+     D V    
Sbjct:    31 FKEDNLSLTRHPEESQLEI-KPEGVDSRRLDSSCGGFGGEADSLVAEQGSSRSDSVAGDD 89

Query:   301 FDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISS-IGSDVKMQLYGLHKIATVGPCR 359
              +EDDDWEG+E TEL+  F AA  FV     A R+S  + SDV+ QLYGL+KIAT GPC 
Sbjct:    90 SEEDDDWEGVESTELDEAFSAATLFVTTAA-ADRLSQKVPSDVQQQLYGLYKIATEGPCT 148

Query:   360 EPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDGI 408
              PQP ALK++ARA W AW++LG M PE AME+Y+ I+++  P  +  G+
Sbjct:   149 APQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGV 197

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA;IDA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006869 "lipid transport" evidence=RCA;TAS

GO:0009514 "glyoxysome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010288 "response to lead ion" evidence=IEP

GO:0032791 "lead ion binding" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0010351 "lithium ion transport" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

TAIR|locus:2178426 ACBP1 "acyl-CoA binding protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 62/162 (38%), Positives = 100/162 (61%)

Query:   249 FESENIAAVKSESAITEV-GMARSEEIEVLESNCDNEIGERN--RDEEDDVKVVSFDEDD 305
             F+ EN++  ++ +  +E   + + E +  +    D+ I E+   R +ED+       +DD
Sbjct:    31 FKDENLSLTRNHTTQSEYENLRKVETLTGISGETDSLIAEQGSLRGDEDE------SDDD 84

Query:   306 DWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMA 365
             DWEG+E TEL+  F AA AFV    +      + +++++QLYGL+KIAT GPC  PQP A
Sbjct:    85 DWEGVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSA 144

Query:   366 LKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQDG 407
             LK++ARA W AW++LG M PE AME+Y+ ++++  P  ++ G
Sbjct:   145 LKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEGG 186

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0010288 "response to lead ion" evidence=IEP;IMP

GO:0032791 "lead ion binding" evidence=IDA

GO:0006629 "lipid metabolic process" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

GO:0070300 "phosphatidic acid binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0008289 "lipid binding" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010162 "seed dormancy process" evidence=IMP

GO:1900140 "regulation of seedling development" evidence=IMP

GO:0000062 "fatty-acyl-CoA binding" evidence=IDA

UNIPROTKB|F6QBK4 ECI2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:   339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSR 398
             G++VK++LY L+K AT GPC  P+P  L    +  W+AW  LG+++ E A + YV ++SR
Sbjct:    38 GNEVKLKLYALYKQATEGPCNVPKPGMLDFINKTKWDAWNALGSLSKEAARQNYVDLVSR 97

GO:0003824 "catalytic activity" evidence=IEA

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|F1LLU7 ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:   339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSR 398
             G++VK++LY L+K AT GPC  P+P    +  +A W+AW  LG++  E A + YV ++S 
Sbjct:    58 GNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSS 117

Query:   399 SIP 401
               P
Sbjct:   118 LSP 120

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F8WAW4 ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:   339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSR 398
             G++VK++LY L+K AT GPC  P+P    +  +A W+AW  LG++  E A + YV ++S 
Sbjct:    28 GNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSS 87

Query:   399 SIP 401
               P
Sbjct:    88 LSP 90

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

WB|WBGene00018949 acbp-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 32/79 (40%), Positives = 42/79 (53%)

Query:   315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
             L+  F AAV  +      G I +  +D ++Q+Y L+K AT G C   QP   ++  R  W
Sbjct:     5 LDEQFEAAVWIINALPKNGPIKTSIND-QLQMYSLYKQATSGKCDTIQPYFFQIEQRMKW 63

Query:   375 NAWKQLGNMTPEIAMEQYV 393
             NAW QLGNM    A  QYV
Sbjct:    64 NAWNQLGNMDEAEAKAQYV 82

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|C9JB63 ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 146 (56.5 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:   339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSR 398
             G++VK++LY L+K AT GPC  P+P    +  +A W+AW  LG++  E A + YV ++S 
Sbjct:   105 GNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSS 164

Query:   399 SIP 401
               P
Sbjct:   165 LSP 167

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

ZFIN|ZDB-GENE-040718-392 zgc:92030 "zgc:92030" [Danio rerio (taxid:7955)]

 Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 29/64 (45%), Positives = 44/64 (68%)

Query:   339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSR 398
             G++VK+++Y L K ATVGPC  P+P  L    +  W+AWK LG+++ E A +QYV ++S 
Sbjct:    58 GNEVKLKIYALFKQATVGPCNTPKPGMLDFVNKVKWDAWKGLGSISQEEARQQYVDLIS- 116

Query:   399 SIPG 402
             S+ G
Sbjct:   117 SLVG 120

GO:0008152 "metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|F1MWY9 ECI2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:   339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSR 398
             G++VK++LY L+K AT GPC  P+P  L    +  W+AW  LG+++ E A + YV ++SR
Sbjct:    38 GNEVKLKLYALYKQATEGPCNVPKPGMLDFINKTKWDAWNALGSLSKEAARQNYVDLVSR 97

GO:0009062 "fatty acid catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	430
pfam00887	87	pfam00887, ACBP, Acyl CoA binding protein	2e-22
cd00435	85	cd00435, ACBP, Acyl CoA binding protein (ACBP) bin	2e-15
PTZ00458	90	PTZ00458, PTZ00458, acyl CoA binding protein; Prov	2e-08
COG4281	87	COG4281, ACB, Acyl-CoA-binding protein [Lipid meta	7e-05

>gnl|CDD|216174 pfam00887, ACBP, Acyl CoA binding protein

 Score = 90.3 bits (225), Expect = 2e-22
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           LE  F AAV FV      GR S+   + K++LY L+K AT G    P+P    V  +A W
Sbjct: 1   LEEEFEAAVKFVKKLPKDGRPSN---EEKLKLYALYKQATEGDVNTPRPGMFDVIGKAKW 57

Query: 375 NAWKQLGNMTPEIAMEQYVTIL 396
           +AWK+L  M+ E AM++YV ++
Sbjct: 58  DAWKKLKGMSKEEAMKKYVELV 79

Length = 87

>gnl|CDD|238248 cd00435, ACBP, Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity

 Score = 70.8 bits (174), Expect = 2e-15
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           L+  F AA   V         +   ++ K+QLY L+K ATVG C   +P    +  RA W
Sbjct: 1   LQEEFEAAAEKVKK-----LKTKPSNEEKLQLYSLYKQATVGDCNTERPGMFDLKGRAKW 55

Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIP 401
           +AW  L  M+ E AM+ Y+  +   I 
Sbjct: 56  DAWNSLKGMSKEDAMKAYIAKVEELIA 82

Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected. Length = 85

>gnl|CDD|185637 PTZ00458, PTZ00458, acyl CoA binding protein; Provisional

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           +  LF   V+F+ +      +S    ++K+ LY  +K +TVG C   +P   K   R  +
Sbjct: 1   MADLFEECVSFINSLPKTVNLSV---EIKLDLYKYYKQSTVGNCNIKEPSMFKYQDRKKY 57

Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIP 401
            AWK + N+  E A ++YV I++   P
Sbjct: 58  EAWKSIENLNREDAKKRYVEIVTELFP 84

Length = 90

>gnl|CDD|226731 COG4281, ACB, Acyl-CoA-binding protein [Lipid metabolism]

 Score = 41.0 bits (96), Expect = 7e-05
 Identities = 15/58 (25%), Positives = 28/58 (48%)

Query: 339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL 396
            +D  ++LY L K  +VG     +P    +  R  + AW  L   + E A ++Y+ ++
Sbjct: 21  SNDELLKLYALFKQGSVGDNDGEKPGFFDIVGRYKYEAWAGLKGKSQEDARQEYIALV 78

Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	430
PTZ00458	90	acyl CoA binding protein; Provisional	99.96
cd00435	85	ACBP Acyl CoA binding protein (ACBP) binds thiol e	99.96
PF00887	87	ACBP: Acyl CoA binding protein; InterPro: IPR00058	99.96
KOG0817	142	consensus Acyl-CoA-binding protein [Lipid transpor	99.94
COG4281	87	ACB Acyl-CoA-binding protein [Lipid metabolism]	99.87
KOG3878	469	consensus Protein involved in maintenance of Golgi	99.06
smart00295	207	B41 Band 4.1 homologues. Also known as ezrin/radix	96.72
PF00373	126	FERM_M: FERM central domain; InterPro: IPR019748 T	96.06

>PTZ00458 acyl CoA binding protein; Provisional

Probab=99.96  E-value=2.1e-29  Score=208.04  Aligned_cols=87  Identities=29%  Similarity=0.547  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014136          317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL  396 (430)
Q Consensus       317 EkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIELV  396 (430)
                      +.|++|+.+|+.++..+   .++++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++||+++
T Consensus         3 ~~F~~A~~~v~~~~~~~---~~s~d~~L~lYalyKQAt~G~c~~~~P~~~d~~~raKw~AW~~l~~ms~~eA~~~YI~l~   79 (90)
T PTZ00458          3 DLFEECVSFINSLPKTV---NLSVEIKLDLYKYYKQSTVGNCNIKEPSMFKYQDRKKYEAWKSIENLNREDAKKRYVEIV   79 (90)
T ss_pred             HHHHHHHHHHHhCCCCC---CCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            56999999999988643   589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccCCccC
Q 014136          397 SRSIPGCIQD  406 (430)
Q Consensus       397 eELLP~W~s~  406 (430)
                      .++.|.|...
T Consensus        80 ~~l~~~w~~~   89 (90)
T PTZ00458         80 TELFPNWEKG   89 (90)
T ss_pred             HHHhhccccC
Confidence            9999999864

>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity

Probab=99.96  E-value=4.3e-29  Score=202.54  Aligned_cols=85  Identities=34%  Similarity=0.542  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT  394 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIE  394 (430)
                      |++.|++|+.+|++++.     .++++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||+.||+
T Consensus         1 ~~~~F~~A~~~v~~~~~-----~~~~~~~L~lYalyKQAt~G~~~~~~P~~~d~~~~~K~~AW~~l~~ms~~eA~~~YV~   75 (85)
T cd00435           1 LQEEFEAAAEKVKKLKT-----KPSNEEKLQLYSLYKQATVGDCNTERPGMFDLKGRAKWDAWNSLKGMSKEDAMKAYIA   75 (85)
T ss_pred             ChHHHHHHHHHHHhCCC-----CcCHHHHHHHHHHHHHhccCCCCCCCCCcccHhhHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            46789999999999884     6899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCc
Q 014136          395 ILSRSIPGCI  404 (430)
Q Consensus       395 LVeELLP~W~  404 (430)
                      ++++++|.|.
T Consensus        76 ~~~~l~~~~~   85 (85)
T cd00435          76 KVEELIAKYA   85 (85)
T ss_pred             HHHHHhhccC
Confidence            9999999984

Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected.

>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters []

Probab=99.96  E-value=2.6e-29  Score=201.03  Aligned_cols=87  Identities=41%  Similarity=0.694  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT  394 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIE  394 (430)
                      |+++|+.|+.+++.++..   ..++++++|+|||||||||+|||+.++|+++|+.+|+||+||++++|||+++||++||+
T Consensus         1 Le~~F~~A~~~v~~~~~~---~~~~~~~~L~LYalyKQAt~Gd~~~~~P~~~d~~~~~K~~AW~~l~gms~~eA~~~Yi~   77 (87)
T PF00887_consen    1 LEEEFEAAVEFVSNLPKK---SQLSNDDKLELYALYKQATHGDCDTPRPGFFDIEGRAKWDAWKALKGMSKEEAMREYIE   77 (87)
T ss_dssp             HHHHHHHHHHHHHHSSSC---STS-HHHHHHHHHHHHHHHTSS--S-CTTTTCHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcccc---CCCCHHHHHHHHHHHHHHHhCCCcCCCCcchhHHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence            789999999999999864   36999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCc
Q 014136          395 ILSRSIPGCI  404 (430)
Q Consensus       395 LVeELLP~W~  404 (430)
                      ++++++|.|.
T Consensus        78 ~v~~~~~~~~   87 (87)
T PF00887_consen   78 LVEELIPKYE   87 (87)
T ss_dssp             HHHHHHHHH-
T ss_pred             HHHHHHHhcC
Confidence            9999999873

ACBP is also known as diazepam binding inhibitor (DBI) or endozepine (EP) because of its ability to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor []. ACBP is a highly conserved protein of about 90 residues that is found in all four eukaryotic kingdoms, Animalia, Plantae, Fungi and Protista, and in some eubacterial species []. Although ACBP occurs as a completely independent protein, intact ACB domains have been identified in a number of large, multifunctional proteins in a variety of eukaryotic species. These include large membrane-associated proteins with N-terminal ACB domains, multifunctional enzymes with both ACB and peroxisomal enoyl-CoA Delta(3), Delta(2)-enoyl-CoA isomerase domains, and proteins with both an ACB domain and ankyrin repeats (IPR002110 from INTERPRO) []. The ACB domain consists of four alpha-helices arranged in a bowl shape with a highly exposed acyl-CoA-binding site. The ligand is bound through specific interactions with residues on the protein, most notably several conserved positive charges that interact with the phosphate group on the adenosine-3'phosphate moiety, and the acyl chain is sandwiched between the hydrophobic surfaces of CoA and the protein []. Other proteins containing an ACB domain include: Endozepine-like peptide (ELP) (gene DBIL5) from mouse []. ELP is a testis-specific ACBP homologue that may be involved in the energy metabolism of the mature sperm. MA-DBI, a transmembrane protein of unknown function which has been found in mammals. MA-DBI contains a N-terminal ACB domain. DRS-1 [], a human protein of unknown function that contains a N-terminal ACB domain and a C-terminal enoyl-CoA isomerase/hydratase domain. ; GO: 0000062 fatty-acyl-CoA binding; PDB: 2CB8_A 2FJ9_A 2LBB_A 1ST7_A 3EPY_B 2FDQ_C 1NTI_A 1HB8_A 1ACA_A 1NVL_A ....

>KOG0817 consensus Acyl-CoA-binding protein [Lipid transport and metabolism]

Probab=99.94  E-value=9.6e-27  Score=206.00  Aligned_cols=93  Identities=37%  Similarity=0.562  Sum_probs=87.2

Q ss_pred             cchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHH
Q 014136          312 RTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQ  391 (430)
Q Consensus       312 sedLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRK  391 (430)
                      ...+...|..|+..++++++     .|+++++|.|||||||||+|||++++||+||+++|+||+||++++|||+++||+.
T Consensus         2 ~~~~~~~Fe~a~~~~~~l~~-----~p~~ee~L~lYglyKQAt~G~~~~~kPg~~d~~~k~Kw~AW~~l~~~s~~eA~~~   76 (142)
T KOG0817|consen    2 AATLEAKFEAAAEAVKNLKK-----KPSNEELLKLYGLYKQATVGDCNTPKPGFFDEEGKAKWQAWNSLGGMSKEEAMEA   76 (142)
T ss_pred             cchHHHHHHHHHHHHHhccc-----CCCHHHHHHHHHHHHhhccCCCCCCCCchhhHHHHHHHHHHHhcCCCCHHHHHHH
Confidence            34678899999999999986     4899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCccCCCc
Q 014136          392 YVTILSRSIPGCIQDGIG  409 (430)
Q Consensus       392 YIELVeELLP~W~s~~~k  409 (430)
                      ||+++.+++|.|......
T Consensus        77 Yv~~~~~l~~~~~~~~~~   94 (142)
T KOG0817|consen   77 YVEKVEELIPKYGAEAET   94 (142)
T ss_pred             HHHHHHHHHHHhhccccc
Confidence            999999999999976543

>COG4281 ACB Acyl-CoA-binding protein [Lipid metabolism]

Probab=99.87  E-value=2.8e-22  Score=165.14  Aligned_cols=84  Identities=23%  Similarity=0.344  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT  394 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIE  394 (430)
                      +...|+.|...|+.|+.     .|++++.|+|||||||+++||.+..+|++||++||+||+||..|+|.|+++|.++||.
T Consensus         2 ~s~~Feqa~~dV~~L~~-----kP~~d~LLkLYAL~KQ~s~GD~~~ekPG~~d~~gr~K~eAW~~LKGksqedA~qeYia   76 (87)
T COG4281           2 LSTRFEQAQTDVKELSE-----KPSNDELLKLYALFKQGSVGDNDGEKPGFFDIVGRYKYEAWAGLKGKSQEDARQEYIA   76 (87)
T ss_pred             hhhHHHHHHHHHHHhcc-----CCCcHHHHHHHHHHHhccccccCCCCCCccccccchhHHHHhhccCccHHHHHHHHHH
Confidence            56789999999999986     6899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCC
Q 014136          395 ILSRSIPGC  403 (430)
Q Consensus       395 LVeELLP~W  403 (430)
                      +|+++...+
T Consensus        77 lVeeLkak~   85 (87)
T COG4281          77 LVEELKAKY   85 (87)
T ss_pred             HHHHHHhhc
Confidence            999997654

>KOG3878 consensus Protein involved in maintenance of Golgi structure and ER-Golgi transport [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.06  E-value=2.5e-10  Score=114.78  Aligned_cols=92  Identities=26%  Similarity=0.447  Sum_probs=83.5

Q ss_pred             cchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCC-CC--CCcChhhHHHHHHHHhcCCCCHHHH
Q 014136          312 RTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP-QP--MALKVSARANWNAWKQLGNMTPEIA  388 (430)
Q Consensus       312 sedLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtp-KP--S~fD~vGRAKWDAWKALKGMSKEEA  388 (430)
                      +-.|++.+..|+.|++..  .|++..++++++|.|-+|.||+.+||.|+. .|  |++|+.|+.+..+|..|+.||+++|
T Consensus        29 Gf~LeElY~LA~~fyKe~--~GKa~h~~YEd~lKLial~kQv~~Gp~n~d~~p~~G~lDv~GnDr~~~W~~LG~~sre~A  106 (469)
T KOG3878|consen   29 GFPLEELYRLAFTFYKEN--SGKAIHLSYEDNLKLIALKKQVALGPFNTDRAPALGVLDVIGNDRQQHWQLLGEISREQA  106 (469)
T ss_pred             CCCHHHHHHHHHHHHHhc--cCCccCCChhhhhhhhhhHhhhhcCCCCcccCcccceeecccChHHHHHHHHhcccHHHH
Confidence            467999999999999954  466778999999999999999999999974 34  7899999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCcc
Q 014136          389 MEQYVTILSRSIPGCIQ  405 (430)
Q Consensus       389 MRKYIELVeELLP~W~s  405 (430)
                      |..||.|++++++.|..
T Consensus       107 M~~FV~Lldr~C~~F~~  123 (469)
T KOG3878|consen  107 MEGFVDLLDRMCSAFRP  123 (469)
T ss_pred             HHHHHHHHHhcchhhhh
Confidence            99999999999999874

>smart00295 B41 Band 4

Probab=96.72  E-value=0.0074  Score=52.39  Aligned_cols=87  Identities=20%  Similarity=0.139  Sum_probs=62.7

Q ss_pred             chHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCC-------------CCC-cCh-------hhH
Q 014136          313 TELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ-------------PMA-LKV-------SAR  371 (430)
Q Consensus       313 edLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpK-------------PS~-fD~-------vGR  371 (430)
                      ..+.-.|..+..-+..-.     .+.+.++.+.|-||..|+..||++.+.             |.. .+.       ..+
T Consensus        97 ~~~~~ly~Q~~~di~~g~-----~~~~~~~~~~Laal~~q~~~gd~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~  171 (207)
T smart00295       97 TRLNLLYLQVRNDILEGR-----LPCPEEEALLLAALALQAEFGDYDEELHVLLKELSLKRFLPKQLLDSEKRTLKEWRE  171 (207)
T ss_pred             HHHHHHHHHHHHHHHcCc-----cCCCHHHHHHHHHHHHHHHhcCCChHhcCCccccccceeCChhhhhhccccHHHHHH
Confidence            335556777777665432     257799999999999999999998532             211 111       122


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHhhccCCcc
Q 014136          372 ANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQ  405 (430)
Q Consensus       372 AKWDAWKALKGMSKEEAMRKYIELVeELLP~W~s  405 (430)
                      .=.++|+++.|||+.+||.+||+++.++ |.|..
T Consensus       172 ~i~~~~~~~~~~s~~~a~~~yl~~~~~l-p~fG~  204 (207)
T smart00295      172 RIVSLHKELIGLSPEEAKLKYLELAEKL-PTYGV  204 (207)
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHhccc-cccCc
Confidence            2337899999999999999999999987 77653

1 homologues. Also known as ezrin/radixin/moesin (ERM) protein domains. Present in myosins, ezrin, radixin, moesin, protein tyrosine phosphatases. Plasma membrane-binding domain. These proteins play structural and regulatory roles in the assembly and stabilization of specialized plasmamembrane domains. Some PDZ domain containing proteins bind one or more of this family. Now includes JAKs.

>PF00373 FERM_M: FERM central domain; InterPro: IPR019748 The FERM domain (F for 4

Probab=96.06  E-value=0.04  Score=44.70  Aligned_cols=86  Identities=23%  Similarity=0.241  Sum_probs=58.3

Q ss_pred             chHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCC---CCC-------------cC-------hh
Q 014136          313 TELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ---PMA-------------LK-------VS  369 (430)
Q Consensus       313 edLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpK---PS~-------------fD-------~v  369 (430)
                      ..+.--|..+...|-.    |. ..++.++-++|-||.-|+..||++...   .+.             +-       ..
T Consensus         9 ~~~~lly~Q~~~~vl~----g~-~~~~~e~a~~LAAl~~q~~~gd~~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~   83 (126)
T PF00373_consen    9 ITRHLLYLQARRDVLQ----GR-LPCSEEDAIKLAALQLQAEYGDYNSEQEHSSGYIDPEIKEFQLENFIPKAPKLIKKM   83 (126)
T ss_dssp             HHHHHHHHHHHHHHHT----TS-STS-HHHHHHHHHHHHHHHHTSSTTTTTSSTTTTTGSHHCTCGHGTSSHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHc----Cc-CCCCHHHHHHHHHHHHHHHhcCCCcccccCcccccccccchhhhhhhhhhHHHHhhh
Confidence            4455566777766643    22 268999999999999999999998321   111             11       01


Q ss_pred             hHHHH-----HHHHhcCCCCHHHHHHHHHHHHHhhccCCc
Q 014136          370 ARANW-----NAWKQLGNMTPEIAMEQYVTILSRSIPGCI  404 (430)
Q Consensus       370 GRAKW-----DAWKALKGMSKEEAMRKYIELVeELLP~W~  404 (430)
                      ....|     ..|+++.|||+.+||..|++++.++ |.|.
T Consensus        84 ~~~~~~~~I~~~~~~l~~~s~~~a~~~fl~~~~~~-p~yG  122 (126)
T PF00373_consen   84 KQKEWEKRILEQHKKLRGMSPEEAKLQFLQICQSL-PTYG  122 (126)
T ss_dssp             THHHHHHHHHHHHHHTTT--HHHHHHHHHHHHCTS-TTTT
T ss_pred             hHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhcC-CCCC
Confidence            22233     7899999999999999999999974 6554

1 protein, E for ezrin, R for radixin and M for moesin) is a widespread protein module involved in localising proteins to the plasma membrane []. FERM domains are found in a number of cytoskeletal-associated proteins that associate with various proteins at the interface between the plasma membrane and the cytoskeleton. The FERM domain is located at the N terminus of the majority of FERM-containing proteins [, ], which includes: Band 4.1, which links the spectrin-actin cytoskeleton of erythrocytes to the plasma membrane. Ezrin, a component of the undercoat of the microvilli plasma membrane. Moesin, which is probably involved in binding major cytoskeletal structures to the plasma membrane. Radixin, which is involved in the binding of the barbed end of actin filaments to the plasma membrane in the undercoat of the cell- to-cell adherens junction. Talin, a cytoskeletal protein concentrated in regions of cell-substratum contact and, in lymphocytes, of cell-cell contacts. Filopodin, a slime mold protein that binds actin and which is involved in the control of cell motility and chemotaxis. Merlin (or schwannomin). Protein NBL4. Unconventional myosins X, VIIa and XV, which are mutated in congenital deafness. Focal-adhesion kinases (FAKs), cytoplasmic protein tyrosine kinases involved in signalling through integrins. Janus tyrosine kinases (JAKs), cytoplasmic tyrosine kinases that are non-covalently associated with the cytoplasmic tails of receptors for cytokines or polypeptidic hormones. Non-receptor tyrosine-protein kinase TYK2. Protein-tyrosine phosphatases PTPN3 and PTPN4, enzyme that appear to act at junctions between the membrane and the cytoskeleton. Protein-tyrosine phosphatases PTPN14 and PTP-D1, PTP-RL10 and PTP2E. Caenorhabditis elegans protein phosphatase ptp-1. Ezrin, moesin, and radixin are highly related proteins (ERM protein family), but the other proteins in which the FERM domain is found do not share any region of similarity outside of this domain. ERM proteins are made of three domains, the FERM domain, a central helical domain and a C-terminal tail domain, which binds F-actin. The amino-acid sequence of the FERM domain is highly conserved among ERM proteins and is responsible for membrane association by direct binding to the cytoplasmic domain or tail of integral membrane proteins. ERM proteins are regulated by an intramolecular association of the FERM and C-terminal tail domains that masks their binding sites for other molecules. For cytoskeleton-membrane cross-linking, the dormant molecules becomes activated and the FERM domain attaches to the membrane by binding specific membrane proteins, while the last 34 residues of the tail bind actin filaments. Aside from binding to membranes, the activated FERM domain of ERM proteins can also bind the guanine nucleotide dissociation inhibitor of Rho GTPase (RhoDGI), which suggests that in addition to functioning as a cross-linker, ERM proteins may influence Rho signalling pathways. The crystal structure of the FERM domain reveals that it is composed of three structural modules (F1, F2, and F3) that together form a compact clover-shaped structure []. The FERM domain has also been called the amino-terminal domain, the 30kDa domain, 4.1N30, the membrane-cytoskeletal-linking domain, the ERM-like domain, the ezrin-like domain of the band 4.1 superfamily, the conserved N-terminal region, and the membrane attachment domain [].; PDB: 4DXA_B 2EMS_A 2ZPY_A 1J19_A 2D10_B 2D11_B 1GC6_A 2D2Q_A 2EMT_A 2YVC_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	430
2cqu_A	116	Solution Structure Of Rsgi Ruh-045, A Human Acyl-Co		1e-08
2lbb_A	96	Solution Structure Of Acyl Coa Binding Protein From		1e-07
2cop_A	109	Solution Structure Of Rsgi Ruh-040, An Acbp Domain		3e-07
2wh5_A	106	Crystal Structure Of Human Acyl-Coa Binding Domain		4e-07
3flv_A	119	The Crystal Structure Of Human Acyl-Coenzymea Bindi		5e-06
1hbk_A	89	Acyl-Coa Binding Protein From Plasmodium Falciparum		1e-05

>pdb|2CQU|A Chain A, Solution Structure Of Rsgi Ruh-045, A Human Acyl-Coa Binding Protein Length = 116

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 339 GSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV 393
           G++VK++LY L+K AT GPC  P+P    +  +A W+AW  LG++  E A + YV
Sbjct: 35  GNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYV 89

>pdb|2LBB|A Chain A, Solution Structure Of Acyl Coa Binding Protein From Babesia Bovis T2bo Length = 96

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 319 FGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWK 378
           F AAV +V N           +D K+  Y  +K ATVG C +P+P  L++  +  W AW 
Sbjct: 14  FDAAVKYVSNTTTM----MASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWN 69
Query: 379 QLGNMTPEIAMEQYVTILSRSIP 401
            L  M+ E A E YV +L    P
Sbjct: 70  ALRGMSTESAKEAYVKLLDTLAP 92

>pdb|2COP|A Chain A, Solution Structure Of Rsgi Ruh-040, An Acbp Domain From Human Cdna Length = 109

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           L  LF  A A +      G I     +  + LY  +K   VG C  P+P       +  W
Sbjct: 8   LAELFEKAAAHL-----QGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKW 62
Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIPG 402
            AWK LG+ +P  AM++Y+ ++ +  PG
Sbjct: 63  EAWKALGDSSPSQAMQEYIAVVKKLDPG 90

>pdb|2WH5|A Chain A, Crystal Structure Of Human Acyl-Coa Binding Domain 4 Complexed With Stearoyl-Coa Length = 106

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARAN 373
           + ++ F AAV+ + N    G       ++ ++ Y  +K AT+GPC  P+P       R  
Sbjct: 7   DCQKQFQAAVSVIQNLPKNGSYRPSYEEM-LRFYSYYKQATMGPCLVPRPGFWDPIGRYK 65
Query: 374 WNAWKQLGNMTPEIAMEQYVT 394
           W+AW  LG M+ E AM  Y+T
Sbjct: 66  WDAWNSLGKMSREEAMSAYIT 86

>pdb|3FLV|A Chain A, The Crystal Structure Of Human Acyl-Coenzymea Binding Domain Containing 5 Length = 119

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWN 375
           E  F AAV  + +    G      +++ ++ Y  +K AT GPC+  +P       R  W+
Sbjct: 25  ETRFEAAVKVIQSLPKNGSFQPT-NEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWD 83
Query: 376 AWKQLGNMTPEIAMEQYV 393
           AW  LG+MT E AM  YV
Sbjct: 84  AWSSLGDMTKEEAMIAYV 101

>pdb|1HBK|A Chain A, Acyl-Coa Binding Protein From Plasmodium Falciparum Length = 89

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           + ++F   V+F+       R  ++ +++K+ LY  +K +T+G C   +P A K   R  +
Sbjct: 2   MAQVFEECVSFING---LPRTINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKY 58
Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIP 401
            AWK + N+  E A ++YV I+S   P
Sbjct: 59  EAWKSVENLNREDAQKRYVDIVSEIFP 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	430
1hbk_A	89	ACBP, acyl-COA binding protein; fatty acid metabol	8e-23
3flv_A	119	Acyl-COA-binding domain-containing protein 5; lipi	2e-22
1st7_A	86	ACBP, acyl-COA-binding protein; four helix bundle,	2e-21
2wh5_A	106	Acyl-COA-binding domain-containing protein 4; alte	1e-20
2lbb_A	96	Acyl COA binding protein; protein binding, structu	1e-20
3epy_A	89	Acyl-COA-binding domain-containing protein 7; acyl	1e-20
2cb8_A	87	Acyl-COA-binding protein; acyl-coenzyme A binding	1e-19
2cqu_A	116	Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi	3e-19
3fp5_A	106	Acyl-COA binding protein; ACBP, cacao disease, fat	3e-19
2cop_A	109	Acyl-coenzyme A binding domain containing 6; acyl	7e-19
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09

>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1 Length = 89

 Score = 91.1 bits (226), Expect = 8e-23
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           + ++F   V+F+        + +   ++K+ LY  +K +T+G C   +P A K   R  +
Sbjct: 2   MAQVFEECVSFINGLPRTINLPN---ELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKY 58

Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIPG 402
            AWK + N+  E A ++YV I+S   P 
Sbjct: 59  EAWKSVENLNREDAQKRYVDIVSEIFPY 86

>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens} Length = 119

 Score = 90.9 bits (225), Expect = 2e-22
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%)

Query: 302 DEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP 361
            +        ++  E  F AAV  + +    G      +++ ++ Y  +K AT GPC+  
Sbjct: 11  VDLGTENLYFQSMHETRFEAAVKVIQSLPKNGSFQ-PTNEMMLKFYSFYKQATEGPCKLS 69

Query: 362 QPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIP 401
           +P       R  W+AW  LG+MT E AM  YV  + + I 
Sbjct: 70  RPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKIIE 109

>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae} Length = 86

 Score = 86.9 bits (215), Expect = 2e-21
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           + +LF      V         +   +D  ++LY L+K ATVG   + +P    +  R  W
Sbjct: 1   VSQLFEEKAKAVNEL-----PTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKW 55

Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIP 401
            AW+ L   + E A ++Y+ ++ + I 
Sbjct: 56  EAWENLKGKSQEDAEKEYIALVDQLIA 82

>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens} Length = 106

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSA 370
              + ++ F AAV+ + N    G       +  ++ Y  +K AT+GPC  P+P       
Sbjct: 4   PEPDCQKQFQAAVSVIQNLPKNGS-YRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIG 62

Query: 371 RANWNAWKQLGNMTPEIAMEQYVTILSRSIP 401
           R  W+AW  LG M+ E AM  Y+T +     
Sbjct: 63  RYKWDAWNSLGKMSREEAMSAYITEMKLVAQ 93

>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis} Length = 96

 Score = 85.3 bits (211), Expect = 1e-20
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSA 370
                   F AAV +V N           +D K+  Y  +K ATVG C +P+P  L++  
Sbjct: 6   HHHMSADDFDAAVKYVSNTTTMM----ASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQE 61

Query: 371 RANWNAWKQLGNMTPEIAMEQYVTILSRSIPG 402
           +  W AW  L  M+ E A E YV +L    P 
Sbjct: 62  KYKWEAWNALRGMSTESAKEAYVKLLDTLAPS 93

>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} Length = 89

 Score = 84.9 bits (210), Expect = 1e-20
 Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 313 TELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARA 372
             L+  F  A   V         +        +LYGL+K A VG      P  L +  +A
Sbjct: 2   MALQADFDRAAEDVRKL-----KARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKA 56

Query: 373 NWNAWKQLGNMTPEIAMEQYVTILSRSIP 401
            W AW     ++ E A   Y++     I 
Sbjct: 57  KWEAWNLKKGLSTEDATSAYISKAKELIE 85

>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A Length = 87

 Score = 82.2 bits (203), Expect = 1e-19
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWN 375
           +  F  A   V +       +    +  + +YG +K ATVG     +P  L  + +A W+
Sbjct: 3   QAEFEKAAEEVRHL-----KTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWD 57

Query: 376 AWKQLGNMTPEIAMEQYVTILSRSIP 401
           AW +L   + E AM+ Y+  +     
Sbjct: 58  AWNELKGTSKEDAMKAYINKVEELKK 83

>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 82.4 bits (203), Expect = 3e-19
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 313 TELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARA 372
              ++ F  ++  V            G++VK++LY L+K AT GPC  P+P    +  +A
Sbjct: 14  RASQKDFENSMNQVKLL-----KKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKA 68

Query: 373 NWNAWKQLGNMTPEIAMEQYVTILSRSIP 401
            W+AW  LG++  E A + YV ++S   P
Sbjct: 69  KWDAWNALGSLPKEAARQNYVDLVSSLSP 97

>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} Length = 106

 Score = 81.9 bits (202), Expect = 3e-19
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
            +  F  AV  V              D ++  Y   K ATVG     +P  +  + +A W
Sbjct: 4   SKAKFDKAVEIV-QSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKW 62

Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIP 401
           +AWK +   + E+A ++YV  L   + 
Sbjct: 63  DAWKSVEGTSKEVAYQKYVEKLLEILK 89

>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 80.9 bits (199), Expect = 7e-19
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 313 TELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARA 372
           + L  LF  A A +        I     +  + LY  +K   VG C  P+P       + 
Sbjct: 6   SGLAELFEKAAAHLQGL-----IQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQ 60

Query: 373 NWNAWKQLGNMTPEIAMEQYVTILSRSIPG 402
            W AWK LG+ +P  AM++Y+ ++ +  PG
Sbjct: 61  KWEAWKALGDSSPSQAMQEYIAVVKKLDPG 90

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.1 bits (142), Expect = 2e-09
 Identities = 54/468 (11%), Positives = 126/468 (26%), Gaps = 174/468 (37%)

Query: 1   MEVFLE-FVLPIAFSLIFSFFLAKLFSLSSSPSTNCDCDLVSGLKPCKHFIQKVVTC-EQ 58
           + VF + FV       +     + L        +  + D +   K       ++      
Sbjct: 22  LSVFEDAFVDNFDCKDVQDMPKSIL--------SKEEIDHIIMSKDAVSGTLRLFWTLLS 73

Query: 59  RGSET---------EKTHGFVAKVVEGGSETQEKILLDDCCGSCDDVKIGDNEV------ 103
           +  E             + F+   ++  +E ++  ++        D    DN+V      
Sbjct: 74  KQEEMVQKFVEEVLRINYKFLMSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 104 --------LKEAEMERVVEEHFGEFGGGESESNAKFGTG---LTKDEVSVARSEEIEFLE 152
                   L++A +E    ++    G          G+G   +    + V  S +++   
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVL--------GSGKTWVA---LDVCLSYKVQ--- 177

Query: 153 SKCEARKIQKDDG------GKCSTFDCKEMLMDKNNFFESEKMAKIEAESTKTVTRMTES 206
                   + D          C++ +   + M +   ++ +      ++ +  +     S
Sbjct: 178 -------CKMDFKIFWLNLKNCNSPE-TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 207 EETEVSK-------SNC--------DNEVDEANKNQEDGGESSIFN--CKQILV---YRS 246
            + E+ +        NC        + +   A            FN  CK IL+   ++ 
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNA------------FNLSCK-ILLTTRFKQ 276

Query: 247 --NFFESENIAAVKSESAITEVGMARSEEIEVLES--NCDNE----------------IG 286
             +F  +     +  +     + +   E   +L    +C  +                I 
Sbjct: 277 VTDFLSAATTTHISLDH--HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 287 ERNRD---------------------------EEDDVK------VVSFDEDDD------- 306
           E  RD                           E  + +       V F            
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSAHIPTILLS 393

Query: 307 --WEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKI 352
             W  + ++++          V NK +  + S +    K     +  I
Sbjct: 394 LIWFDVIKSDVMV--------VVNKLH--KYSLVEKQPKESTISIPSI 431

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	430
1hbk_A	89	ACBP, acyl-COA binding protein; fatty acid metabol	99.97
1st7_A	86	ACBP, acyl-COA-binding protein; four helix bundle,	99.97
2cop_A	109	Acyl-coenzyme A binding domain containing 6; acyl	99.97
3epy_A	89	Acyl-COA-binding domain-containing protein 7; acyl	99.96
2cb8_A	87	Acyl-COA-binding protein; acyl-coenzyme A binding	99.96
2cqu_A	116	Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi	99.96
2wh5_A	106	Acyl-COA-binding domain-containing protein 4; alte	99.96
2lbb_A	96	Acyl COA binding protein; protein binding, structu	99.96
3flv_A	119	Acyl-COA-binding domain-containing protein 5; lipi	99.96
3fp5_A	106	Acyl-COA binding protein; ACBP, cacao disease, fat	99.96
1mix_A	206	Talin; focal adhesion, integrin binding, FERM doma	98.17
4f7g_A	222	Talin-1; alpha-helix bundle, integrin activation,	95.3
1ef1_A	294	Moesin; membrane, FERM domain, tail domain, membra	95.2
3qij_A	296	Protein 4.1; cytoskeleton, structural genomics, st	94.91
1h4r_A	314	Merlin; FERM, neurofibromatosis, NF2, structural p	94.34
3ivf_A	371	Talin-1; FERM domain, cell membrane, cell projecti	93.72
2i1j_A	575	Moesin; FERM, coiled-coil, C-ermad, ERM, radixin,	91.74
3au4_A	555	Myosin-X; protein-protein complex, motor protein c	90.95
2al6_A	375	Focal adhesion kinase 1; transferase; 2.35A {Gallu	89.03
4dxa_B	322	KREV interaction trapped protein 1; GTPase, FERM,	85.54

>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1

Probab=99.97  E-value=2.8e-31  Score=215.34  Aligned_cols=88  Identities=28%  Similarity=0.520  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT  394 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIE  394 (430)
                      |+++|.+|+.+|+.++..   ..|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||+++||++||+
T Consensus         2 l~~~F~~A~~~v~~l~~~---~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~   78 (89)
T 1hbk_A            2 MAQVFEECVSFINGLPRT---INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVD   78 (89)
T ss_dssp             HHHHHHHHHHHHHHSCTT---CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCc---CCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHH
Confidence            678999999999999841   36999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCcc
Q 014136          395 ILSRSIPGCIQ  405 (430)
Q Consensus       395 LVeELLP~W~s  405 (430)
                      ++++++|.|.+
T Consensus        79 ~v~~l~~~~~~   89 (89)
T 1hbk_A           79 IVSEIFPYWQD   89 (89)
T ss_dssp             HHHHHCTTTTC
T ss_pred             HHHHHcccccC
Confidence            99999999973

>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.3e-31  Score=214.75  Aligned_cols=85  Identities=26%  Similarity=0.443  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT  394 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIE  394 (430)
                      |+++|++|+.+|+.++.     .|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||+++||++||+
T Consensus         1 l~~~F~~A~~~v~~l~~-----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~   75 (86)
T 1st7_A            1 VSQLFEEKAKAVNELPT-----KPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIA   75 (86)
T ss_dssp             CHHHHHHHHHHHTSCSS-----CCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHccC-----CcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            46899999999999984     5899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCc
Q 014136          395 ILSRSIPGCI  404 (430)
Q Consensus       395 LVeELLP~W~  404 (430)
                      ++++++|.|.
T Consensus        76 ~v~~l~~~~~   85 (86)
T 1st7_A           76 LVDQLIAKYS   85 (86)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHhhhhc
Confidence            9999999996

>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.97  E-value=7.7e-31  Score=220.75  Aligned_cols=93  Identities=27%  Similarity=0.527  Sum_probs=87.7

Q ss_pred             ccchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHH
Q 014136          311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME  390 (430)
Q Consensus       311 esedLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMR  390 (430)
                      +.++|+++|.+|+.+|+.++.     .|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||+++||+
T Consensus         4 ~~~~l~~~F~~A~~~vk~l~~-----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~   78 (109)
T 2cop_A            4 GSSGLAELFEKAAAHLQGLIQ-----VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQ   78 (109)
T ss_dssp             CCCCSHHHHHHHHHHHTTSTT-----TSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHccc-----CCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHH
Confidence            456788999999999999975     589999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCccCCC
Q 014136          391 QYVTILSRSIPGCIQDGI  408 (430)
Q Consensus       391 KYIELVeELLP~W~s~~~  408 (430)
                      +||++|++++|.|.....
T Consensus        79 ~YI~lv~~l~~~~~~~~~   96 (109)
T 2cop_A           79 EYIAVVKKLDPGWNPQIP   96 (109)
T ss_dssp             HHHHHHHHHCTTCCCCCC
T ss_pred             HHHHHHHHHhhhhcccch
Confidence            999999999999997644

>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1

Probab=99.96  E-value=1.4e-30  Score=212.33  Aligned_cols=86  Identities=26%  Similarity=0.312  Sum_probs=82.4

Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHH
Q 014136          314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV  393 (430)
Q Consensus       314 dLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYI  393 (430)
                      .|+++|++|+++|+.++.     +|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++||
T Consensus         3 ~L~~~F~~A~~~vk~l~~-----~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi   77 (89)
T 3epy_A            3 ALQADFDRAAEDVRKLKA-----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI   77 (89)
T ss_dssp             HHHHHHHHHHHHGGGCSS-----CCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCC-----CcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence            489999999999999984     689999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCc
Q 014136          394 TILSRSIPGCI  404 (430)
Q Consensus       394 ELVeELLP~W~  404 (430)
                      +++++++|.|.
T Consensus        78 ~~v~~l~~ky~   88 (89)
T 3epy_A           78 SKAKELIEKYG   88 (89)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHhhhhc
Confidence            99999999874

>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A

Probab=99.96  E-value=6.3e-30  Score=207.24  Aligned_cols=84  Identities=25%  Similarity=0.366  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014136          316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTI  395 (430)
Q Consensus       316 EEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIEL  395 (430)
                      +++|++|+.+|+.++.     +|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++||++
T Consensus         3 ~~~F~~A~~~vk~l~~-----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~   77 (87)
T 2cb8_A            3 QAEFEKAAEEVRHLKT-----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINK   77 (87)
T ss_dssp             HHHHHHHHHHGGGCSS-----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccC-----CcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            5789999999999985     58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCc
Q 014136          396 LSRSIPGCI  404 (430)
Q Consensus       396 VeELLP~W~  404 (430)
                      +++++|.|.
T Consensus        78 v~~l~~~~~   86 (87)
T 2cb8_A           78 VEELKKKYG   86 (87)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999885

>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=215.59  Aligned_cols=92  Identities=30%  Similarity=0.545  Sum_probs=86.5

Q ss_pred             cchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHH
Q 014136          312 RTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQ  391 (430)
Q Consensus       312 sedLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRK  391 (430)
                      +.+|+++|++|+++|+.++.     .|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++
T Consensus        13 m~~~~~~F~~A~~~vk~l~~-----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~~   87 (116)
T 2cqu_A           13 MRASQKDFENSMNQVKLLKK-----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQN   87 (116)
T ss_dssp             CCCCHHHHHHHHHHHHHCCS-----CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHccC-----CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHH
Confidence            44578999999999999985     5899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCccCCC
Q 014136          392 YVTILSRSIPGCIQDGI  408 (430)
Q Consensus       392 YIELVeELLP~W~s~~~  408 (430)
                      ||+++++++|.|.+...
T Consensus        88 YI~lv~~l~~~~~~~~~  104 (116)
T 2cqu_A           88 YVDLVSSLSPSLESSSQ  104 (116)
T ss_dssp             HHHHHHHHCSCCCCCCC
T ss_pred             HHHHHHHHccccccccc
Confidence            99999999999997543

>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}

Probab=99.96  E-value=7.2e-30  Score=214.41  Aligned_cols=94  Identities=30%  Similarity=0.511  Sum_probs=84.4

Q ss_pred             ccchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHH
Q 014136          311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME  390 (430)
Q Consensus       311 esedLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMR  390 (430)
                      +..+|+++|++|+++|+.++..+. .+|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||+
T Consensus         4 ~~~~l~~~F~~A~~~vk~l~~~g~-~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~   82 (106)
T 2wh5_A            4 PEPDCQKQFQAAVSVIQNLPKNGS-YRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMS   82 (106)
T ss_dssp             -----CHHHHHHHHHHHHSCSSCS-CCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHhccccCC-CCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHH
Confidence            355688999999999999997553 4699999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCcc
Q 014136          391 QYVTILSRSIPGCIQ  405 (430)
Q Consensus       391 KYIELVeELLP~W~s  405 (430)
                      +||+++++++|.+.+
T Consensus        83 ~YI~~v~~l~~k~~~   97 (106)
T 2wh5_A           83 AYITEMKLVAQKVID   97 (106)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999998875

>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}

Probab=99.96  E-value=1.2e-29  Score=210.41  Aligned_cols=84  Identities=36%  Similarity=0.602  Sum_probs=80.3

Q ss_pred             HHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 014136          318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTILS  397 (430)
Q Consensus       318 kFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIELVe  397 (430)
                      +|++|+..|+++++    .+|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||+++||++||++++
T Consensus        13 ~F~~A~~~vk~l~~----~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv~   88 (96)
T 2lbb_A           13 DFDAAVKYVSNTTT----MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLLD   88 (96)
T ss_dssp             THHHHHHHHHHCCC----SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            79999999999984    26899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCcc
Q 014136          398 RSIPGCIQ  405 (430)
Q Consensus       398 ELLP~W~s  405 (430)
                      +++|.|.+
T Consensus        89 ~l~~~~~~   96 (96)
T 2lbb_A           89 TLAPSWRN   96 (96)
T ss_dssp             HHCGGGTC
T ss_pred             HHhchhcC
Confidence            99999973

>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=216.95  Aligned_cols=94  Identities=30%  Similarity=0.454  Sum_probs=86.5

Q ss_pred             ccchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHH
Q 014136          311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME  390 (430)
Q Consensus       311 esedLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMR  390 (430)
                      .+.+|+++|.+|+++|+.+|..++ .+|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||+
T Consensus        20 ~~~dLe~~F~~A~~~Vk~l~~~g~-~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~   98 (119)
T 3flv_A           20 FQSMHETRFEAAVKVIQSLPKNGS-FQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMI   98 (119)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHSS-CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHhCcccCC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHH
Confidence            578999999999999999997553 3689999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCcc
Q 014136          391 QYVTILSRSIPGCIQ  405 (430)
Q Consensus       391 KYIELVeELLP~W~s  405 (430)
                      +||++++++++...-
T Consensus        99 ~YI~~v~~l~~~~~~  113 (119)
T 3flv_A           99 AYVEEMKKIIETMPM  113 (119)
T ss_dssp             HHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhCCC
Confidence            999999999887653

>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0

Probab=99.96  E-value=2.6e-29  Score=211.19  Aligned_cols=87  Identities=26%  Similarity=0.434  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT  394 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIE  394 (430)
                      ++++|.+|+.+|+.++++++ .+|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||+++||++||+
T Consensus         4 ~~~~F~~A~~~vk~l~~~g~-~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI~   82 (106)
T 3fp5_A            4 SKAKFDKAVEIVQSLPKDGP-IKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVE   82 (106)
T ss_dssp             CHHHHHHHHHHHHHCCSSSS-SCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcccccC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence            57899999999999997653 46999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccC
Q 014136          395 ILSRSIPG  402 (430)
Q Consensus       395 LVeELLP~  402 (430)
                      ++.+++|.
T Consensus        83 ~v~~l~~~   90 (106)
T 3fp5_A           83 KLLEILKK   90 (106)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcc
Confidence            99999997

>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B

Probab=98.17  E-value=8.7e-06  Score=70.38  Aligned_cols=85  Identities=24%  Similarity=0.244  Sum_probs=65.9

Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCC--CCCCcChh------------hHHHHHHHHh
Q 014136          314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKVS------------ARANWNAWKQ  379 (430)
Q Consensus       314 dLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtp--KPS~fD~v------------GRAKWDAWKA  379 (430)
                      .+.--|..+..-+-.-    . .+.+.++.++|.||..||..||++..  .|+.+++.            .+.-+++|++
T Consensus        17 ~~~l~y~Q~~~dil~g----~-~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~   91 (206)
T 1mix_A           17 QLNLLYVQARDDILNG----S-HPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKN   91 (206)
T ss_dssp             HHHHHHHHHHHHHHTT----S-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCC----c-cccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHH
Confidence            3444566666666432    2 25789999999999999999999874  45554443            6788999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCc
Q 014136          380 LGNMTPEIAMEQYVTILSRSIPGCI  404 (430)
Q Consensus       380 LKGMSKEEAMRKYIELVeELLP~W~  404 (430)
                      ++|||+.+|+.+|++++.++ |.|.
T Consensus        92 ~~g~s~~~A~~~yL~~~~~l-~~yG  115 (206)
T 1mix_A           92 CGNMSEIEAKVRYVKLARSL-KTYG  115 (206)
T ss_dssp             TTTCCHHHHHHHHHHHHHHS-TTTT
T ss_pred             ccCCCHHHHHHHHHHHHHhC-cccC
Confidence            99999999999999999765 6555

>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}

Probab=95.30  E-value=0.04  Score=48.87  Aligned_cols=85  Identities=22%  Similarity=0.250  Sum_probs=58.7

Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCC--CCCcCh-----------h-hHHHHHHHHh
Q 014136          314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALKV-----------S-ARANWNAWKQ  379 (430)
Q Consensus       314 dLEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpK--PS~fD~-----------v-GRAKWDAWKA  379 (430)
                      .+.--|..+..-+-.    |. .+.+.++-+.|=||--||..||.+...  |+.+.+           . .+.=..+|++
T Consensus        28 ~l~l~ylQ~~~dil~----G~-~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~  102 (222)
T 4f7g_A           28 QLNLLYVQARDDILN----GS-HPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKN  102 (222)
T ss_dssp             HHHHHHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhC----Cc-ccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHh
Confidence            344445555554432    22 257899999999999999999998642  322111           1 1222468999


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCc
Q 014136          380 LGNMTPEIAMEQYVTILSRSIPGCI  404 (430)
Q Consensus       380 LKGMSKEEAMRKYIELVeELLP~W~  404 (430)
                      ++|||+.+|+.+|++++.++ |.|.
T Consensus       103 ~~g~s~~eA~~~yL~~~~~l-~~yG  126 (222)
T 4f7g_A          103 CGQMSEIEAKVRYVKLARSL-KTYG  126 (222)
T ss_dssp             TTTCCHHHHHHHHHHHHHTS-TTTT
T ss_pred             ccCCCHHHHHHHHHHHHhhc-cccC
Confidence            99999999999999999865 5554

>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A

Probab=95.20  E-value=0.043  Score=50.01  Aligned_cols=84  Identities=13%  Similarity=0.056  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCC--CCCcC-----hhh--------HHHH-----H
Q 014136          316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALK-----VSA--------RANW-----N  375 (430)
Q Consensus       316 EEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpK--PS~fD-----~vG--------RAKW-----D  375 (430)
                      .--|..+..-+-.    |. .+.+.++.+.|=||--||..||++...  |+.++     |..        ...|     .
T Consensus        97 ~l~y~Q~~~dil~----g~-~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~  171 (294)
T 1ef1_A           97 RLFFLQVKEGILN----DD-IYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQV  171 (294)
T ss_dssp             HHHHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc----Cc-ccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHH
Confidence            3345555555532    22 257889999999999999999998643  33321     111        2234     6


Q ss_pred             HHHhcCCCCHHHHHHHHHHHHHhhccCCcc
Q 014136          376 AWKQLGNMTPEIAMEQYVTILSRSIPGCIQ  405 (430)
Q Consensus       376 AWKALKGMSKEEAMRKYIELVeELLP~W~s  405 (430)
                      +|++++||++.+|+..|++++.+ +|.|..
T Consensus       172 ~~~~~~g~s~~~A~~~yL~~~~~-lp~yG~  200 (294)
T 1ef1_A          172 WHEEHRGMLREDAVLEYLKIAQD-LEMYGV  200 (294)
T ss_dssp             HHHHTTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred             HHHHccCCCHHHHHHHHHHHHcc-cCccCc
Confidence            89999999999999999999986 566653

>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A

Probab=94.91  E-value=0.051  Score=50.64  Aligned_cols=68  Identities=10%  Similarity=-0.028  Sum_probs=51.2

Q ss_pred             CCChhhHHHHHHHhhccccCCCCCC--CCCCcC-----h-----hhHHHHHHHHhcCCCCHHHHHHHHHHHHHhhccCCc
Q 014136          337 SIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----V-----SARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCI  404 (430)
Q Consensus       337 qpSdEdKLrLYGLYKQATvGDCNtp--KPS~fD-----~-----vGRAKWDAWKALKGMSKEEAMRKYIELVeELLP~W~  404 (430)
                      +.+.++.+.|=||--||..||++..  .|+.+.     +     ..+.=..+|+++.|||+.+|+..|++++.+ +|.|.
T Consensus       127 ~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~-l~~yG  205 (296)
T 3qij_A          127 PCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKK-LSMYG  205 (296)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTT-STTTT
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhc-ccccC
Confidence            4788999999999999999998742  222211     1     122223689999999999999999999987 57665


Q ss_pred             c
Q 014136          405 Q  405 (430)
Q Consensus       405 s  405 (430)
                      .
T Consensus       206 ~  206 (296)
T 3qij_A          206 V  206 (296)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A

Probab=94.34  E-value=0.07  Score=49.31  Aligned_cols=68  Identities=12%  Similarity=0.048  Sum_probs=51.6

Q ss_pred             CCChhhHHHHHHHhhccccCCCCCCC--CCCcCh-----hh--------HHHH-----HHHHhcCCCCHHHHHHHHHHHH
Q 014136          337 SIGSDVKMQLYGLHKIATVGPCREPQ--PMALKV-----SA--------RANW-----NAWKQLGNMTPEIAMEQYVTIL  396 (430)
Q Consensus       337 qpSdEdKLrLYGLYKQATvGDCNtpK--PS~fD~-----vG--------RAKW-----DAWKALKGMSKEEAMRKYIELV  396 (430)
                      ..+.++.++|=||--||..||++...  |+.++.     ..        ...|     .+|+++.|||+.+|+..|++++
T Consensus       133 ~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~  212 (314)
T 1h4r_A          133 YCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIA  212 (314)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            57899999999999999999998642  332211     10        1223     6899999999999999999999


Q ss_pred             HhhccCCcc
Q 014136          397 SRSIPGCIQ  405 (430)
Q Consensus       397 eELLP~W~s  405 (430)
                      .+ +|.|..
T Consensus       213 ~~-lp~yG~  220 (314)
T 1h4r_A          213 QD-LEMYGV  220 (314)
T ss_dssp             TT-STTTTC
T ss_pred             hc-cCccCc
Confidence            76 466653

>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A

Probab=93.72  E-value=0.14  Score=48.54  Aligned_cols=84  Identities=23%  Similarity=0.246  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCC--CCCcCh-----------h-hHHHHHHHHhc
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALKV-----------S-ARANWNAWKQL  380 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpK--PS~fD~-----------v-GRAKWDAWKAL  380 (430)
                      +.--|..+..-+-.    |. .+.+.++.+.|=||.-||..||++...  |+.+++           . .+.=..+|+++
T Consensus       183 ~~l~y~Q~~~dil~----G~-~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~  257 (371)
T 3ivf_A          183 LNLLYVQARDDILN----GS-HPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNC  257 (371)
T ss_dssp             HHHHHHHHHHHHHT----SS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHT
T ss_pred             HHHHHHHhhHHHhC----ce-eecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHc
Confidence            33345555555533    22 257889999999999999999998642  222110           1 22224589999


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCc
Q 014136          381 GNMTPEIAMEQYVTILSRSIPGCI  404 (430)
Q Consensus       381 KGMSKEEAMRKYIELVeELLP~W~  404 (430)
                      +|||+.+|+..|++++.++ |.|.
T Consensus       258 ~g~s~~eA~~~yL~~~~~l-~~yG  280 (371)
T 3ivf_A          258 GQMSEIEAKVRYVKLARSL-KTYG  280 (371)
T ss_dssp             TTCCHHHHHHHHHHHHHHS-TTTT
T ss_pred             cCCCHHHHHHHHHHHHhcc-cccC
Confidence            9999999999999999764 5554

>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A

Probab=91.74  E-value=0.26  Score=50.80  Aligned_cols=82  Identities=18%  Similarity=0.195  Sum_probs=58.0

Q ss_pred             HHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCC--CCCcC-----hhh--------HHHH-----HHH
Q 014136          318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALK-----VSA--------RANW-----NAW  377 (430)
Q Consensus       318 kFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpK--PS~fD-----~vG--------RAKW-----DAW  377 (430)
                      -|..+..-|-.    |. .+.+.++.+.|=||--||..||++...  |+.++     |..        ...|     ..|
T Consensus       102 lYlQvk~dIl~----G~-l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~h  176 (575)
T 2i1j_A          102 FYLQVKNAILS----DE-IYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWW  176 (575)
T ss_dssp             HHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC----CC-CCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHH
Confidence            44555544432    22 257889999999999999999998642  44321     110        2234     579


Q ss_pred             HhcCCCCHHHHHHHHHHHHHhhccCCcc
Q 014136          378 KQLGNMTPEIAMEQYVTILSRSIPGCIQ  405 (430)
Q Consensus       378 KALKGMSKEEAMRKYIELVeELLP~W~s  405 (430)
                      +++.|||+.+|+..|++++.+ +|.|..
T Consensus       177 k~l~G~s~~eA~~~yL~~a~~-lp~YG~  203 (575)
T 2i1j_A          177 QEHRGMLREDAMMEYLKIAQD-LEMYGV  203 (575)
T ss_dssp             GGGTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred             HHccCCCHHHHHHHHHHHHHh-ccccCC
Confidence            999999999999999999986 466664

>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A

Probab=90.95  E-value=0.77  Score=45.98  Aligned_cols=85  Identities=20%  Similarity=0.254  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCC--CCCcC------hhh----------------
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALK------VSA----------------  370 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpK--PS~fD------~vG----------------  370 (430)
                      +.--|..+..-+-.    |. .+.+.++.+.|-||.-|+..||++...  +..-+      +..                
T Consensus       321 ~~lly~Q~~~dil~----G~-~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l  395 (555)
T 3au4_A          321 FAFMFEQAHEAVIH----GH-HPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSV  395 (555)
T ss_dssp             HHHHHHHHHHHHHT----TC-SCCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSC
T ss_pred             HHhhHHHHHHHHHC----CC-CCCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhcccccccccccccc
Confidence            44456666666643    22 257799999999999999999988632  11100      000                


Q ss_pred             ----------HHH-------------HHHHHhcCCCCHHHHHHHHHHHHHhhccCCcc
Q 014136          371 ----------RAN-------------WNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQ  405 (430)
Q Consensus       371 ----------RAK-------------WDAWKALKGMSKEEAMRKYIELVeELLP~W~s  405 (430)
                                ...             ...|+++.||++.+|+..|++++.++ |.|..
T Consensus       396 ~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~  452 (555)
T 3au4_A          396 VRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYGS  452 (555)
T ss_dssp             CEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTTC
T ss_pred             ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcCc
Confidence                      112             25789999999999999999999876 66654

>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A

Probab=89.03  E-value=0.54  Score=45.16  Aligned_cols=84  Identities=15%  Similarity=0.169  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHH-hcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCC--------------------CCc----Ch-
Q 014136          315 LERLFGAAVAFV-GNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQP--------------------MAL----KV-  368 (430)
Q Consensus       315 LEEkFeaAVefV-rsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKP--------------------S~f----D~-  368 (430)
                      +.--|..+..-+ +..     +...+.++-++|-||--|+..||++...+                    ..+    .. 
T Consensus       114 ~~~~y~Q~r~Dil~g~-----~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~  188 (375)
T 2al6_A          114 LNFFYQQVKNDYMLEI-----ADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAK  188 (375)
T ss_dssp             HHHHHHHHHHHHHHHT-----TTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHH
T ss_pred             HHHHHHHHHHHHHcCC-----CccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChH
Confidence            444555554443 321     12468999999999999999999863211                    100    00 


Q ss_pred             -hhHHHHHHHHhcCCCCHHHHHHHHHHHHHhhccCCc
Q 014136          369 -SARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCI  404 (430)
Q Consensus       369 -vGRAKWDAWKALKGMSKEEAMRKYIELVeELLP~W~  404 (430)
                       ..+.=...|+++.||++++||.+|++++.+ +|.|.
T Consensus       189 ~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~-l~~yG  224 (375)
T 2al6_A          189 TLRKLIQQTFRQFANLNREESILKFFEILSP-VYRFD  224 (375)
T ss_dssp             HHHHHHHHHHHTTTTCCHHHHHHHHHHHHTT-TCCCS
T ss_pred             HHHHHHHHHHHHhhCCCHHHHHHHHHHHHhh-cccCC
Confidence             011113678899999999999999999988 46554

>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A

Probab=85.54  E-value=0.64  Score=43.46  Aligned_cols=82  Identities=13%  Similarity=0.028  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCC--CCCCcC---h---------------hhHHHHHH
Q 014136          317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK---V---------------SARANWNA  376 (430)
Q Consensus       317 EkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtp--KPS~fD---~---------------vGRAKWDA  376 (430)
                      --|..+..-|-.-    . .+.+.++.+.|=||--||..||.+..  .|+.++   +               -.+.=..+
T Consensus       116 l~y~Q~~~dil~G----~-~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~  190 (322)
T 4dxa_B          116 ILFDEARYNLLKG----F-YTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHE  190 (322)
T ss_dssp             HHHHHHHHHHHHT----C-CCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHCC----c-ccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHH
Confidence            3455555555332    1 24778999999999999999998642  233321   0               01223468


Q ss_pred             HHhc---CCCCHH--HHHHHHHHHHHhhccCCc
Q 014136          377 WKQL---GNMTPE--IAMEQYVTILSRSIPGCI  404 (430)
Q Consensus       377 WKAL---KGMSKE--EAMRKYIELVeELLP~W~  404 (430)
                      |+++   .||+++  +|+..|++++.++ |.|.
T Consensus       191 h~~~~~~~g~s~~~a~a~~~yL~~~~~l-p~yG  222 (322)
T 4dxa_B          191 YKNLSTSEGVSKEMHHLQRMFLQNCWEI-PTYG  222 (322)
T ss_dssp             HHHHHC--CCCCCHHHHHHHHHHHHHTS-TTTT
T ss_pred             HHhcccccCCChhHHHHHHHHHHHHhcC-CCcC
Confidence            9999   999975  4699999999854 6554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	430
d1hbka_	89	a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium	2e-23
d1hb6a_	86	a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos t	2e-18

>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]} Length = 89

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Plasmodium falciparum [TaxId: 5833]

 Score = 91.8 bits (228), Expect = 2e-23
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANW 374
           + ++F   V+F+        + +   ++K+ LY  +K +T+G C   +P A K   R  +
Sbjct: 2   MAQVFEECVSFINGLPRTINLPN---ELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKY 58

Query: 375 NAWKQLGNMTPEIAMEQYVTILSRSIPG 402
            AWK + N+  E A ++YV I+S   P 
Sbjct: 59  EAWKSVENLNREDAQKRYVDIVSEIFPY 86

>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]} Length = 86

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.6 bits (191), Expect = 2e-18
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 319 FGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWK 378
           F  A   V +       +    +  + +Y  +K ATVG     +P  L    +A W+AW 
Sbjct: 5   FDKAAEEVKHL-----KTKPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWN 59

Query: 379 QLGNMTPEIAMEQYVTILSRSIP 401
           +L   + E AM+ Y+  +     
Sbjct: 60  ELKGTSKEDAMKAYIDKVEELKK 82

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	430
d1hbka_	89	Acyl-CoA binding protein {Plasmodium falciparum [T	99.96
d1hb6a_	86	Acyl-CoA binding protein {Cow (Bos taurus) [TaxId:	99.95
d1gg3a1	106	Erythroid membrane protein 4.1R {Human (Homo sapie	97.34
d1h4ra1	111	Merlin {Human (Homo sapiens) [TaxId: 9606]}	97.31
d1mixa1	114	Talin {Chicken (Gallus gallus) [TaxId: 9031]}	97.24
d1ef1a1	111	Moesin {Human (Homo sapiens) [TaxId: 9606]}	97.16
d2al6a1	123	Focal adhesion kinase 1 {Chicken (Gallus gallus) [	95.05

>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Plasmodium falciparum [TaxId: 5833]

Probab=99.96  E-value=1.3e-30  Score=210.87  Aligned_cols=88  Identities=28%  Similarity=0.510  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014136          315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT  394 (430)
Q Consensus       315 LEEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIE  394 (430)
                      |++.|+.|+.+|+++|+..   .+|++++|+|||||||||+|||+.++|++|++++|+||+||++++|||+++||+.||+
T Consensus         2 L~~~F~~A~~~v~~~~~~~---~~~~~~~L~lY~lyKQat~G~~~~~~P~~~~~~~~~Kw~AW~~l~gms~~eA~~~Yi~   78 (89)
T d1hbka_           2 MAQVFEECVSFINGLPRTI---NLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVD   78 (89)
T ss_dssp             HHHHHHHHHHHHHHSCTTC---CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCC---CCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            7889999999999998643   5899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCcc
Q 014136          395 ILSRSIPGCIQ  405 (430)
Q Consensus       395 LVeELLP~W~s  405 (430)
                      ++++++|+|.+
T Consensus        79 ~v~~l~p~w~~   89 (89)
T d1hbka_          79 IVSEIFPYWQD   89 (89)
T ss_dssp             HHHHHCTTTTC
T ss_pred             HHHHHcccccC
Confidence            99999999974

>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=4e-29  Score=200.52  Aligned_cols=84  Identities=24%  Similarity=0.338  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCCCCCCcChhhHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014136          316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTI  395 (430)
Q Consensus       316 EEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtpKPS~fD~vGRAKWDAWKALKGMSKEEAMRKYIEL  395 (430)
                      +..|+.|+..|++++.     +|+++++|+|||||||||+|||+.++|++||+.+|+||+||++++|||+++||+.||++
T Consensus         2 ~~~F~~A~~~v~~~~~-----~~~~~~~L~LYalyKQat~Gd~~~~~P~~~~~~~~aKw~AW~~~~gms~~eA~~~YI~~   76 (86)
T d1hb6a_           2 QAEFDKAAEEVKHLKT-----KPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNELKGTSKEDAMKAYIDK   76 (86)
T ss_dssp             HHHHHHHHHHGGGCSS-----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-----CcCHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            4689999999999975     58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCc
Q 014136          396 LSRSIPGCI  404 (430)
Q Consensus       396 VeELLP~W~  404 (430)
                      +++++|.|.
T Consensus        77 v~~l~~k~g   85 (86)
T d1hb6a_          77 VEELKKKYG   85 (86)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999884

>d1gg3a1 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Erythroid membrane protein 4.1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00022  Score=55.70  Aligned_cols=62  Identities=11%  Similarity=0.028  Sum_probs=49.1

Q ss_pred             CCChhhHHHHHHHhhccccCCCCCCC--CCCc-----------ChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 014136          337 SIGSDVKMQLYGLHKIATVGPCREPQ--PMAL-----------KVSARANWNAWKQLGNMTPEIAMEQYVTILSRS  399 (430)
Q Consensus       337 qpSdEdKLrLYGLYKQATvGDCNtpK--PS~f-----------D~vGRAKWDAWKALKGMSKEEAMRKYIELVeEL  399 (430)
                      +.+.++-..|.||--||-.||++...  ++.+           ++ ...=-..|++++|||+.+|+..|++++.++
T Consensus        29 ~~~~~~a~~Laal~~Qae~GD~~~~~~~~~yl~~~~~~p~~~~~~-~~~I~~~h~~l~G~s~~~A~~~fL~~~~~l  103 (106)
T d1gg3a1          29 PCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKEL-EEKVMELHKSYRSMTPAQADLEFLENAKKL  103 (106)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCSCCTTSCSSCCGGGSCCCSSCCHHH-HHHHHHHHHHCCSCCHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCccccchhhhhHHhcCCccHHHH-HHHHHHHHHHccCcCHHHHHHHHHHHHhcC
Confidence            58899999999999999999998642  2221           12 222235899999999999999999999876

>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Merlin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00013  Score=57.26  Aligned_cols=63  Identities=13%  Similarity=0.078  Sum_probs=48.5

Q ss_pred             CCChhhHHHHHHHhhccccCCCCCCC--CCCcC-----h--------hhHHHH-----HHHHhcCCCCHHHHHHHHHHHH
Q 014136          337 SIGSDVKMQLYGLHKIATVGPCREPQ--PMALK-----V--------SARANW-----NAWKQLGNMTPEIAMEQYVTIL  396 (430)
Q Consensus       337 qpSdEdKLrLYGLYKQATvGDCNtpK--PS~fD-----~--------vGRAKW-----DAWKALKGMSKEEAMRKYIELV  396 (430)
                      +.+.++-..|.||.-||.+||++...  |+.++     |        .....|     ..|+.++|||+.+|+..|++++
T Consensus        29 ~~~~~~a~~LAal~~Qae~GD~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~I~~~hk~l~G~s~~~A~~~yL~~~  108 (111)
T d1h4ra1          29 YCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIA  108 (111)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCChhhcccchhhhhhcCCchHHHHhhccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            58899999999999999999997642  32211     1        111233     4799999999999999999999


Q ss_pred             Hhh
Q 014136          397 SRS  399 (430)
Q Consensus       397 eEL  399 (430)
                      .+|
T Consensus       109 ~~L  111 (111)
T d1h4ra1         109 QDL  111 (111)
T ss_dssp             TTS
T ss_pred             hhC
Confidence            764

>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Talin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.24  E-value=0.00034  Score=54.59  Aligned_cols=78  Identities=24%  Similarity=0.259  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHHhhccccCCCCCC--CCCCcC-------------hhhHHHHHHHHhc
Q 014136          316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK-------------VSARANWNAWKQL  380 (430)
Q Consensus       316 EEkFeaAVefVrsLPkdG~isqpSdEdKLrLYGLYKQATvGDCNtp--KPS~fD-------------~vGRAKWDAWKAL  380 (430)
                      .--|..+-.-|-.    |. .+.+.++.+.|-||.-||..||++..  .|..+.             +.. .=-+.|+++
T Consensus        19 ~l~y~Q~k~dil~----G~-~~~~~~~a~~Laal~~Q~e~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~-~i~~~h~~l   92 (114)
T d1mixa1          19 NLLYVQARDDILN----GS-HPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGER-KIFMAHKNC   92 (114)
T ss_dssp             HHHHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHH-HHHHHHHHT
T ss_pred             HHHHHHHHHHHHC----CC-CCCCHHHHHHHHHHHHHHHhCCCCccccccchhhhcccCChhhchHHHHH-HHHHHHHHc
Confidence            3344455544432    22 25789999999999999999999864  232221             122 223689999


Q ss_pred             CCCCHHHHHHHHHHHHHhh
Q 014136          381 GNMTPEIAMEQYVTILSRS  399 (430)
Q Consensus       381 KGMSKEEAMRKYIELVeEL  399 (430)
                      +|||+.+|+..|++++.++
T Consensus        93 ~g~s~~~A~~~yL~~~~~l  111 (114)
T d1mixa1          93 GNMSEIEAKVRYVKLARSL  111 (114)
T ss_dssp             TTCCHHHHHHHHHHHHHHS
T ss_pred             cCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999875

>d1ef1a1 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Moesin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00043  Score=54.26  Aligned_cols=63  Identities=13%  Similarity=0.021  Sum_probs=48.7

Q ss_pred             CCChhhHHHHHHHhhccccCCCCCC--CCCCcC-----hh-------------hHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014136          337 SIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----VS-------------ARANWNAWKQLGNMTPEIAMEQYVTIL  396 (430)
Q Consensus       337 qpSdEdKLrLYGLYKQATvGDCNtp--KPS~fD-----~v-------------GRAKWDAWKALKGMSKEEAMRKYIELV  396 (430)
                      +.+.++...|.||--||..||++..  .|+.+.     |.             .+.=.+.|+.++|||+.+|+..|++++
T Consensus        29 ~~~~~~a~~Laal~~Qae~GD~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~h~~l~g~s~~~A~~~fL~~~  108 (111)
T d1ef1a1          29 YCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKIA  108 (111)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCcccccHHHHHHHhcCchHHHhcccccHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence            5889999999999999999999764  233221     11             111236899999999999999999998


Q ss_pred             Hhh
Q 014136          397 SRS  399 (430)
Q Consensus       397 eEL  399 (430)
                      .+|
T Consensus       109 ~~L  111 (111)
T d1ef1a1         109 QDL  111 (111)
T ss_dssp             TTS
T ss_pred             hcC
Confidence            764

>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Focal adhesion kinase 1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.05  E-value=0.017  Score=45.50  Aligned_cols=63  Identities=16%  Similarity=0.247  Sum_probs=47.0

Q ss_pred             CCChhhHHHHHHHhhccccCCCCCCCCC----------CcC--------------hh--hHHHHHHHHhcCCCCHHHHHH
Q 014136          337 SIGSDVKMQLYGLHKIATVGPCREPQPM----------ALK--------------VS--ARANWNAWKQLGNMTPEIAME  390 (430)
Q Consensus       337 qpSdEdKLrLYGLYKQATvGDCNtpKPS----------~fD--------------~v--GRAKWDAWKALKGMSKEEAMR  390 (430)
                      .++.+.-+.|=||--|+-.||++...+.          .++              ..  .+.=-..|++++|||+.||+-
T Consensus        32 ~~~~e~Ai~Laal~~Q~~~gd~~~~~~~~~~~~~~~~~~~~L~~flP~~~l~~~~~~~~~k~I~~~~k~~~gls~~eA~~  111 (123)
T d2al6a1          32 QVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL  111 (123)
T ss_dssp             TSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhccchhhcccccccchhhhhhhHHhcCChHHHhhcccHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            4678888999999999999999875321          011              11  111125899999999999999


Q ss_pred             HHHHHHHhh
Q 014136          391 QYVTILSRS  399 (430)
Q Consensus       391 KYIELVeEL  399 (430)
                      +|++++.++
T Consensus       112 ~fL~~~~~l  120 (123)
T d2al6a1         112 KFFEILSPV  120 (123)
T ss_dssp             HHHHHHTTT
T ss_pred             HHHHHHHhc
Confidence            999999875