BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014140
(430 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 147/279 (52%), Gaps = 17/279 (6%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+VYK L + G ++ +K++ + G EL Q ++E+ HRN
Sbjct: 52 GKVYKGRL--ADGTLVAVKRLKEERXQGGEL-------------QFQTEVEMISMAVHRN 96
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
++ L + LLVY + NGS+ L + + + LDW R RIA G A GL YLH
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH 327
P+IIHRD++ AN+L+D++ EA + +FGLAK + D ++ GT+G+IAPE
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXXAVRGTIGHIAPEYL 215
Query: 328 QTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHTKEMSLVQWMRNVMTSENPNRAINS 386
T S+ D++ +GV+L L+ G+ D + ++ L+ W++ ++ + ++
Sbjct: 216 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 275
Query: 387 KLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCML 425
L GN +E++ ++++A CT P +RP +V ML
Sbjct: 276 DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 146/279 (52%), Gaps = 17/279 (6%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+VYK L + G ++ +K++ + G EL Q ++E+ HRN
Sbjct: 44 GKVYKGRL--ADGXLVAVKRLKEERTQGGEL-------------QFQTEVEMISMAVHRN 88
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
++ L + LLVY + NGS+ L + + + LDW R RIA G A GL YLH
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH 327
P+IIHRD++ AN+L+D++ EA + +FGLAK + D ++ G +G+IAPE
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXXAVRGXIGHIAPEYL 207
Query: 328 QTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHTKEMSLVQWMRNVMTSENPNRAINS 386
T S+ D++ +GV+L L+ G+ D + ++ L+ W++ ++ + ++
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267
Query: 387 KLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCML 425
L GN +E++ ++++A CT P +RP +V ML
Sbjct: 268 DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 138/282 (48%), Gaps = 23/282 (8%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VYK + ++ + +KK+ + E +K+ Q EI + +H N
Sbjct: 45 GVVYKGYVNNTT---VAVKKLAAMVDITTEELKQ----------QFDQEIKVMAKCQHEN 91
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+V LL D LVY + NGSL D L G L W R +IAQG A+G+ +LH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAGTVGYIAPEC 326
+H IHRDI+ AN+L+D+ A+IS+FGLA R + +T S + GT Y+APE
Sbjct: 151 ENHH---IHRDIKSANILLDEAFTAKISDFGLA-RASEKFAQTVMXSRIVGTTAYMAPEA 206
Query: 327 HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINS 386
+ ++ DIYSFGV+L ++ G P+ D +H + L+ + E
Sbjct: 207 LRG-EITPKSDIYSFGVVLLEIITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYID 262
Query: 387 KLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
K + + + + +A C + NKRP+ K V+ +L ++
Sbjct: 263 KKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 21/281 (7%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VYK + ++ + +KK+ + E +K+ Q EI + +H N
Sbjct: 45 GVVYKGYVNNTT---VAVKKLAAMVDITTEELKQ----------QFDQEIKVMAKCQHEN 91
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+V LL D LVY + NGSL D L G L W R +IAQG A+G+ +LH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH 327
+H IHRDI+ AN+L+D+ A+IS+FGLA+ + GT Y+APE
Sbjct: 151 ENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 328 QTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSK 387
+ ++ DIYSFGV+L ++ G P+ D +H + L+ + E K
Sbjct: 208 RG-EITPKSDIYSFGVVLLEIITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDK 263
Query: 388 LLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
+ + + + +A C + NKRP+ K V+ +L ++
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 135/281 (48%), Gaps = 21/281 (7%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VYK + ++ + +KK+ A ++ +E L Q EI + +H N
Sbjct: 39 GVVYKGYVNNTT---VAVKKL-------AAMVDITTEELKQ---QFDQEIKVMAKCQHEN 85
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+V LL D LVY + NGSL D L G L W R +IAQG A+G+ +LH
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH 327
+H IHRDI+ AN+L+D+ A+IS+FGLA+ + GT Y+APE
Sbjct: 145 ENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 328 QTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSK 387
+ ++ DIYSFGV+L ++ G P+ D +H + L+ + E K
Sbjct: 202 RG-EITPKSDIYSFGVVLLEIITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDK 257
Query: 388 LLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
+ + + + +A C + NKRP+ K V+ +L ++
Sbjct: 258 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 132/280 (47%), Gaps = 21/280 (7%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VYK + ++ + +KK+ A ++ +E L + Q EI + +H N
Sbjct: 36 GVVYKGYVNNTT---VAVKKL-------AAMVDITTEELKQQFDQ---EIKVXAKCQHEN 82
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+V LL D LVY + NGSL D L G L W R +IAQG A+G+ +LH
Sbjct: 83 LVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH 327
+H IHRDI+ AN+L+D+ A+IS+FGLA+ + GT Y APE
Sbjct: 142 ENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 328 QTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSK 387
+ ++ DIYSFGV+L ++ G P+ D +H + L+ + E K
Sbjct: 199 RG-EITPKSDIYSFGVVLLEIITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDK 254
Query: 388 LLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQ 427
+ + +A C + NKRP+ K V+ +L +
Sbjct: 255 KXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
RH ++V L+ R+ +L+Y++ NG+L+ LY + W R I G A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
YLH IIHRD++ N+L+D++ +I++FG++K+ + + GT+GYI
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 324 PECHQTVALSDTCDIYSFGVLL 345
PE L++ D+YSFGV+L
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVL 231
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
RH ++V L+ R+ +L+Y++ NG+L+ LY + W R I G A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
YLH IIHRD++ N+L+D++ +I++FG++K+ + + GT+GYI
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 324 PECHQTVALSDTCDIYSFGVLL 345
PE L++ D+YSFGV+L
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVL 231
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 163 ITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDL 222
+ IK I P + E +K+ +H+ + Q+ H+NIV ++ DC
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHN-----------SSQLSHQNIVSMIDVDEEDDCYY 87
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ +L + Y S G +D I G+++ +H RI+HRDI+P
Sbjct: 88 LVMEYIEGPTLSE--YIESHGPLSVDTAIN--FTNQILDGIKH---AHDMRIVHRDIKPQ 140
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFG 342
N+LID + +I +FG+AK + + + T T + GTV Y +PE + A + DIYS G
Sbjct: 141 NILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199
Query: 343 VLLAVLVIGKFP 354
++L +++G+ P
Sbjct: 200 IVLYEMLVGEPP 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 111/234 (47%), Gaps = 33/234 (14%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+I+ EI RH +I+ L + +V E+ G L D Y GR E + A
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD--YICKHGRVE-EMEA 113
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R R+ Q I S ++Y HR ++HRD++P NVL+D M A+I++FGL+ + DG T
Sbjct: 114 R-RLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 169
Query: 312 TWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ G+ Y APE + DI+S GV+L L+ G P DD +H +L +
Sbjct: 170 S---CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD--EHVP--TLFKK 222
Query: 371 MRN--VMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVR 422
+R E NR++ + L+ ML V DP KR KD+R
Sbjct: 223 IRGGVFYIPEYLNRSVATLLM------HMLQV----------DPLKRATIKDIR 260
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+IR EI RH +I+ L + +V E+ G L D Y GR LD
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFD--YICKNGR--LDEKE 117
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R+ Q I SG++Y HR ++HRD++P NVL+D M A+I++FGL+ + DG
Sbjct: 118 SRRLFQQILSGVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRX 174
Query: 312 TWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+ G+ Y APE + DI+S GV+L L+ G P DD
Sbjct: 175 S---CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Query: 140 EKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIIT 199
EKI + G V++AE GS V KI+ AE + + E+
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAV----KILMEQDFHAERVN-----------EFLREVAI 87
Query: 200 AGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGI 259
++RH NIV + + + +V E+ GSL +L+ S R +LD R +A +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDV 146
Query: 260 ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTV 319
A G+ YLH + P I+HR+++ N+L+D ++ +FGL++ T ++ S AGT
Sbjct: 147 AKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTP 203
Query: 320 GYIAPECHQTVALSDTCDIYSFGVLL 345
++APE + ++ D+YSFGV+L
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVIL 229
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 33/234 (14%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+I+ EI RH +I+ L + +V E+ G L D Y GR E + A
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD--YICKHGRVE-EMEA 113
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R R+ Q I S ++Y HR ++HRD++P NVL+D M A+I++FGL+ + DG
Sbjct: 114 R-RLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD 169
Query: 312 TWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ G+ Y APE + DI+S GV+L L+ G P DD +H +L +
Sbjct: 170 S---CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD--EHVP--TLFKK 222
Query: 371 MRN--VMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVR 422
+R E NR++ + L+ ML V DP KR KD+R
Sbjct: 223 IRGGVFYIPEYLNRSVATLLM------HMLQV----------DPLKRATIKDIR 260
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 31/282 (10%)
Query: 154 ELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLA 213
E+ GS + P K + + + E M ++ EI Q H NIV
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 214 RMVRRDCDLLVYEFRRNGSLQDIL-YDVSQGRRELDWLARHRIA---QGIASGLEYLHMS 269
V +D LV + GS+ DI+ + V++G + L IA + + GLEYLH +
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 270 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTT---WSLAGTVGYIAPEC 326
+ IHRD++ N+L+ +D +I++FG++ + G T + GT ++APE
Sbjct: 141 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197
Query: 327 HQTVALSD-TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAIN 385
+ V D DI+SFG+ L G P + M ++ ++T +N +
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAP----YHKYPPMKVL-----MLTLQN-----D 243
Query: 386 SKLLGNGYEEQMLL------VLKIACFCTLDDPNKRPNSKDV 421
L G +++ +L K+ C DP KRP + ++
Sbjct: 244 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 31/282 (10%)
Query: 154 ELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLA 213
E+ GS + P K + + + E M ++ EI Q H NIV
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 214 RMVRRDCDLLVYEFRRNGSLQDIL-YDVSQGRRELDWLARHRIA---QGIASGLEYLHMS 269
V +D LV + GS+ DI+ + V++G + L IA + + GLEYLH +
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 270 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTT---WSLAGTVGYIAPEC 326
+ IHRD++ N+L+ +D +I++FG++ + G T + GT ++APE
Sbjct: 136 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 327 HQTVALSD-TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAIN 385
+ V D DI+SFG+ L G P + M ++ ++T +N +
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAAP----YHKYPPMKVL-----MLTLQN-----D 238
Query: 386 SKLLGNGYEEQMLL------VLKIACFCTLDDPNKRPNSKDV 421
L G +++ +L K+ C DP KRP + ++
Sbjct: 239 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 140 EKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIIT 199
EKI + G V++AE GS V KI+ AE + + E+
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAV----KILMEQDFHAERVN-----------EFLREVAI 87
Query: 200 AGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGI 259
++RH NIV + + + +V E+ GSL +L+ S R +LD R +A +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDV 146
Query: 260 ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTV 319
A G+ YLH + P I+HRD++ N+L+D ++ +FGL++ + AGT
Sbjct: 147 AKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX--AAGTP 203
Query: 320 GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
++APE + ++ D+YSFGV+L L + P
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 25/235 (10%)
Query: 124 EEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDS 183
+ED + E+ F LEK+ G VYKA + +G+++ IK++
Sbjct: 19 DEDSLTKQPEEVFDVLEKLGEGSYGSVYKA-IHKETGQIVAIKQV--------------- 62
Query: 184 EPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQG 243
P+ + +I EI Q ++V + +V E+ GS+ DI+ ++
Sbjct: 63 -PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT 121
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
E D +A I Q GLEYLH R IHRDI+ N+L++ + A++++FG+A ++
Sbjct: 122 LTE-DEIAT--ILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
Query: 304 PDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF 358
D + + GT ++APE Q + + DI+S G+ + GK P D
Sbjct: 176 TDXMAKRN--XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 12/170 (7%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
+++ EI +RH +I+ L + ++V E+ G L D Y V + R D
Sbjct: 54 MRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFD--YIVEKKRMTED-- 108
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
R Q I +EY HR +I+HRD++P N+L+DD++ +I++FGL+ + DG+
Sbjct: 109 EGRRFFQQIICAIEY---CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK 165
Query: 311 TTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFF 359
T+ G+ Y APE + + D++S G++L V+++G+ P DD F
Sbjct: 166 TS---CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 184 EPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQG 243
E + + +R E ++H NI+ L ++ LV EF R G L +L S
Sbjct: 44 EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGK 100
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDME--------ARIS 295
R D L + IA G+ YLH IIHRD++ +N+LI +E +I+
Sbjct: 101 RIPPDILVNWAVQ--IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158
Query: 296 EFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+FGLA+ RTT S AG ++APE + S D++S+GVLL L+ G+ P
Sbjct: 159 DFGLARE----WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHR 206
N ++ K GS G+V K ++I K +I EI +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
+I+ L + +D ++V E+ N L+D R ++ R Q I S +EY
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEY- 128
Query: 267 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC 326
HR +I+HRD++P N+L+D+ + +I++FGL+ + DG+ T+ G+ Y APE
Sbjct: 129 --CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEV 183
Query: 327 -HQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+ D++S GV+L V++ + P DD
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHR 206
N ++ K GS G+V K ++I K +I EI +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
+I+ L + +D ++V E+ N L+D R ++ R Q I S +EY
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEY- 127
Query: 267 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC 326
HR +I+HRD++P N+L+D+ + +I++FGL+ + DG+ T+ G+ Y APE
Sbjct: 128 --CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEV 182
Query: 327 -HQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+ D++S GV+L V++ + P DD
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHR 206
N ++ K GS G+V K ++I K +I EI +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
+I+ L + +D ++V E+ N L+D R ++ R Q I S +EY
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEY- 118
Query: 267 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC 326
HR +I+HRD++P N+L+D+ + +I++FGL+ + DG+ T+ G+ Y APE
Sbjct: 119 --CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEV 173
Query: 327 -HQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+ D++S GV+L V++ + P DD
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 30/209 (14%)
Query: 167 KIIQPLKSGA----ELIKKDSEPLHHKMIQIRSEIIT-AGQVRHRN-------IV--PLL 212
+I++ L +G+ LI+ ++ M ++ EI+ QV H N IV P +
Sbjct: 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI 68
Query: 213 ARMVRRDCD----LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHM 268
RM D ++ ++ G L +L + +R + +A+ A+ + LEYLH
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPNPVAKFYAAE-VCLALEYLHS 124
Query: 269 SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
II+RD++P N+L+D + +I++FG AK +PD T+ L GT YIAPE
Sbjct: 125 KD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVS 176
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
T + + D +SFG+L+ ++ G P D
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHR 206
N ++ K GS G+V K ++I K +I EI +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
+I+ L + +D ++V E+ N L+D R ++ R Q I S +EY
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEY- 122
Query: 267 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC 326
HR +I+HRD++P N+L+D+ + +I++FGL+ + DG+ T+ G+ Y APE
Sbjct: 123 --CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEV 177
Query: 327 -HQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+ D++S GV+L V++ + P DD
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 190 MIQ-IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELD 248
M+Q +++E+ Q++H +I+ L + LV E NG + L + + E +
Sbjct: 54 MVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE 113
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
ARH + Q I +G+ YLH SH I+HRD+ +N+L+ +M +I++FGLA ++ H
Sbjct: 114 --ARHFMHQ-IITGMLYLH-SHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD 356
+ ++L GT YI+PE A D++S G + L+IG+ P D
Sbjct: 168 K--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVYK L SSG+ + I+ LK+G + + E GQ H N
Sbjct: 58 GEVYKGMLKTSSGKK-EVPVAIKTLKAGYT---------EKQRVDFLGEAGIMGQFSHHN 107
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL- 266
I+ L + + +++ E+ NG+L L + E L + +GIA+G++YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 267 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAG-TVGYIAPE 325
+M++ +HRD+ N+L++ ++ ++S+FGL++ + D T T S + + APE
Sbjct: 165 NMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 326 CHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQH 361
+ D++SFG+++ V+ G+ P + H
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 257
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ-GRRELDWLARHRIAQGIA 260
+V R +V L +D LV G L+ +Y + Q G E + A I
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF---YAAEIC 296
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
GLE LH R RI++RD++P N+L+DD RIS+ GLA +P+G T GTVG
Sbjct: 297 CGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVG 350
Query: 321 YIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKE 364
Y+APE + + + D ++ G LL ++ G+ P FQ K+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP----FQQRKK 390
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 188 HKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRREL 247
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 63 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 118
Query: 248 -DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-D 305
+ AR+ + Q I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++ D
Sbjct: 119 TEPEARYYLRQ-IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 174
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD--------- 356
G + T L GT YIAPE S D++S G ++ L++GK P +
Sbjct: 175 GERKKT---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 231
Query: 357 -------DFFQHTKEM--SLVQWMRNVMTSENP--NRAINSKLLGNGYEEQMLLVLKIAC 405
+H + SL+Q M + P N +N + +GY + L I C
Sbjct: 232 RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY---IPARLPITC 288
Query: 406 FC----------TLDDPNKRP 416
+LD N++P
Sbjct: 289 LTIPPRFSIAPSSLDPSNRKP 309
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ-GRRELDWLARHRIAQGIA 260
+V R +V L +D LV G L+ +Y + Q G E + A I
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF---YAAEIC 296
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
GLE LH R RI++RD++P N+L+DD RIS+ GLA +P+G T GTVG
Sbjct: 297 CGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVG 350
Query: 321 YIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKE 364
Y+APE + + + D ++ G LL ++ G+ P FQ K+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP----FQQRKK 390
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 188 HKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRREL 247
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 59 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 114
Query: 248 -DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-D 305
+ AR+ + Q I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++ D
Sbjct: 115 TEPEARYYLRQ-IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD--------- 356
G + T L GT YIAPE S D++S G ++ L++GK P +
Sbjct: 171 GERKKT---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
Query: 357 -------DFFQHTKEM--SLVQWMRNVMTSENP--NRAINSKLLGNGYEEQMLLVLKIAC 405
+H + SL+Q M + P N +N + +GY + L I C
Sbjct: 228 RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY---IPARLPITC 284
Query: 406 FC----------TLDDPNKRP 416
+LD N++P
Sbjct: 285 LTIPPRFSIAPSSLDPSNRKP 305
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 188 HKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRREL 247
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 59 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 114
Query: 248 -DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-D 305
+ AR+ + Q I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++ D
Sbjct: 115 TEPEARYYLRQ-IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD--------- 356
G + T L GT YIAPE S D++S G ++ L++GK P +
Sbjct: 171 GERKKT---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
Query: 357 -------DFFQHTKEM--SLVQWMRNVMTSENP--NRAINSKLLGNGYEEQMLLVLKIAC 405
+H + SL+Q M + P N +N + +GY + L I C
Sbjct: 228 RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY---IPARLPITC 284
Query: 406 FC----------TLDDPNKRP 416
+LD N++P
Sbjct: 285 LTIPPXFSIAPSSLDPSNRKP 305
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 54/318 (16%)
Query: 125 EDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSE 184
E+L F + + LEK+ G VYKA+ S GR++ +K+I + D+E
Sbjct: 12 ENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRI-----------RLDAE 58
Query: 185 PLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR 244
IR EI ++ H NIV L+ + C LV+EF L+ +L + G
Sbjct: 59 DEGIPSTAIR-EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGL 116
Query: 245 RELDW-LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR- 302
++ + +++ +G+A H+ RI+HRD++P N+LI+ D ++++FGLA+
Sbjct: 117 QDSQIKIYLYQLLRGVAH-------CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF 169
Query: 303 -IPDGHTRTTTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FP--SD 356
IP R+ T + T+ Y AP+ + S + DI+S G + A ++ GK FP +D
Sbjct: 170 GIP---VRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
Query: 357 D-----FFQ-----HTKEMSLVQ----WMRNVMTSENPNRAINSKLLGNGYEEQMLLVLK 402
D F + +E VQ W + T + + S ++ +E + L+
Sbjct: 226 DDQLPKIFSILGTPNPREWPQVQELPLWKQR--TFQVFEKKPWSSIIPGFCQEGIDLLSN 283
Query: 403 IACFCTLDDPNKRPNSKD 420
+ CF DPNKR +++D
Sbjct: 284 MLCF----DPNKRISARD 297
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 54/318 (16%)
Query: 125 EDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSE 184
E+L F + + LEK+ G VYKA+ S GR++ +K+I + D+E
Sbjct: 12 ENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRI-----------RLDAE 58
Query: 185 PLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR 244
IR EI ++ H NIV L+ + C LV+EF L+ +L + G
Sbjct: 59 DEGIPSTAIR-EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGL 116
Query: 245 RELDW-LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR- 302
++ + +++ +G+A H+ RI+HRD++P N+LI+ D ++++FGLA+
Sbjct: 117 QDSQIKIYLYQLLRGVAH-------CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF 169
Query: 303 -IPDGHTRTTTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FP--SD 356
IP R+ T + T+ Y AP+ + S + DI+S G + A ++ GK FP +D
Sbjct: 170 GIP---VRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
Query: 357 D-----FFQ-----HTKEMSLVQ----WMRNVMTSENPNRAINSKLLGNGYEEQMLLVLK 402
D F + +E VQ W + T + + S ++ +E + L+
Sbjct: 226 DDQLPKIFSILGTPNPREWPQVQELPLWKQR--TFQVFEKKPWSSIIPGFCQEGIDLLSN 283
Query: 403 IACFCTLDDPNKRPNSKD 420
+ CF DPNKR +++D
Sbjct: 284 MLCF----DPNKRISARD 297
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 133 EDYFASLEKIRSCWNGEVYKA-ELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMI 191
E YF + K+ S GEV E G S + I + K Q K K+ E H
Sbjct: 36 ESYF-KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE--- 91
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+I +EI + H NI+ L + LV EF G L ++ R + D
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIINRHKFDECD 147
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD---MEARISEFGLAKRIPDGHT 308
I + I SG+ YLH + I+HRDI+P N+L+++ + +I +FGL+ +
Sbjct: 148 AANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
GT YIAPE + ++ CD++S GV++ +L+ G P
Sbjct: 205 LRDR---LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G + L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-------FD 111
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 169
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 170 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTR 309
AR+ + Q I G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I DG +
Sbjct: 144 ARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
T L GT YIAPE S DI+S G +L L++GK P
Sbjct: 200 KT---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + L+ E+ G + D Y V+ GR + + AR + Q I S
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMK-EKEARSKFRQ-IVSA 123
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H+ RI+HRD++ N+L+D DM +I++FG + G T G+ Y
Sbjct: 124 VQY---CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYA 177
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 219
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 107
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPS--SRRT 165
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L+GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 166 T--LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 224 FTFPDFVTEGARDLISRLLKHNPSQRPML 252
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 123
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 124 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 181
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 182 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 239
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 240 FTFPDFVTEGARDLISRLLKHNPSQRPML 268
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 46/261 (17%)
Query: 188 HKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRREL 247
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 81 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 136
Query: 248 -DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-D 305
+ AR+ + Q I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++ D
Sbjct: 137 TEPEARYYLRQ-IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 192
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD--------- 356
G + L GT YIAPE S D++S G ++ L++GK P +
Sbjct: 193 GERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 249
Query: 357 -------DFFQHTKEM--SLVQWMRNVMTSENP--NRAINSKLLGNGYEEQMLLVLKIAC 405
+H + SL+Q M + P N +N + +GY + L I C
Sbjct: 250 RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY---IPARLPITC 306
Query: 406 FC----------TLDDPNKRP 416
+LD N++P
Sbjct: 307 LTIPPRFSIAPSSLDPSNRKP 327
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 168 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 168 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 164
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 165 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ GSL+D L S G +L A Q I G+ YLH H IHRD+
Sbjct: 112 LVMEYVPLGSLRDYLPRHSIGLAQLLLFA-----QQICEGMAYLHAQH---YIHRDLAAR 163
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT-VGYIAPECHQTVALSDTCDIYSF 341
NVL+D+D +I +FGLAK +P+GH + V + APEC + D++SF
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223
Query: 342 GVLLAVLV 349
GV L L+
Sbjct: 224 GVTLYELL 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 111
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 169
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 170 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 132
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 190
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 191 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 249 FTFPDFVTEGARDLISRLLKHNPSQRPML 277
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 106 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 163
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 164 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 221
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 222 FTFPDFVTEGARDLISRLLKHNPSQRPML 250
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 110
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 168
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 169 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 226
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 227 FTFPDFVTEGARDLISRLLKHNPSQRPML 255
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 46/261 (17%)
Query: 188 HKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRREL 247
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 83 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 138
Query: 248 -DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-D 305
+ AR+ + Q I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++ D
Sbjct: 139 TEPEARYYLRQ-IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD--------- 356
G + L GT YIAPE S D++S G ++ L++GK P +
Sbjct: 195 GERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251
Query: 357 -------DFFQHTKEM--SLVQWMRNVMTSENP--NRAINSKLLGNGYEEQMLLVLKIAC 405
+H + SL+Q M + P N +N + +GY + L I C
Sbjct: 252 RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY---IPARLPITC 308
Query: 406 FC----------TLDDPNKRP 416
+LD N++P
Sbjct: 309 LTIPPRFSIAPSSLDPSNRKP 329
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + LV E+ G + D L V+ GR + + AR + Q I S
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKFRQ-IVSA 126
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H + I+HRD++ N+L+D DM +I++FG + G+ T G+ Y
Sbjct: 127 VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYA 180
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLL----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRE 246
++ R E A + H IV + A +V E+ +L+DI++ ++G
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEG--- 111
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD- 305
+ R + IA + L+ SH+ IIHRD++PAN++I ++ +FG+A+ I D
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP----SDD--FF 359
G++ T T ++ GT Y++PE + ++ D+YS G +L ++ G+ P S D +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAY 229
Query: 360 QHTKEMSLVQWMRN 373
QH +E + R+
Sbjct: 230 QHVREDPIPPSARH 243
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 103
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 161
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 162 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 219
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 220 FTFPDFVTEGARDLISRLLKHNPSQRPML 248
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 188 HKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRREL 247
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 57 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKAL 112
Query: 248 -DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-D 305
+ AR+ + Q I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++ D
Sbjct: 113 TEPEARYYLRQ-IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
G + L GT YIAPE S D++S G ++ L++GK P
Sbjct: 169 GERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I+ FG + P +R T
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS--SRRT 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 168 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 108
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I+ FG + P +R T
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS--SRRT 166
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 167 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 225 FTFPDFVTEGARDLISRLLKHNPSQRPML 253
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + LV E+ G + D L V+ GR + + AR + Q I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKFRQ-IVSA 125
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H I+HRD++ N+L+D DM +I++FG + G+ T G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 182 DSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVS 241
D L + +I++EI +RH++I L + + +V E+ G L D Y +S
Sbjct: 44 DKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD--YIIS 101
Query: 242 QGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
Q R L + + I S + Y+H HRD++P N+L D+ + ++ +FGL
Sbjct: 102 QDR--LSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCA 156
Query: 302 RIPDGHTRTTTWSLAGTVGYIAPECHQTVA-LSDTCDIYSFGVLLAVLVIGKFPSDD 357
+ P G+ + G++ Y APE Q + L D++S G+LL VL+ G P DD
Sbjct: 157 K-PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + LV E+ G + D L V+ GR + + AR + Q I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKFRQ-IVSA 125
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H I+HRD++ N+L+D DM +I++FG + G+ T G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 202 QVRHRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIA 260
Q+RH N+V LL +V L +V E+ GSL D L S+GR L + + +
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVC 118
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
+EYL ++ +HRD+ NVL+ +D A++S+FGL K + + T L V
Sbjct: 119 EAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVK 170
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ APE + A S D++SFG+LL + G+ P
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 205 HRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E+LH + II+RD++P NVL+DDD RIS+ GLA + G T+T + AGT G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 324 PECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
PE + D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 157 GSSGRVITIKKIIQPLKSG----AELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL 212
GS G+V ++K+ +P SG +++KK + + + ++ + E V H +V L
Sbjct: 39 GSFGKVFLVRKVTRP-DSGHLYAMKVLKKATLKVRDR-VRTKMERDILADVNHPFVVKLH 96
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
L+ +F R G D+ +S+ + + +A+ +A GL++LH
Sbjct: 97 YAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LALGLDHLHSL--- 149
Query: 273 RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
II+RD++P N+L+D++ ++++FGL+K D + +S GTV Y+APE
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK--AYSFCGTVEYMAPEVVNRQGH 207
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
S + D +S+GVL+ ++ G P
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLP 229
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 205 HRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E+LH + II+RD++P NVL+DDD RIS+ GLA + G T+T + AGT G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 324 PECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
PE + D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 205 HRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E+LH + II+RD++P NVL+DDD RIS+ GLA + G T+T + AGT G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 324 PECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
PE + D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + LV E+ G + D L V+ GR + + AR + Q I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKFRQ-IVSA 125
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H I+HRD++ N+L+D DM +I++FG + G+ T G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLL----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRE 246
++ R E A + H IV + A +V E+ +L+DI++ ++G
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEG--- 111
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD- 305
+ R + IA + L+ SH+ IIHRD++PAN++I ++ +FG+A+ I D
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP-SDD-----FF 359
G++ T T ++ GT Y++PE + ++ D+YS G +L ++ G+ P + D +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
Query: 360 QHTKEMSLVQWMRN 373
QH +E + R+
Sbjct: 230 QHVREDPIPPSARH 243
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 205 HRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E+LH + II+RD++P NVL+DDD RIS+ GLA + G T+T + AGT G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 324 PECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
PE + D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLL----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRE 246
++ R E A + H IV + A +V E+ +L+DI++ ++G
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEG--- 111
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD- 305
+ R + IA + L+ SH+ IIHRD++PAN++I ++ +FG+A+ I D
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFG-VLLAVLV-----IGKFPSDDFF 359
G++ T T ++ GT Y++PE + ++ D+YS G VL VL G P +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
Query: 360 QHTKEMSLVQWMRN 373
QH +E + R+
Sbjct: 230 QHVREDPIPPSARH 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTR 309
AR+ + Q I G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I DG +
Sbjct: 128 ARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 183
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
L GT YIAPE S DI+S G +L L++GK P
Sbjct: 184 K---DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ GSL+D L G +L A Q I G+ YLH H IHR +
Sbjct: 89 LVMEYVPLGSLRDYLPRHCVGLAQLLLFA-----QQICEGMAYLHAQH---YIHRALAAR 140
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT-VGYIAPECHQTVALSDTCDIYSF 341
NVL+D+D +I +FGLAK +P+GH + V + APEC + D++SF
Sbjct: 141 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 200
Query: 342 GVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMT 376
GV L L+ + + HTK L+ + MT
Sbjct: 201 GVTLYELLT--YCDSNQSPHTKFTELIGHTQGQMT 233
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ GSL+D L S G +L A Q I G+ YLH H IHR++
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFA-----QQICEGMAYLHAQH---YIHRNLAAR 146
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT-VGYIAPECHQTVALSDTCDIYSF 341
NVL+D+D +I +FGLAK +P+GH + V + APEC + D++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 342 GVLLAVLV 349
GV L L+
Sbjct: 207 GVTLYELL 214
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLA----RMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRE 246
++ R E A + H IV + A +V E+ +L+DI++ ++G
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEG--- 111
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD- 305
+ R + IA + L+ SH+ IIHRD++PAN++I ++ +FG+A+ I D
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFG-VLLAVLV-----IGKFPSDDFF 359
G++ T T ++ GT Y++PE + ++ D+YS G VL VL G P +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
Query: 360 QHTKEMSLVQWMRN 373
QH +E + R+
Sbjct: 230 QHVREDPIPPSARH 243
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ GSL+D L G +L A Q I G+ YLH H IHR +
Sbjct: 90 LVMEYVPLGSLRDYLPRHCVGLAQLLLFA-----QQICEGMAYLHAQH---YIHRALAAR 141
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT-VGYIAPECHQTVALSDTCDIYSF 341
NVL+D+D +I +FGLAK +P+GH + V + APEC + D++SF
Sbjct: 142 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 201
Query: 342 GVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMT 376
GV L L+ + + HTK L+ + MT
Sbjct: 202 GVTLYELLT--YCDSNQSPHTKFTELIGHTQGQMT 234
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 107
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P T
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT- 166
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 167 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 224 FTFPDFVTEGARDLISRLLKHNPSQRPML 252
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTR 309
AR+ + Q I G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I DG +
Sbjct: 144 ARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
L GT YIAPE S DI+S G +L L++GK P
Sbjct: 200 K---XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTR 309
AR+ + Q I G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I DG +
Sbjct: 144 ARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
L GT YIAPE S DI+S G +L L++GK P
Sbjct: 200 K---DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ GSL+D L S G +L A Q I G+ YLH H IHR++
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFA-----QQICEGMAYLHSQH---YIHRNLAAR 146
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT-VGYIAPECHQTVALSDTCDIYSF 341
NVL+D+D +I +FGLAK +P+GH + V + APEC + D++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 342 GVLLAVLV 349
GV L L+
Sbjct: 207 GVTLYELL 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + L+ E+ G + D Y V+ GR + + AR + Q I S
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMK-EKEARSKFRQ-IVSA 126
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H+ RI+HRD++ N+L+D DM +I++FG + G + G Y
Sbjct: 127 VQY---CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD---AFCGAPPYA 180
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 192 QIRSEIITAGQVRHRNIVPLLA---RMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRREL 247
Q E+ + ++H NI+ + R D DL L+ F GSL D L +
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVV 118
Query: 248 DWLARHRIAQGIASGLEYLHM-------SHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
W IA+ +A GL YLH H+P I HRDI+ NVL+ +++ A I++FGLA
Sbjct: 119 SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
Query: 301 KRIPDGHTRTTTWSLAGTVGYIAPE 325
+ G + T GT Y+APE
Sbjct: 179 LKFEAGKSAGDTHGQVGTRRYMAPE 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 111
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 169
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
T L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 170 T--LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 370 WMRNVMTSENPNRAINSKLL 389
+ +E R + S+LL
Sbjct: 228 FTFPDFVTEG-ARDLISRLL 246
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 129/282 (45%), Gaps = 45/282 (15%)
Query: 160 GRVITIKKIIQPLKSGAELIKKDSE---PLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GR++ K ++ +KS LI DSE + K + + E+ + H NIV L M
Sbjct: 38 GRLVKDKSVVA-IKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM- 92
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ +V EF G L L D + + W + R+ IA G+EY+ + P I+H
Sbjct: 93 -HNPPRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQ-NQNPPIVH 147
Query: 277 RDIQPANVLIDDDME-----ARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC--HQT 329
RD++ N+ + E A++++FGL+++ + + L G ++APE +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGNFQWMAPETIGAEE 202
Query: 330 VALSDTCDIYSFGVLLAVLVIGKFPSDDF-FQHTKEMSLV--QWMRNVMTSENPNRAINS 386
+ ++ D YSF ++L ++ G+ P D++ + K ++++ + +R + + P R N
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN- 261
Query: 387 KLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
+ C DP KRP+ + LS++
Sbjct: 262 ----------------VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLL----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRE 246
++ R E A + H IV + A +V E+ +L+DI++ ++G
Sbjct: 74 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEG--- 128
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD- 305
+ R + IA + L+ SH+ IIHRD++PAN++I ++ +FG+A+ I D
Sbjct: 129 --PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFG-VLLAVLV-----IGKFPSDDFF 359
G++ T T ++ GT Y++PE + ++ D+YS G VL VL G P +
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
Query: 360 QHTKEMSLVQWMRN 373
QH +E + R+
Sbjct: 247 QHVREDPIPPSARH 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 107
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 165
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 166 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 224 FTFPDFVTEGARDLISRLLKHNPSQRPML 252
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 164
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 165 --ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 164
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 165 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 164
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 165 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 123
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKW 179
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKW 180
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 111
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 169
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 170 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +R T
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRT 164
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 165 X--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G + L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-------FD 111
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SR 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 125 EDLAF--LEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKD 182
E+L F ++ E+ F LEKI GEV+K + + +V+ IK I D
Sbjct: 16 ENLYFQSMDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------D 61
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
E ++ I+ EI Q + ++ ++ E+ GS D+L
Sbjct: 62 LEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--- 118
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
LD I + I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A +
Sbjct: 119 --GPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQ 173
Query: 303 IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF 358
+ D + T+ GT ++APE + A DI+S G+ L G+ P +
Sbjct: 174 LTDTQIKRNTF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 135
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 191
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 233
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 18/194 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLL----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRE 246
++ R E A + H IV + A +V E+ +L+DI++ ++G
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEG--- 111
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD- 305
+ R + IA + L+ SH+ IIHRD++PAN+LI ++ +FG+A+ I D
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP-SDD-----FF 359
G++ T ++ GT Y++PE + ++ D+YS G +L ++ G+ P + D +
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
Query: 360 QHTKEMSLVQWMRN 373
QH +E + R+
Sbjct: 230 QHVREDPIPPSARH 243
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 123
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKW 179
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 183
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 180
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ REL L+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 107
Query: 252 R---HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
R R A I L H R+IHRDI+P N+L+ + E +I++FG + P +
Sbjct: 108 RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS--S 165
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIG--KFPSDDFFQHTKEMS 366
R TT L GT+ Y+ PE + + D++S GVL ++G F + + + + +S
Sbjct: 166 RRTT--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 367 LVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLV 400
V++ +E R + S+LL + +++ L
Sbjct: 224 RVEFTFPDFVTEG-ARDLISRLLKHNASQRLTLA 256
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 31/238 (13%)
Query: 123 KEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSG-AELIKK 181
KE D++ ++ E + E C +G + +LPG + IK LKSG E ++
Sbjct: 28 KEIDISCVKIEQVIGAGEFGEVC-SGHL---KLPGKREIFVAIKT----LKSGYTEKQRR 79
Query: 182 DSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVS 241
D SE GQ H N++ L + + +++ EF NGSL L
Sbjct: 80 D----------FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---R 126
Query: 242 QGRRELDWLARHRIAQGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
Q + + + +GIA+G++YL M++ +HRD+ N+L++ ++ ++S+FGL+
Sbjct: 127 QNDGQFTVIQLVGMLRGIAAGMKYLADMNY----VHRDLAARNILVNSNLVCKVSDFGLS 182
Query: 301 KRIPDGHTRTT-TWSLAGTVG--YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + D + T T +L G + + APE Q + D++S+G+++ V+ G+ P
Sbjct: 183 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 180
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 49 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 104
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 105 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 219
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 220 -KEKKTYLNPWKKIDSAPLA 238
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKW 183
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + LV E+ G + D L V+ GR + + AR + Q I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKFRQ-IVSA 125
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H I+HRD++ N+L+D DM +I++FG + G+ + G Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD---AFCGAPPYA 179
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL----ARHRIAQG 258
+ H NIV L + LV E+ G + D L V+ G W+ AR + Q
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG-----WMKEKEARAKFRQ- 114
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S ++Y H I+HRD++ N+L+D DM +I++FG + G+ T G+
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGS 168
Query: 319 VGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
Y APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SR 162
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
+L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SR 165
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
+L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 166 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 183
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + LV E+ G + D L V+ GR + + AR + Q I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKFRQ-IVSA 125
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H I+HRD++ N+L+D DM +I++FG + G+ G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD---EFCGSPPYA 179
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 126
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 127 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 182
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 224
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 183
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+ E +++H N+V LL R ++ EF G+L D L + + R+E++ +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVV 112
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
+A I+S +EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 168
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
+ + APE S D+++FGVLL A + +P D Q
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 108
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 168 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 225 FTFPDFVTEGARDLISRLLKHNPSQRPML 253
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G V+ K + + ++IKK S + E+ Q+ H NI+ L
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E R G L D + + Q E+D I + + SG YLH + I+H
Sbjct: 75 DKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV---IMKQVLSGTTYLH---KHNIVH 127
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
RD++P N+L++ D +I +FGL+ G GT YIAPE +
Sbjct: 128 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER---LGTAYYIAPEVLRK-KYD 183
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 184 EKCDVWSCGVILYILLCGYPP 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 130 LEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHK 189
L+ E+ F LEKI GEV+K + + +V+ IK I D E +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------DLEEAEDE 48
Query: 190 MIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
+ I+ EI Q + ++ ++ E+ GS D+L LD
Sbjct: 49 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDE 103
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
I + I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A ++ D +
Sbjct: 104 TQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF 358
T+ GT ++APE + A DI+S G+ L G+ P +
Sbjct: 161 RNTF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 221 -KEKKTYLNPWKKIDSAPLA 239
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 168
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA +
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 312 TWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQW 370
+ GT+ Y+APE + ++ D++S G++L ++ G+ P D +E S W
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
Query: 371 MRNVMTSENPNRAINSKLLG 390
+ T NP + I+S L
Sbjct: 222 -KEKKTYLNPWKKIDSAPLA 240
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SR 162
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 131 EKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKM 190
+ E+ F LE+I GEV+K + + +V+ IK I D E ++
Sbjct: 20 DPEELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKII-------------DLEEAEDEI 65
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ EI Q + ++ ++ E+ GS D+L D
Sbjct: 66 EDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-----AGPFDEF 120
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
+ + I GL+YLH + IHRDI+ ANVL+ + + ++++FG+A ++ D +
Sbjct: 121 QIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 177
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
T+ GT ++APE Q A DI+S G+ L G+ P+ D
Sbjct: 178 NTF--VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 222
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 127
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 183
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 153 AELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQ--IRSEIITAGQVRHRNIVP 210
+EL +G V+T +Q SG + +K L H I+ IR++II QV H P
Sbjct: 22 SELGAGNGGVVTK---VQHRPSGLIMARK----LIHLEIKPAIRNQIIRELQVLHECNSP 74
Query: 211 LLARM---VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
+ D ++ + E GSL +L + + E+ L + IA + GL YL
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI--LGKVSIA--VLRGLAYL 130
Query: 267 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC 326
H+ I+HRD++P+N+L++ E ++ +FG++ ++ D + S GT Y+APE
Sbjct: 131 REKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMAPER 184
Query: 327 HQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Q S DI+S G+ L L +G++P
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G V+ K + + ++IKK S + E+ Q+ H NI+ L
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 91
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E R G L D + + Q E+D I + + SG YLH + I+H
Sbjct: 92 DKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV---IMKQVLSGTTYLH---KHNIVH 144
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
RD++P N+L++ D +I +FGL+ G GT YIAPE +
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER---LGTAYYIAPEVLRK-KYD 200
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 201 EKCDVWSCGVILYILLCGYPP 221
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 132
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD-- 190
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 191 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 249 FTFPDFVTEGARDLISRLLKHNPSQRPML 277
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARH 253
+E Q+RH N+V LL +V L +V E+ GSL D L S+GR L
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLL 105
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
+ + + +EYL ++ +HRD+ NVL+ +D A++S+FGL K + + T
Sbjct: 106 KFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTG 159
Query: 314 SLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L V + APE + S D++SFG+LL + G+ P
Sbjct: 160 KLP--VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 202 QVRHRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIA 260
Q+RH N+V LL +V L +V E+ GSL D L S+GR L + + +
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVC 127
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
+EYL ++ +HRD+ NVL+ +D A++S+FGL K + + T L V
Sbjct: 128 EAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLP--VK 179
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ APE + S D++SFG+LL + G+ P
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 45/282 (15%)
Query: 160 GRVITIKKIIQPLKSGAELIKKDSE---PLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GR++ K ++ +KS LI DSE + K + + E+ + H NIV L M
Sbjct: 38 GRLVKDKSVVA-IKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM- 92
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ +V EF G L L D + + W + R+ IA G+EY+ + P I+H
Sbjct: 93 -HNPPRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQ-NQNPPIVH 147
Query: 277 RDIQPANVLIDDDME-----ARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC--HQT 329
RD++ N+ + E A++++FG +++ + + L G ++APE +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-----SVHSVSGLLGNFQWMAPETIGAEE 202
Query: 330 VALSDTCDIYSFGVLLAVLVIGKFPSDDF-FQHTKEMSLV--QWMRNVMTSENPNRAINS 386
+ ++ D YSF ++L ++ G+ P D++ + K ++++ + +R + + P R N
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN- 261
Query: 387 KLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
+ C DP KRP+ + LS++
Sbjct: 262 ----------------VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G VI K I + ++I K + E+ Q+ H NI+ L
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 96
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E G L +D R+ + RI + + SG+ Y+H + +I+H
Sbjct: 97 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 149
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC-HQTVAL 332
RD++P N+L++ D RI +FGL+ GT YIAPE H T
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEVLHGT--Y 204
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPP 226
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H R+IHRDI+P N+L+ E +I++FG + P
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD-- 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 168 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 202 QVRHRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIA 260
Q+RH N+V LL +V L +V E+ GSL D L S+GR L + + +
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVC 299
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
+EYL ++ +HRD+ NVL+ +D A++S+FGL K + + T L V
Sbjct: 300 EAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLP--VK 351
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ APE + S D++SFG+LL + G+ P
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKW 176
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDD 357
APE S D+++FGVLL A + +P D
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ REL L+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 107
Query: 252 R---HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
R R A I L H R+IHRDI+P N+L+ + E +I++FG + P
Sbjct: 108 RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIG--KFPSDDFFQHTKEMS 366
T L GT+ Y+ PE + + D++S GVL ++G F + + + + +S
Sbjct: 168 DT----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 367 LVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLV 400
V++ +E R + S+LL + +++ L
Sbjct: 224 RVEFTFPDFVTEG-ARDLISRLLKHNASQRLTLA 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL-ARHRIAQGI- 259
+V H NIV L + C LV E+ GSL Y+V G L + A H ++ +
Sbjct: 58 RVNHPNIVKLYGACLNPVC--LVMEYAEGGSL----YNVLHGAEPLPYYTAAHAMSWCLQ 111
Query: 260 -ASGLEYLHMSHRPRIIHRDIQPANVL-IDDDMEARISEFGLAKRIPDGHTRTTTWSLAG 317
+ G+ YLH +IHRD++P N+L + +I +FG A I T G
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-----G 166
Query: 318 TVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTS 377
+ ++APE + S+ CD++S+G++L ++ + P D+ R +
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--------FRIMWAV 218
Query: 378 ENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
N R K L E M C DP++RP+ +++ +++ +
Sbjct: 219 HNGTRPPLIKNLPKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL-ARHR 254
E+ +V H NIV L + C LV E+ GSL Y+V G L + A H
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSL----YNVLHGAEPLPYYTAAHA 104
Query: 255 IAQGI--ASGLEYLHMSHRPRIIHRDIQPANVL-IDDDMEARISEFGLAKRIPDGHTRTT 311
++ + + G+ YLH +IHRD++P N+L + +I +FG A I T
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWM 371
G+ ++APE + S+ CD++S+G++L ++ + P D+
Sbjct: 165 -----GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--------F 211
Query: 372 RNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
R + N R K L E M C DP++RP+ +++ +++ +
Sbjct: 212 RIMWAVHNGTRPPLIKNLPKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHL 261
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 45/282 (15%)
Query: 160 GRVITIKKIIQPLKSGAELIKKDSE---PLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GR++ K ++ +KS LI DSE + K + + E+ + H NIV L M
Sbjct: 38 GRLVKDKSVVA-IKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM- 92
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ +V EF G L L D + + W + R+ IA G+EY+ + P I+H
Sbjct: 93 -HNPPRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQ-NQNPPIVH 147
Query: 277 RDIQPANVLIDDDME-----ARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC--HQT 329
RD++ N+ + E A++++F L+++ + + L G ++APE +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFSLSQQ-----SVHSVSGLLGNFQWMAPETIGAEE 202
Query: 330 VALSDTCDIYSFGVLLAVLVIGKFPSDDF-FQHTKEMSLV--QWMRNVMTSENPNRAINS 386
+ ++ D YSF ++L ++ G+ P D++ + K ++++ + +R + + P R N
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN- 261
Query: 387 KLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
+ C DP KRP+ + LS++
Sbjct: 262 ----------------VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 193 IRSEIITAGQVRHRNIVPLLARM---VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELD 248
IR++II QV H P + D ++ + E GSL +L GR
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQ 131
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
L + IA + GL YL H+ I+HRD++P+N+L++ E ++ +FG++ ++ D
Sbjct: 132 ILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 184
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ S GT Y++PE Q S DI+S G+ L + +G++P
Sbjct: 185 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A I L H ++IHRDI+P N+L+ E +I++FG + P +
Sbjct: 107 EQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SR 162
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHT-KEMSLVQ 369
+L GT+ Y+ PE + + D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVE 222
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQML 398
+ +E I+ L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKW 176
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDD 357
APE S D+++FGVLL A + +P D
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM- 215
G+ G V + L +LI + +P IR++II QV H P +
Sbjct: 36 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 89
Query: 216 --VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 90 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 144
Query: 273 RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
I+HRD++P+N+L++ E ++ +FG++ ++ D + S GT Y++PE Q
Sbjct: 145 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHY 199
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
S DI+S G+ L + +G++P
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G VI K I + ++I K + E+ Q+ H NI+ L
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 119
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E G L +D R+ + RI + + SG+ Y+H + +I+H
Sbjct: 120 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 172
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC-HQTVAL 332
RD++P N+L++ D RI +FGL+ GT YIAPE H T
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEVLHGT--Y 227
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 228 DEKCDVWSTGVILYILLSGCPP 249
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
++H +V L A + R + ++ E+ GSL D L G+ L L + IA G
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID--FSAQIAEG 122
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
+ Y+ R IHRD++ ANVL+ + + +I++FGLA+ I D + T + +
Sbjct: 123 MAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWT 178
Query: 323 APECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
APE + D++SFG+LL ++ GK P
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G VI K I + ++I K + E+ Q+ H NI+ L
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 120
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E G L +D R+ + RI + + SG+ Y+H + +I+H
Sbjct: 121 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 173
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC-HQTVAL 332
RD++P N+L++ D RI +FGL+ GT YIAPE H T
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEVLHGT--Y 228
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 229 DEKCDVWSTGVILYILLSGCPP 250
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 130 LEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHK 189
++ E+ F L++I GEVYK + + V+ IK I D E +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKII-------------DLEEAEDE 60
Query: 190 MIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
+ I+ EI Q I ++ ++ E+ GS D+L G E +
Sbjct: 61 IEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETY 117
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
+A I + I GL+YLH R IHRDI+ ANVL+ + + ++++FG+A ++ D +
Sbjct: 118 IAT--ILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 172
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF 358
+ GT ++APE + A DI+S G+ L G+ P+ D
Sbjct: 173 RNXF--VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 193 IRSEIITAGQVRHRNIVPLLARM---VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELD 248
IR++II QV H P + D ++ + E GSL +L GR
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQ 166
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
L + IA + GL YL H+ I+HRD++P+N+L++ E ++ +FG++ ++ D
Sbjct: 167 ILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 219
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ S GT Y++PE Q S DI+S G+ L + +G++P
Sbjct: 220 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G VI K I + ++I K + E+ Q+ H NI+ L
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 102
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E G L +D R+ + RI + + SG+ Y+H + +I+H
Sbjct: 103 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 155
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC-HQTVAL 332
RD++P N+L++ D RI +FGL+ GT YIAPE H T
Sbjct: 156 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPEVLHGT--Y 210
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 211 DEKCDVWSTGVILYILLSGCPP 232
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIKW 176
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDD 357
APE S D+++FGVLL A + +P D
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + S GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + S + D+++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 24/173 (13%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIAQGIASGL 263
H +I+ L+ LV++ R G L D L + V+ +E + R S L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR--------SLL 210
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E + H I+HRD++P N+L+DD+M+ R+S+FG + + G L GT GY+A
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLA 267
Query: 324 PECHQTVALSDT-------CDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ 369
PE + ++ +T D+++ GV+L L+ G P F H +++ +++
Sbjct: 268 PEILK-CSMDETHPGYGKEVDLWACGVILFTLLAGSPP----FWHRRQILMLR 315
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 60/293 (20%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRH----------- 205
G+ G+V+ + + + I+ E K+ I SE++ + H
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEE----KLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 206 --RNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY--DVSQGRRELDWLARHRIAQGIAS 261
RN V + + ++ + E+ NG+L D+++ +++Q R E W R+ + I
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-W----RLFRQILE 127
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI--------------PDGH 307
L Y+H IIHRD++P N+ ID+ +I +FGLAK + P
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 308 TRTTTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMS 366
T S GT Y+A E T ++ D+YS G++ ++ +P F + ++
Sbjct: 185 DNLT--SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YP---FSTGMERVN 236
Query: 367 LVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
+++ +R+V P+ N +M + KI DPNKRP ++
Sbjct: 237 ILKKLRSVSIEFPPDFDDN----------KMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 326
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHR++ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 327 AMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 382
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 424
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H N++ + + + + E+ + G+L+ I+ + + W R A+ IASG
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASG 120
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT------------RT 310
+ YLH + IIHRD+ N L+ ++ +++FGLA+ + D T R
Sbjct: 121 MAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD-DFFQHTKEMSLVQ 369
+++ G ++APE + + D++SFG++L +IG+ +D D+ T + L
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE-IIGRVNADPDYLPRTMDFGLN- 235
Query: 370 WMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPN 417
+R + P S + + C C L DP KRP+
Sbjct: 236 -VRGFLDRYCPPNCPPS-----------FFPITVRC-CDL-DPEKRPS 269
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 126
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 127 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 182
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
APE + D++SFG+LL +V G+ P M N +N
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 229
Query: 381 NRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCML 425
R N EE + ++ C + P RP +R +L
Sbjct: 230 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 73 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 129
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 130 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 185
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
+ H NIV L + LV E+ G + D L V+ GR + + AR + Q I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL--VAHGRXK-EKEARAKFRQ-IVSA 125
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
++Y H I+HRD++ N+L+D D +I++FG + G+ + G Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD---AFCGAPPYA 179
Query: 323 APECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
APE Q D++S GV+L LV G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKW 176
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
APE + D++SFG+LL +V G+ P M N +N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 223
Query: 381 NRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCML 425
R N EE + ++ C + P RP +R +L
Sbjct: 224 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 72 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 128
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 129 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 184
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 65 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 121
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 122 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 177
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 368
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHR++ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 369 AMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 424
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 466
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 66 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 123 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 130 LEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHK 189
L+ E+ F LEKI GEV+K + + +V+ IK I D E +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------DLEEAEDE 48
Query: 190 MIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
+ I+ EI Q + ++ ++ E+ GS D+L LD
Sbjct: 49 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDE 103
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
I + I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A ++ D +
Sbjct: 104 TQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF 358
+ GT ++APE + A DI+S G+ L G+ P +
Sbjct: 161 RNXF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 176
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM- 215
G+ G V + L +LI + +P IR++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 216 --VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 273 RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
I+HRD++P+N+L++ E ++ +FG++ ++ D + S GT Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHY 180
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
S DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM- 215
G+ G V + L +LI + +P IR++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 216 --VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 273 RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
I+HRD++P+N+L++ E ++ +FG++ ++ D + S GT Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHY 180
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
S DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 69 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 126 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ EKI +G VY A + ++G+ + I+++ + ELI +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 66
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWS 314
LE+LH + ++IHRDI+ N+L+ D ++++FG +I P+ R+T
Sbjct: 127 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--- 175
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ GT ++APE A DI+S G++ ++ G+ P
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 176
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 126
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 127 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 182
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM- 215
G+ G V + L +LI + +P IR++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 216 --VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 273 RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
I+HRD++P+N+L++ E ++ +FG++ ++ D + S GT Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHY 180
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
S DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM- 215
G+ G V + L +LI + +P IR++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 216 --VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 273 RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
I+HRD++P+N+L++ E ++ +FG++ ++ D + S GT Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHY 180
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
S DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 74 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 130
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 131 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 186
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 64/339 (18%)
Query: 109 GSRDRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIK 166
GS DR P F +E L FL++ + F S+E R L ++G V+ +K
Sbjct: 1 GSEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVK 48
Query: 167 KIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLL 223
K L+ E +D E EI ++H NIV + RR+ L+
Sbjct: 49 K----LQHSTEEHLRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 94
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
+ E+ GSL+D L + + +D + + I G+EYL R IHRD+ N
Sbjct: 95 M-EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRN 147
Query: 284 VLIDDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFG 342
+L++++ +I +FGL K +P D + + APE S D++SFG
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 343 VLLAVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLG 390
V+L L K P +F + L++ ++N P
Sbjct: 208 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP---------- 257
Query: 391 NGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+G +++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 258 DGCPDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 176
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 193 IRSEIITAGQVRHRNIVPLLARM---VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELD 248
IR++II QV H P + D ++ + E GSL +L GR
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQ 104
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
L + IA + GL YL H+ I+HRD++P+N+L++ E ++ +FG++ ++ D
Sbjct: 105 ILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 157
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ S GT Y++PE Q S DI+S G+ L + +G++P
Sbjct: 158 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 59 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 115
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I D T + +
Sbjct: 116 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 171
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 329
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHR++ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 330 AMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 385
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 427
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
++H +V L A + + + ++ EF GSL D L G+ L L + IA G
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID--FSAQIAEG 121
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
+ Y+ R IHRD++ ANVL+ + + +I++FGLA+ I D + T + +
Sbjct: 122 MAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWT 177
Query: 323 APECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
APE + +++SFG+LL ++ GK P
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 31/241 (12%)
Query: 123 KEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSG-AELIKK 181
KE D++ ++ E + E C +G + +LPG + IK LKSG E ++
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVC-SGHL---KLPGKREIFVAIKT----LKSGYTEKQRR 53
Query: 182 DSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVS 241
D SE GQ H N++ L + + +++ EF NGSL L
Sbjct: 54 D----------FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---R 100
Query: 242 QGRRELDWLARHRIAQGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
Q + + + +GIA+G++YL M++ +HR + N+L++ ++ ++S+FGL+
Sbjct: 101 QNDGQFTVIQLVGMLRGIAAGMKYLADMNY----VHRALAARNILVNSNLVCKVSDFGLS 156
Query: 301 KRIPDGHTRTT-TWSLAGTVG--YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSD 356
+ + D + T T +L G + + APE Q + D++S+G+++ V+ G+ P
Sbjct: 157 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 216
Query: 357 D 357
D
Sbjct: 217 D 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 33/242 (13%)
Query: 123 KEEDLAFLEKEDYFASLEKIRSCWNGEVYKAEL--PGSSGRVITIKKIIQPLKSGAELIK 180
KE D+++++ E+ + E GEV + L PG + IK LK G
Sbjct: 9 KEIDVSYVKIEEVIGAGE------FGEVCRGRLKAPGKKESCVAIKT----LKGGYT--- 55
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
+ + SE GQ H NI+ L + +++ EF NG+L L +
Sbjct: 56 ------ERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RL 108
Query: 241 SQGRRELDWLARHRIAQGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ G+ + L + +GIASG+ YL MS+ +HRD+ N+L++ ++ ++S+FGL
Sbjct: 109 NDGQFTVIQLVG--MLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGL 162
Query: 300 AKRIPDGHTRTT-TWSLAGTVG--YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPS 355
++ + + + T T SL G + + APE + D +S+G+++ V+ G+ P
Sbjct: 163 SRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 222
Query: 356 DD 357
D
Sbjct: 223 WD 224
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 254
SE GQ H NI+ L + R ++V E+ NGSL D G+ + L
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVG-- 155
Query: 255 IAQGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRT 310
+ +G+ +G+ YL + + +HRD+ NVL+D ++ ++S+FGL++ + PD T
Sbjct: 156 MLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
T + + + APE S D++SFGV++ VL G+ P
Sbjct: 212 TGGKIP--IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G VI K I + ++I K + E+ Q+ H NI L
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E G L +D R+ + RI + + SG+ Y H+ +I+H
Sbjct: 97 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITY---XHKNKIVH 149
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC-HQTVAL 332
RD++P N+L++ D RI +FGL+ GT YIAPE H T
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIAPEVLHGT--Y 204
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPP 226
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 148/354 (41%), Gaps = 66/354 (18%)
Query: 96 LTTTSRILAAGRGGS--RDRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVY 151
+ TT + G GS DR P F +E L FL++ + F S+E R
Sbjct: 14 IPTTENLYFQGAMGSAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY------- 62
Query: 152 KAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP- 210
L ++G V+ +KK L+ E +D E EI ++H NIV
Sbjct: 63 -DPLQDNTGEVVAVKK----LQHSTEEHLRDFE----------REIEILKSLQHDNIVKY 107
Query: 211 --LLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHM 268
+ RR+ L++ E+ GSL+D L + + +D + + I G+EYL
Sbjct: 108 KGVCYSAGRRNLKLIM-EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 269 SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECH 327
R IHRD+ N+L++++ +I +FGL K +P D + + APE
Sbjct: 164 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 328 QTVALSDTCDIYSFGVLLAVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVM 375
S D++SFGV+L L K P +F + L++ ++N
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 280
Query: 376 TSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
P +G +++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 281 RLPRP----------DGCPDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 185 PLHHKM-IQIRSEIITAGQVRHRNIVPLLARMVRRDCDL-----LVYEFRRNGSLQDILY 238
PL K Q EI + ++H N++ +A +R +L L+ F GSL D L
Sbjct: 47 PLQDKQSWQSEREIFSTPGMKHENLLQFIA-AEKRGSNLEVELWLITAFHDKGSLTDYLK 105
Query: 239 DVSQGRRELDWLARHRIAQGIASGLEYLHM--------SHRPRIIHRDIQPANVLIDDDM 290
+ W +A+ ++ GL YLH H+P I HRD + NVL+ D+
Sbjct: 106 G-----NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDL 160
Query: 291 EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD-----TCDIYSFGVLL 345
A +++FGLA R G T GT Y+APE + D+Y+ G++L
Sbjct: 161 TAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 220
Query: 346 AVLV 349
LV
Sbjct: 221 WELV 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMS------HRPRII 275
LLV E+ NGSL L DW++ R+A + GL YLH ++P I
Sbjct: 88 LLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAIS 142
Query: 276 HRDIQPANVLIDDDMEARISEFGLAKRIPD------GHTRTTTWSLAGTVGYIAPECHQ- 328
HRD+ NVL+ +D IS+FGL+ R+ G S GT+ Y+APE +
Sbjct: 143 HRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202
Query: 329 TVALSDT------CDIYSFGVL 344
V L D D+Y+ G++
Sbjct: 203 AVNLRDXESALKQVDMYALGLI 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 24/173 (13%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIAQGIASGL 263
H NI+ L LV++ + G L D L + V+ +E + R + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR--------ALL 134
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E + H+ I+HRD++P N+L+DDDM ++++FG + ++ G S+ GT Y+A
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYLA 191
Query: 324 PECHQTVALSDT-------CDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ 369
PE + +++D D++S GV++ L+ G P F H K+M +++
Sbjct: 192 PEIIE-CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLR 239
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 254
SE GQ H NI+ L + R ++V E+ NGSL D G+ + L
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVG-- 155
Query: 255 IAQGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRT 310
+ +G+ +G+ YL + + +HRD+ NVL+D ++ ++S+FGL++ + PD T
Sbjct: 156 MLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
T + + + APE S D++SFGV++ VL G+ P
Sbjct: 212 TGGKIP--IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 33/242 (13%)
Query: 123 KEEDLAFLEKEDYFASLEKIRSCWNGEVYKAEL--PGSSGRVITIKKIIQPLKSGAELIK 180
KE D+++++ E+ + E GEV + L PG + IK LK G
Sbjct: 11 KEIDVSYVKIEEVIGAGEF------GEVCRGRLKAPGKKESCVAIKT----LKGGY---- 56
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
+ + SE GQ H NI+ L + +++ EF NG+L L +
Sbjct: 57 -----TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-L 110
Query: 241 SQGRRELDWLARHRIAQGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ G+ + L + +GIASG+ YL MS+ +HRD+ N+L++ ++ ++S+FGL
Sbjct: 111 NDGQFTVIQLVG--MLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGL 164
Query: 300 AKRIPDGHTRTT-TWSLAGTVG--YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPS 355
++ + + + T T SL G + + APE + D +S+G+++ V+ G+ P
Sbjct: 165 SRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 224
Query: 356 DD 357
D
Sbjct: 225 WD 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + S GT
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Query: 149 EVYKAELPGSSGRVITIKKIIQPLKSGAE--------LIKKDSEPLHHKMIQIRSEIITA 200
E+ K GS G+V +KKI SG++ ++KK + + + ++ + E
Sbjct: 28 ELLKVLGQGSFGKVFLVKKI-----SGSDARQLYAMKVLKKATLKVRDR-VRTKMERDIL 81
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIA 260
+V H IV L L+ +F R G D+ +S+ + + +A+ +A
Sbjct: 82 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LA 137
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
L++LH II+RD++P N+L+D++ ++++FGL+K D + +S GTV
Sbjct: 138 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVE 192
Query: 321 YIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y+APE + + D +SFGVL+ ++ G P
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 157 GSSGRVITIKKIIQPLKSGAE--------LIKKDSEPLHHKMIQIRSEIITAGQVRHRNI 208
GS G+V +KKI SG++ ++KK + + + ++ + E +V H I
Sbjct: 35 GSFGKVFLVKKI-----SGSDARQLYAMKVLKKATLKVRDR-VRTKMERDILVEVNHPFI 88
Query: 209 VPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHM 268
V L L+ +F R G D+ +S+ + + +A+ +A L++LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHS 144
Query: 269 SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
II+RD++P N+L+D++ ++++FGL+K D + +S GTV Y+APE
Sbjct: 145 L---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVVN 199
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D +SFGVL+ ++ G P
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Query: 149 EVYKAELPGSSGRVITIKKIIQPLKSGAE--------LIKKDSEPLHHKMIQIRSEIITA 200
E+ K GS G+V +KKI SG++ ++KK + + + ++ + E
Sbjct: 27 ELLKVLGQGSFGKVFLVKKI-----SGSDARQLYAMKVLKKATLKVRDR-VRTKMERDIL 80
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIA 260
+V H IV L L+ +F R G D+ +S+ + + +A+ +A
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LA 136
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
L++LH II+RD++P N+L+D++ ++++FGL+K D + +S GTV
Sbjct: 137 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVE 191
Query: 321 YIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y+APE + + D +SFGVL+ ++ G P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + S GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 150 VYKAELPGSS--GRVITIKKIIQPLKSGAELIK----KDSEPLHHKMIQIRSEIITAGQV 203
V K E+ G G+V ++ LK A++IK KD E ++++EI Q+
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE-------EVKNEISVMNQL 143
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
H N++ L ++ +LV E+ G L D + D S ELD + + I G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL---FMKQICEGI 200
Query: 264 EYLHMSHRPRIIHRDIQPANVLI--DDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
++H + I+H D++P N+L D + +I +FGLA+R + GT +
Sbjct: 201 RHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEF 254
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+APE +S D++S GV+ +L+ G P
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 24/228 (10%)
Query: 131 EKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKM 190
+ E+ F LEKI GEV+K + + +V+ IK I D E ++
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------DLEEAEDEI 64
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ EI Q + ++ ++ E+ GS D+L LD
Sbjct: 65 EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDET 119
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
I + I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A ++ D +
Sbjct: 120 QIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF 358
+ GT ++APE + A DI+S G+ L G+ P +
Sbjct: 177 NXF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLL--VYEFRRNGSLQDILYDVSQGRRELDWLAR 252
SE+ +++H NIV R++ R L V E+ G L ++ ++ R+ LD
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 253 HRIAQGIASGLEYLHMSHRP--RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
R+ + L+ H ++HRD++PANV +D ++ +FGLA+ + H +
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTS 171
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQ 360
+ GT Y++PE ++ ++ DI+S G LL L P F Q
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G V+ K I + ++I K S + I E+ ++ H NI+ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+V E G L +D R+ RI + + SG+ Y+H + I+H
Sbjct: 92 DSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
RD++P N+L++ D + +I +FGL+ T GT YIAPE +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLL--VYEFRRNGSLQDILYDVSQGRRELDWLAR 252
SE+ +++H NIV R++ R L V E+ G L ++ ++ R+ LD
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 253 HRIAQGIASGLEYLHMSHRP--RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
R+ + L+ H ++HRD++PANV +D ++ +FGLA+ + H +
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTS 171
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQ 360
+ GT Y++PE ++ ++ DI+S G LL L P F Q
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ EKI +G VY A + ++G+ + I+++ + ELI +
Sbjct: 23 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 67
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWS 314
LE+LH + ++IHR+I+ N+L+ D ++++FG +I P+ R+T
Sbjct: 128 -----QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--- 176
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ GT ++APE A DI+S G++ ++ G+ P
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 186 LHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR 245
L K I +EI +++H NIV L + LV + G L D + V +G
Sbjct: 60 LKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI--VEKG-- 115
Query: 246 ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKR 302
+ + I L+ ++ HR I+HRD++P N+L D++ + IS+FGL+K
Sbjct: 116 ---FYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
Query: 303 IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
G +T GT GY+APE S D +S GV+ +L+ G P D
Sbjct: 173 EGKGDVMSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
Q++H+ +V L A +V ++ ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 60 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 116
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ ++ + IHR+++ AN+L+ D + +I++FGLA+ I D + T + +
Sbjct: 117 GMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKW 172
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL +V G+ P
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ EKI +G VY A + ++G+ + I+++ + ELI +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 66
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWS 314
LE+LH + ++IHRDI+ N+L+ D ++++FG +I P+ R+
Sbjct: 127 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS---E 175
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ GT ++APE A DI+S G++ ++ G+ P
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIAQGIASGL 263
H NI+ L LV++ + G L D L + V+ +E + R + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR--------ALL 121
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E + H+ I+HRD++P N+L+DDDM ++++FG + ++ G + GT Y+A
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLA 178
Query: 324 PECHQTVALSDT-------CDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ 369
PE + +++D D++S GV++ L+ G P F H K+M +++
Sbjct: 179 PEIIE-CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLR 226
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ EKI +G VY A + ++G+ + I+++ + ELI +
Sbjct: 23 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 67
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWS 314
LE+LH + ++IHRDI+ N+L+ D ++++FG +I P+ R+
Sbjct: 128 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--- 176
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ GT ++APE A DI+S G++ ++ G+ P
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R EI +RH NI+ + R L+ EF G L Y Q D
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFD--- 113
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A + + LH H ++IHRDI+P N+L+ E +I++FG + P R
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX- 172
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD 356
+ GT+ Y+ PE + + D++ GVL ++G P D
Sbjct: 173 ---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R EI +RH NI+ + R L+ EF G L Y Q D
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFD--- 112
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A + + LH H ++IHRDI+P N+L+ E +I++FG + P R
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX- 171
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD 356
+ GT+ Y+ PE + + D++ GVL ++G P D
Sbjct: 172 ---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ EKI +G VY A + ++G+ + I+++ + ELI +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 66
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWS 314
LE+LH + ++IHRDI+ N+L+ D ++++FG +I P+ R+
Sbjct: 127 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS---X 175
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ GT ++APE A DI+S G++ ++ G+ P
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R EI +RH NI+ + R L+ EF G L Y Q D
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFD--- 112
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
R A + + LH H ++IHRDI+P N+L+ E +I++FG + P R
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX- 171
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSD 356
+ GT+ Y+ PE + + D++ GVL ++G P D
Sbjct: 172 ---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW LAGT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H +V L A +V + +V E+ GSL D L D +GR L +A +A+
Sbjct: 60 KLKHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKD-GEGR-ALKLPNLVDMAAQVAA 116
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R IHRD++ AN+L+ + + +I++FGLA+ I D + T + +
Sbjct: 117 GMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIED-NEXTARQGAKFPIKW 172
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL LV G+ P
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 244 RRELDWLARHRIAQGIASGL-EYLHMSHRPRIIHRDIQPANVLI--DDDMEARISEFGLA 300
R LD++ R ++ I + LH H I HRDI+P N L + E ++ +FGL+
Sbjct: 158 RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Query: 301 K---RIPDGHTRTTTWSLAGTVGYIAPECHQTV--ALSDTCDIYSFGVLLAVLVIGKFPS 355
K ++ +G T + AGT ++APE T + CD +S GVLL +L++G P
Sbjct: 218 KEFYKLNNGEYYGMT-TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP- 275
Query: 356 DDFFQHTKEMSLVQWMRNVMTSENPNRAINSKL 388
F ++ Q + + ENPN + S L
Sbjct: 276 --FPGVNDADTISQVLNKKLCFENPNYNVLSPL 306
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
+++H N+V LL +V E+ G+L D L + + R E+ + +A I+S
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQISS 141
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
+EYL + IHRD+ N L+ ++ ++++FGL+ R+ G T T + +
Sbjct: 142 AMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIKW 197
Query: 322 IAPECHQTVALSDTCDIYSFGVLL---AVLVIGKFPSDDFFQ 360
APE S D+++FGVLL A + +P D Q
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+VYK L G + T I+ LK AE PL + R E + +++H N
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAE------GPLRE---EFRHEAMLRARLQHPN 73
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ----GRRELDWLAR---------HR 254
+V LL + + +++ + +G L + L S G + D + H
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+AQ IA+G+EYL H ++H+D+ NVL+ D + +IS+ GL + + +
Sbjct: 134 VAQ-IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRN 373
+ ++APE S DI+S+GV+L V G P + +V+ +RN
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP----YCGYSNQDVVEMIRN 245
Query: 374 VMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCML 425
P+ + L I C+ P++RP KD+ L
Sbjct: 246 RQVLPCPDDC-----------PAWVYALMIECWNEF--PSRRPRFKDIHSRL 284
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 142/341 (41%), Gaps = 66/341 (19%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITI 165
G DR P F +E L FL++ + F S+E R L ++G V+ +
Sbjct: 4 GAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAV 51
Query: 166 KKIIQPLKSGAELIKKDSEPL----HHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCD 221
KK+ + +++ E L H +++ + +AG+ RN+
Sbjct: 52 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---RNLK------------ 96
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
L+ E+ GSL+D L + + +D + + I G+EYL R IHRD+
Sbjct: 97 -LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLAT 149
Query: 282 ANVLIDDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYS 340
N+L++++ +I +FGL K +P D + + APE S D++S
Sbjct: 150 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWS 209
Query: 341 FGVLLAVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKL 388
FGV+L L K P +F + L++ ++N P
Sbjct: 210 FGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP-------- 261
Query: 389 LGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+G +++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 262 --DGCPDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIAQGIASGL 263
H NI+ L LV++ + G L D L + V+ +E + R + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR--------ALL 134
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
E + H+ I+HRD++P N+L+DDDM ++++FG + ++ G + GT Y+A
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLA 191
Query: 324 PECHQTVALSDT-------CDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ 369
PE + +++D D++S GV++ L+ G P F H K+M +++
Sbjct: 192 PEIIE-CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLR 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+VYK L G + T I+ LK AE PL + R E + +++H N
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAE------GPLRE---EFRHEAMLRARLQHPN 90
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ----GRRELDWLAR---------HR 254
+V LL + + +++ + +G L + L S G + D + H
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+AQ IA+G+EYL H ++H+D+ NVL+ D + +IS+ GL + + +
Sbjct: 151 VAQ-IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRN 373
+ ++APE S DI+S+GV+L V G P + +V+ +RN
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY----SNQDVVEMIRN 262
Query: 374 VMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCML 425
P+ + L I C+ P++RP KD+ L
Sbjct: 263 RQVLPCPDDC-----------PAWVYALMIECWNEF--PSRRPRFKDIHSRL 301
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
V EF G D+++ + + RR + AR A+ I S L +LH II+RD++
Sbjct: 100 FFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAE-IISALMFLH---DKGIIYRDLKL 152
Query: 282 ANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYS 340
NVL+D + ++++FG+ K I +G TT + GT YIAPE Q + D ++
Sbjct: 153 DNVLLDHEGHCKLADFGMCKEGICNG---VTTATFCGTPDYIAPEILQEMLYGPAVDWWA 209
Query: 341 FGVLLAVLVIGKFP-----SDDFFQH--TKEMSLVQWMRNVMT-------SENPNRAINS 386
GVLL ++ G P DD F+ E+ W+ T ++NP + S
Sbjct: 210 MGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGS 269
Query: 387 KLLGNGYEEQML 398
L G E +L
Sbjct: 270 --LTQGGEHAIL 279
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 64/340 (18%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITI 165
G DR P F +E L FL++ + F S+E R L ++G V+ +
Sbjct: 2 GAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAV 49
Query: 166 KKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDL 222
KK L+ E +D E EI ++H NIV + RR+ L
Sbjct: 50 KK----LQHSTEEHLRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKL 95
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
++ E+ GSL+D L + + +D + + I G+EYL R IHRD+
Sbjct: 96 IM-EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATR 148
Query: 283 NVLIDDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
N+L++++ +I +FGL K +P D + + APE S D++SF
Sbjct: 149 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 208
Query: 342 GVLLAVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLL 389
GV+L L K P +F + L++ ++N P
Sbjct: 209 GVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP--------- 259
Query: 390 GNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+G +++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 260 -DGCPDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 182
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW+L GT Y+APE + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGATWTLCGTPEYLAPEIILSKGYN 237
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 238 KAVDWWALGVLIYEMAAGYPP 258
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM- 215
G+ G V + L +LI + +P IR++II QV H P +
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 73
Query: 216 --VRRDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 74 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 128
Query: 273 RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
I+HRD++P+N+L++ E ++ +FG++ ++ D GT Y++PE Q
Sbjct: 129 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSPERLQGTHY 183
Query: 333 SDTCDIYSFGVLLAVLVIGKFP 354
S DI+S G+ L + +G++P
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 24/186 (12%)
Query: 179 IKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY 238
I K +P + R+E+ + RH NI+ + M + D +V ++ SL L+
Sbjct: 65 ILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLH 123
Query: 239 DVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 298
V + + ++ L IA+ A G++YLH + IIHRD++ N+ + + + +I +FG
Sbjct: 124 -VQETKFQMFQLID--IARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFG 177
Query: 299 LAKRIPDGHTRTTTWSLA-------GTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVL 348
LA T + WS + G+V ++APE S D+YS+G++L L
Sbjct: 178 LA-------TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYEL 230
Query: 349 VIGKFP 354
+ G+ P
Sbjct: 231 MTGELP 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 149 EVYKAELPGSSGRVI--TIKKI-----IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAG 201
E++K GS G+V KK I+ LK L+ D E M++ R + +
Sbjct: 21 ELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC---TMVEKR---VLSL 74
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
H + + ++ V E+ G D++Y + Q + D A I
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGG---DLMYHI-QSCHKFDLSRATFYAAEIIL 130
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
GL++LH I++RD++ N+L+D D +I++FG+ K G +T GT Y
Sbjct: 131 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN--EFCGTPDY 185
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
IAPE + + D +SFGVLL ++IG+ P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G V+ K I + ++I K S + I E+ ++ H NI+ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+V E G L +D R+ RI + + SG+ Y+H + I+H
Sbjct: 92 DSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
RD++P N+L++ D + +I +FGL+ T GT YIAPE +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
GS G V+ K I + ++I K S + I E+ ++ H NI+ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+V E G L +D R+ RI + + SG+ Y+H + I+H
Sbjct: 92 DSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
RD++P N+L++ D + +I +FGL+ T GT YIAPE +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLL--VYEFRRNGSLQDILYDVSQGRRELDWLAR 252
SE+ +++H NIV R++ R L V E+ G L ++ ++ R+ LD
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 253 HRIAQGIASGLEYLHMSHRP--RIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
R+ + L+ H ++HRD++PANV +D ++ +FGLA+ + H
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDED 171
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQ 360
GT Y++PE ++ ++ DI+S G LL L P F Q
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L +A IAS
Sbjct: 235 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 291
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 347
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ S+
Sbjct: 57 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASE 114
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ E+ L IA+ A G++YLH IIHRD++ N+ + +D +I +FGLA
Sbjct: 115 TKFEMKKLID--IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA-- 167
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE + S D+Y+FG++L L+ G+
Sbjct: 168 -----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 353 FP 354
P
Sbjct: 223 LP 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L +A IAS
Sbjct: 235 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 291
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 347
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 25/185 (13%)
Query: 211 LLARMVRRDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------AQG 258
+L+ + DC +V Y F L IL D+ G L++H + A
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I GLE++H +++RD++PAN+L+D+ RIS+ GLA ++ + GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGT 353
Query: 319 VGYIAPECHQT-VALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH-TKEMSLVQWMRNVMT 376
GY+APE Q VA + D +S G +L L+ G P F QH TK+ + M M
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 410
Query: 377 SENPN 381
E P+
Sbjct: 411 VELPD 415
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 25/185 (13%)
Query: 211 LLARMVRRDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------AQG 258
+L+ + DC +V Y F L IL D+ G L++H + A
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I GLE++H +++RD++PAN+L+D+ RIS+ GLA ++ + GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGT 353
Query: 319 VGYIAPECHQT-VALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH-TKEMSLVQWMRNVMT 376
GY+APE Q VA + D +S G +L L+ G P F QH TK+ + M M
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 410
Query: 377 SENPN 381
E P+
Sbjct: 411 VELPD 415
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 60/293 (20%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRH----------- 205
G+ G+V+ + + + I+ E K+ I SE++ + H
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEE----KLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 206 --RNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY--DVSQGRRELDWLARHRIAQGIAS 261
RN V + + ++ + E+ N +L D+++ +++Q R E W R+ + I
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-W----RLFRQILE 127
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI--------------PDGH 307
L Y+H IIHRD++P N+ ID+ +I +FGLAK + P
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 308 TRTTTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMS 366
T S GT Y+A E T ++ D+YS G++ ++ +P F + ++
Sbjct: 185 DNLT--SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YP---FSTGMERVN 236
Query: 367 LVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
+++ +R+V P+ N +M + KI DPNKRP ++
Sbjct: 237 ILKKLRSVSIEFPPDFDDN----------KMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 25/185 (13%)
Query: 211 LLARMVRRDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------AQG 258
+L+ + DC +V Y F L IL D+ G L++H + A
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 299
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I GLE++H +++RD++PAN+L+D+ RIS+ GLA ++ + GT
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGT 352
Query: 319 VGYIAPECHQT-VALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH-TKEMSLVQWMRNVMT 376
GY+APE Q VA + D +S G +L L+ G P F QH TK+ + M M
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 409
Query: 377 SENPN 381
E P+
Sbjct: 410 VELPD 414
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L Y F+ N +L ++ V G R + AR AQ I EYLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 25/185 (13%)
Query: 211 LLARMVRRDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------AQG 258
+L+ + DC +V Y F L IL D+ G L++H + A
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I GLE++H +++RD++PAN+L+D+ RIS+ GLA ++ + GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGT 353
Query: 319 VGYIAPECHQT-VALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH-TKEMSLVQWMRNVMT 376
GY+APE Q VA + D +S G +L L+ G P F QH TK+ + M M
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 410
Query: 377 SENPN 381
E P+
Sbjct: 411 VELPD 415
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L Y F+ N +L ++ V G R + AR AQ I EYLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +++ ++++K+ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RDI+ N+++D D +I++FGL K I DG T T GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGTPEYLAPEVLEDNDYGRA 185
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 186 VDWWGLGVVMYEMMCGRLP 204
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L +A IAS
Sbjct: 62 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 118
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 119 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 174
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L Y F+ N +L ++ V G R + AR AQ I EYLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +++ ++++K+ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RDI+ N+++D D +I++FGL K I DG T T GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGTPEYLAPEVLEDNDYGRA 185
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 186 VDWWGLGVVMYEMMCGRLP 204
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L +A IAS
Sbjct: 59 KLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 115
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D T + +
Sbjct: 116 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKW 171
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
Y++PE + + D+++ G ++ LV G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +++ ++++K+ ++ +E RH + L
Sbjct: 19 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 78
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S LEYLH +++
Sbjct: 79 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 131
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RDI+ N+++D D +I++FGL K I DG T T GT Y+APE +
Sbjct: 132 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGTPEYLAPEVLEDNDYGRA 188
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 189 VDWWGLGVVMYEMMCGRLP 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +K+ +++KK+ ++ +E RH + L
Sbjct: 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 218
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S L+YLH +++
Sbjct: 219 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKN--VVY 272
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RD++ N+++D D +I++FGL K I DG T T GT Y+APE +
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGTPEYLAPEVLEDNDYGRA 329
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 330 VDWWGLGVVMYEMMCGRLP 348
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD--- 156
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 211
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 212 KAVDWWALGVLIYEMAAGYPP 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 148
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID+ ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 203
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 204 KAVDWWALGVLIYEMAAGYPP 224
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +K+ +++KK+ ++ +E RH + L
Sbjct: 162 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 221
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S L+YLH +++
Sbjct: 222 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKN--VVY 275
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RD++ N+++D D +I++FGL K I DG T T GT Y+APE +
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGTPEYLAPEVLEDNDYGRA 332
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 333 VDWWGLGVVMYEMMCGRLP 351
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 30/225 (13%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ LEKI G VYKA+ + G +KKI ++K+ E + I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ--NNYGETFALKKI---------RLEKEDEGIPSTTIR--- 49
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI +++H NIV L + + +LV+E + L+ +L DV +G E A+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLL-DVCEGGLE-SVTAKSFL 106
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTTTW 313
Q + +G+ Y H R++HRD++P N+LI+ + E +I++FGLA+ IP R T
Sbjct: 107 LQ-LLNGIAY---CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYTH 159
Query: 314 SLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T+ Y AP+ + S T DI+S G + A +V G FP
Sbjct: 160 EIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L +A IAS
Sbjct: 235 KLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 291
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 347
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FGLAKR+ +
Sbjct: 143 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KG 193
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD--- 182
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 238 KAVDWWALGVLIYEMAAGYPP 258
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L +A IAS
Sbjct: 318 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 374
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 375 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 430
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 167
G RP + +E + E + + +L + S G V A +G + +KK
Sbjct: 11 GSMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKK 66
Query: 168 IIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDL 222
+ +P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 67 LSKPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 114
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+
Sbjct: 115 YLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPS 166
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSF 341
N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 167 NLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221
Query: 342 GVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 222 GCIMAELLTGRTLFPGTD---HIDQLKLI 247
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 91
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 92 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 142
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW+L GT Y+APE
Sbjct: 143 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPE 194
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 107 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 157
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW+L GT Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPE 209
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 107 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEY 157
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 209
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 30/225 (13%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ LEKI G VYKA+ + G +KKI ++K+ E + I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ--NNYGETFALKKI---------RLEKEDEGIPSTTIR--- 49
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI +++H NIV L + + +LV+E + L+ +L DV +G E A+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLL-DVCEGGLE-SVTAKSFL 106
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTTTW 313
Q + +G+ Y H R++HRD++P N+LI+ + E +I++FGLA+ IP R T
Sbjct: 107 LQ-LLNGIAY---CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYTH 159
Query: 314 SLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T+ Y AP+ + S T DI+S G + A +V G FP
Sbjct: 160 EVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 157 GSSGRVI--TIKKI-----IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV 209
GS G+V KK I+ LK L+ D E M++ R + + H +
Sbjct: 28 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC---TMVEKR---VLSLAWEHPFLT 81
Query: 210 PLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMS 269
+ ++ V E+ G D++Y + Q + D A I GL++LH
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGG---DLMYHI-QSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 270 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT 329
I++RD++ N+L+D D +I++FG+ K G +T + GT YIAPE
Sbjct: 138 ---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF--CGTPDYIAPEILLG 192
Query: 330 VALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D +SFGVLL ++IG+ P
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 40/268 (14%)
Query: 109 GSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKI 168
G RP + +E + E + + +L + S G V A +G + +KK+
Sbjct: 11 GMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKL 66
Query: 169 IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLL 223
+P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 67 SRPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 114
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N
Sbjct: 115 LVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSN 166
Query: 284 VLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFG 342
+ +++D E +I +FGLA+ HT T Y APE + + T DI+S G
Sbjct: 167 LAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 343 VLLAVLVIGK--FPSDDFFQHTKEMSLV 368
++A L+ G+ FP D H ++ L+
Sbjct: 222 CIMAELLTGRTLFPGTD---HIDQLKLI 246
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 69 KIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 106 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEY 156
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 30/225 (13%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ LEKI G VYKA+ + G +KKI ++K+ E + I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ--NNYGETFALKKI---------RLEKEDEGIPSTTIR--- 49
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI +++H NIV L + + +LV+E + L+ +L DV +G E A+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLL-DVCEGGLE-SVTAKSFL 106
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTTTW 313
Q + +G+ Y H R++HRD++P N+LI+ + E +I++FGLA+ IP R T
Sbjct: 107 LQ-LLNGIAY---CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYTH 159
Query: 314 SLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T+ Y AP+ + S T DI+S G + A +V G FP
Sbjct: 160 EVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPG 203
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V+ G R + AR AQ I EY
Sbjct: 106 --------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 156
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 106 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEY 156
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 167
G RP + +E + E + + +L + S G V A +G + +KK
Sbjct: 1 GSMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKK 56
Query: 168 IIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDL 222
+ +P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 57 LSRPFQSI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 104
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+
Sbjct: 105 YLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPS 156
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSF 341
N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 157 NLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
Query: 342 GVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 212 GCIMAELLTGRTLFPGTD---HIDQLKLI 237
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 99
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 100 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 151
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 152 -----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
Query: 353 FPSDD 357
P +
Sbjct: 207 LPYSN 211
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 167
G RP + +E + E + + +L + S G V A +G + +KK
Sbjct: 11 GSMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKK 66
Query: 168 IIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDL 222
+ +P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 67 LSRPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 114
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+
Sbjct: 115 YLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPS 166
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSF 341
N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 167 NLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221
Query: 342 GVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 222 GCIMAELLTGRTLFPGTD---HIDQLKLI 247
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 167
G RP + +E + E + + +L + S G V A +G + +KK
Sbjct: 1 GSHSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKK 56
Query: 168 IIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDL 222
+ +P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 57 LSRPFQSI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 104
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+
Sbjct: 105 YLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPS 156
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSF 341
N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 157 NLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
Query: 342 GVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 212 GCIMAELLTGRTLFPGTD---HIDQLKLI 237
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 140 EKIR-SCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEII 198
EKIR C+ E+ + G G+V ++K+ +GA K + + K + +R+
Sbjct: 12 EKIRPECF--ELLRVLGKGGYGKVFQVRKV-----TGANTGKIFAMKVLKKAMIVRNAKD 64
Query: 199 TAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR------RE---LDW 249
TA RNI+ + D L+Y F+ G L IL +S G RE ++
Sbjct: 65 TAHTKAERNILEEVKHPFIVD---LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR-IPDGHT 308
A +A+ I+ L +LH II+RD++P N++++ ++++FGL K I DG
Sbjct: 122 TACFYLAE-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-- 175
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
T T + GT+ Y+APE + D +S G L+ ++ G P
Sbjct: 176 -TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 167
G RP + +E + E + + +L + S G V A +G + +KK
Sbjct: 11 GSMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKK 66
Query: 168 IIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDL 222
+ +P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 67 LSRPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 114
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+
Sbjct: 115 YLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPS 166
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSF 341
N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 167 NLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221
Query: 342 GVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 222 GCIMAELLTGRTLFPGTD---HIDQLKLI 247
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIA 260
+++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEAD--ASHCIQQI-- 137
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTW-SLA 316
LE + H I+HR+++P N+L+ + ++++FGLA + D + W A
Sbjct: 138 --LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND----SEAWHGFA 191
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GT GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 69 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 127
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 128 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 179
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 180 -----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
Query: 353 FP 354
P
Sbjct: 235 LP 236
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 106 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 156
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 40/268 (14%)
Query: 109 GSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKI 168
G RP + +E + E + + +L + S G V A +G + +KK+
Sbjct: 11 GMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKL 66
Query: 169 IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLL 223
+P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 67 SRPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 114
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N
Sbjct: 115 LVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSN 166
Query: 284 VLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFG 342
+ +++D E +I +FGLA+ HT T Y APE + + T DI+S G
Sbjct: 167 LAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 343 VLLAVLVIGK--FPSDDFFQHTKEMSLV 368
++A L+ G+ FP D H ++ L+
Sbjct: 222 CIMAELLTGRTLFPGTD---HIDQLKLI 246
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 28/181 (15%)
Query: 220 CDLLVYEFRRNGSLQDILYDVSQGRR--ELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
C + EF G+L+ + + RR +LD + + + I G++Y+H ++IHR
Sbjct: 108 CLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHR 160
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
D++P+N+ + D + +I +FGL + + RT + GT+ Y++PE + D
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEVD 217
Query: 338 IYSFGVLLAVLV--------IGKFPSD-------DFFQHTKEMSLVQWMRNVMTSENPNR 382
+Y+ G++LA L+ KF +D D F KE +L+Q + + + PN
Sbjct: 218 LYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK-KEKTLLQKLLSKKPEDRPNT 276
Query: 383 A 383
+
Sbjct: 277 S 277
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYQMAAGYPP 237
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 64/336 (19%)
Query: 112 DRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKII 169
DR P F +E L FL++ + F S+E R L ++G V+ +KK
Sbjct: 5 DRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK-- 50
Query: 170 QPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYE 226
L+ E +D E EI ++H NIV + RR+ L++ E
Sbjct: 51 --LQHSTEEHLRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-E 97
Query: 227 FRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI 286
+ GSL+D L + + +D + + I G+EYL R IHRD+ N+L+
Sbjct: 98 YLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILV 151
Query: 287 DDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+++ +I +FGL K +P D + + APE S D++SFGV+L
Sbjct: 152 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 211
Query: 346 AVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGY 393
L K P +F + L++ ++N P +G
Sbjct: 212 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGC 261
Query: 394 EEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 262 PDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 162
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPP 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 143 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KG 193
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 143 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KG 193
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLXGTPEYLAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FGLAKR+ +
Sbjct: 143 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KG 193
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 19/222 (8%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI Q+ H N++ A + + +V E G L ++ + +R + +
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ S LE++H R++HRDI+PANV I ++ + GL + T SL
Sbjct: 142 FVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSL 196
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVM 375
GT Y++PE + DI+S G LL + + P + +M+L + +
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF-----YGDKMNLYSLCKKIE 251
Query: 376 TSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPN 417
+ P L + Y E++ ++ + C DP KRP+
Sbjct: 252 QCDYP------PLPSDHYSEELRQLVNM---CINPDPEKRPD 284
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIA 260
+++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEAD--ASHCIQQI-- 114
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTW-SLA 316
LE + H I+HR+++P N+L+ + ++++FGLA + D + W A
Sbjct: 115 --LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND----SEAWHGFA 168
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GT GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 167
G RP + +E + E + + +L + S G V A +G + +KK
Sbjct: 1 GSMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKK 56
Query: 168 IIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDL 222
+ +P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 57 LSRPFQSI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 104
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+
Sbjct: 105 YLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPS 156
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSF 341
N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 157 NLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
Query: 342 GVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 212 GCIMAELLTGRTLFPGTD---HIDQLKLI 237
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 1 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 56
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 57 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 105 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 156
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 157 DCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 212 LLTGRTLFPGTD---HIDQLKLI 231
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ S+
Sbjct: 45 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASE 102
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ E+ L IA+ A G++YLH IIHRD++ N+ + +D +I +FGLA
Sbjct: 103 TKFEMKKLID--IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA-- 155
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE + S D+Y+FG++L L+ G+
Sbjct: 156 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
Query: 353 FP 354
P
Sbjct: 211 LP 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 61 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 119
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 120 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 171
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 172 -----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
Query: 353 FP 354
P
Sbjct: 227 LP 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 64/336 (19%)
Query: 112 DRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKII 169
DR P F +E L FL++ + F S+E R L ++G V+ +KK
Sbjct: 7 DRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK-- 52
Query: 170 QPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYE 226
L+ E +D E EI ++H NIV + RR+ L++ E
Sbjct: 53 --LQHSTEEHLRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-E 99
Query: 227 FRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI 286
+ GSL+D L + + +D + + I G+EYL R IHRD+ N+L+
Sbjct: 100 YLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILV 153
Query: 287 DDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+++ +I +FGL K +P D + + APE S D++SFGV+L
Sbjct: 154 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 213
Query: 346 AVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGY 393
L K P +F + L++ ++N P +G
Sbjct: 214 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGC 263
Query: 394 EEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 264 PDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V G R + AR AQ I EYLH
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD--- 154
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 210 KAVDWWALGVLIYEMAAGYPP 230
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L ++ IAS
Sbjct: 66 KLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIAS 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 107 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 157
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 209
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + +V ++ SL L+ S+
Sbjct: 57 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLH-ASE 114
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ E+ L IA+ A G++YLH IIHRD++ N+ + +D +I +FGLA
Sbjct: 115 TKFEMKKLID--IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA-- 167
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE + S D+Y+FG++L L+ G+
Sbjct: 168 -----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 353 FP 354
P
Sbjct: 223 LP 224
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 106 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 156
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L I S G V A +G + +KK+ +P +
Sbjct: 10 RPTFYR---QELNKTIWEVPERYQNLSPIGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 65
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 66 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 114 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 165
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 166 DXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 221 LLTGRTLFPGTD---HIDQLKLI 240
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 106 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 156
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH-QTVALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 136 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KG 186
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 187 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV--PLLAR 214
GS GRV+ +K + +++ K K+++++ T + R V P L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDK------QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 215 MVRRDCDLLVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEY 265
L + F+ N +L ++ V G R + AR AQ I EY
Sbjct: 106 --------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEY 156
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
LH +I+RD++P N+LID ++++FG AKR+ + TW L GT Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 108 GGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 167
G RP + +E + E + + +L + S G V A +G + +KK
Sbjct: 1 GPMSQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKK 56
Query: 168 IIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDL 222
+ +P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 57 LSRPFQSI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 104
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+
Sbjct: 105 YLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPS 156
Query: 283 NVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSF 341
N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 157 NLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
Query: 342 GVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 212 GCIMAELLTGRTLFPGTD---HIDQLKLI 237
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 40/270 (14%)
Query: 107 RGGSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIK 166
+ + RP + +E + E + + +L + S G V A +G + +K
Sbjct: 21 QSNASQERPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVK 76
Query: 167 KIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCD 221
K+ +P +S +H K + E+ ++H N++ LL AR + D
Sbjct: 77 KLSRPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 124
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
+ + L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P
Sbjct: 125 VYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKP 176
Query: 282 ANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYS 340
+N+ +++D E +I +FGLA+ HT T Y APE + + T DI+S
Sbjct: 177 SNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 341 FGVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
G ++A L+ G+ FP D H ++ L+
Sbjct: 232 VGCIMAELLTGRTLFPGTD---HIDQLKLI 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L + L L ++ IAS
Sbjct: 66 KLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIAS 122
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEWTARQGAKFPIKW 178
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 25 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 80
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 81 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 128
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 129 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 180
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 181 DCELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 235
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 236 LLTGRTLFPGTD---HIDQLKLI 255
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIA 260
+++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEAD--ASHCIQQI-- 114
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTW-SLA 316
LE + H I+HR+++P N+L+ + ++++FGLA + D + W A
Sbjct: 115 --LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND----SEAWHGFA 168
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GT GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +++ ++++K+ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RDI+ N+++D D +I++FGL K I DG T GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 186 VDWWGLGVVMYEMMCGRLP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 60 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 116
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 117 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 172
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FG AKR+ +
Sbjct: 143 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KG 193
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FG AKR+ +
Sbjct: 143 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KG 193
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 25 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 80
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 81 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 128
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 129 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 180
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 181 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 235
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 236 LLTGRTLFPGTD---HIDQLKLI 255
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIA 260
+++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEAD--ASHCIQQI-- 113
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTW-SLA 316
LE + H I+HR+++P N+L+ + ++++FGLA + D + W A
Sbjct: 114 --LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND----SEAWHGFA 167
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GT GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 27/268 (10%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G V +++ L+ + I KD + M QI +EI + H NI+ +
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDRSQV--PMEQIEAEIEVLKSLDHPNIIKIFEVFE 90
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+V E G L + + + L + + + + L Y H H ++H
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVH 147
Query: 277 RDIQPANVLIDDD---MEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+D++P N+L D +I +FGLA+ T AGT Y+APE + ++
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALYMAPEVFKR-DVT 203
Query: 334 DTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGY 393
CDI+S GV++ L+ G P F T ++ ++ T + PN A+ + L
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLP----FTGTS----LEEVQQKATYKEPNYAVECRPLT--- 252
Query: 394 EEQMLLVLKIACFCTLDDPNKRPNSKDV 421
Q + +LK DP +RP++ V
Sbjct: 253 -PQAVDLLKQML---TKDPERRPSAAQV 276
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FG AKR+ +
Sbjct: 144 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KG 194
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 1 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 56
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 57 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 105 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 156
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 157 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 212 LLTGRTLFPGTD---HIDQLKLI 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 24 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 79
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 80 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 127
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 128 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 179
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 180 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 234
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 235 LLTGRTLFPGTD---HIDQLKLI 254
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N+LID ++++FG AKR+ +
Sbjct: 164 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KG 214
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 215 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMI---QIRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + +I E+ QV H N++ L
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
R +L+ E G L D L +Q + A I Q I G+ YLH
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQ-ILDGVNYLHTK--- 134
Query: 273 RIIHRDIQPANVLIDDDM----EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D ++ +FGLA I DG ++ GT ++APE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVN 191
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFP--------------------SDDFFQHTKEMSLV 368
L D++S GV+ +L+ G P ++FF HT E++
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA-K 250
Query: 369 QWMRNVMTSENPNR 382
++R ++ E R
Sbjct: 251 DFIRKLLVKETRKR 264
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCD--LLVYEFRRNGSLQDI--LYDVSQGRREL 247
Q+ EI ++ H N+V L+ + + D +V+E G + ++ L +S+ +
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARF 141
Query: 248 DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGH 307
+ Q + G+EYLH +IIHRDI+P+N+L+ +D +I++FG++
Sbjct: 142 YF-------QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 308 TRTTTWSLAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+ + GT ++APE + + D+++ GV L V G+ P D
Sbjct: 192 ALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIA 260
GQ H N+V L + R ++V EF NG+L D G+ + L + +GIA
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVG--MLRGIA 155
Query: 261 SGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLAGT 318
+G+ YL M + +HRD+ N+L++ ++ ++S+FGL++ I D TT
Sbjct: 156 AGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDD 357
V + APE Q + D++S+G+++ V+ G+ P D
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 28/226 (12%)
Query: 140 EKIR-SCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEII 198
EKIR C+ E+ + G G+V ++K+ +GA K + + K + +R+
Sbjct: 12 EKIRPECF--ELLRVLGKGGYGKVFQVRKV-----TGANTGKIFAMKVLKKAMIVRNAKD 64
Query: 199 TAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR------RE---LDW 249
TA RNI+ + D L+Y F+ G L IL +S G RE ++
Sbjct: 65 TAHTKAERNILEEVKHPFIVD---LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR-IPDGHT 308
A +A+ I+ L +LH II+RD++P N++++ ++++FGL K I DG
Sbjct: 122 TACFYLAE-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-- 175
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
T T GT+ Y+APE + D +S G L+ ++ G P
Sbjct: 176 -TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 58 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 114
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 115 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 170
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMI---QIRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + +I E+ QV H N++ L
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
R +L+ E G L D L +Q + A I Q I G+ YLH
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQ-ILDGVNYLHTK--- 134
Query: 273 RIIHRDIQPANVLIDDDM----EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D ++ +FGLA I DG ++ GT ++APE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVN 191
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFP--------------------SDDFFQHTKEMSLV 368
L D++S GV+ +L+ G P ++FF HT E++
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA-K 250
Query: 369 QWMRNVMTSENPNR 382
++R ++ E R
Sbjct: 251 DFIRKLLVKETRKR 264
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KXQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +++ ++++K+ ++ +E RH + L
Sbjct: 21 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 80
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S LEYLH +++
Sbjct: 81 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 133
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RDI+ N+++D D +I++FGL K I DG T GT Y+APE +
Sbjct: 134 RDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 191 VDWWGLGVVMYEMMCGRLP 209
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 11 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 66
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 67 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 114
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 115 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 166
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 167 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 222 LLTGRTLFPGTD---HIDQLKLI 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 46 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHII-- 102
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 103 -ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 156
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 157 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
Query: 353 FP 354
P
Sbjct: 212 LP 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMI---QIRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + +I E+ QV H N++ L
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
R +L+ E G L D L +Q + A I Q I G+ YLH
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQ-ILDGVNYLHTK--- 134
Query: 273 RIIHRDIQPANVLIDDDM----EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D ++ +FGLA I DG ++ GT ++APE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVN 191
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFP--------------------SDDFFQHTKEMSLV 368
L D++S GV+ +L+ G P ++FF HT E++
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA-K 250
Query: 369 QWMRNVMTSENPNR 382
++R ++ E R
Sbjct: 251 DFIRKLLVKETRKR 264
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 68 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 126
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 127 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 178
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 179 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
Query: 353 FP 354
P
Sbjct: 234 LP 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 15 RPTFYR---QELNKTIWEVPERYQNLAPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 70
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 71 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 118
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 119 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 170
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 171 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 225
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 226 LLTGRTLFPGTD---HIDQLKLI 245
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD+ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ RV T +I + ++I+K +P H + R + HRN++ L+
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEK--QPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE 81
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D LV+E R GS+ ++ RR + L + Q +AS L++LH I H
Sbjct: 82 EEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLH---NKGIAH 134
Query: 277 RDIQPANVLIDDDME---ARISEFGLAKRIP---DGHTRTTTWSL--AGTVGYIAPECHQ 328
RD++P N+L + + +I +FGL I D +T L G+ Y+APE +
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 329 TVALSDT-----CDIYSFGVLLAVLVIGKFP 354
+ + CD++S GV+L +L+ G P
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 41/268 (15%)
Query: 109 GSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKI 168
GS++R P + +E + E + + +L + S G V A +G + +KK+
Sbjct: 1 GSQER-PTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKL 55
Query: 169 IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLL 223
+P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 56 SRPFQSI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N
Sbjct: 104 LVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSN 155
Query: 284 VLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFG 342
+ +++D E +I +FGLA+ HT T Y APE + + T DI+S G
Sbjct: 156 LAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 343 VLLAVLVIGK--FPSDDFFQHTKEMSLV 368
++A L+ G+ FP D H ++ L+
Sbjct: 211 CIMAELLTGRTLFPGTD---HIDQLKLI 235
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 10 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 65
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 66 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 114 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 165
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 166 DXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 221 LLTGRTLFPGTD---HIDQLKLI 240
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 43 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 101
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 102 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 153
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 154 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
Query: 353 FPSDD 357
P +
Sbjct: 209 LPYSN 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 69 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 127
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 128 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 179
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 180 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
Query: 353 FP 354
P
Sbjct: 235 LP 236
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + + V ++ SL L+ +
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIET 99
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 100 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 151
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 152 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
Query: 353 FPSDD 357
P +
Sbjct: 207 LPYSN 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
+ P ++ ++E+ + RH NI+ + + +V ++ SL L+ +
Sbjct: 46 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 104
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
+ + + IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 105 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 156
Query: 303 IPDGHTRTTTWS-------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGK 352
T + WS L+G++ ++APE S D+Y+FG++L L+ G+
Sbjct: 157 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
Query: 353 FPSDD 357
P +
Sbjct: 212 LPYSN 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +++ ++++K+ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RDI+ N+++D D +I++FGL K I DG T GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 186 VDWWGLGVVMYEMMCGRLP 204
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
GL+Y+H + IIHRD++P+NV +++D E RI +FGLA++ + T T Y
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----GYVATRWY 186
Query: 322 IAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFFQHTKEM 365
APE + + T DI+S G ++A L+ GK FP D+ K +
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELD 248
IQI ++ V R + L ++ D LL E+ G L+ L ++ G +E
Sbjct: 63 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG- 121
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPD 305
+ I+S L YLH + RIIHRD++P N+++ + +I + G AK +
Sbjct: 122 --PIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
G T GT+ Y+APE + + T D +SFG L + G P +Q
Sbjct: 177 GELCT---EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP---- 229
Query: 366 SLVQWMRNVMTSENPNRAINSKLLG 390
VQW V N + + L G
Sbjct: 230 --VQWHGKVREKSNEHIVVYDDLTG 252
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KXQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +++ ++++K+ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RDI+ N+++D D +I++FGL K I DG T GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 186 VDWWGLGVVMYEMMCGRLP 204
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGLA+ + D TT
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
GL+Y+H + IIHRD++P+NV +++D E RI +FGLA++ + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWY 194
Query: 322 IAPECHQT-VALSDTCDIYSFGVLLAVLVIGK--FPSDDFFQHTKEM 365
APE + + T DI+S G ++A L+ GK FP D+ K +
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 12 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 67
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 68 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 116 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 167
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 168 DCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 223 LLTGRTLFPGTD---HIDQLKLI 242
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 12 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 67
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 68 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 116 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 167
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 168 DCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 223 LLTGRTLFPGTD---HIDQLKLI 242
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 12 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 67
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 68 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 116 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 167
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 168 DCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 223 LLTGRTLFPGTD---HIDQLKLI 242
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 36/239 (15%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-YDVSQG- 243
++ R+ E++ V H+NI+ LL + + EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVI 119
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-- 174
Query: 304 PDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
T T++ + V Y APE + + DI+S GV++ ++ G FP D
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
AR AQ I EYLH +I+RD++P N++ID ++++FG AKR+ +
Sbjct: 143 ARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KG 193
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TW L GT Y+APE + + D ++ GVL+ + G P
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 12 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 67
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 68 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 116 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 167
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 168 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 223 LLTGRTLFPGTD---HIDQLKLI 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELD 248
IQI ++ V R + L ++ D LL E+ G L+ L ++ G +E
Sbjct: 64 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG- 122
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPD 305
+ I+S L YLH + RIIHRD++P N+++ + +I + G AK +
Sbjct: 123 --PIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
G T GT+ Y+APE + + T D +SFG L + G P +Q
Sbjct: 178 GELCT---EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP---- 230
Query: 366 SLVQWMRNVMTSENPNRAINSKLLG 390
VQW V N + + L G
Sbjct: 231 --VQWHGKVREKSNEHIVVYDDLTG 253
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 2 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 57
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 58 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 105
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 106 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 157
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 158 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 212
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 213 LLTGRTLFPGTD---HIDQLKLI 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 11 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 66
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 67 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 114
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 115 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 166
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 167 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 222 LLTGRTLFPGTD---HIDQLKLI 241
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 188
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 189 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+ +TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 246 YYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
Query: 360 QHTKE 364
+ KE
Sbjct: 304 KLLKE 308
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
GL+Y+H + IIHRD++P+NV +++D E RI +FGLA++ + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWY 194
Query: 322 IAPECHQT-VALSDTCDIYSFGVLLAVLVIGK--FPSDDFFQHTKEM 365
APE + + T DI+S G ++A L+ GK FP D+ K +
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 10 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 65
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 66 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 114 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 165
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 166 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 221 LLTGRTLFPGTD---HIDQLKLI 240
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N++ID ++++FG AKR+ + TW L GT Y+APE + +
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIISKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 3 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 58
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 59 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 106
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 107 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 158
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 159 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 214 LLTGRTLFPGTD---HIDQLKLI 233
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 24 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 79
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 80 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 127
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 128 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 179
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 180 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 234
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 235 LLTGRTLFPGTD---HIDQLKLI 254
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 36/239 (15%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-YDVSQG- 243
++ R+ E++ V H+NI+ LL + + EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVI 119
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-- 174
Query: 304 PDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
T T++ + V Y APE + + DI+S GV++ ++ G FP D
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 11 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 66
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 67 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 114
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 115 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 166
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 167 DSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 222 LLTGRTLFPGTD---HIDQLKLI 241
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 25 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 80
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 81 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 128
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 129 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 180
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 181 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 235
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 236 LLTGRTLFPGTD---HIDQLKLI 255
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 28 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 83
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 84 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 131
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 132 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 183
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 184 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 238
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 239 LLTGRTLFPGTD---HIDQLKLI 258
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 10 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 65
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 66 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 114 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 165
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 166 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 221 LLTGRTLFPGTD---HIDQLKLI 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 4 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 59
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 60 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 107
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 108 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 159
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 160 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 214
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 215 LLTGRTLFPGTD---HIDQLKLI 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 254
SE GQ H NI+ L + + +++ E+ NGSL D + GR + L
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVG-- 120
Query: 255 IAQGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTT 312
+ +GI SG++YL MS+ +HRD+ N+L++ ++ ++S+FG+++ + D TT
Sbjct: 121 MLRGIGSGMKYLSDMSY----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 313 WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDF 358
+ + APE + D++S+G+++ V+ G+ P D
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 1 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 56
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 57 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 105 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 156
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 157 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 212 LLTGRTLFPGTD---HIDQLKLI 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 184 EPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQG 243
E L K + +EI +++H NIV L L+ + G L D + V +G
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKG 111
Query: 244 -RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGL 299
E D R+ + ++YLH I+HRD++P N+L +D+D + IS+FGL
Sbjct: 112 FYTERD---ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 300 AKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+K G +T GT GY+APE S D +S GV+ +L+ G P D
Sbjct: 166 SKMEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 254
SE GQ H NI+ L + + +++ E+ NGSL D + GR + L
Sbjct: 58 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVG-- 114
Query: 255 IAQGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTT 312
+ +GI SG++YL MS+ +HRD+ N+L++ ++ ++S+FG+++ + D TT
Sbjct: 115 MLRGIGSGMKYLSDMSY----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 313 WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDF 358
+ + APE + D++S+G+++ V+ G+ P D
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 120 PLIKEEDLA--FLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE 177
P ++LA E + + +L + S G V A +G + +KK+ +P +S
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSI-- 58
Query: 178 LIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFRRNGS 232
+H K + E+ ++H N++ LL AR + D+ +
Sbjct: 59 --------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 108
Query: 233 LQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA 292
L +I+ + +L I Q I GL+Y+H + IIHRD++P+N+ +++D E
Sbjct: 109 LNNIVKCAKLTDDHVQFL----IYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 160
Query: 293 RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAVLVIG 351
+I +FGLA+ HT T Y APE + + T DI+S G ++A L+ G
Sbjct: 161 KILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 352 K--FPSDDFFQHTKEMSLV 368
+ FP D H ++ L+
Sbjct: 216 RTLFPGTD---HIDQLKLI 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 2 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 57
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 58 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 105
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 106 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 157
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 158 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 212
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 213 LLTGRTLFPGTD---HIDQLKLI 232
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 64/336 (19%)
Query: 112 DRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKII 169
DR P F +E L FL + + F S+E R L ++G V+ +KK
Sbjct: 4 DRDPTQF----EERHLKFLRQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK-- 49
Query: 170 QPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYE 226
L+ E +D E EI ++H NIV + RR+ L++ E
Sbjct: 50 --LQHSTEEHLRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-E 96
Query: 227 FRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI 286
F GSL++ L + + +D + + I G+EYL R IHRD+ N+L+
Sbjct: 97 FLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILV 150
Query: 287 DDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+++ +I +FGL K +P D + + APE S D++SFGV+L
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 346 AVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGY 393
L K P +F + L++ ++N P +G
Sbjct: 211 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGC 260
Query: 394 EEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 261 PDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 139
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 140 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+ +TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 197 YYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
Query: 360 QHTKE 364
+ KE
Sbjct: 255 KLLKE 259
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 147
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+ +TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 205 YYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 360 QHTKE 364
+ KE
Sbjct: 263 KLLKE 267
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 136
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 137 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+ +TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 194 YYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
Query: 360 QHTKE 364
+ KE
Sbjct: 252 KLLKE 256
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 140
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 141 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+ +TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 198 YYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
Query: 360 QHTKE 364
+ KE
Sbjct: 256 KLLKE 260
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +K+ +++KK+ ++ +E RH + L
Sbjct: 19 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 78
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S L+YLH +++
Sbjct: 79 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 132
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RD++ N+++D D +I++FGL K I DG T GT Y+APE +
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 190 VDWWGLGVVMYEMMCGRLP 208
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 60/326 (18%)
Query: 122 IKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELI 179
+E L FL++ + F S+E R L ++G V+ +KK L+ E
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK----LQHSTEEH 54
Query: 180 KKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYEFRRNGSLQDI 236
+D E EI ++H NIV + RR+ L++ E+ GSL+D
Sbjct: 55 LRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDY 103
Query: 237 LYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 296
L + + +D + + I G+EYL R IHRD+ N+L++++ +I +
Sbjct: 104 L---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157
Query: 297 FGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI----G 351
FGL K +P D + + APE S D++SFGV+L L
Sbjct: 158 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
Query: 352 KFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKI 403
K P +F + L++ ++N P +G +++ +++
Sbjct: 218 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGCPDEIYMIM-- 265
Query: 404 ACFCTLDDPNKRPNSKDVRCMLSQIQ 429
C ++ N+RP+ +D+ + QI+
Sbjct: 266 -TECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 184 EPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQG 243
E L K + +EI +++H NIV L L+ + G L D + V +G
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKG 111
Query: 244 -RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGL 299
E D R+ + ++YLH I+HRD++P N+L +D+D + IS+FGL
Sbjct: 112 FYTERD---ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 300 AKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
+K G +T GT GY+APE S D +S GV+ +L+ G P D
Sbjct: 166 SKMEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 60/326 (18%)
Query: 122 IKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELI 179
+E L FL++ + F S+E R L ++G V+ +KK L+ E
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK----LQHSTEEH 54
Query: 180 KKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYEFRRNGSLQDI 236
+D E EI ++H NIV + RR+ L++ E+ GSL+D
Sbjct: 55 LRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDY 103
Query: 237 LYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 296
L + + +D + + I G+EYL R IHRD+ N+L++++ +I +
Sbjct: 104 L---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157
Query: 297 FGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI----G 351
FGL K +P D + + APE S D++SFGV+L L
Sbjct: 158 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
Query: 352 KFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKI 403
K P +F + L++ ++N P +G +++ +++
Sbjct: 218 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGCPDEIYMIM-- 265
Query: 404 ACFCTLDDPNKRPNSKDVRCMLSQIQ 429
C ++ N+RP+ +D+ + QI+
Sbjct: 266 -TECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR--------- 254
+H+NI+ LL + ++ E+ G+L++ L E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 255 ---IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D + +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVLL + +G P ++ F+ K
Sbjct: 209 TTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 364 E 364
E
Sbjct: 267 E 267
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 11 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 66
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 67 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 114
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 115 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 166
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 167 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 222 LLTGRTLFPGTD---HIDQLKLI 241
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 60/326 (18%)
Query: 122 IKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELI 179
+E L FL++ + F S+E R L ++G V+ +KK L+ E
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK----LQHSTEEH 72
Query: 180 KKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYEFRRNGSLQDI 236
+D E EI ++H NIV + RR+ L++ E+ GSL+D
Sbjct: 73 LRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDY 121
Query: 237 LYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 296
L + + +D + + I G+EYL R IHRD+ N+L++++ +I +
Sbjct: 122 L---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 175
Query: 297 FGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI----G 351
FGL K +P D + + APE S D++SFGV+L L
Sbjct: 176 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
Query: 352 KFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKI 403
K P +F + L++ ++N P +G +++ +++
Sbjct: 236 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGCPDEIYMIM-- 283
Query: 404 ACFCTLDDPNKRPNSKDVRCMLSQIQ 429
C ++ N+RP+ +D+ + QI+
Sbjct: 284 -TECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 60/326 (18%)
Query: 122 IKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELI 179
+E L FL++ + F S+E R L ++G V+ +KK L+ E
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK----LQHSTEEH 53
Query: 180 KKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYEFRRNGSLQDI 236
+D E EI ++H NIV + RR+ L++ E+ GSL+D
Sbjct: 54 LRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDY 102
Query: 237 LYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 296
L + + +D + + I G+EYL R IHRD+ N+L++++ +I +
Sbjct: 103 L---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 156
Query: 297 FGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI----G 351
FGL K +P D + + APE S D++SFGV+L L
Sbjct: 157 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 216
Query: 352 KFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKI 403
K P +F + L++ ++N P +G +++ +++
Sbjct: 217 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGCPDEIYMIM-- 264
Query: 404 ACFCTLDDPNKRPNSKDVRCMLSQIQ 429
C ++ N+RP+ +D+ + QI+
Sbjct: 265 -TECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 60/326 (18%)
Query: 122 IKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELI 179
+E L FL++ + F S+E R L ++G V+ +KK L+ E
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK----LQHSTEEH 52
Query: 180 KKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYEFRRNGSLQDI 236
+D E EI ++H NIV + RR+ L++ E+ GSL+D
Sbjct: 53 LRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDY 101
Query: 237 LYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 296
L + + +D + + I G+EYL R IHRD+ N+L++++ +I +
Sbjct: 102 L---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 155
Query: 297 FGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI----G 351
FGL K +P D + + APE S D++SFGV+L L
Sbjct: 156 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 215
Query: 352 KFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKI 403
K P +F + L++ ++N P +G +++ +++
Sbjct: 216 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGCPDEIYMIM-- 263
Query: 404 ACFCTLDDPNKRPNSKDVRCMLSQIQ 429
C ++ N+RP+ +D+ + QI+
Sbjct: 264 -TECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +K+ +++KK+ ++ +E RH + L
Sbjct: 21 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 80
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S L+YLH +++
Sbjct: 81 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKN--VVY 134
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RD++ N+++D D +I++FGL K I DG T GT Y+APE +
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 192 VDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G+VI +K+ +++KK+ ++ +E RH + L
Sbjct: 20 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 79
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D V E+ G L + +S+ R + AR A+ I S L+YLH +++
Sbjct: 80 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 133
Query: 277 RDIQPANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
RD++ N+++D D +I++FGL K I DG T GT Y+APE +
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 336 CDIYSFGVLLAVLVIGKFP 354
D + GV++ ++ G+ P
Sbjct: 191 VDWWGLGVVMYEMMCGRLP 209
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 60/326 (18%)
Query: 122 IKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELI 179
+E L FL++ + F S+E R L ++G V+ +KK L+ E
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK----LQHSTEEH 72
Query: 180 KKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYEFRRNGSLQDI 236
+D E EI ++H NIV + RR+ L++ E+ GSL+D
Sbjct: 73 LRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDY 121
Query: 237 LYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 296
L + + +D + + I G+EYL R IHRD+ N+L++++ +I +
Sbjct: 122 L---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 175
Query: 297 FGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI----G 351
FGL K +P D + + APE S D++SFGV+L L
Sbjct: 176 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
Query: 352 KFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKI 403
K P +F + L++ ++N P +G +++ +++
Sbjct: 236 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGCPDEIYMIM-- 283
Query: 404 ACFCTLDDPNKRPNSKDVRCMLSQIQ 429
C ++ N+RP+ +D+ + QI+
Sbjct: 284 -TECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIAS 261
++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEAD--ASHCIQQI--- 112
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGT 318
LE + H+ ++HRD++P N+L+ + ++++FGLA + + + AGT
Sbjct: 113 -LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG--DQQAWFGFAGT 169
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GY++PE + A DI++ GV+L +L++G P D QH
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQH 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+I E+ ++RH NI+ L + +L+ E G L D L E + L
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------AEKESLT 113
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGH 307
Q + L+ +H H RI H D++P N+++ D + ++ +FG+A +I G+
Sbjct: 114 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 173
Query: 308 TRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
+ GT ++APE L D++S GV+ +L+ G P F TK+ +L
Sbjct: 174 EFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETL 227
Query: 368 VQ 369
Sbjct: 228 TN 229
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ GSL D L L L +A IAS
Sbjct: 236 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 292
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGL + I D + T + +
Sbjct: 293 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIED-NEYTARQGAKFPIKW 348
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 13/177 (7%)
Query: 184 EPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQG 243
E L K + +EI +++H NIV L L+ + G L D + V +G
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKG 111
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGLA 300
+ ++ I L+ + H I+HRD++P N+L +D+D + IS+FGL+
Sbjct: 112 -----FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 301 KRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
K G +T GT GY+APE S D +S GV+ +L+ G P D
Sbjct: 167 KMEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 64/336 (19%)
Query: 112 DRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKII 169
DR P F +E L FL++ + F S+E R L ++G V+ +KK
Sbjct: 4 DRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK-- 49
Query: 170 QPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYE 226
L+ E +D E EI ++H NIV + RR+ L++ E
Sbjct: 50 --LQHSTEEHLRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-E 96
Query: 227 FRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI 286
+ GSL+D L ++ +D + + I G+EYL R IHRD+ N+L+
Sbjct: 97 YLPYGSLRDYLQAHAE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILV 150
Query: 287 DDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+++ +I +FGL K +P D + + APE S D++SFGV+L
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 346 AVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGY 393
L K P +F + L++ ++N P +G
Sbjct: 211 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGC 260
Query: 394 EEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 261 PDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+I E+ ++RH NI+ L + +L+ E G L D L E + L
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------AEKESLT 127
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGH 307
Q + L+ +H H RI H D++P N+++ D + ++ +FG+A +I G+
Sbjct: 128 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 187
Query: 308 TRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
+ GT ++APE L D++S GV+ +L+ G P F TK+ +L
Sbjct: 188 EFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETL 241
Query: 368 VQ 369
Sbjct: 242 TN 243
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 126
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 127 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 143
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 144 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ G L D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 66/339 (19%)
Query: 109 GSRDRRPIIFSPLIKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIK 166
GSRD P F +E L FL++ + F S+E R L ++G V+ +K
Sbjct: 1 GSRD--PTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVK 46
Query: 167 KIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLL 223
K L+ E +D E EI ++H NIV + RR+ L+
Sbjct: 47 K----LQHSTEEHLRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 92
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
+ E+ GSL+D L + + +D + + I G+EYL R IHR++ N
Sbjct: 93 M-EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRN 145
Query: 284 VLIDDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFG 342
+L++++ +I +FGL K +P D + + APE S D++SFG
Sbjct: 146 ILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 205
Query: 343 VLLAVLVI----GKFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLG 390
V+L L K P +F + L++ ++N P
Sbjct: 206 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP---------- 255
Query: 391 NGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
+G +++ +++ C ++ N+RP+ +D+ + QI+
Sbjct: 256 DGCPDEIYMIM---TECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 41/268 (15%)
Query: 109 GSRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKI 168
GS++R P + +E + E + + +L + S G V A +G + +KK+
Sbjct: 1 GSQER-PTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKL 55
Query: 169 IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLL 223
+P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 56 SRPFQSI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
+ L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N
Sbjct: 104 LVTHLMGADLNNIV----KSQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSN 155
Query: 284 VLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFG 342
+ +++D E +I +FGL + HT T Y APE + + T DI+S G
Sbjct: 156 LAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 343 VLLAVLVIGK--FPSDDFFQHTKEMSLV 368
++A L+ G+ FP D H ++ L+
Sbjct: 211 CIMAELLTGRTLFPGTD---HIDQLKLI 235
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
+I E+ ++RH NI+ L + +L+ E G L D L E + L
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------AEKESLT 106
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGH 307
Q + L+ +H H RI H D++P N+++ D + ++ +FG+A +I G+
Sbjct: 107 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 166
Query: 308 TRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
+ GT ++APE L D++S GV+ +L+ G P F TK+ +L
Sbjct: 167 EFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETL 220
Query: 368 VQ 369
Sbjct: 221 TN 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 252
+ +EI +++H NIV L LV + G L D + + R
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE----RGVYTEKDA 108
Query: 253 HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTR 309
+ Q + S ++YLH + I+HRD++P N+L +++ + I++FGL+K +G
Sbjct: 109 SLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTK 363
T GT GY+APE S D +S GV+ +L+ G P F++ T+
Sbjct: 166 TA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP---FYEETE 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 170 QPLKSGAELI------KKDSEPLHHKMIQIRSEIITAGQVR-------HRNIVPLLARMV 216
+PL G+ I KK ++ K+I R E T ++ H NIV L
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E G L ++ + ++ I + + S + ++H ++H
Sbjct: 77 DQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVH 129
Query: 277 RDIQPANVLI---DDDMEARISEFGLAK-RIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
RD++P N+L +D++E +I +FG A+ + PD T T+ Y APE
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP---CFTLHYAAPELLNQNGY 186
Query: 333 SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM---SLVQWMRNV 374
++CD++S GV+L ++ G+ P F H + + S V+ M+ +
Sbjct: 187 DESCDLWSLGVILYTMLSGQVP---FQSHDRSLTCTSAVEIMKKI 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
IA+ A G++YLH IIHRD++ N+ + +D+ +I +FGLA T + WS
Sbjct: 109 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-------TVKSRWS 158
Query: 315 -------LAGTVGYIAPEC---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
L+G++ ++APE S D+Y+FG++L L+ G+ P +
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 50/273 (18%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 174 R------TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG 227
Query: 356 DDFFQHTKEMSLVQWMRNVMTSENPNRAINSKL 388
D+ QW + + P A KL
Sbjct: 228 RDYID--------QWNKVIEQLGTPCPAFMKKL 252
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS 261
++RH +V L A +V + +V E+ G L D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I D + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKW 181
Query: 322 IAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFP 354
APE + D++SFG+LL L G+ P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT Y+AP + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPAIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 153
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 154 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEFSFNPSHNPEEQL 147
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 205 XXKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 360 QHTKE 364
+ KE
Sbjct: 263 KLLKE 267
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I ++GLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDYGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ G V+ + + ++ ++I+K S ++ E+ + H NI+ L
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS-KLLEEVAVLKLLDHPNIMKLYDFFE 106
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
+ LV E + G L +D R + + + I + + SG+ YLH + I+H
Sbjct: 107 DKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVH 159
Query: 277 RDIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
RD++P N+L++ D +I +FGL+ + + GT YIAPE +
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFEN---QKKMKERLGTAYYIAPEVLRK-KYD 215
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
+ CD++S GV+L +L+ G P
Sbjct: 216 EKCDVWSIGVILFILLAGYPP 236
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 42/243 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 174 R------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
Query: 356 DDF 358
D+
Sbjct: 228 RDY 230
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL + + D TT
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I FGLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILGFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 60/326 (18%)
Query: 122 IKEEDLAFLEK--EDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELI 179
+E L FL++ + F S+E R L ++G V+ +KK L+ E
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKK----LQHSTEEH 54
Query: 180 KKDSEPLHHKMIQIRSEIITAGQVRHRNIVP---LLARMVRRDCDLLVYEFRRNGSLQDI 236
+D E EI ++H NIV + RR+ L++ E+ GSL+D
Sbjct: 55 LRDFE----------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDY 103
Query: 237 LYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 296
L + + +D + + I G+EYL R IHRD+ N+L++++ +I +
Sbjct: 104 L---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157
Query: 297 FGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI----G 351
FGL K +P D + + APE S D++SFGV+L L
Sbjct: 158 FGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
Query: 352 KFPSDDFFQHTKE--------MSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKI 403
K P +F + L++ ++N P +G +++ +++
Sbjct: 218 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----------DGCPDEIYMIM-- 265
Query: 404 ACFCTLDDPNKRPNSKDVRCMLSQIQ 429
C ++ N+RP+ +D+ + QI+
Sbjct: 266 -TECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 42/243 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 174 R------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
Query: 356 DDF 358
D+
Sbjct: 228 RDY 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E+ NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLAG 317
IASG++YL +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 156 IASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 318 TVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMI---QIRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + +I E+ QV H N++ L
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
R +L+ E G L D L +Q + A I Q I G+ YLH
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQ-ILDGVNYLHTK--- 134
Query: 273 RIIHRDIQPANVLIDDDM----EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D ++ +FGLA I DG ++ GT ++APE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVN 191
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQD-ILYDVSQGRRELDWLARHRIAQGIASG 262
+H NI+ L LV E R G L D IL RE + + I
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEA----RISEFGLAK--RIPDGHTRTTTWSLA 316
+EYLH ++HRD++P+N+L D+ RI +FG AK R +G T +
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--- 187
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
T ++APE + + CDI+S G+LL ++ G P
Sbjct: 188 -TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSE-IITAGQVRHRNIVPLLARM 215
GS G+V+ + + + ++++K + + I SE + V+H +V L
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF 108
Query: 216 VRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRII 275
D V ++ G L Y + + R L+ AR A+ IAS L YLH + I+
Sbjct: 109 QTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAE-IASALGYLHSLN---IV 161
Query: 276 HRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
+RD++P N+L+D +++FGL K + +TT + GT Y+APE T
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRT 219
Query: 336 CDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
D + G +L ++ G P + ++T EM
Sbjct: 220 VDWWCLGAVLYEMLYGLPPF--YSRNTAEM 247
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI ++ H NIV LL + + LV+EF L+D + D S L + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFM-DASA----LTGIPLPLI 105
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHE 163
Query: 316 AGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYCYNPSHNPEEQL 147
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+ +TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 205 YYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 360 QHTKE 364
+ KE
Sbjct: 263 KLLKE 267
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 254
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYCYNPSHNPEEQL 132
Query: 255 -------IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--D 305
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I D
Sbjct: 133 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 306 GHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFF 359
+ +TT L V ++APE + D++SFGVLL + +G P ++ F
Sbjct: 190 YYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
Query: 360 QHTKE 364
+ KE
Sbjct: 248 KLLKE 252
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 104 LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 49/264 (18%)
Query: 123 KEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE----- 177
K+ D++++ K Y S K+ + + Y E+ S+ V+ + ++P+ SGA+
Sbjct: 26 KQVDVSYIAKH-YNMSKSKV----DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCA 80
Query: 178 ----------LIKKDSEPLHHKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC----- 220
IKK S P ++ R+ E++ V H+NI+ LL +
Sbjct: 81 AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140
Query: 221 -DLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDI 279
LV E Q I + ELD + + G+++LH + IIHRD+
Sbjct: 141 DVYLVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDL 190
Query: 280 QPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTC 336
+P+N+++ D +I +FGLA+ T T++ + V Y APE + +
Sbjct: 191 KPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 337 DIYSFGVLLAVLVIGK--FPSDDF 358
DI+S G ++ +V K FP D+
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 49/264 (18%)
Query: 123 KEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE----- 177
K+ D++++ K Y S K+ + + Y E+ S+ V+ + ++P+ SGA+
Sbjct: 26 KQVDVSYIAKH-YNMSKSKV----DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCA 80
Query: 178 ----------LIKKDSEPLHHKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC----- 220
IKK S P ++ R+ E++ V H+NI+ LL +
Sbjct: 81 AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140
Query: 221 -DLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDI 279
LV E Q I + ELD + + G+++LH + IIHRD+
Sbjct: 141 DVYLVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDL 190
Query: 280 QPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTC 336
+P+N+++ D +I +FGLA+ T T++ + V Y APE + +
Sbjct: 191 KPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 337 DIYSFGVLLAVLVIGK--FPSDDF 358
DI+S G ++ +V K FP D+
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 126/303 (41%), Gaps = 44/303 (14%)
Query: 135 YFASLEKIRSCW------NGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHH 188
YF S+EK + G V K +GR++ IKK ++ +++KK
Sbjct: 20 YFQSMEKYENLGLVGEGSYGMVMKCR-NKDTGRIVAIKKFLE--SDDDKMVKK------- 69
Query: 189 KMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELD 248
I +R EI Q+RH N+V LL ++ LV+EF + IL D+ LD
Sbjct: 70 --IAMR-EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLD 122
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
+ + I +G+ + H SH IIHRDI+P N+L+ ++ +FG A+ +
Sbjct: 123 YQVVQKYLFQIINGIGFCH-SHN--IIHRDIKPENILVSQSGVVKLCDFGFARTL--AAP 177
Query: 309 RTTTWSLAGTVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSD---DFFQHT 362
T Y APE V D+++ G L+ + +G+ FP D D H
Sbjct: 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI 237
Query: 363 KEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQML---------LVLKIACFCTLDDPN 413
M L + N N L E + L +V+ +A C DP+
Sbjct: 238 M-MCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPD 296
Query: 414 KRP 416
KRP
Sbjct: 297 KRP 299
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 254
SE GQ H NI+ L + + +++ E+ NGSL D + GR + L
Sbjct: 79 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVG-- 135
Query: 255 IAQGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTT 312
+ +GI SG++YL MS +HRD+ N+L++ ++ ++S+FG+++ + D TT
Sbjct: 136 MLRGIGSGMKYLSDMSA----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 313 WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + APE + D++S+G+++ V+ G+ P
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 36/239 (15%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-YDVSQG- 243
++ R+ E++ V H+NI+ LL + + EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVI 119
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-- 174
Query: 304 PDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
T T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 7 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 53
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI ++ H NIV LL + + LV+EF + L+D + D S L + I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASA----LTGIPLPLI 107
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHE 165
Query: 316 AGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 52
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 162 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 12 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 58
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 110
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 168 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 19/139 (13%)
Query: 223 LVYEFRRNGSLQD-ILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
LV E R G L D IL RE + + I +EYLH ++HRD++P
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQ---GVVHRDLKP 149
Query: 282 ANVLIDDDMEA----RISEFGLAK--RIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
+N+L D+ RI +FG AK R +G T + T ++APE + +
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY----TANFVAPEVLKRQGYDEG 205
Query: 336 CDIYSFGVLLAVLVIGKFP 354
CDI+S G+LL ++ G P
Sbjct: 206 CDIWSLGILLYTMLAGYTP 224
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMI---QIRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + +I E+ QV H N++ L
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
R +L+ E G L D L +Q + A I Q I G+ YLH
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQ-ILDGVNYLHTK--- 134
Query: 273 RIIHRDIQPANVLIDDDM----EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D ++ +FGLA I DG ++ GT ++APE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVN 191
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 227
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 161 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 158 SSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVR 217
SSG+++ +KK+ +L K+ L + +E++ +H N+V + +
Sbjct: 43 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 88
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 89 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
DI+ ++L+ D ++S+FG ++ R L GT ++APE + D
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 198
Query: 338 IYSFGVLLAVLVIGKFP 354
I+S G+++ +V G+ P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 54
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI ++ H NIV LL + + LV+EF + L+D + D S L + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASA----LTGIPLPLI 108
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHE 166
Query: 316 AGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 12 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 58
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 110
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 167
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 168 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 158 SSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVR 217
SSG+++ +KK+ +L K+ L + +E++ +H N+V + +
Sbjct: 47 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 92
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 93 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
DI+ ++L+ D ++S+FG ++ R L GT ++APE + D
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 202
Query: 338 IYSFGVLLAVLVIGKFP 354
I+S G+++ +V G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
++H +V L A +V ++ ++ EF GSL D L ++ L L + IA G
Sbjct: 67 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEG 123
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
+ ++ + IHRD++ AN+L+ + +I++FGLA+ I D T + +
Sbjct: 124 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWT 179
Query: 323 APECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
APE + + D++SFG+LL ++ G+ P
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ RI++FGLA+ I D + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 186 LHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQG-R 244
L K + +EI +++H NIV L L+ + G L D + V +G
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFY 113
Query: 245 RELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGLAK 301
E D R+ + ++YLH I+HRD++P N+L +D+D + IS+FGL+K
Sbjct: 114 TERD---ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 302 RIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
G +T GT GY+APE S D +S GV+ +L+ G P D
Sbjct: 168 MEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMI---QIRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + +I E+ QV H NI+ L
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH 81
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
R +L+ E G L D L +Q + A I Q I G+ YLH
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQ-ILDGVNYLHTK--- 134
Query: 273 RIIHRDIQPANVLIDDDM----EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D ++ +FGLA I DG ++ GT ++APE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVN 191
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 227
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 9 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 55
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 107
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 164
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 165 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 36/239 (15%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-YDVSQG- 243
++ R+ E++ V H+NI+ LL + + EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVI 119
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-- 174
Query: 304 PDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
T T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIAS 261
++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEAD--ASHCIHQI--- 139
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGT 318
LE ++ H+ I+HRD++P N+L+ + ++++FGLA + + + AGT
Sbjct: 140 -LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG--EQQAWFGFAGT 196
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GY++PE + DI++ GV+L +L++G P D QH
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQH 239
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 158 SSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVR 217
SSG+++ +KK+ +L K+ L + +E++ +H N+V + +
Sbjct: 54 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 99
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 100 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
DI+ ++L+ D ++S+FG ++ R L GT ++APE + D
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 209
Query: 338 IYSFGVLLAVLVIGKFP 354
I+S G+++ +V G+ P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 158 SSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVR 217
SSG+++ +KK+ +L K+ L + +E++ +H N+V + +
Sbjct: 52 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 97
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 98 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
DI+ ++L+ D ++S+FG ++ R L GT ++APE + D
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 207
Query: 338 IYSFGVLLAVLVIGKFP 354
I+S G+++ +V G+ P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 36/239 (15%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-YDVSQG- 243
++ R+ E++ V H+NI+ LL + + EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVI 119
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-- 174
Query: 304 PDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
T T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYD 239
++ R+ E++ V H+NI+ LL + LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--- 119
Query: 240 VSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGL
Sbjct: 120 ----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 300 AKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
A+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 173 AR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 355 SDDF 358
D+
Sbjct: 227 GRDY 230
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 36/239 (15%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-YDVSQG- 243
++ R+ E++ V H+NI+ LL + + EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVI 119
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-- 174
Query: 304 PDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
T T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 17/187 (9%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 254
+E++ +H N+V + + + ++ EF + G+L DI VSQ R + +A
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI---VSQVRLNEEQIAT-- 145
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + + L YLH +IHRDI+ ++L+ D ++S+FG +I +
Sbjct: 146 VCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX-- 200
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNV 374
L GT ++APE + DI+S G+++ +V G+ P +F S VQ M+ +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP---YFSD----SPVQAMKRL 253
Query: 375 MTSENPN 381
S P
Sbjct: 254 RDSPPPK 260
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 223 LVYEFRRNGSLQDILYDVSQGR---------RELDWLARHRIAQGIASGLEYLHMSHRPR 273
L + F+ N +L ++ V+ G R + AR AQ I EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD--- 161
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
+I+RD++P N+LID ++++FG AKR+ + TW L GT +APE + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEALAPEIILSKGYN 216
Query: 334 DTCDIYSFGVLLAVLVIGKFP 354
D ++ GVL+ + G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 42/243 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 174 R------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
Query: 356 DDF 358
D+
Sbjct: 228 RDY 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
++H +V L A +V ++ ++ EF GSL D L ++ L L + IA G
Sbjct: 240 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEG 296
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
+ ++ + IHRD++ AN+L+ + +I++FGLA+ I D + T + +
Sbjct: 297 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWT 352
Query: 323 APECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
APE + + D++SFG+LL ++ G+ P
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV 216
G+ RV T +I + ++I+K +P H + R + HRN++ L+
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEK--QPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE 81
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
D LV+E R GS+ ++ RR + L + Q +AS L++LH I H
Sbjct: 82 EEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLH---NKGIAH 134
Query: 277 RDIQPANVLIDDDME---ARISEFGLAKRIP---DGHTRTTTWSL--AGTVGYIAPECHQ 328
RD++P N+L + + +I +F L I D +T L G+ Y+APE +
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 329 TVALSDT-----CDIYSFGVLLAVLVIGKFP 354
+ + CD++S GV+L +L+ G P
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 27/199 (13%)
Query: 173 KSGAEL-IKKDSEPLHHKMIQIRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDL-L 223
+SG ++ IKK S P ++ R+ E++ ++H N++ LL A +R D L
Sbjct: 65 RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 124
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
V F + LQ I+ + ++ +L + GL+Y+H + ++HRD++P N
Sbjct: 125 VMPFMQT-DLQKIM-GMEFSEEKIQYLVYQML-----KGLKYIHSAG---VVHRDLKPGN 174
Query: 284 VLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFG 342
+ +++D E +I +FGLA+ H T Y APE + + + T DI+S G
Sbjct: 175 LAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 229
Query: 343 VLLAVLVIGK--FPSDDFF 359
++A ++ GK F D+
Sbjct: 230 CIMAEMLTGKTLFKGKDYL 248
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLID-----DDMEARISEFGLAKRIPDG-HT 308
+ Q SGL +LH + I+HRD++P N+LI ++A IS+FGL K++ G H+
Sbjct: 123 LLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 309 RTTTWSLAGTVGYIAPE-----CHQTVALSDTCDIYSFG-VLLAVLVIGKFPSDDFFQHT 362
+ + GT G+IAPE C + T DI+S G V V+ G P Q
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTY--TVDIFSAGCVFYYVISEGSHPFGKSLQRQ 237
Query: 363 KEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
+ L + + E I +L+ E+M+ + DP KRP++K V
Sbjct: 238 ANILLGACSLDCLHPEKHEDVIARELI-----EKMIAM----------DPQKRPSAKHV 281
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 27/198 (13%)
Query: 173 KSGAEL-IKKDSEPLHHKMIQIRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDL-L 223
+SG ++ IKK S P ++ R+ E++ ++H N++ LL A +R D L
Sbjct: 47 RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 106
Query: 224 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPAN 283
V F + LQ I+ + ++ +L + GL+Y+H + ++HRD++P N
Sbjct: 107 VMPFMQT-DLQKIM-GLKFSEEKIQYLVYQML-----KGLKYIHSA---GVVHRDLKPGN 156
Query: 284 VLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFG 342
+ +++D E +I +FGLA+ H T Y APE + + + T DI+S G
Sbjct: 157 LAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211
Query: 343 VLLAVLVIGK--FPSDDF 358
++A ++ GK F D+
Sbjct: 212 CIMAEMLTGKTLFKGKDY 229
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E NGSL L +D +L + R G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 126
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 127 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 42/283 (14%)
Query: 96 LTTTSRILAAGRGG-----SRDRRPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEV 150
L +TS AG S RP + +E + E + + +L + S G V
Sbjct: 11 LESTSLYKKAGSAAAPFTMSHKERPTFYR---QELNKTIWEVPERYQTLSPVGSGAYGSV 67
Query: 151 YKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVP 210
+ SG I +KK+ +P +S +H K + E+ ++H N++
Sbjct: 68 CSS-YDVKSGLKIAVKKLSRPFQSI----------IHAK--RTYRELRLLKHMKHENVIG 114
Query: 211 LL-----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEY 265
LL A + D+ + L +I+ + ++ D + I Q I GL+Y
Sbjct: 115 LLDVFTPATSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKY 169
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
+H + IIHRD++P+N+ +++D E +I +FGLA+ HT T Y APE
Sbjct: 170 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 221
Query: 326 CH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFFQHTKEM 365
+ + T DI+S G ++A L+ G+ FP D +++
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I +F LA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDFYLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 42/243 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 8 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 68 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 124
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 125 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 178
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + D++S G ++ +V K FP
Sbjct: 179 R------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 232
Query: 356 DDF 358
D+
Sbjct: 233 RDY 235
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
V E+ G D++Y + Q R + A A+ IA GL +L II+RD++
Sbjct: 98 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQSKG---IIYRDLKLD 150
Query: 283 NVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NV++D + +I++FG+ K I DG TT GT YIAPE + D ++F
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 342 GVLLAVLVIGKFP-----SDDFFQHTKEMSLV 368
GVLL ++ G+ P D+ FQ E ++
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 239
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
V E+ G D++Y + Q R + A A+ IA GL +L II+RD++
Sbjct: 419 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQSKG---IIYRDLKLD 471
Query: 283 NVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NV++D + +I++FG+ K I DG TT GT YIAPE + D ++F
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 342 GVLLAVLVIGKFP-----SDDFFQHTKEMSLV 368
GVLL ++ G+ P D+ FQ E ++
Sbjct: 529 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 560
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 158 SSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVR 217
SSG+++ +KK+ +L K+ L + +E++ +H N+V + +
Sbjct: 97 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 142
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 143 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
DI+ ++L+ D ++S+FG ++ R L GT ++APE + D
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 252
Query: 338 IYSFGVLLAVLVIGKFP 354
I+S G+++ +V G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIA 260
GQ H NI+ L + + ++V E+ NGSL D + G+ + L + +GI+
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVG--MLRGIS 134
Query: 261 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLAGT 318
+G++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 135 AGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + APE + D++S+G+++ V+ G+ P
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 42/243 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + D++S G ++ +V K FP
Sbjct: 174 R------TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 227
Query: 356 DDF 358
D+
Sbjct: 228 RDY 230
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 160
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLA 316
IASG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 160
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 7 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 53
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 105
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYX 163
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 52
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 162
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 54
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 106
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 164
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 7 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 53
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 105
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 163
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 54
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 106
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 164
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 205 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 262
Query: 364 E 364
E
Sbjct: 263 E 263
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 7 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 53
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 105
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 163
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 5 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 64
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 65 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 121
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 122 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 175
Query: 301 KRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
+ T T Y APE + + DI+S G ++ ++ G FP D
Sbjct: 176 R---TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 231
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 52
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 162
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 52
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYX 162
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 42/242 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 4 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 120
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 121 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 174
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ ++ G FP
Sbjct: 175 R------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228
Query: 356 DD 357
D
Sbjct: 229 TD 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 54
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKTFMDASA----LTGIPLP 106
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 164
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
E T ++ H +V + +V E+ NG L + L +G L +
Sbjct: 53 EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL---EM 109
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ G+ +L SH+ IHRD+ N L+D D+ ++S+FG+ + + D ++
Sbjct: 110 CYDVCEGMAFLE-SHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV-GT 165
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSD 356
V + APE S D+++FG+L+ V +GK P D
Sbjct: 166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 42/242 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ ++ G FP
Sbjct: 174 R------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Query: 356 DD 357
D
Sbjct: 228 TD 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIAS 261
++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEAD--ASHCIQQI--- 112
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGT 318
LE ++ H I+HRD++P N+L+ + ++++FGLA + + + AGT
Sbjct: 113 -LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG--DQQAWFGFAGT 169
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 203 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 260
Query: 364 E 364
E
Sbjct: 261 E 261
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 208 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 265
Query: 364 E 364
E
Sbjct: 266 E 266
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 42/242 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ ++ G FP
Sbjct: 174 R------TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Query: 356 DD 357
D
Sbjct: 228 TD 229
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 42/242 (17%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
RS + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDV 240
++ R+ E++ V H+NI+ LL + D+ + + +L ++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI--- 119
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 ---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 301 KRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPS 355
+ T T++ + V Y APE + + DI+S G ++ ++ G FP
Sbjct: 174 R------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Query: 356 DD 357
D
Sbjct: 228 TD 229
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 9 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 55
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 107
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 165
Query: 314 SLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 166 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 42/238 (17%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLHHKMIQ 192
+ Y E+ S+ V+ + ++P+ SGA+ IKK S P ++
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 60
Query: 193 IRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR 245
R+ E++ V H+NI+ LL + + D+ + + +L ++ +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QM 114
Query: 246 ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 115 ELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---- 167
Query: 306 GHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T T++ + V Y APE + + DI+S G ++ +V K FP D+
Sbjct: 168 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYD 239
++ R+ E++ V H+NI+ LL + LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--- 119
Query: 240 VSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGL
Sbjct: 120 ----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 300 AKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
A+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 173 AR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 355 SDDF 358
D+
Sbjct: 227 GRDY 230
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 61
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYD 239
++ R+ E++ V H+NI+ LL + LV E Q I
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--- 118
Query: 240 VSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGL
Sbjct: 119 ----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 171
Query: 300 AKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
A+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 172 AR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 225
Query: 355 SDDF 358
D+
Sbjct: 226 GRDY 229
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIAS 261
++H NIV L + LV++ G L +DI+ + E D A H I Q
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEAD--ASHCIQQI--- 112
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGT 318
LE ++ H I+HRD++P N+L+ + ++++FGLA + + + AGT
Sbjct: 113 -LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG--DQQAWFGFAGT 169
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 14/120 (11%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
+IA I LE+LH + +IHRD++P+NVLI+ + ++ +FG++ + D +T
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID- 213
Query: 314 SLAGTVGYIA-----PECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF---FQHTKEM 365
AG Y+A PE +Q S DI+S G+ + L I +FP D + FQ K++
Sbjct: 214 --AGCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+PLH EI ++H+NIV L + E GSL +L
Sbjct: 63 SQPLHE-------EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG 115
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAK 301
++ + Q I GL+YLH + +I+HRDI+ NVLI+ +IS+FG +K
Sbjct: 116 PLKDNEQTIGFYTKQ-ILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171
Query: 302 RIPDGHTRTTTWSLAGTVGYIAPEC--HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFF 359
R+ + T T++ GT+ Y+APE DI+S G + + GK P +
Sbjct: 172 RLAGINPCTETFT--GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG 229
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
+ M V + ++ ++ + E +LK C DP+KR +
Sbjct: 230 EPQAAMFKVGMFK-----------VHPEIPESMSAEAKAFILK----CFEPDPDKRACAN 274
Query: 420 DV 421
D+
Sbjct: 275 DL 276
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYD 239
++ R+ E++ V H+NI+ LL + LV E Q I
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--- 120
Query: 240 VSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGL
Sbjct: 121 ----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 300 AKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
A+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 174 AR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 355 SDDF 358
D+
Sbjct: 228 GRDY 231
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYD 239
++ R+ E++ V H+NI+ LL + LV E Q I
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--- 120
Query: 240 VSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGL
Sbjct: 121 ----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 300 AKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
A+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 174 AR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 355 SDDF 358
D+
Sbjct: 228 GRDY 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIAS 261
++H NIV L + L+++ G L +DI+ + E D A H I Q
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--AREYYSEAD--ASHCIQQI--- 130
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGT 318
LE + H+ ++HRD++P N+L+ ++ ++++FGLA + + + AGT
Sbjct: 131 -LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG--EQQAWFGFAGT 187
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 230
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 158 SSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVR 217
SSG+++ +KK+ +L K+ L + +E++ +H N+V + +
Sbjct: 174 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 219
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 220 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
DI+ ++L+ D ++S+FG ++ R L GT ++APE + D
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 329
Query: 338 IYSFGVLLAVLVIGKFP 354
I+S G+++ +V G+ P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 220 CDLLVYEFRRNGSLQDILYDVSQGRR--ELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
C + EF G+L+ + + RR +LD + + + I G++Y+H ++I+R
Sbjct: 94 CLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINR 146
Query: 278 DIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCD 337
D++P+N+ + D + +I +FGL + + R + GT+ Y++PE + D
Sbjct: 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGTLRYMSPEQISSQDYGKEVD 203
Query: 338 IYSFGVLLAVLV--------IGKFPSD-------DFFQHTKEMSLVQWMRNVMTSENPNR 382
+Y+ G++LA L+ KF +D D F KE +L+Q + + + PN
Sbjct: 204 LYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK-KEKTLLQKLLSKKPEDRPNT 262
Query: 383 A 383
+
Sbjct: 263 S 263
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 143 RSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLH 187
+S + + Y E+ S+ V+ + ++P+ SGA+ IKK S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 188 HKMIQIRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYD 239
++ R+ E++ V H+NI+ LL + LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--- 119
Query: 240 VSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL 299
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGL
Sbjct: 120 ----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 300 AKRIPDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
A+ T T++ + V Y APE + + DI+S G ++ +V K FP
Sbjct: 173 AR------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 355 SDDF 358
D+
Sbjct: 227 GRDY 230
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I + GLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDAGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 262 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 319
Query: 364 E 364
E
Sbjct: 320 E 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLHHKMI 191
+ + Y E+ S+ V+ + ++P+ SGA+ IKK S P ++
Sbjct: 1 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 60
Query: 192 QIRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYDVSQG 243
R+ E++ V H+NI+ LL + LV E Q I
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------- 113
Query: 244 RRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI 303
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-- 168
Query: 304 PDGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T T++ + V Y APE + + DI+S G ++ +V K FP D+
Sbjct: 169 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I + GLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDGGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+PLH EI ++H+NIV L + E GSL +L
Sbjct: 49 SQPLH-------EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG 101
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAK 301
++ + Q I GL+YLH + +I+HRDI+ NVLI+ +IS+FG +K
Sbjct: 102 PLKDNEQTIGFYTKQ-ILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 157
Query: 302 RIPDGHTRTTTWSLAGTVGYIAPEC--HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFF 359
R+ + T T++ GT+ Y+APE DI+S G + + GK P +
Sbjct: 158 RLAGINPCTETFT--GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG 215
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
+ M V + ++ ++ + E +LK C DP+KR +
Sbjct: 216 EPQAAMFKVGMFK-----------VHPEIPESMSAEAKAFILK----CFEPDPDKRACAN 260
Query: 420 DV 421
D+
Sbjct: 261 DL 262
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 114 RPIIFSPLIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLK 173
RP + +E + E + + +L + S G V A +G + +KK+ +P +
Sbjct: 5 RPTFYR---QELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQ 60
Query: 174 SGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFR 228
S +H K + E+ ++H N++ LL AR + D+ +
Sbjct: 61 SI----------IHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
L +I+ + ++ D + I Q I GL+Y+H + IIHRD++P+N+ +++
Sbjct: 109 MGADLNNIV----KCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNE 160
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT-VALSDTCDIYSFGVLLAV 347
D E +I + GLA+ HT T Y APE + + T DI+S G ++A
Sbjct: 161 DCELKILDRGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 348 LVIGK--FPSDDFFQHTKEMSLV 368
L+ G+ FP D H ++ L+
Sbjct: 216 LLTGRTLFPGTD---HIDQLKLI 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 33/231 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F LEK+ + VYK L ++G + +K++ K DSE IR
Sbjct: 7 FKQLEKLGNGTYATVYKG-LNKTTGVYVALKEV-----------KLDSEE-GTPSTAIR- 52
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLA 251
EI +++H NIV L + + LV+EF N L+ + + G EL+ +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 252 --RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
+ ++ QG+A H +I+HRD++P N+LI+ + ++ +FGLA+ G
Sbjct: 112 YFQWQLLQGLA-------FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPV 162
Query: 310 TTTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FPSDD 357
T S T+ Y AP+ + S + DI+S G +LA ++ GK FP +
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 201 GQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQG 258
GQ H NI+ L + + ++V E NGSL L +D +L + R G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG-HTRTTTWSLAG 317
IASG++YL +HRD+ N+LI+ ++ ++S+FGL++ + D TT
Sbjct: 156 IASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 318 TVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 42/239 (17%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLHHKMI 191
+ Y E+ S+ V+ + ++P+ SGA+ IKK S P ++
Sbjct: 1 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH 60
Query: 192 QIRS--EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDVSQGR 244
R+ E++ V H+NI+ LL + D+ + + +L ++ +
Sbjct: 61 AKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------Q 114
Query: 245 RELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 168
Query: 305 DGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T T++ + V Y APE + + D++S G ++ +V K FP D+
Sbjct: 169 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 224
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
+ ++ EI RHRNI+ L + ++++EF S DI ++ EL+
Sbjct: 46 VLVKKEISILNIARHRNILHLHESFESMEELVMIFEF---ISGLDIFERINTSAFELNER 102
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA--RISEFGLAKRIPDGHT 308
+ L++LH SH I H DI+P N++ + +I EFG A+++ G
Sbjct: 103 EIVSYVHQVCEALQFLH-SHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLV 368
++ Y APE HQ +S D++S G L+ VL+ G P F T +
Sbjct: 160 FRLLFTAPE---YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP---FLAETNQ---- 209
Query: 369 QWMRNVMTSE 378
Q + N+M +E
Sbjct: 210 QIIENIMNAE 219
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ + KI + D+E IR
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKI-----------RLDTETEGVPSTAIR- 51
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ + KI + D+E IR
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKI-----------RLDTETEGVPSTAIR- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 267 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC 326
H+ +IIHRDI+P+N+L+D ++ +FG++ ++ D +T AG Y+APE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD---AGCRPYMAPER 196
Query: 327 HQTVALSDT----CDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNR 382
A D++S G+ L L G+FP + K S+ + V+ + P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFP------YPKWNSVFDQLTQVVKGDPPQ- 249
Query: 383 AINSKLLGNGYEEQM-LLVLKIACFCTLDDPNKRPNSKDV 421
L N E + + C D +KRP K++
Sbjct: 250 ------LSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLHHKMIQ 192
+ Y E+ S+ V+ + ++P+ SGA+ IKK S P ++
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 60
Query: 193 IRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYDVSQGR 244
R+ E++ V H+NI+ LL + LV E Q I +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------Q 113
Query: 245 RELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 114 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--- 167
Query: 305 DGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T T++ + V Y APE + + DI+S G ++ +V K FP D+
Sbjct: 168 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLHHKMIQ 192
+ Y E+ S+ V+ + ++P+ SGA+ IKK S P ++
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 61
Query: 193 IRS--EIITAGQVRHRNIVPLLARMVRRDC------DLLVYEFRRNGSLQDILYDVSQGR 244
R+ E++ V H+NI+ LL + LV E Q I +
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------Q 114
Query: 245 RELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--- 168
Query: 305 DGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T T++ + V Y APE + + DI+S G ++ +V K FP D+
Sbjct: 169 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
Q+R EI + H NI+ L R L+ E+ G L Y Q D
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQR 124
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
I + +A L Y H ++IHRDI+P N+L+ E +I++FG + P +T
Sbjct: 125 TATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT- 180
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ GT+ Y+ PE + ++ D++ GVL L++G P
Sbjct: 181 ---MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ L+ + S G V A + G +G + IKK+ +P +S EL K +
Sbjct: 27 YRDLQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQS--ELFAK----------RAYR 73
Query: 196 EIITAGQVRHRNIVPLLARMVRRDC-----DLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
E+ +RH N++ LL + D + L ++ G + +L
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 133
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
+ GL Y+H + IIHRD++P N+ +++D E +I +FGLA++ +
Sbjct: 134 VYQML-----KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ-----ADS 180
Query: 311 TTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFFQHTKEM 365
T Y APE + + T DI+S G ++A ++ GK F D KE+
Sbjct: 181 EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 45/238 (18%)
Query: 200 AGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY--DVSQGRRELDWLARHRIAQ 257
A + RN V + ++ + E+ N +L D+++ +++Q R E W R+ +
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-W----RLFR 123
Query: 258 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-------------- 303
I L Y+H IIHR+++P N+ ID+ +I +FGLAK +
Sbjct: 124 QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 304 PDGHTRTTTWSLAGTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHT 362
P T S GT Y+A E T ++ D YS G++ + +P F
Sbjct: 181 PGSSDNLT--SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YP---FSTGX 232
Query: 363 KEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLD-DPNKRPNSK 419
+ +++++ +R+V P+ +++ V K +D DPNKRP ++
Sbjct: 233 ERVNILKKLRSVSIEFPPD-----------FDDNKXKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 205 HRNIVPLLARMVRR------DCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQG 258
HRNI +++ D LV EF GS+ D++ + + +W+A I +
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICRE 137
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
I GL +LH ++IHRDI+ NVL+ ++ E ++ +FG++ ++ R T+ GT
Sbjct: 138 ILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF--IGT 192
Query: 319 VGYIAPE---CHQT--VALSDTCDIYSFGVLLAVLVIGKFP 354
++APE C + D++S G+ + G P
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
V E+ G D++Y + Q + + A A+ I+ GL +LH + II+RD++
Sbjct: 97 FVMEYVNGG---DLMYHIQQVGKFKEPQAVFYAAE-ISIGLFFLH---KRGIIYRDLKLD 149
Query: 283 NVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NV++D + +I++FG+ K + DG TT GT YIAPE + D +++
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDG---VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAY 206
Query: 342 GVLLAVLVIGKFPSD 356
GVLL ++ G+ P D
Sbjct: 207 GVLLYEMLAGQPPFD 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 52
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI ++ H NIV LL + + LV+EF + L+ + D S L + I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASA----LTGIPLPLI 106
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHE 164
Query: 316 AGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 54
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI ++ H NIV LL + + LV+EF + L+ + D S L + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASA----LTGIPLPLI 108
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHE 166
Query: 316 AGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 131 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 185
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 242
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 243 SCDMWSLGVIMYILLCGYPP 262
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 137 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 191
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 248
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 249 SCDMWSLGVIMYILLCGYPP 268
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 254
+E++ H N+V + + + D +V EF G+L DI V+ R + +A
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAT-- 145
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + L YLH +IHRDI+ ++L+ D ++S+FG ++ +
Sbjct: 146 VCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX-- 200
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNV 374
L GT ++APE + DI+S G+++ ++ G+ P +F +Q MR +
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP---YFNEPP----LQAMRRI 253
Query: 375 MTSENP 380
S P
Sbjct: 254 RDSLPP 259
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAK--RIPDGHTRTTT 312
I +EYLH ++HRD++P+N+L D+ RI +FG AK R +G T
Sbjct: 125 ITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 313 WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ T ++APE + CDI+S GVLL ++ G P
Sbjct: 182 Y----TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR-------- 254
+ H +V L ++ ++ E+ NG L + L RE+ RHR
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLLE 124
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + D ++ S
Sbjct: 125 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS 181
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMR 372
V + PE S DI++FGVL+ + +GK P + F + Q +R
Sbjct: 182 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 239
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 92 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 146
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 203
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 204 SCDMWSLGVIMYILLCGYPP 223
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR-------- 254
+ H +V L ++ ++ E+ NG L + L RE+ RHR
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLLE 109
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + D ++ S
Sbjct: 110 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 166
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMR 372
V + PE S DI++FGVL+ + +GK P + F + Q +R
Sbjct: 167 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 224
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 87 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 141
Query: 278 DIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L ++++FG AK ++ TT T Y+APE
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 198
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 199 SCDMWSLGVIMYILLCGYPP 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQ-DILYDVSQGRRELDWLA 251
++ E ++H +IV LL +V+EF L +I+ G + +A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHT 308
H + Q LE L H IIHRD++P NVL+ ++ ++ +FG+A ++ G +
Sbjct: 133 SHYMRQI----LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GES 186
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKE 364
GT ++APE + D++ GV+L +L+ G P F TKE
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP----FYGTKE 238
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 254
+ H +V L ++ ++ E+ NG L + L RE+ RHR
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 123
Query: 255 -IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + D ++
Sbjct: 124 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 314 SLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMR 372
S V + PE S DI++FGVL+ + +GK P + F + Q +R
Sbjct: 181 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 239
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 87 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 141
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 198
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 199 SCDMWSLGVIMYILLCGYPP 218
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 91 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 145
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 202
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 203 SCDMWSLGVIMYILLCGYPP 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 93 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 147
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 204
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 205 SCDMWSLGVIMYILLCGYPP 224
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
L+ EF +GSL++ L + + +++ + + A I G++YL + +HRD+
Sbjct: 102 LIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAAR 155
Query: 283 NVLIDDDMEARISEFGLAKRI-PDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NVL++ + + +I +FGL K I D T V + APEC D++SF
Sbjct: 156 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215
Query: 342 GVLLAVLV 349
GV L L+
Sbjct: 216 GVTLHELL 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 85 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 139
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 196
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 197 SCDMWSLGVIMYILLCGYPP 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 86 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 140
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 197
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 198 SCDMWSLGVIMYILLCGYPP 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
L+ EF +GSL++ L + + +++ + + A I G++YL + +HRD+
Sbjct: 90 LIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAAR 143
Query: 283 NVLIDDDMEARISEFGLAKRI-PDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NVL++ + + +I +FGL K I D T V + APEC D++SF
Sbjct: 144 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 203
Query: 342 GVLLAVLV 349
GV L L+
Sbjct: 204 GVTLHELL 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR-------- 254
+ H +V L ++ ++ E+ NG L + L RE+ RHR
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLLE 115
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + D ++ S
Sbjct: 116 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 172
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMR 372
V + PE S DI++FGVL+ + +GK P + F + Q +R
Sbjct: 173 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 230
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR-------- 254
+ H +V L ++ ++ E+ NG L + L RE+ RHR
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLLE 104
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + D ++ S
Sbjct: 105 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 161
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMR 372
V + PE S DI++FGVL+ + +GK P + F + Q +R
Sbjct: 162 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 219
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D +
Sbjct: 136 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXS 189
Query: 311 TTWSLAG--TVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKEMSL 367
V ++A E QT + D++SFGVLL L+ G P D + L
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 249
Query: 368 VQWMRNVMTSENPN 381
+Q R + P+
Sbjct: 250 LQGRRLLQPEYCPD 263
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR-------- 254
+ H +V L ++ ++ E+ NG L + L RE+ RHR
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLLE 108
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + D ++ S
Sbjct: 109 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 165
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMR 372
V + PE S DI++FGVL+ + +GK P + F + Q +R
Sbjct: 166 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 252
+R+EI ++ H NI+ L LV E G L D + V +G + +
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI--VEKG-----YYSE 147
Query: 253 HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD---DMEARISEFGLAKRIPDGHTR 309
A + LE + H I+HRD++P N+L D +I++FGL+K + +
Sbjct: 148 RDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQ 204
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDD 357
++ GT GY APE + A D++S G++ +L+ G P D
Sbjct: 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 46/267 (17%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLHHKMI 191
+ + Y ++ S+ V+ + ++P+ SGA+ +KK S P ++
Sbjct: 5 DSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH 64
Query: 192 QIRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR 244
R+ E++ V H+NI+ LL + + D+ + + +L +++
Sbjct: 65 AKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH------ 118
Query: 245 RELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 119 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 172
Query: 305 DGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
T +T + + V Y APE + + DI+S G ++ LV G FQ
Sbjct: 173 ---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV----IFQG 225
Query: 362 TKEMSLVQWMRNVMTSENPNRAINSKL 388
T + QW + + P+ + L
Sbjct: 226 TDHID--QWNKVIEQLGTPSAEFMAAL 250
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 101 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 155
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ TT T Y+APE
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 212
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 213 SCDMWSLGVIMYILLCGYPP 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ + G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 253
EI ++ H NIV LL + + LV+E QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVH----QDLKTFMDASA----LTGIPLP 102
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR--IPDGHTRTT 311
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ +P RT
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T + T+ Y APE T DI+S G + A +V + FP D
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 24/234 (10%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEI-ITAGQVRHR 206
G+V +A G +K ++ LKS A +K++ + SE+ I + +H
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 110
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
NIV LL L++ E+ G L + L S R L+ IA AS + L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTASTRDLL 167
Query: 267 HMSHR----------PRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLA 316
H S + IHRD+ NVL+ + A+I +FGLA+ I + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQ 369
V ++APE + D++S+G+LL + +G P ++K LV+
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 137 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKE 364
H +T V ++A E QT + D++SFGVLL L+ G P D
Sbjct: 191 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
Query: 365 MSLVQWMRNVMTSENPN 381
+ L+Q R + P+
Sbjct: 248 VYLLQGRRLLQPEYCPD 264
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 128
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 129 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 182
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKE 364
H +T V ++A E QT + D++SFGVLL L+ G P D
Sbjct: 183 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 239
Query: 365 MSLVQWMRNVMTSENPN 381
+ L+Q R + P+
Sbjct: 240 VYLLQGRRLLQPEYCPD 256
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R +
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 126
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 127 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 184 YKAQTHGKWP----VKWYAPECINYYKFSSKSDVWSFGVLM 220
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R +
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 126
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 127 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 184 YKAQTHGKWP----VKWYAPECINYYKFSSKSDVWSFGVLM 220
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D +
Sbjct: 135 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 188
Query: 311 TTWSLAG--TVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKEMSL 367
V ++A E QT + D++SFGVLL L+ G P D + L
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
Query: 368 VQWMRNVMTSENPN 381
+Q R + P+
Sbjct: 249 LQGRRLLQPEYCPD 262
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R +
Sbjct: 61 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 116
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 117 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 174 YKAQTHGKWP----VKWYAPECINYYKFSSKSDVWSFGVLM 210
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 155
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 156 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 209
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 210 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 246
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 40/230 (17%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAE---------------LIKKDSEPLHHKMI 191
+ + Y E+ S+ V+ + ++P+ SGA+ +KK S P ++
Sbjct: 7 DNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH 66
Query: 192 QIRS--EIITAGQVRHRNIVPLL-----ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR 244
R+ E++ V H+NI+ LL + + D+ + + +L +++
Sbjct: 67 AKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH------ 120
Query: 245 RELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 174
Query: 305 DGHTRTTTWSLAGTV---GYIAPECHQTVALSDTCDIYSFGVLLAVLVIG 351
T T + + V Y APE + + DI+S G ++ LV G
Sbjct: 175 ---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR-------- 254
+ H +V L ++ ++ E+ NG L + L RE+ RHR
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLLE 109
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + D ++ S
Sbjct: 110 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGS 166
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMR 372
V + PE S DI++FGVL+ + +GK P + F + Q +R
Sbjct: 167 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 133
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 134 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 187
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKE 364
H +T V ++A E QT + D++SFGVLL L+ G P D
Sbjct: 188 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 244
Query: 365 MSLVQWMRNVMTSENPN 381
+ L+Q R + P+
Sbjct: 245 VYLLQGRRLLQPEYCPD 261
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 131
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 132 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKE 364
H +T V ++A E QT + D++SFGVLL L+ G P D
Sbjct: 186 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 242
Query: 365 MSLVQWMRNVMTSENPN 381
+ L+Q R + P+
Sbjct: 243 VYLLQGRRLLQPEYCPD 259
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 154
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 155 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 208
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKE 364
H +T V ++A E QT + D++SFGVLL L+ G P D
Sbjct: 209 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 265
Query: 365 MSLVQWMRNVMTSENPN 381
+ L+Q R + P+
Sbjct: 266 VYLLQGRRLLQPEYCPD 282
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 136 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 189
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDDFFQHTKE 364
H +T V ++A E QT + D++SFGVLL L+ G P D
Sbjct: 190 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 246
Query: 365 MSLVQWMRNVMTSENPN 381
+ L+Q R + P+
Sbjct: 247 VYLLQGRRLLQPEYCPD 263
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R D
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK 111
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ Q ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 112 NIIELVHQ-VSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 168 YKAQTHGKWP----VKWYAPECINYYKFSSKSDVWSFGVLM 204
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R D
Sbjct: 51 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK 107
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ Q ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 108 NIIELVHQ-VSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 164 YKAQTHGKWP----VKWYAPECINYYKFSSKSDVWSFGVLM 200
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R +
Sbjct: 69 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 124
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 125 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 182 YKAQTHGKW----PVKWYAPECINYYKFSSKSDVWSFGVLM 218
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R D
Sbjct: 49 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK 105
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ Q ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 106 NIIELVHQ-VSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 162 YKAQTHGKWP----VKWYAPECINYYKFSSKSDVWSFGVLM 198
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 137 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVI-GKFPSDD 357
H +T V ++A E QT + D++SFGVLL L+ G P D
Sbjct: 191 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIAQGIAS 261
++H NIV L + L+++ G L +DI+ + E D A H I Q
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--AREYYSEAD--ASHCIQQI--- 119
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGT 318
LE + H+ ++HR+++P N+L+ ++ ++++FGLA + + + AGT
Sbjct: 120 -LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG--EQQAWFGFAGT 176
Query: 319 VGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQH 361
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 251
+H+NI+ LL + ++ + G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP--DGHTR 309
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I D + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIG-----KFPSDDFFQHTK 363
TT L V ++APE + D++SFGVL+ + +G P ++ F+ K
Sbjct: 216 TTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 364 E 364
E
Sbjct: 274 E 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ 369
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETLAN 228
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V+ AE I ++ LK ++ +KD +E++T ++H +
Sbjct: 27 GKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD--------FHREAELLT--NLQHEH 76
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYD-------VSQGR--RELDWLARHRIAQG 258
IV V D ++V+E+ ++G L L +++G EL IAQ
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAG- 317
IA+G+ YL H +HRD+ N L+ +++ +I +FG+++ + T + + G
Sbjct: 137 IAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDV----YSTDYYRVGGH 189
Query: 318 ---TVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++ PE + D++S GV+L + GK P
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
++ I L YL H +IHRD++P+N+L+D+ + ++ +FG++ R+ D + +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS- 184
Query: 314 SLAGTVGYIAPE----CHQTVALSDT-CDIYSFGVLLAVLVIGKFP 354
AG Y+APE T D D++S G+ L L G+FP
Sbjct: 185 --AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH--RIAQGIASGLEYLHMSHRPRII 275
+ C L++ E G L + Q R + + R I + I + +++LH SH I
Sbjct: 98 KRCLLIIMECMEGGEL----FSRIQERGDQAFTEREAAEIMRDIGTAIQFLH-SHN--IA 150
Query: 276 HRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
HRD++P N+L + D ++++FG AK +T + T Y+APE
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKY 206
Query: 333 SDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKE 364
+CD++S GV++ +L+ G FP F+ +T +
Sbjct: 207 DKSCDMWSLGVIMYILLCG-FPP--FYSNTGQ 235
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAK--RIPDGHTRTTT 312
I +EYLH ++HRD++P+N+L D+ RI +FG AK R +G T
Sbjct: 125 ITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 313 WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ T ++APE + CDI+S GVLL + G P
Sbjct: 182 Y----TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
+IA I LE+LH + +IHRD++P+NVLI+ + ++ +FG++ + D +
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID- 169
Query: 314 SLAGTVGYIA-----PECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF---FQHTKEM 365
AG Y+A PE +Q S DI+S G+ + L I +FP D + FQ K++
Sbjct: 170 --AGCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 20 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 79
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 80 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 132
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 189
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 19/150 (12%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH--RIAQGIASGLEYLHMSHRPRII 275
+ C L++ E G L + Q R + + R I + I + +++LH SH I
Sbjct: 79 KRCLLIIMECMEGGEL----FSRIQERGDQAFTEREAAEIMRDIGTAIQFLH-SHN--IA 131
Query: 276 HRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVAL 332
HRD++P N+L + D ++++FG AK +T + T Y+APE
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKY 187
Query: 333 SDTCDIYSFGVLLAVLVIGKFPSDDFFQHT 362
+CD++S GV++ +L+ G FP F+ +T
Sbjct: 188 DKSCDMWSLGVIMYILLCG-FPP--FYSNT 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---AQG 258
++ H +V L + + LV+EF +G L D L R + A +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 111
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + D ++T GT
Sbjct: 112 VCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GT 164
Query: 319 ---VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDD 357
V + +PE S D++SFGVL+ V GK P ++
Sbjct: 165 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 20 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 79
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 80 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 132
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 189
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ T S GTV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ T S GTV Y+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ T S GTV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ +G L+D L + R LD + I G+EYL R +HRD+
Sbjct: 87 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 140
Query: 283 NVLIDDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
N+L++ + +I++FGLAK +P D + + APE S D++SF
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
Query: 342 GVLLAVL 348
GV+L L
Sbjct: 201 GVVLYEL 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIK-KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM 215
G+ G+V K + A++I+ K E L +++I EI+ H IV LL
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI--EIL--ATCDHPYIVKLLGAY 77
Query: 216 VRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRII 275
++ EF G++ I+ ++ +G L +I LE L+ H RII
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 276 HRDIQPANVLIDDDMEARISEFGL-AKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
HRD++ NVL+ + + R+++FG+ AK + R S GT ++APE + D
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD---SFIGTPYWMAPEVVMCETMKD 188
Query: 335 T-----CDIYSFGVLL 345
T DI+S G+ L
Sbjct: 189 TPYDYKADIWSLGITL 204
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 157 GSSGRVITIKKIIQPLKSGAELIK-KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARM 215
G+ G+V K + A++I+ K E L +++I EI+ H IV LL
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI--EIL--ATCDHPYIVKLLGAY 85
Query: 216 VRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRII 275
++ EF G++ I+ ++ +G L +I LE L+ H RII
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 276 HRDIQPANVLIDDDMEARISEFGL-AKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
HRD++ NVL+ + + R+++FG+ AK + R S GT ++APE + D
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD---SFIGTPYWMAPEVVMCETMKD 196
Query: 335 T-----CDIYSFGVLL 345
T DI+S G+ L
Sbjct: 197 TPYDYKADIWSLGITL 212
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ T S GTV Y+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ T S GTV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 28/134 (20%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAKRIPD 305
IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K++
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 306 GHT--RTTTWSLAGTVGYIAPECHQTVA-------LSDTCDIYSFG-VLLAVLVIGKFPS 355
G + RT + +GT G+ APE + L+ + DI+S G V +L GK P
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 356 DDFFQHTKEMSLVQ 369
D ++++E ++++
Sbjct: 241 GD--KYSRESNIIR 252
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R D
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK 111
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-PDGHT 308
+ Q ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K + D +
Sbjct: 112 NIIELVHQ-VSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
V + APEC S D++SFGVL+
Sbjct: 168 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ T S GTV Y+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 131 RKCLLIVXECLDGGELFSRIQD--RGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHR 185
Query: 278 DIQPANVLIDDDMEA---RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L ++++FG AK ++ TT T Y+APE
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDK 242
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD +S GV+ +L+ G P
Sbjct: 243 SCDXWSLGVIXYILLCGYPP 262
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 39/269 (14%)
Query: 130 LEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHK 189
L ED++ + ++ G+VYKA+ +S V+ K+I K E L
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETS--VLAAAKVID---------TKSEEELEDY 81
Query: 190 MIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
M+ EI H NIV LL + ++ EF G++ ++ ++ +
Sbjct: 82 MV----EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
L +I L+ L+ H +IIHRD++ N+L D + ++++FG++ + +TR
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTR 187
Query: 310 TTTW--SLAGTVGYIAPECHQTVALSD-----TCDIYSFGVLLAVLVIGKFPSDDFFQHT 362
T S GT ++APE D D++S G+ L + + P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH------- 240
Query: 363 KEMSLVQWMRNVMTSENPNRAINSKLLGN 391
E++ ++ + + SE P A S+ N
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---AQG 258
++ H +V L + + LV+EF +G L D L R + A +
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 109
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + D ++T GT
Sbjct: 110 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GT 162
Query: 319 ---VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDD 357
V + +PE S D++SFGVL+ V GK P ++
Sbjct: 163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---AQG 258
++ H +V L + + LV+EF +G L D L R + A +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 111
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + D ++T GT
Sbjct: 112 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GT 164
Query: 319 ---VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDD 357
V + +PE S D++SFGVL+ V GK P ++
Sbjct: 165 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---AQG 258
++ H +V L + + LV+EF +G L D L R + A +
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 114
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + D ++T GT
Sbjct: 115 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GT 167
Query: 319 ---VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDD 357
V + +PE S D++SFGVL+ V GK P ++
Sbjct: 168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 24/130 (18%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAKRIPD 305
IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K++
Sbjct: 142 IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 306 GHT--RTTTWSLAGTVGYIAPECHQTVA---LSDTCDIYSFG-VLLAVLVIGKFPSDDFF 359
G R + +GT G+ APE + L+ + DI+S G V +L GK P D
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD-- 256
Query: 360 QHTKEMSLVQ 369
++++E ++++
Sbjct: 257 KYSRESNIIR 266
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 159 SGRVITIKKIIQP---LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLL 212
SG+ +KK + L+ A+ IKK + + I E+ +++H N++ L
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 213 ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRP 272
+ +L+ E G L D L + + L + I +G+ YLH
Sbjct: 81 EVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--- 133
Query: 273 RIIHRDIQPANVLIDD----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQ 328
+I H D++P N+++ D +I +FGLA +I G+ + GT ++APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVN 190
Query: 329 TVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLV 368
L D++S GV+ +L+ G P F TK+ +L
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETLA 227
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
IQI + + V++R + R R LV E+ +G L+D L + R LD
Sbjct: 62 IQILKALHSDFIVKYRGVSYGPGRQSLR----LVMEYLPSGCLRDFL---QRHRARLDAS 114
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTR 309
+ I G+EYL R +HRD+ N+L++ + +I++FGLAK +P D
Sbjct: 115 RLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 171
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLV 349
+ + APE S D++SFGV+L L
Sbjct: 172 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---AQG 258
++ H +V L + + LV+EF +G L D L R + A +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 131
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + D ++T GT
Sbjct: 132 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GT 184
Query: 319 ---VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDD 357
V + +PE S D++SFGVL+ V GK P ++
Sbjct: 185 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R D
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK 469
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ Q ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 470 NIIELVHQ-VSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 526 YKAQTHGKW----PVKWYAPECINYYKFSSKSDVWSFGVLM 562
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 137 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 191 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 135 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 188
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 189 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 225
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 138 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS 191
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 192 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
++ EII +RH NIV ++ +V E+ G L + + + GR D A
Sbjct: 60 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 116
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKRIPDGHTR 309
R Q I SG+ Y H ++ HRD++ N L+D R I +FG +K
Sbjct: 117 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 169
Query: 310 TTTWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDD 357
+ S GT YIAPE D++S GV L V+++G +P +D
Sbjct: 170 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 26/191 (13%)
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQD----- 235
KD K Q +E++T ++H +IV D ++V+E+ ++G L
Sbjct: 54 KDPTLAARKDFQREAELLT--NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAH 111
Query: 236 -----ILYDVS--QGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
IL D Q + EL IA IASG+ YL H +HRD+ N L+
Sbjct: 112 GPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGA 168
Query: 289 DMEARISEFGLAKRIPDGHTRTTTWSLAG----TVGYIAPECHQTVALSDTCDIYSFGVL 344
++ +I +FG+++ + T + + G + ++ PE + D++SFGV+
Sbjct: 169 NLLVKIGDFGMSRDV----YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 224
Query: 345 L-AVLVIGKFP 354
L + GK P
Sbjct: 225 LWEIFTYGKQP 235
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 24/130 (18%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAKRIPD 305
IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K++
Sbjct: 142 IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 306 GHT--RTTTWSLAGTVGYIAPECHQTVA---LSDTCDIYSFG-VLLAVLVIGKFPSDDFF 359
G R + +GT G+ APE + L+ + DI+S G V +L GK P D
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD-- 256
Query: 360 QHTKEMSLVQ 369
++++E ++++
Sbjct: 257 KYSRESNIIR 266
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 137 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 191 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ E++ V + P + RM+ + +LV E G L L Q R D
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK 470
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK--RIPDGH 307
+ Q ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K R + +
Sbjct: 471 NIIELVHQ-VSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 308 TRTTT---WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ T W V + APEC S D++SFGVL+
Sbjct: 527 YKAQTHGKW----PVKWYAPECINYYKFSSKSDVWSFGVLM 563
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
F +EKI G VYKA +G V+ +KKI + D+E IR
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI-----------RLDTETEGVPSTAIR- 54
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
EI ++ H NIV LL + + LV+E + L+ + D S L + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFE-HVDQDLKKFM-DASA----LTGIPLPLI 108
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHE 166
Query: 316 AGTVGYIAPECHQTVALSDTC-DIYSFGVLLAVLVIGK--FPSD 356
T+ Y APE T DI+S G + A +V + FP D
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
IQI + + V++R + R R LV E+ +G L+D L + R LD
Sbjct: 63 IQILKALHSDFIVKYRGVSYGPGRQSLR----LVMEYLPSGCLRDFL---QRHRARLDAS 115
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTR 309
+ I G+EYL R +HRD+ N+L++ + +I++FGLAK +P D
Sbjct: 116 RLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 172
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLV 349
+ + APE S D++SFGV+L L
Sbjct: 173 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 138 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 191
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 192 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 141
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 142 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 195
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 196 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 232
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
++ EII +RH NIV ++ +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKRIPDGHTR 309
R Q I SG+ Y H ++ HRD++ N L+D R I++FG +K
Sbjct: 118 RFFFQQLI-SGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLH 170
Query: 310 TTTWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDD 357
+ S GT YIAPE D++S GV L V+++G +P +D
Sbjct: 171 SQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
++ EII +RH NIV ++ +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKRIPDGHTR 309
R Q I SG+ Y H ++ HRD++ N L+D R I +FG +K
Sbjct: 118 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 170
Query: 310 TTTWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDD 357
+ S GT YIAPE D++S GV L V+++G +P +D
Sbjct: 171 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 218 RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHR 277
R C L+V E G L + D +G + I + I ++YLH + I HR
Sbjct: 85 RKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 139
Query: 278 DIQPANVLIDD---DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
D++P N+L + ++++FG AK ++ T T Y+APE
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP---CYTPYYVAPEVLGPEKYDK 196
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
+CD++S GV++ +L+ G P
Sbjct: 197 SCDMWSLGVIMYILLCGYPP 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
IQI + + V++R + R R LV E+ +G L+D L + R LD
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLR----LVMEYLPSGCLRDFL---QRHRARLDAS 127
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP-DGHTR 309
+ I G+EYL R +HRD+ N+L++ + +I++FGLAK +P D
Sbjct: 128 RLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 184
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLV 349
+ + APE S D++SFGV+L L
Sbjct: 185 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
+ L+YL RIIHRD++P N+L+D+ I++F +A +P T+ TT +AGT
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT--MAGT 177
Query: 319 VGYIAPECHQT---VALSDTCDIYSFGVLLAVLVIGKFP 354
Y+APE + S D +S GV L+ G+ P
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 195
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDG---- 306
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + D
Sbjct: 196 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249
Query: 307 -HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
H +T V ++A E QT + D++SFGVLL
Sbjct: 250 VHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 286
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 195 SEIITAGQVRHRNIVPLLAR-MVRRDCD---LLVYEFRRNGSLQDILYDVSQGRRELDWL 250
+E+ +RH NI+ +A M R L+ + GSL D L + LD +
Sbjct: 80 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 134
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
+ RI IASGL +LH+ +P I HRD++ N+L+ + + I++ GLA
Sbjct: 135 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM--- 191
Query: 306 GHTRTTTW------SLAGTVGYIAPECHQTVALSDT------CDIYSFGVLL 345
H+++T GT Y+APE D DI++FG++L
Sbjct: 192 -HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 242
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 195 SEIITAGQVRHRNIVPLLAR-MVRRDCD---LLVYEFRRNGSLQDILYDVSQGRRELDWL 250
+E+ +RH NI+ +A M R L+ + GSL D L + LD +
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
+ RI IASGL +LH+ +P I HRD++ N+L+ + + I++ GLA
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM--- 162
Query: 306 GHTRTTTW------SLAGTVGYIAPECHQTVALSDT------CDIYSFGVLL 345
H+++T GT Y+APE D DI++FG++L
Sbjct: 163 -HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 159 SGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS--EIITAGQVRHRNIVPLLARMV 216
+G ++ IKKI EP + +R+ EI +H NI+ + +
Sbjct: 35 TGEIVAIKKI---------------EPFDKPLFALRTLREIKILKHFKHENIITIF-NIQ 78
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
R D F +Q+++ L+ I I L + + H +IH
Sbjct: 79 RPDS---FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 277 RDIQPANVLIDDDMEARISEFGLAKRI---------PDGHTRTTTWSLAGTVGYIAPECH 327
RD++P+N+LI+ + + ++ +FGLA+ I P G T +A T Y APE
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA-TRWYRAPEVM 194
Query: 328 QTVA-LSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T A S D++S G +LA L + + FP D+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 195 SEIITAGQVRHRNIVPLLAR-MVRRDCD---LLVYEFRRNGSLQDILYDVSQGRRELDWL 250
+E+ +RH NI+ +A M R L+ + GSL D L + LD +
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
+ RI IASGL +LH+ +P I HRD++ N+L+ + + I++ GLA
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM--- 162
Query: 306 GHTRTTTW------SLAGTVGYIAPECHQTVALSDT------CDIYSFGVLL 345
H+++T GT Y+APE D DI++FG++L
Sbjct: 163 -HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 172 LKSGAELIKKDSEPLHHKMIQ---IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFR 228
L+ A+ IKK + + I E+ +++H N++ L + +L+ E
Sbjct: 37 LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELV 96
Query: 229 RNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD 288
G L D L + + L + I +G+ YLH +I H D++P N+++ D
Sbjct: 97 AGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLD 149
Query: 289 ----DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVL 344
+I +FGLA +I G+ + GT ++APE L D++S GV+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 345 LAVLVIGKFPSDDFFQHTKEMSL 367
+L+ G P F TK+ +L
Sbjct: 207 TYILLSGASP---FLGDTKQETL 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 26/192 (13%)
Query: 169 IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVY 225
I+ LK G E K D+E E++ Q+ H+ P + R++ + + +LV
Sbjct: 42 IKVLKQGTE--KADTE-----------EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM 88
Query: 226 EFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL 285
E G L L R E+ + ++ G++YL + +HRD+ NVL
Sbjct: 89 EMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVL 142
Query: 286 IDDDMEARISEFGLAKRIPDGHTRTTTWSLAG--TVGYIAPECHQTVALSDTCDIYSFGV 343
+ + A+IS+FGL+K + + T S AG + + APEC S D++S+GV
Sbjct: 143 LVNRHYAKISDFGLSKALGADDSYYTARS-AGKWPLKWYAPECINFRKFSSRSDVWSYGV 201
Query: 344 -LLAVLVIGKFP 354
+ L G+ P
Sbjct: 202 TMWEALSYGQKP 213
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 24/234 (10%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEI-ITAGQVRHR 206
G+V +A G +K ++ LKS A +K++ + SE+ I + +H
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 110
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
NIV LL L++ E+ G L + L S R L+ IA S + L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTLSTRDLL 167
Query: 267 HMSHR----------PRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLA 316
H S + IHRD+ NVL+ + A+I +FGLA+ I + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQ 369
V ++APE + D++S+G+LL + +G P ++K LV+
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 18/153 (11%)
Query: 203 VRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
++H +V L A +V ++ ++ EF GSL D L ++ L L + IA G
Sbjct: 234 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEG 290
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
+ ++ + IHRD++ AN+L+ + +I++FGLA+ G W+
Sbjct: 291 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV---GAKFPIKWT-------- 336
Query: 323 APECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
APE + + D++SFG+LL ++ G+ P
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEI-ITAGQVRHR 206
G+V +A G +K ++ LKS A +K++ + SE+ I + +H
Sbjct: 52 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 102
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR------RELDWLARHRIAQGIA 260
NIV LL L++ E+ G L + L ++ R L+ + +A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ +L + IHRD+ NVL+ + A+I +FGLA+ I + + V
Sbjct: 163 QGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQ 369
++APE + D++S+G+LL + +G P ++K LV+
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 159 SGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS--EIITAGQVRHRNIVPLLARMV 216
+G ++ IKKI EP + +R+ EI +H NI+ + +
Sbjct: 35 TGEIVAIKKI---------------EPFDKPLFALRTLREIKILKHFKHENIITIF-NIQ 78
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
R D F +Q+++ L+ I I L + + H +IH
Sbjct: 79 RPDS---FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 277 RDIQPANVLIDDDMEARISEFGLAKRI---------PDGHTRTTTWSLAGTVGYIAPECH 327
RD++P+N+LI+ + + ++ +FGLA+ I P G T +A T Y APE
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA-TRWYRAPEVM 194
Query: 328 QTVA-LSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T A S D++S G +LA L + + FP D+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEI-ITAGQVRHR 206
G+V +A G +K ++ LKS A +K++ + SE+ I + +H
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 110
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGR------RELDWLARHRIAQGIA 260
NIV LL L++ E+ G L + L ++ R L+ + +A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ +L + IHRD+ NVL+ + A+I +FGLA+ I + + V
Sbjct: 171 QGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQ 369
++APE + D++S+G+LL + +G P ++K LV+
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
V E+ G D+++ + + R+ + AR A+ I+ L YLH II+RD++
Sbjct: 129 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 181
Query: 282 ANVLIDDDMEARISEFGLAKR-IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYS 340
NVL+D + +++++G+ K + G T +T GT YIAPE + + D ++
Sbjct: 182 DNVLLDSEGHIKLTDYGMCKEGLRPGDTTST---FCGTPNYIAPEILRGEDYGFSVDWWA 238
Query: 341 FGVLLAVLVIGKFPSD 356
GVL+ ++ G+ P D
Sbjct: 239 LGVLMFEMMAGRSPFD 254
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
++ EII +RH NIV ++ +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKRIPDGHTR 309
R Q I SG+ Y H ++ HRD++ N L+D R I FG +K
Sbjct: 118 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLH 170
Query: 310 TTTWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDD 357
+ S GT YIAPE D++S GV L V+++G +P +D
Sbjct: 171 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
I + + + Y+H + I HRD++P+N+L+D + ++S+FG ++ + D + +
Sbjct: 156 IIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS--- 210
Query: 315 LAGTVGYIAPE--CHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMR 372
GT ++ PE +++ DI+S G+ L V+ P + ++SLV+
Sbjct: 211 -RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP------FSLKISLVELFN 263
Query: 373 NVMT 376
N+ T
Sbjct: 264 NIRT 267
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ T S G V Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
LE +H H+ I+H D++PAN LI D M ++ +FG+A ++ S GTV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 323 APECHQTVALS-----------DTCDIYSFGVLLAVLVIGKFP 354
PE + ++ S D++S G +L + GK P
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 134 DYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQI 193
DY+ LE++ S G V++ + ++GRV K I P PL +
Sbjct: 51 DYYDILEELGSGAFGVVHRC-VEKATGRVFVAKFINTPY------------PL--DKYTV 95
Query: 194 RSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH 253
++EI Q+ H ++ L + +L+ EF G L D + E + +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM 155
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA--RISEFGLAKRI-PDGHTRT 310
R A GL+++H I+H DI+P N++ + + +I +FGLA ++ PD +
Sbjct: 156 RQA---CEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TT T + APE + D+++ GVL VL+ G P
Sbjct: 210 TT----ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+VYKA+ +S V+ K+I K E L M+ EI H N
Sbjct: 24 GKVYKAQNKETS--VLAAAKVID---------TKSEEELEDYMV----EIDILASCDHPN 68
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
IV LL + ++ EF G++ ++ ++ + L +I L+ L+
Sbjct: 69 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------LTESQIQVVCKQTLDALN 122
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW---SLAGTVGYIAP 324
H +IIHRD++ N+L D + ++++FG++ + +TRT S GT ++AP
Sbjct: 123 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTRTXIQRRDSFIGTPYWMAP 178
Query: 325 ECHQTVALSD-----TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSEN 379
E D D++S G+ L + + P E++ ++ + + SE
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH-------HELNPMRVLLKIAKSEP 231
Query: 380 PNRAINSKLLGN 391
P A S+ N
Sbjct: 232 PTLAQPSRWSSN 243
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 195 SEIITAGQVRHRNIVPLLAR-MVRRDCD---LLVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A M R+ L+ + +GSL D L R+ L+
Sbjct: 51 TEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPH 105
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
R+A A GL +LH+ +P I HRD + NVL+ +++ I++ GLA
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 306 G--HTRTTTWSLAGTVGYIAPECHQTVALSDT------CDIYSFGVLL 345
G + GT Y+APE +D DI++FG++L
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVL 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
V E+ G D+++ + + R+ + AR A+ I+ L YLH II+RD++
Sbjct: 97 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERG---IIYRDLKL 149
Query: 282 ANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NVL+D + +++++G+ K TT GT YIAPE + + D ++
Sbjct: 150 DNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 207
Query: 342 GVLLAVLVIGKFPSD 356
GVL+ ++ G+ P D
Sbjct: 208 GVLMFEMMAGRSPFD 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 159 SGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS--EIITAGQVRHRNIVPLLARMV 216
+G ++ IKKI EP + +R+ EI +H NI+ + +
Sbjct: 35 TGEIVAIKKI---------------EPFDKPLFALRTLREIKILKHFKHENIITIF-NIQ 78
Query: 217 RRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIH 276
R D F +Q+++ L+ I I L + + H +IH
Sbjct: 79 RPDS---FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 277 RDIQPANVLIDDDMEARISEFGLAKRI---------PDGHTRTTTWSLAGTVGYIAPECH 327
RD++P+N+LI+ + + ++ +FGLA+ I P G ++ T Y APE
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ-QSGMVEFVATRWYRAPEVM 194
Query: 328 QTVA-LSDTCDIYSFGVLLAVLVIGK--FPSDDF 358
T A S D++S G +LA L + + FP D+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
++ EII +RH NIV ++ ++ E+ G L + + + GR D A
Sbjct: 62 NVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI--CNAGRFSEDE-A 118
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKRIPDGHTR 309
R Q + SG+ Y H +I HRD++ N L+D R I +FG +K
Sbjct: 119 RF-FFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 171
Query: 310 TTTWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDD 357
+ S GT YIAPE D++S GV L V+++G +P +D
Sbjct: 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 189 KMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELD 248
K+ ++ EI +V H NI+ +L + LV E ++GS D+ + + R +
Sbjct: 72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDE 129
Query: 249 WLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHT 308
LA + Q + S + YL + IIHRDI+ N++I +D ++ +FG A + G
Sbjct: 130 PLASYIFRQ-LVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK- 184
Query: 309 RTTTWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFP 354
++ GT+ Y APE +++S GV L LV + P
Sbjct: 185 --LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 45/229 (19%)
Query: 148 GEVYKAE----LPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQV 203
G+V+ AE LP ++ +K LK +E ++D Q +E++T +
Sbjct: 32 GKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQD--------FQREAELLT--ML 77
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY-------------DVSQGRRELDWL 250
+H++IV L+V+E+ R+G L L DV+ G L L
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
+A +A+G+ YL H +HRD+ N L+ + +I +FG+++ I T
Sbjct: 138 LA--VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDI----YST 188
Query: 311 TTWSLAG----TVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + G + ++ PE + D++SFGV+L + GK P
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 45/229 (19%)
Query: 148 GEVYKAE----LPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQV 203
G+V+ AE LP ++ +K LK +E ++D Q +E++T +
Sbjct: 26 GKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQD--------FQREAELLT--ML 71
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY-------------DVSQGRRELDWL 250
+H++IV L+V+E+ R+G L L DV+ G L L
Sbjct: 72 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
+A +A+G+ YL H +HRD+ N L+ + +I +FG+++ I T
Sbjct: 132 LA--VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDI----YST 182
Query: 311 TTWSLAG----TVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + G + ++ PE + D++SFGV+L + GK P
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 130 LEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHK 189
L ED++ + ++ G+VYKA+ +S V+ K+I K E L
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETS--VLAAAKVID---------TKSEEELEDY 81
Query: 190 MIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
M+ EI H NIV LL + ++ EF G++ ++ ++ +
Sbjct: 82 MV----EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
L +I L+ L+ H +IIHRD++ N+L D + ++++FG++ + +TR
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTR 187
Query: 310 TTTW--SLAGTVGYIAPECHQTVALSD-----TCDIYSFGVLL 345
S GT ++APE D D++S G+ L
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 45/229 (19%)
Query: 148 GEVYKAE----LPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQV 203
G+V+ AE LP ++ +K LK +E ++D Q +E++T +
Sbjct: 55 GKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQD--------FQREAELLT--ML 100
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY-------------DVSQGRRELDWL 250
+H++IV L+V+E+ R+G L L DV+ G L L
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
+A +A+G+ YL H +HRD+ N L+ + +I +FG+++ I T
Sbjct: 161 LA--VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDI----YST 211
Query: 311 TTWSLAG----TVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ + G + ++ PE + D++SFGV+L + GK P
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 202 QVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---AQG 258
++ H +V L + + LV EF +G L D L R + A +
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 112
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
+ G+ YL + +IHRD+ N L+ ++ ++S+FG+ + + D ++T GT
Sbjct: 113 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GT 165
Query: 319 ---VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDD 357
V + +PE S D++SFGVL+ V GK P ++
Sbjct: 166 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
V E+ G D+++ + + R+ + AR A+ I+ L YLH II+RD++
Sbjct: 82 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERG---IIYRDLKL 134
Query: 282 ANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NVL+D + +++++G+ K TT GT YIAPE + + D ++
Sbjct: 135 DNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 192
Query: 342 GVLLAVLVIGKFPSD 356
GVL+ ++ G+ P D
Sbjct: 193 GVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQP 281
V E+ G D+++ + + R+ + AR A+ I+ L YLH II+RD++
Sbjct: 86 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERG---IIYRDLKL 138
Query: 282 ANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSF 341
NVL+D + +++++G+ K TT GT YIAPE + + D ++
Sbjct: 139 DNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 196
Query: 342 GVLLAVLVIGKFPSD 356
GVL+ ++ G+ P D
Sbjct: 197 GVLMFEMMAGRSPFD 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 13/114 (11%)
Query: 270 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT 329
H+ +HRDI+P NVL+D + R+++FG ++ D T ++ ++ GT YI+PE Q
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQA 266
Query: 330 V-----ALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSE 378
+ CD +S GV + ++ G+ P F+ SLV+ +M E
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETP---FYAE----SLVETYGKIMNHE 313
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 13/114 (11%)
Query: 270 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQT 329
H+ +HRDI+P NVL+D + R+++FG ++ D T ++ ++ GT YI+PE Q
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQA 250
Query: 330 V-----ALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSE 378
+ CD +S GV + ++ G+ P F+ SLV+ +M E
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETP---FYAE----SLVETYGKIMNHE 297
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEI-ITAGQVRHR 206
G+V +A G +K ++ LKS A +K++ + SE+ I + +H
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 110
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
NIV LL L++ E+ G L + L E + H + ++S + L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS-RDLL 169
Query: 267 HMSHR----------PRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLA 316
H S + IHRD+ NVL+ + A+I +FGLA+ I + +
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQ 369
V ++APE + D++S+G+LL + +G P ++K LV+
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQ-DILYDVSQGRRELDWLA 251
++ E ++H +IV LL +V+EF L +I+ G + +A
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHT 308
H + Q LE L H IIHRD++P VL+ ++ ++ FG+A ++ G +
Sbjct: 135 SHYMRQI----LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GES 188
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKE 364
GT ++APE + D++ GV+L +L+ G P F TKE
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP----FYGTKE 240
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQ-DILYDVSQGRRELDWLA 251
++ E ++H +IV LL +V+EF L +I+ G + +A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHT 308
H + Q LE L H IIHRD++P VL+ ++ ++ FG+A ++ G +
Sbjct: 133 SHYMRQI----LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GES 186
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKE 364
GT ++APE + D++ GV+L +L+ G P F TKE
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP----FYGTKE 238
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 28/134 (20%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAKRIPD 305
IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K++
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 306 GHT--RTTTWSLAGTVGYIAPECHQTVA-------LSDTCDIYSFG-VLLAVLVIGKFPS 355
G R + +GT G+ APE + L+ + DI+S G V +L GK P
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 356 DDFFQHTKEMSLVQ 369
D ++++E ++++
Sbjct: 241 GD--KYSRESNIIR 252
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 179
Query: 319 VGYIAPECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
Y+APE +V + D +S GV+L + + G P F +H ++SL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 228
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 178
Query: 319 VGYIAPECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
Y+APE +V + D +S GV+L + + G P F +H ++SL
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 227
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 179
Query: 319 VGYIAPECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
Y+APE +V + D +S GV+L + + G P F +H ++SL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 228
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 179
Query: 319 VGYIAPECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
Y+APE +V + D +S GV+L + + G P F +H ++SL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 228
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
+IA I LE+LH + +IHRD++P+NVLI+ + + +FG++ + D +
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 314 SLAGTVGYIA-----PECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDF---FQHTKEM 365
AG Y A PE +Q S DI+S G+ L I +FP D + FQ K++
Sbjct: 197 --AGCKPYXAPERINPELNQK-GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 251
++ EII +RH NIV ++ +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 252 RHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKRIPDGHTR 309
R Q I SG+ Y H ++ HRD++ N L+D R I FG +K
Sbjct: 118 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLH 170
Query: 310 TTTWSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGKFPSDD 357
+ GT YIAPE D++S GV L V+++G +P +D
Sbjct: 171 SQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 185
Query: 319 VGYIAPECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
Y+APE +V + D +S GV+L + + G P F +H ++SL
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 223 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQ 280
+V E+ G L +++ YDV + W AR A+ + + L H IHRD++
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEK-----W-ARFYTAEVVLA----LDAIHSMGFIHRDVK 200
Query: 281 PANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWSLAGTVGYIAPECHQTVA----LSDT 335
P N+L+D ++++FG ++ +G R T GT YI+PE ++
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 336 CDIYSFGVLLAVLVIGKFP 354
CD +S GV L +++G P
Sbjct: 259 CDWWSVGVFLYEMLVGDTP 277
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEV+ SGR+ ++ +KS E + D L K +Q E Q H N
Sbjct: 128 GEVF-------SGRLRADNTLVA-VKSCRETLPPD---LKAKFLQ---EARILKQYSHPN 173
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
IV L+ ++ +V E + G L ++G R L ++ A+G+EYL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQMVGDAAAGMEYLE 230
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH 327
IHRD+ N L+ + +IS+FG+++ DG + V + APE
Sbjct: 231 SKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 328 QTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF-QHTKEM 365
S D++SFG+LL +G P + Q T+E
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 188 HKMIQIRSEIITAGQVR-HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRE 246
H ++ E+ T Q + ++NI+ L+ LV+E + GS IL + Q ++
Sbjct: 52 HSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHI-QKQKH 107
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDME---ARISEF--GLAK 301
+ R+ + +A+ L++LH I HRD++P N+L + + +I +F G
Sbjct: 108 FNEREASRVVRDVAAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGM 164
Query: 302 RIPDGHTRTTTWSL---AGTVGYIAPE-----CHQTVALSDTCDIYSFGVLLAVLVIGKF 353
++ + T TT L G+ Y+APE Q CD++S GV+L +++ G
Sbjct: 165 KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
Query: 354 P 354
P
Sbjct: 225 P 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 147 NGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEII-TAGQVRH 205
N E+ K G+ G+V ++KI SG D+ L+ + ++ I+ A H
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKI-----SG-----HDTGKLYAMKVLKKATIVQKAKTTEH 104
Query: 206 RNIVPLLARMVRRDCDLLV--YEFRRNGSLQDILYDVSQGRRELDWLARHRIAQG----- 258
+ +R+ L+ Y F+ L IL ++ G R R +
Sbjct: 105 TRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY 164
Query: 259 ---IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
I LE+LH + II+RDI+ N+L+D + +++FGL+K T +
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDF 220
Query: 316 AGTVGYIAPECHQT--VALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRN 373
GT+ Y+AP+ + D +S GVL+ L+ G P F ++ S + R
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP---FTVDGEKNSQAEISRR 277
Query: 374 VMTSENP 380
++ SE P
Sbjct: 278 ILKSEPP 284
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 121 LIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIK 180
LI E+DL LEK + G V + E SG+ +++ + +K
Sbjct: 14 LIGEKDLRLLEK---------LGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLK 55
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
D M E+ + HRN++ L ++ + V E GSL D L
Sbjct: 56 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK- 113
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
QG L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL
Sbjct: 114 HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 168
Query: 301 KRIP--DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ +P D H + APE +T S D + FGV L
Sbjct: 169 RALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + ++ H+N
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKLNHQN 95
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 208
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + ++ H+N
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKLNHQN 109
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 222
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 223 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQ 280
+V E+ G L +++ YDV + W AR A+ + + L H IHRD++
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEK-----W-ARFYTAEVVLA----LDAIHSMGFIHRDVK 195
Query: 281 PANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWSLAGTVGYIAPECHQTVA----LSDT 335
P N+L+D ++++FG ++ +G R T GT YI+PE ++
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 336 CDIYSFGVLLAVLVIGKFP 354
CD +S GV L +++G P
Sbjct: 254 CDWWSVGVFLYEMLVGDTP 272
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 304
Query: 319 VGYIAPECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
Y+APE +V + D +S GV+L + + G P F +H ++SL
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 353
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 223 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQ 280
+V E+ G L +++ YDV + W AR A+ + + L H IHRD++
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEK-----W-ARFYTAEVVLA----LDAIHSMGFIHRDVK 200
Query: 281 PANVLIDDDMEARISEFGLAKRI-PDGHTRTTTWSLAGTVGYIAPECHQTVA----LSDT 335
P N+L+D ++++FG ++ +G R T GT YI+PE ++
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 336 CDIYSFGVLLAVLVIGKFP 354
CD +S GV L +++G P
Sbjct: 259 CDWWSVGVFLYEMLVGDTP 277
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 71 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 121
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 265 YLHMSHRPRIIHRDIQPANVLID---DDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 182 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 234
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 272
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT 318
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 318
Query: 319 VGYIAPECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
Y+APE +V + D +S GV+L + + G P F +H ++SL
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 367
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEV+ SGR+ ++ +KS E + D L K +Q E Q H N
Sbjct: 128 GEVF-------SGRLRADNTLVA-VKSCRETLPPD---LKAKFLQ---EARILKQYSHPN 173
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
IV L+ ++ +V E + G L ++G R L ++ A+G+EYL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQMVGDAAAGMEYLE 230
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECH 327
IHRD+ N L+ + +IS+FG+++ DG + V + APE
Sbjct: 231 SKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 328 QTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF-QHTKEM 365
S D++SFG+LL +G P + Q T+E
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 11/107 (10%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD---GHTRTTTWSL 315
I GL+Y+H ++ ++HRD++P+N+LI+ + +I +FGLA RI D HT T +
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLA-RIADPEHDHTGFLTEXV 208
Query: 316 AGTVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
A T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 209 A-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 109
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 222
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 121 LIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIK 180
LI E+DL LEK + G V + E SG+ +++ + +K
Sbjct: 4 LIGEKDLRLLEK---------LGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLK 45
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
D M E+ + HRN++ L ++ + V E GSL D L
Sbjct: 46 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK- 103
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
QG L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL
Sbjct: 104 HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 158
Query: 301 KRIP--DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ +P D H + APE +T S D + FGV L
Sbjct: 159 RALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 39/269 (14%)
Query: 130 LEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHK 189
L ED++ + ++ G+VYKA+ +S V+ K+I K E L
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETS--VLAAAKVID---------TKSEEELEDY 81
Query: 190 MIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 249
M+ EI H NIV LL + ++ EF G++ ++ ++ +
Sbjct: 82 MV----EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
L +I L+ L+ H +IIHRD++ N+L D + ++++FG++ + +TR
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTR 187
Query: 310 TTTW--SLAGTVGYIAPECHQTVALSD-----TCDIYSFGVLLAVLVIGKFPSDDFFQHT 362
GT ++APE D D++S G+ L + + P
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH------- 240
Query: 363 KEMSLVQWMRNVMTSENPNRAINSKLLGN 391
E++ ++ + + SE P A S+ N
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 121 LIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIK 180
LI E+DL LEK + G V + E SG+ +++ + +K
Sbjct: 8 LIGEKDLRLLEK---------LGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLK 49
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
D M E+ + HRN++ L ++ + V E GSL D L
Sbjct: 50 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK- 107
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
QG L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL
Sbjct: 108 HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 162
Query: 301 KRIP--DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ +P D H + APE +T S D + FGV L
Sbjct: 163 RALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 51 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 101
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 162 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 214
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 252
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 135
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVG 320
YL +H IHRDI N L+ A+I +FG+A+ I G+ R ++ V
Sbjct: 196 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML-PVK 251
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
++ PE + D +SFGVLL + +G P
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 94
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 207
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCD----LLVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A ++ L+ ++ NGSL D L + LD
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAK 134
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLA-KRIP 304
+ ++A SGL +LH +P I HRD++ N+L+ + I++ GLA K I
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 305 D-GHTRTTTWSLAGTVGYIAPEC---------HQTVALSDTCDIYSFGVLL 345
D + GT Y+ PE Q+ ++ D+YSFG++L
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA---DMYSFGLIL 242
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 61 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 111
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 172 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 224
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 262
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 94
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 207
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 121 LIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIK 180
LI E+DL LEK + G V + E SG+ +++ + +K
Sbjct: 14 LIGEKDLRLLEK---------LGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLK 55
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
D M E+ + HRN++ L ++ + V E GSL D L
Sbjct: 56 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK- 113
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
QG L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL
Sbjct: 114 HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 168
Query: 301 KRIP--DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ +P D H + APE +T S D + FGV L
Sbjct: 169 RALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 62 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 112
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIP-DGHTRTTTWSLAGTVG 320
YL +H IHRDI N L+ A+I +FG+A+ I G+ R ++ V
Sbjct: 173 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML-PVK 228
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
++ PE + D +SFGVLL + +G P
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 95
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 208
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 175 GAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQ 234
+++K+++ P ++ + SE QV H +++ L + LL+ E+ + GSL+
Sbjct: 57 AVKMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 235 DILYD---VSQG-----------------RRELDWLARHRIAQGIASGLEYLHMSHRPRI 274
L + V G R L A I+ G++YL ++
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKL 171
Query: 275 IHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
+HRD+ N+L+ + + +IS+FGL++ + + + V ++A E +
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 335 TCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGY 393
D++SFGVLL ++ +G P + L ++ E P+ N
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNP----YPGIPPERLFNLLKTGHRMERPD---------NCS 278
Query: 394 EEQMLLVLKIACFCTLDDPNKRPNSKDV 421
EE L+L+ C +P+KRP D+
Sbjct: 279 EEMYRLMLQ----CWKQEPDKRPVFADI 302
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 45/269 (16%)
Query: 175 GAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQ 234
+++K+++ P ++ + SE QV H +++ L + LL+ E+ + GSL+
Sbjct: 57 AVKMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 235 DILYD---VSQG-----------------RRELDWLARHRIAQGIASGLEYL-HMSHRPR 273
L + V G R L A I+ G++YL MS
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---- 170
Query: 274 IIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALS 333
++HRD+ N+L+ + + +IS+FGL++ + + + V ++A E +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 334 DTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSKLLGNG 392
D++SFGVLL ++ +G P + L ++ E P+ N
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNP----YPGIPPERLFNLLKTGHRMERPD---------NC 277
Query: 393 YEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
EE L+L+ C +P+KRP D+
Sbjct: 278 SEEMYRLMLQ----CWKQEPDKRPVFADI 302
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 26/192 (13%)
Query: 169 IQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMV---RRDCDLLVY 225
I+ LK G E K D+E E++ Q+ H+ P + R++ + + +LV
Sbjct: 368 IKVLKQGTE--KADTE-----------EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM 414
Query: 226 EFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL 285
E G L L R E+ + ++ G++YL + +HR++ NVL
Sbjct: 415 EMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVL 468
Query: 286 IDDDMEARISEFGLAKRIPDGHTRTTTWSLAG--TVGYIAPECHQTVALSDTCDIYSFGV 343
+ + A+IS+FGL+K + + T S AG + + APEC S D++S+GV
Sbjct: 469 LVNRHYAKISDFGLSKALGADDSYYTARS-AGKWPLKWYAPECINFRKFSSRSDVWSYGV 527
Query: 344 LL-AVLVIGKFP 354
+ L G+ P
Sbjct: 528 TMWEALSYGQKP 539
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVYSEQDE------LDFLMEALIISKFNHQN 109
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 222
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 121 LIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIK 180
LI E+DL LEK + G V + E SG+ +++ + +K
Sbjct: 4 LIGEKDLRLLEK---------LGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLK 45
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
D M E+ + HRN++ L ++ + V E GSL D L
Sbjct: 46 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK- 103
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
QG L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL
Sbjct: 104 HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 158
Query: 301 KRIP--DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ +P D H + APE +T S D + FGV L
Sbjct: 159 RALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 121 LIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIK 180
LI E+DL LEK + G V + E SG+ +++ + +K
Sbjct: 4 LIGEKDLRLLEK---------LGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLK 45
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
D M E+ + HRN++ L ++ + V E GSL D L
Sbjct: 46 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK- 103
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
QG L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL
Sbjct: 104 HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 158
Query: 301 KRIP--DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ +P D H + APE +T S D + FGV L
Sbjct: 159 RALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 36 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 86
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 147 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAML 199
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 175 GAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQ 234
+++K+++ P ++ + SE QV H +++ L + LL+ E+ + GSL+
Sbjct: 57 AVKMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 235 DILYD---VSQG-----------------RRELDWLARHRIAQGIASGLEYLHMSHRPRI 274
L + V G R L A I+ G++YL ++
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKL 171
Query: 275 IHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD 334
+HRD+ N+L+ + + +IS+FGL++ + + + V ++A E +
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 335 TCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGY 393
D++SFGVLL ++ +G P + L ++ E P+ N
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNP----YPGIPPERLFNLLKTGHRMERPD---------NCS 278
Query: 394 EEQMLLVLKIACFCTLDDPNKRPNSKDV 421
EE L+L+ C +P+KRP D+
Sbjct: 279 EEMYRLMLQ----CWKQEPDKRPVFADI 302
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 121 LIKEEDLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIK 180
LI E+DL LEK + G V + E SG+ +++ + +K
Sbjct: 8 LIGEKDLRLLEK---------LGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLK 49
Query: 181 KDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV 240
D M E+ + HRN++ L ++ + V E GSL D L
Sbjct: 50 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK- 107
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
QG L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL
Sbjct: 108 HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 162
Query: 301 KRIP--DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ +P D H + APE +T S D + FGV L
Sbjct: 163 RALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ ++ G ++ ++ L E+ + E + E + + H+N
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDE------LDFLMEALIISKFNHQN 95
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIAQGIASGLE 264
IV + ++ ++ E G L+ L + + LA +A+ IA G +
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 265 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRTTTWSLAGT--- 318
YL +H IHRDI N L+ A+I +FG+A+ I R + + G
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI----YRASYYRKGGCAML 208
Query: 319 -VGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
V ++ PE + D +SFGVLL + +G P
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 252
+R EI T +RH +V L + +++YEF G L + + D E + +
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 260
Query: 253 HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD--DMEARISEFGLAKRI-PDGHTR 309
R + GL ++H ++ +H D++P N++ E ++ +FGL + P +
Sbjct: 261 MR---QVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TT GT + APE + + D++S GVL +L+ G P
Sbjct: 315 VTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 38/226 (16%)
Query: 135 YFASLEK---IRSCWNGEVYKAELPGSS--GRVITIKKIIQPLKSGAELIKKDSEPLHHK 189
YF S+EK ++ G KA L S+ GR IK+I + + + K+ E
Sbjct: 19 YFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-----NISRMSSKERE----- 68
Query: 190 MIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSL-------QDILYDVSQ 242
+ R E+ ++H NIV +V ++ G L + +L+ Q
Sbjct: 69 --ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126
Query: 243 GRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR 302
LDW + +A L H +I+HRDI+ N+ + D ++ +FG+A+
Sbjct: 127 ---ILDWFVQICLA---------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV 174
Query: 303 IPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVL 348
+ T + GT Y++PE + ++ DI++ G +L L
Sbjct: 175 L--NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 193 IRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 252
+R EI T +RH +V L + +++YEF G L + + D E + +
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 154
Query: 253 HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDD--DMEARISEFGLAKRI-PDGHTR 309
R + GL ++H ++ +H D++P N++ E ++ +FGL + P +
Sbjct: 155 MR---QVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 208
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
TT GT + APE + + D++S GVL +L+ G P
Sbjct: 209 VTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLA--RMVRRDCDLLVYEFRRNGSLQDILYDVSQ--GRRE 246
+Q+R E ++ H+NIV L A +L+ EF GSL +L + S G E
Sbjct: 53 VQMR-EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL--IDDDMEA--RISEFGLAKR 302
++L + + + G+ +L + I+HR+I+P N++ I +D ++ ++++FG A+
Sbjct: 112 SEFLI---VLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 303 IPDGHTRTTTWSLAGTVGYIAPECHQTVAL--------SDTCDIYSFGVLLAVLVIGKFP 354
+ D SL GT Y+ P+ ++ L T D++S GV G P
Sbjct: 166 LEDDEQFV---SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Query: 355 SDDF 358
F
Sbjct: 223 FRPF 226
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 12/111 (10%)
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG-LAKRIPDGHT 308
+AR +A+ + + ++ +H H +HRDI+P N+L+D + R+++FG K + DG
Sbjct: 176 MARFYLAEMVIA-IDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231
Query: 309 RTTTWSLAGTVGYIAPECHQTVA-----LSDTCDIYSFGVLLAVLVIGKFP 354
+++ GT YI+PE Q + CD +S GV + ++ G+ P
Sbjct: 232 QSSV--AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ YL+ + +HRD+ N ++ D +I +FG+ + I + V
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL 345
++APE + + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ YL+ + +HRD+ N ++ D +I +FG+ + I + V
Sbjct: 138 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL 345
++APE + + + D++SFGV+L
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVL 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 192 QIRSEIITAGQVRHRNIVPLLARMVRRDCD--LLVYEFRRNGSLQDILYDVSQGRRELDW 249
++ EI ++RH+N++ L+ + + +V E+ G +Q++L V + R +
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPV-- 108
Query: 250 LARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTR 309
H + GLEYLH I+H+DI+P N+L+ +IS G+A+ +
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDT-----CDIYSFGVLLAVLVIGKFP 354
T + G+ + PE + DT DI+S GV L + G +P
Sbjct: 166 DTCRTSQGSPAFQPPEIANGL---DTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 47/260 (18%)
Query: 104 AAGRGGSRDRRPIIFSPLIKEEDLAFL----EKEDYFASLEKIRSCWNGEVYKAELPGSS 159
A GR GS +K+ D+A L + E F+ L +I G VY A +S
Sbjct: 31 AGGRAGS-----------LKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNS 79
Query: 160 GRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRD 219
V+ IKK+ K E K I E+ ++RH N + +R
Sbjct: 80 -EVVAIKKMSYSGKQSNE-----------KWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 127
Query: 220 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDI 279
LV E+ GS D+L + +E++ A + G GL YLH SH +IHRD+
Sbjct: 128 TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH-SHN--MIHRDV 180
Query: 280 QPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSD----- 334
+ N+L+ + ++ +FG A + + GT ++APE +A+ +
Sbjct: 181 KAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEV--ILAMDEGQYDG 232
Query: 335 TCDIYSFGVLLAVLVIGKFP 354
D++S G+ L K P
Sbjct: 233 KVDVWSLGITCIELAERKPP 252
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ YL+ + +HRD+ N ++ D +I +FG+ + I + V
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL 345
++APE + + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 141 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 139 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 130 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 231
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTTTWSLAGT 318
GL+Y+H + ++IHRD++P+N+L++++ E +I +FG+A+ + P H T +A T
Sbjct: 170 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-T 225
Query: 319 VGYIAPECHQTV-ALSDTCDIYSFGVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
Y APE ++ + D++S G + ++ + FP ++ + + +V
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV 278
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS-LAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T +
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 431 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 482
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 540 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 593
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 594 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 640
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 641 ELKAQLSTI 649
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTTTWSLAGT 318
GL+Y+H + ++IHRD++P+N+L++++ E +I +FG+A+ + P H T +A T
Sbjct: 171 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-T 226
Query: 319 VGYIAPECHQTV-ALSDTCDIYSFGVLLAVLVIGK--FPSDDFFQHTKEMSLV 368
Y APE ++ + D++S G + ++ + FP ++ + + +V
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV 279
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 45/249 (18%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEI-ITAGQVRHR 206
G+V +A G +K ++ LKS A +K++ + SE+ I + +H
Sbjct: 45 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 95
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQG-------- 258
NIV LL L++ E+ G L + L RR+ + + +A G
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFL------RRKAEAMLGPSLAPGQDPEGLDK 149
Query: 259 -----------------IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
+A G+ +L + IHRD+ NVL+ + A+I +FGLA+
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 302 RIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQ 360
I + + V ++APE + D++S+G+LL + +G P
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 266
Query: 361 HTKEMSLVQ 369
++K LV+
Sbjct: 267 NSKFYKLVK 275
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRT 310
RI + + S + Y H+ + HRD++P N L D ++ +FGLA R G
Sbjct: 127 RIMKDVLSAVAY---CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
T GT Y++P+ + + CD +S GV++ VL+ G P
Sbjct: 184 TK---VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 223
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 172 LKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCD-----LLVYE 226
LK + +K D+ ++ + SE H N++ LL + +++
Sbjct: 63 LKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP 121
Query: 227 FRRNGSLQD-ILYD-VSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANV 284
F + G L +LY + G + + + IA G+EYL S+R +HRD+ N
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL--SNR-NFLHRDLAARNC 178
Query: 285 LIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVL 344
++ DDM +++FGL+K+I G V +IA E + D+++FGV
Sbjct: 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 238
Query: 345 L 345
+
Sbjct: 239 M 239
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAG--- 317
G+ YL+ + +HRD+ N ++ D +I +FG+ + I T + G
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI----YETAYYRKGGKGL 193
Query: 318 -TVGYIAPECHQTVALSDTCDIYSFGVLL 345
V ++APE + + + D++SFGV+L
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKRIPDGHTRT 310
RI + + S + Y H+ + HRD++P N L D ++ +FGLA R G
Sbjct: 110 RIMKDVLSAVAY---CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
T GT Y++P+ + + CD +S GV++ VL+ G P
Sbjct: 167 TK---VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 206
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 47 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 105
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 106 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 206
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 239
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 54 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 105
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 106 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 163 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 216
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 217 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 263
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 264 ELKAQLSTI 272
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW-SLAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW-SLAG 317
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ H T
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 318 TVGYIAPECH-QTVALSDTCDIYSFGVLLAVLVIGK--FPSDDFF 359
T Y APE + + + DI+S G +LA ++ + FP +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 35 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 93
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 94 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 194
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ YL+ + +HRD+ N ++ D +I +FG+ + I + V
Sbjct: 140 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL 345
++APE + + + D++SFGV+L
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVL 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAG- 317
+A G+EYL + +HRD+ N ++D+ ++++FGLA+ I D +
Sbjct: 133 VARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 318 -TVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWM 371
V + A E QT + D++SFGVLL L+ P ++H L ++
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP---YRHIDPFDLTHFL 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 53 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 104
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 105 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 162 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 215
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 216 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 262
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 263 ELKAQLSTI 271
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 148 GEVYKAELPGSSGRVITIKKI-IQPLKSGAEL-------IKKDSEPLHHKMIQIRSEIIT 199
G+V+KA + GR + +K++ +Q + G L + + E H + ++ T
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 200 AGQVRHRNIVPLLARMVRRDCDLLVYEFRRNG----SLQDILYDVSQGRRELDWLARHRI 255
+ + L+ V +D + + G +++D+++
Sbjct: 85 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ---------------- 128
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ GL++LH SHR ++HRD++P N+L+ + ++++FGLA RI T S+
Sbjct: 129 ---LLRGLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALT--SV 179
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLLA 346
T+ Y APE + + D++S G + A
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 38 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 96
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 97 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 197
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 148 GEVYKAELPGSSGRVITIKKI-IQPLKSGAEL-------IKKDSEPLHHKMIQIRSEIIT 199
G+V+KA + GR + +K++ +Q + G L + + E H + ++ T
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 200 AGQVRHRNIVPLLARMVRRDCDLLVYEFRRNG----SLQDILYDVSQGRRELDWLARHRI 255
+ + L+ V +D + + G +++D+++
Sbjct: 85 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ---------------- 128
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ GL++LH SHR ++HRD++P N+L+ + ++++FGLA RI T S+
Sbjct: 129 ---LLRGLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALT--SV 179
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLLA 346
T+ Y APE + + D++S G + A
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPL----HHKMIQIRSEIITAGQV 203
G VY+A+L SG ++ IKK++Q G ++ + + H ++++R ++G+
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEK 88
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
+ + L+ V VY R+ S+ ++ L + + L
Sbjct: 89 KDEVYLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
Y+H I HRDI+P N+L+D D ++ +FG AK++ G S + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYR 189
Query: 323 APE-CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
APE + + D++S G +LA L++G+ FP D
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 53 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 111
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 112 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 212
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 39 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 97
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 98 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 198
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 42 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 100
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 101 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 201
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 46 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 104
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 105 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 205
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ YL+ + +HRD+ N ++ D +I +FG+ + I + V
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL 345
++APE + + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 46 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 104
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 105 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 205
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 148 GEVYKAELPGSSGRVITIKKI-IQPLKSGAEL-------IKKDSEPLHHKMIQIRSEIIT 199
G+V+KA + GR + +K++ +Q + G L + + E H + ++ T
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 200 AGQVRHRNIVPLLARMVRRDCDLLVYEFRRNG----SLQDILYDVSQGRRELDWLARHRI 255
+ + L+ V +D + + G +++D+++
Sbjct: 85 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ---------------- 128
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+ GL++LH SHR ++HRD++P N+L+ + ++++FGLA RI T S+
Sbjct: 129 ---LLRGLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALT--SV 179
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLLA 346
T+ Y APE + + D++S G + A
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQV-RHR 206
G+V A G S ++I+ ++ LK A+ ++++ + SE+ Q+ H
Sbjct: 59 GKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA---------LMSELKMMTQLGSHE 109
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ--GRRELDWLARHRI--------- 255
NIV LL L++E+ G L + L + E+++ + R+
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 256 --------AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGH 307
A +A G+E+L +HRD+ NVL+ +I +FGLA+ I
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 308 TRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V ++APE + D++S+G+LL
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 48 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 99
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 100 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 157 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 210
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 211 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 257
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 258 ELKAQLSTI 266
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 62 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 120
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 121 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 221
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPL----HHKMIQIRSEIITAGQV 203
G VY+A+L SG ++ IKK++Q G ++ + + H ++++R ++G+
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEK 88
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
+ + L+ V VY R+ S+ ++ L + + L
Sbjct: 89 KDEVYLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
Y+H I HRDI+P N+L+D D ++ +FG AK++ G S + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYR 189
Query: 323 APE-CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
APE + + D++S G +LA L++G+ FP D
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 56 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 107
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 108 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 165 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 218
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 219 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 265
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 266 ELKAQLSTI 274
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 79 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 130
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 131 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 188 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 241
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 242 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 288
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 289 ELKAQLSTI 297
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 103 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 160 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 213
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 214 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 260
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 261 ELKAQLSTI 269
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 103 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 160 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 213
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 214 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 260
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 261 ELKAQLSTI 269
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 68 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 127 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 227
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 150 VYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIV 209
VYKA ++ +++ IKKI K G KD ++ ++ EI ++ H NI+
Sbjct: 26 VYKAR-DKNTNQIVAIKKI----KLGHRSEAKDG--INRTALR---EIKLLQELSHPNII 75
Query: 210 PLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIAS--GLEYLH 267
LL + LV++F L+ I+ D S L H A + + GLEYLH
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLH 129
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI--PD---GHTRTTTWSLAGTVGYI 322
I+HRD++P N+L+D++ ++++FGLAK P+ H T W Y
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-------YR 179
Query: 323 APECHQTVALSDT-CDIYSFGVLLAVLVI 350
APE + D+++ G +LA L++
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLL 208
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLA--RMVRRDCDLLVYEFRRNGSLQDILYDVSQ--GRRE 246
+Q+R E ++ H+NIV L A +L+ EF GSL +L + S G E
Sbjct: 53 VQMR-EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 247 LDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVL--IDDDMEA--RISEFGLAKR 302
++L + + + G+ +L + I+HR+I+P N++ I +D ++ ++++FG A+
Sbjct: 112 SEFLI---VLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 303 IPDGHTRTTTWSLAGTVGYIAPECHQTVAL--------SDTCDIYSFGVLLAVLVIGKFP 354
+ D L GT Y+ P+ ++ L T D++S GV G P
Sbjct: 166 LEDDEQFVX---LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Query: 355 SDDF 358
F
Sbjct: 223 FRPF 226
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPL----HHKMIQIRSEIITAGQV 203
G VY+A+L SG ++ IKK++Q G ++ + + H ++++R ++G+
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEK 88
Query: 204 RHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGL 263
+ + L+ V VY R+ S+ ++ L + + L
Sbjct: 89 KDEVYLNLVLDYV----PATVYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 264 EYLHMSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYI 322
Y+H I HRDI+P N+L+D D ++ +FG AK++ G S + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYR 189
Query: 323 APE-CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
APE + + D++S G +LA L++G+ FP D
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 70 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 128
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 129 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 229
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 262
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 68 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 127 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 227
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ ++
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE--KKD 90
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+V L +V VY R+ S+ ++ L + + L Y+H
Sbjct: 91 VVYL--NLVLDYVPETVYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 223 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPA 282
LV E+ G L +L G R +AR +A+ + + + HR +HRDI+P
Sbjct: 138 LVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMA----IDSVHRLGYVHRDIKPD 191
Query: 283 NVLIDDDMEARISEFGLAKRI-PDGHTRTTTWSLAGTVGYIAPECHQTVALSDT------ 335
N+L+D R+++FG ++ DG R+ GT Y++PE Q V
Sbjct: 192 NILLDRCGHIRLADFGSCLKLRADGTVRSLV--AVGTPDYLSPEILQAVGGGPGTGSYGP 249
Query: 336 -CDIYSFGVLLAVLVIGKFP 354
CD ++ GV + G+ P
Sbjct: 250 ECDWWALGVFAYEMFYGQTP 269
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
H NI+ LL R L E+ +G+L D L + R L+ IA AS L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 140
Query: 265 YLHMSH-------------RPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
+ H + + IHRD+ N+L+ ++ A+I++FGL+ R + + + T
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-RGQEVYVKKT 199
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L V ++A E + D++S+GVLL ++ +G P
Sbjct: 200 MGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 72 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 130
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 131 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 231
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G VY+A+L SG ++ IKK++Q + ++ + H ++++R ++G+ +
Sbjct: 113 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 171
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 172 YLNLVLDYVPET----VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE- 325
I HRDI+P N+L+D D ++ +FG AK++ G S + Y APE
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 272
Query: 326 CHQTVALSDTCDIYSFGVLLAVLVIGK--FPSD 356
+ + D++S G +LA L++G+ FP D
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 305
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 31/248 (12%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 302 RIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQ 360
+ D T + ++APE + D++ FGV + +L+ G P FQ
Sbjct: 160 YMEDS-TXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 361 HTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKD 420
K ++ + N P + L L C+ DP++RP +
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 261
Query: 421 VRCMLSQI 428
++ LS I
Sbjct: 262 LKAQLSTI 269
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
H NI+ LL R L E+ +G+L D L + R L+ IA AS L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 130
Query: 265 YLHMSH-------------RPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
+ H + + IHRD+ N+L+ ++ A+I++FGL+ R + + + T
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-RGQEVYVKKT 189
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L V ++A E + D++S+GVLL ++ +G P
Sbjct: 190 MGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 431 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 482
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ ++ +FGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 539
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 540 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 593
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 594 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 640
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 641 ELKAQLSTI 649
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 38/176 (21%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDL----LVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 85 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVE 139
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA R
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR--- 196
Query: 306 GHTRTTTWSLA-----GTVGYIAPECHQTVALSDT-----------CDIYSFGVLL 345
+ T T +A GT Y+APE L D+ DIY+ G++
Sbjct: 197 HDSATDTIDIAPNHRVGTKRYMAPE-----VLDDSINMKHFESFKRADIYAMGLVF 247
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDL----LVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVE 100
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA R D
Sbjct: 101 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HD 159
Query: 306 GHTRTTTWS---LAGTVGYIAPECHQTVALSDT-----------CDIYSFGVLL 345
T T + GT Y+APE L D+ DIY+ G++
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPE-----VLDDSINMKHFESFKRADIYAMGLVF 208
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 223 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQ 280
+V E+ G L +++ YDV + W A+ A+ + + L H +IHRD++
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPE-----KW-AKFYTAEVVLA----LDAIHSMGLIHRDVK 201
Query: 281 PANVLIDDDMEARISEFGLAKRIPD-GHTRTTTWSLAGTVGYIAPECHQTVA----LSDT 335
P N+L+D ++++FG ++ + G T GT YI+PE ++
Sbjct: 202 PDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT--AVGTPDYISPEVLKSQGGDGYYGRE 259
Query: 336 CDIYSFGVLLAVLVIGKFP 354
CD +S GV L +++G P
Sbjct: 260 CDWWSVGVFLFEMLVGDTP 278
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDL----LVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 72 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVE 126
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA R D
Sbjct: 127 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HD 185
Query: 306 GHTRTTTWS---LAGTVGYIAPECHQTVALSDT-----------CDIYSFGVLL 345
T T + GT Y+APE L D+ DIY+ G++
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPE-----VLDDSINMKHFESFKRADIYAMGLVF 234
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 58 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 174
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 175 ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 30/198 (15%)
Query: 159 SGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRR 218
+G+++ IKK ++ +IKK I +R EI Q++H N+V LL R+
Sbjct: 27 TGQIVAIKKFLE--SEDDPVIKK---------IALR-EIRMLKQLKHPNLVNLLEVFRRK 74
Query: 219 DCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRD 278
LV+E+ +L+++ + +R + H + L+ ++ H+ IHRD
Sbjct: 75 RRLHLVFEY----CDHTVLHELDRYQRGV---PEHLVKSITWQTLQAVNFCHKHNCIHRD 127
Query: 279 IQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT--- 335
++P N+LI ++ +FG A R+ G + +A T Y +PE + + DT
Sbjct: 128 VKPENILITKHSVIKLCDFGFA-RLLTGPSDYYDDEVA-TRWYRSPE----LLVGDTQYG 181
Query: 336 --CDIYSFGVLLAVLVIG 351
D+++ G + A L+ G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDL----LVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 47 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVE 101
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA R D
Sbjct: 102 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HD 160
Query: 306 GHTRTTTWS---LAGTVGYIAPECHQTVALSDT-----------CDIYSFGVLL 345
T T + GT Y+APE L D+ DIY+ G++
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPE-----VLDDSINMKHFESFKRADIYAMGLVF 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDL----LVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 52 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVE 106
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA R D
Sbjct: 107 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HD 165
Query: 306 GHTRTTTWS---LAGTVGYIAPECHQTVALSDT-----------CDIYSFGVLL 345
T T + GT Y+APE L D+ DIY+ G++
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPE-----VLDDSINMKHFESFKRADIYAMGLVF 214
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 195 SEIITAGQVRHRNIVPLLARMVRRDCDL----LVYEFRRNGSLQDILYDVSQGRRELDWL 250
+EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 49 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVE 103
Query: 251 ARHRIAQGIASGLEYLHMS-----HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD 305
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA R D
Sbjct: 104 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HD 162
Query: 306 GHTRTTTWS---LAGTVGYIAPECHQTVALSDT-----------CDIYSFGVLL 345
T T + GT Y+APE L D+ DIY+ G++
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPE-----VLDDSINMKHFESFKRADIYAMGLVF 211
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 184 ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 33/249 (13%)
Query: 183 SEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQ 242
S+ + K +Q E +T Q H +IV L+ ++ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 243 GRR-ELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 301
R+ LD + A +++ L YL R +HRDI NVL+ ++ +FGL++
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 159
Query: 302 RIPDG-HTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFF 359
+ D + + + L + ++APE + D++ FGV + +L+ G P F
Sbjct: 160 YMEDSTYYKASKGKLP--IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----F 213
Query: 360 QHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSK 419
Q K ++ + N P + L L C+ DP++RP
Sbjct: 214 QGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFT 260
Query: 420 DVRCMLSQI 428
+++ LS I
Sbjct: 261 ELKAQLSTI 269
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ YL+ + +HR++ N ++ D +I +FG+ + I + V
Sbjct: 141 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL 345
++APE + + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIAQGIA 260
++V LL + + L+V E +G L+ L + + GR ++A IA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 261 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
G+ YL+ + +HR++ N ++ D +I +FG+ + I + V
Sbjct: 142 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 321 YIAPECHQTVALSDTCDIYSFGVLL 345
++APE + + + D++SFGV+L
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVL 223
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
E++ + IVPL + + E GSL ++ + QG D A + +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE--QGCLPED-RALYYL 191
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKRI-PDGHTRT--T 311
Q + GLEYLH RI+H D++ NVL+ D A + +FG A + PDG ++ T
Sbjct: 192 GQAL-EGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC----DIYSFGVLLAVLVIGKFPSDDFFQ 360
+ GT ++APE V L +C D++S ++ ++ G P FF+
Sbjct: 248 GDYIPGTETHMAPE----VVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 32/229 (13%)
Query: 131 EKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKM 190
+ E F+ L +I G VY A +S V+ IKK+ K E K
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNS-EVVAIKKMSYSGKQSNE-----------KW 59
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I E+ ++RH N + +R LV E+ GS D+L + +E++
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA 118
Query: 251 ARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRT 310
A + G GL YLH SH +IHRD++ N+L+ + ++ +FG A + +
Sbjct: 119 A---VTHGALQGLAYLH-SHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-- 170
Query: 311 TTWSLAGTVGYIAPECHQTVALSD-----TCDIYSFGVLLAVLVIGKFP 354
GT ++APE +A+ + D++S G+ L K P
Sbjct: 171 ----FVGTPYWMAPEV--ILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 203 VRHRNIVPLL----ARMVRRDCDLLVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIA 256
++H NIV + + + C +LV E +G+L+ L + V + + W
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------C 135
Query: 257 QGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSL 315
+ I GL++LH + P IIHRD++ N+ I +I + GLA + ++
Sbjct: 136 RQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AV 190
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVM 375
GT + APE ++ ++ D+Y+FG ++P +++ + Q R V
Sbjct: 191 IGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYP------YSECQNAAQIYRRVT 243
Query: 376 TSENP 380
+ P
Sbjct: 244 SGVKP 248
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 41 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 92
Query: 208 IVPLLARMVRRDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y V+ D+L H I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 205 HRNIVPLLARMVRRDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RH 253
H N+V LL + L+V EF + G+L L Y V+ D+L H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 254 RIAQG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHT 308
I +A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD +
Sbjct: 187 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YV 242
Query: 309 RTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
R L + ++APE + D++SFGVLL + +G P
Sbjct: 243 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
E++ + IVPL + + E GSL ++ +++ L R
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRA 166
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKRI-PDGHTRT--T 311
+ LE L H RI+H D++ NVL+ D A + +FG A + PDG ++ T
Sbjct: 167 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQ 360
+ GT ++APE DI+S ++ ++ G P +F+
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 275
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 32 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 83
Query: 208 IVPLLARMVRRDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y V+ D+L H I
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 41 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 92
Query: 208 IVPLLARMVRRDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y V+ D+L H I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTT 311
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKG 208
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L + ++APE + D++SFGVLL + +G P
Sbjct: 209 DARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 32 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 83
Query: 208 IVPLLARMVRRDCDLLVY-EFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y V+ D+L H I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTT 311
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKG 199
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L + ++APE + D++SFGVLL + +G P
Sbjct: 200 DARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 32 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 83
Query: 208 IVPLLARMVRRDCDLLVY-EFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y V+ D+L H I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
E++ + IVPL + + E GSL ++ +++ L R
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRA 152
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKRI-PDGHTRT--T 311
+ LE L H RI+H D++ NVL+ D A + +FG A + PDG ++ T
Sbjct: 153 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQ 360
+ GT ++APE DI+S ++ ++ G P +F+
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
H NI+ LL R L E+ +G+L D L + R L+ IA AS L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 137
Query: 265 YLHMSH-------------RPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTT 311
+ H + + IHR++ N+L+ ++ A+I++FGL+ R + + + T
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS-RGQEVYVKKT 196
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L V ++A E + D++S+GVLL ++ +G P
Sbjct: 197 MGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 32 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 83
Query: 208 IVPLLARMVRRDCDLLVY-EFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y V+ D+L H I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTT 311
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKG 199
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L + ++APE + D++SFGVLL + +G P
Sbjct: 200 DARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 176
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
E++ + IVPL + + E GSL ++ +++ L R
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRA 168
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKRI-PDGHTRT--T 311
+ LE L H RI+H D++ NVL+ D A + +FG A + PDG ++ T
Sbjct: 169 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQ 360
+ GT ++APE DI+S ++ ++ G P +F+
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I +
Sbjct: 164 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 314 SLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
V +++PE + + D++SFGV+L
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 252
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 41 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 92
Query: 208 IVPLLARMVRRDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y V+ D+L H I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWS 314
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 315 LAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 43/243 (17%)
Query: 205 HRNIVPLLARMVR----RDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQ--- 257
H NI+ L+A +R + L+ F + G+L + ++ + + + ++L +I
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWN---EIERLKDKGNFLTEDQILWLLL 141
Query: 258 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP---DGHTRTTT-- 312
GI GLE +H HRD++P N+L+ D+ + + + G + +G + T
Sbjct: 142 GICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198
Query: 313 -WSLA-GTVGYIAPE---CHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSL 367
W+ T+ Y APE + + D++S G +L ++ G+ P D FQ ++L
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258
Query: 368 -VQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLS 426
VQ ++ S + A+ L M+ V DP++RP+ + +LS
Sbjct: 259 AVQNQLSIPQSPRHSSALWQLL------NSMMTV----------DPHQRPH---IPLLLS 299
Query: 427 QIQ 429
Q++
Sbjct: 300 QLE 302
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
E++ + IVPL + + E GSL ++ + QG D A + +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE--QGCLPED-RALYYL 172
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKRI-PDGHTR--TT 311
Q + GLEYLH RI+H D++ NVL+ D A + +FG A + PDG + T
Sbjct: 173 GQAL-EGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 312 TWSLAGTVGYIAPECHQTVALSDTC----DIYSFGVLLAVLVIGKFPSDDFFQ 360
+ GT ++APE V L +C D++S ++ ++ G P FF+
Sbjct: 229 GDYIPGTETHMAPE----VVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM---EARISEFGLAKRIPDGHTRT 310
R+ + I G+ YLH ++ I+H D++P N+L+ + +I +FG++++I GH
Sbjct: 135 RLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHA-C 188
Query: 311 TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFP 354
+ GT Y+APE ++ D+++ G++ +L+ P
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 241 SQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLA 300
S G L + IA+ +A+G+ YL S R + +HRD+ N L+ ++M +I++FGL+
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYL--SER-KFVHRDLATRNCLVGENMVVKIADFGLS 221
Query: 301 KRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ I + A + ++ PE + D++++GV+L
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 126 DLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEP 185
+ F ++ + L KI GEV+KA +G+ + +KK+ L++ + E
Sbjct: 10 ECPFCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKV---------LMENEKEG 59
Query: 186 LHHKMIQIRSEIITAGQVRHRNIVPLL------ARMVRRDCD---LLVYEFRRN---GSL 233
I EI ++H N+V L+ A R C LV++F + G L
Sbjct: 60 FP---ITALREIKILQLLKHENVVNLIEICRTKASPYNR-CKGSIYLVFDFCEHDLAGLL 115
Query: 234 QDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR 293
++L + + R+ Q + +GL Y+H R +I+HRD++ ANVLI D +
Sbjct: 116 SNVLVKFTLSEIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLK 165
Query: 294 ISEFGLAK 301
+++FGLA+
Sbjct: 166 LADFGLAR 173
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 126 DLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEP 185
+ F ++ + L KI GEV+KA +G+ + +KK+ L++ + E
Sbjct: 10 ECPFCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKV---------LMENEKEG 59
Query: 186 LHHKMIQIRSEIITAGQVRHRNIVPLL------ARMVRRDCD---LLVYEFRRN---GSL 233
I EI ++H N+V L+ A R C LV++F + G L
Sbjct: 60 FP---ITALREIKILQLLKHENVVNLIEICRTKASPYNR-CKASIYLVFDFCEHDLAGLL 115
Query: 234 QDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR 293
++L + + R+ Q + +GL Y+H R +I+HRD++ ANVLI D +
Sbjct: 116 SNVLVKFTLSEIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLK 165
Query: 294 ISEFGLAK 301
+++FGLA+
Sbjct: 166 LADFGLAR 173
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 21/184 (11%)
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR---ISEFGLAKRIPDGHTRT- 310
+A + S +EY+H + IHRD++P N L+ + I +FGLAK+ D T
Sbjct: 110 LADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166
Query: 311 ----TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMS 366
+L GT Y + H + S D+ S G +L +G P TK
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226
Query: 367 LVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLS 426
+ M++ ++L GY + L DD +P+ +R +
Sbjct: 227 YERISEKKMSTP-------IEVLCKGYPSEFATYLNFCRSLRFDD---KPDYSYLRQLFR 276
Query: 427 QIQH 430
+ H
Sbjct: 277 NLFH 280
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PD----GHTRTT 311
+A G+E+L S R + IHRD+ N+L+ ++ +I +FGLA+ I PD G TR
Sbjct: 208 VARGMEFL--SSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL- 263
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE S D++S+GVLL + +G P
Sbjct: 264 ------PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 126 DLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEP 185
+ F ++ + L KI GEV+KA +G+ + +KK+ L++ + E
Sbjct: 10 ECPFCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKV---------LMENEKEG 59
Query: 186 LHHKMIQIRSEIITAGQVRHRNIVPLL------ARMVRRDCD---LLVYEFRRN---GSL 233
I EI ++H N+V L+ A R C LV++F + G L
Sbjct: 60 FP---ITALREIKILQLLKHENVVNLIEICRTKASPYNR-CKGSIYLVFDFCEHDLAGLL 115
Query: 234 QDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR 293
++L + + R+ Q + +GL Y+H R +I+HRD++ ANVLI D +
Sbjct: 116 SNVLVKFTLSEIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLK 165
Query: 294 ISEFGLAK 301
+++FGLA+
Sbjct: 166 LADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 126 DLAFLEKEDYFASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEP 185
+ F ++ + L KI GEV+KA +G+ + +KK+ L++ + E
Sbjct: 9 ECPFCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKV---------LMENEKEG 58
Query: 186 LHHKMIQIRSEIITAGQVRHRNIVPLL------ARMVRRDCD---LLVYEFRRN---GSL 233
I EI ++H N+V L+ A R C LV++F + G L
Sbjct: 59 FP---ITALREIKILQLLKHENVVNLIEICRTKASPYNR-CKGSIYLVFDFCEHDLAGLL 114
Query: 234 QDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR 293
++L + + R+ Q + +GL Y+H R +I+HRD++ ANVLI D +
Sbjct: 115 SNVLVKFTLSEIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLK 164
Query: 294 ISEFGLAK 301
+++FGLA+
Sbjct: 165 LADFGLAR 172
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 21/184 (11%)
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR---ISEFGLAKRIPDGHTRT- 310
+A + S +EY+H + IHRD++P N L+ + I +FGLAK+ D T
Sbjct: 108 LADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 164
Query: 311 ----TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMS 366
+L GT Y + H + S D+ S G +L +G P TK
Sbjct: 165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224
Query: 367 LVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLS 426
+ M++ ++L GY + L DD +P+ +R +
Sbjct: 225 YERISEKKMSTP-------IEVLCKGYPSEFATYLNFCRSLRFDD---KPDYSYLRQLFR 274
Query: 427 QIQH 430
+ H
Sbjct: 275 NLFH 278
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 222 LLVYEFRRNGSLQDILYDVSQGRRELDWLARH--RIAQGIASGLEYLHMSHRPRIIHRDI 279
+++ F ++G L L G + + R IA G+EYL S R IHRD+
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL--SSR-NFIHRDL 163
Query: 280 QPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIY 339
N ++ +DM +++FGL+++I G + V ++A E + D++
Sbjct: 164 AARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVW 223
Query: 340 SFGVLL-AVLVIGKFP 354
+FGV + ++ G+ P
Sbjct: 224 AFGVTMWEIMTRGQTP 239
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 250
I+ +E + ++V LL + + L++ E G L+ L + L
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 251 ARH------RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A ++A IA G+ YL+ + + +HRD+ N + +D +I +FG+ + I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL 345
+ V +++PE + + D++SFGV+L
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 14/170 (8%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY---DVSQGRREL 247
++ E + + H ++V LL + L V + +G L + ++ D + L
Sbjct: 62 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLL 120
Query: 248 DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGH 307
+W + IA G+ YL R++HRD+ NVL+ +I++FGLA+ +
Sbjct: 121 NWCVQ------IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
Query: 308 TRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSD 356
+ ++A EC + D++S+GV + ++ G P D
Sbjct: 172 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 21/184 (11%)
Query: 255 IAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR---ISEFGLAKRIPDGHTRT- 310
+A + S +EY+H + IHRD++P N L+ + I +FGLAK+ D T
Sbjct: 110 LADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166
Query: 311 ----TTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMS 366
+L GT Y + H + S D+ S G +L +G P TK
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226
Query: 367 LVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLS 426
+ M++ ++L GY + L DD +P+ +R +
Sbjct: 227 YERISEKKMSTP-------IEVLCKGYPSEFSTYLNFCRSLRFDD---KPDYSYLRQLFR 276
Query: 427 QIQH 430
+ H
Sbjct: 277 NLFH 280
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ LEKI G V+KA+ + ++ +K++ + D E + ++
Sbjct: 4 YEKLEKIGEGTYGTVFKAK-NRETHEIVALKRV---------RLDDDDEGVPSSALR--- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDI--LYDVSQGRRELDWLAR 252
EI +++H+NIV L ++ D L LV+EF QD+ +D G +LD
Sbjct: 51 EICLLKELKHKNIV-RLHDVLHSDKKLTLVFEF----CDQDLKKYFDSCNG--DLDPEIV 103
Query: 253 HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTT 312
+ GL + H + ++HRD++P N+LI+ + E ++++FGLA+ G
Sbjct: 104 KSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCY 158
Query: 313 WSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLVIGK---FPSDD 357
+ T+ Y P+ L S + D++S G + A L FP +D
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGND 207
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 14/170 (8%)
Query: 191 IQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY---DVSQGRREL 247
++ E + + H ++V LL + L V + +G L + ++ D + L
Sbjct: 85 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLL 143
Query: 248 DWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGH 307
+W + IA G+ YL R++HRD+ NVL+ +I++FGLA+ +
Sbjct: 144 NWCVQ------IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
Query: 308 TRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSD 356
+ ++A EC + D++S+GV + ++ G P D
Sbjct: 195 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 158 SSGRVITIKKIIQ-PLKSGAEL-IKKDSEPLHH-KMIQIRSEIITAGQVRHRNI-----V 209
S+G + IKK+IQ P EL I +D LHH ++Q++S T G+ R+I +
Sbjct: 46 STGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVM 105
Query: 210 PLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLHMS 269
+ + R C +RR + IL V + Q I S + LH+
Sbjct: 106 EYVPDTLHRCCRNY---YRRQVAPPPILIKVF-------------LFQLIRS-IGCLHLP 148
Query: 270 HRPRIIHRDIQPANVLIDD-DMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPEC-- 326
+ HRDI+P NVL+++ D ++ +FG AK++ + + Y APE
Sbjct: 149 SV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV---AYICSRYYRAPELIF 204
Query: 327 ---HQTVALSDTCDIYSFGVLLAVLVIGK 352
H T A+ DI+S G + A +++G+
Sbjct: 205 GNQHYTTAV----DIWSVGCIFAEMMLGE 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 41 GQVIEADAFGIDKTATXRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 92
Query: 208 IVPLLARMVRRDCDLLV-YEFRRNGSLQDILYDVSQGRREL--------DWLA-RHRIAQ 257
+V LL + L+V EF + G+L L R E D+L H I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL---RSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 258 G--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTTT 312
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R
Sbjct: 150 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGD 205
Query: 313 WSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L + ++APE + D++SFGVLL + +G P
Sbjct: 206 ARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 205 HRNIVPLLARMVRRDCDLLV-YEFRRNGSLQDILYDVSQGRREL--------DWLA-RHR 254
H N+V LL + L+V EF + G+L L R E D+L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL---RSKRNEFVPYKDLYKDFLTLEHL 146
Query: 255 IAQG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTR 309
I +A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R
Sbjct: 147 IXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD-YVR 202
Query: 310 TTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L + ++APE + D++SFGVLL + +G P
Sbjct: 203 KGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 255
E+ ++H NIV L + LV+E+ + L+ L D + + H +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCG------NIINMHNV 102
Query: 256 AQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL--AKRIPDGHTRTTTW 313
+ L L HR +++HRD++P N+LI++ E ++++FGL AK IP T+T
Sbjct: 103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDN 159
Query: 314 SLAGTVGYIAPE-CHQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
+ T+ Y P+ + S D++ G + + G+ FP
Sbjct: 160 EVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP 202
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 32/229 (13%)
Query: 136 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRS 195
+ LEKI G V+KA+ + ++ +K++ + D E + ++
Sbjct: 4 YEKLEKIGEGTYGTVFKAK-NRETHEIVALKRV---------RLDDDDEGVPSSALR--- 50
Query: 196 EIITAGQVRHRNIVPLLARMVRRDCDL-LVYEFRRNGSLQDI--LYDVSQGRRELDWLAR 252
EI +++H+NIV L ++ D L LV+EF QD+ +D G +LD
Sbjct: 51 EICLLKELKHKNIV-RLHDVLHSDKKLTLVFEF----CDQDLKKYFDSCNG--DLDPEIV 103
Query: 253 HRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTT 312
+ GL + H + ++HRD++P N+LI+ + E +++ FGLA+ G
Sbjct: 104 KSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCY 158
Query: 313 WSLAGTVGYIAPECHQTVAL-SDTCDIYSFGVLLAVLV-IGK--FPSDD 357
+ T+ Y P+ L S + D++S G + A L G+ FP +D
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 43 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 94
Query: 208 IVPLLARMVRRDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIA 256
+V LL + L+V EF + G+L L Y + D+L H I
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 257 QG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTT 311
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R
Sbjct: 155 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKG 210
Query: 312 TWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
L + ++APE + D++SFGVLL + +G P
Sbjct: 211 DARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 24/220 (10%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G+V +A+ G ++ LK GA + H ++ +I G H N
Sbjct: 42 GQVIEADAFGIDKTATCRTVAVKMLKEGA------THSEHRALMSELKILIHIGH--HLN 93
Query: 208 IVPLLARMVRRDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLARHRIAQ 257
+V LL + L+V EF + G+L L Y + + H I
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 258 G--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL 315
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 205 HRNIVPLLARMVRRDCDLLV-YEFRRNGSLQDILYD-----VSQGRREL--DWLA-RHRI 255
H N+V LL + L+V EF + G+L L V +L D+L H I
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 256 AQG--IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTW 313
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 152 XYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 314 SLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
GL++LH + I+HRD++P N+L+ ++++FGLA+ + + + T+ Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWY 177
Query: 322 IAPECHQTVALSDTCDIYSFGVLLA 346
APE + D++S G + A
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL--- 315
IA +E+LH ++HRD++P+N+ D ++ +FGL + T +
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 316 -------AGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLV 349
GT Y++PE + S DI+S G++L L+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 47/232 (20%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
G V+K+ + +G V+ +KKI ++ + + E I I +E+ +G H N
Sbjct: 23 GIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFRE------IMILTEL--SG---HEN 70
Query: 208 IVPLLARMVRRDCD---LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
IV LL ++R D D LV+++ ++ L+ V + L+ + + + + ++
Sbjct: 71 IVNLL-NVLRADNDRDVYLVFDY-----METDLHAVIRANI-LEPVHKQYVVYQLIKVIK 123
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLA-------- 316
YLH ++HRD++P+N+L++ + ++++FGL++ + T L+
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 317 -----------GTVGYIAPEC-HQTVALSDTCDIYSFGVLLAVLVIGK--FP 354
T Y APE + + D++S G +L ++ GK FP
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 32/173 (18%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSL--- 315
IA +E+LH ++HRD++P+N+ D ++ +FGL + T +
Sbjct: 173 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 316 -------AGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLV 368
GT Y++PE S DI+S G++L L+ + + +M V
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---------YSFSTQMERV 280
Query: 369 QWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
+ + +V + P L Y ++ ++V + P +RP + D+
Sbjct: 281 RIITDVRNLKFP------LLFTQKYPQEHMMVQDMLS----PSPTERPEATDI 323
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 157
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 158 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 214
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 215 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 269
Query: 381 NRAIN 385
N +N
Sbjct: 270 NAYLN 274
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 136
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 193
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 194 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 248
Query: 381 NRAIN 385
N +N
Sbjct: 249 NVYLN 253
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 136
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 193
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 194 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 248
Query: 381 NRAIN 385
N +N
Sbjct: 249 NVYLN 253
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 136
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 193
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 194 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 248
Query: 381 NRAIN 385
N +N
Sbjct: 249 NVYLN 253
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 136
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 193
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 194 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 248
Query: 381 NRAIN 385
N +N
Sbjct: 249 NVYLN 253
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 136
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 193
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 194 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 248
Query: 381 NRAIN 385
N +N
Sbjct: 249 NVYLN 253
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTTTWSL 315
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R L
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 262
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 263 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 38/262 (14%)
Query: 179 IKKDSEPLHHKMIQIRSEIITAGQVRHRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILY 238
I++D+E ++ + E++ Q RH N+V + + ++ + +L ++
Sbjct: 65 IERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR 121
Query: 239 DVSQGRRELDWLARHRIAQGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 298
D + LD +IAQ I G+ YLH I+H+D++ NV D+ + I++FG
Sbjct: 122 D---AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFG 174
Query: 299 L---AKRIPDGHTRTTTWSLAGTVGYIAPEC---------HQTVALSDTCDIYSFGVLLA 346
L + + G G + ++APE + S D+++ G +
Sbjct: 175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWY 234
Query: 347 VLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACF 406
L ++P T+ + W + T PN + +G G E + I F
Sbjct: 235 ELHAREWPFK-----TQPAEAIIW--QMGTGMKPNLS----QIGMGKE-----ISDILLF 278
Query: 407 CTLDDPNKRPNSKDVRCMLSQI 428
C + +RP + ML ++
Sbjct: 279 CWAFEQEERPTFTKLMDMLEKL 300
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 137
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 194
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 195 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 249
Query: 381 NRAIN 385
N +N
Sbjct: 250 NVYLN 254
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTTTWSL 315
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R L
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 264
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 265 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 138
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 195
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 196 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 250
Query: 381 NRAIN 385
N +N
Sbjct: 251 NVYLN 255
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 136
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 193
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 194 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 248
Query: 381 NRAIN 385
N +N
Sbjct: 249 NVYLN 253
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTTTWSL 315
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R L
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 255
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 256 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 259 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI---PDGHTRTTTWSL 315
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I PD + R L
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 257
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFP 354
+ ++APE + D++SFGVLL + +G P
Sbjct: 258 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 37/233 (15%)
Query: 205 HRNIVPLLARMVRRDCD--LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASG 262
H N++P+L L+ + GSL ++L++ + +D + A +A G
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF--VVDQSQAVKFALDMARG 123
Query: 263 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARIS--EFGLAKRIPDGHTRTTTWSLAGTVG 320
+ +LH + P I + +V+ID+DM ARIS + + + P G W
Sbjct: 124 MAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-GRMYAPAW------- 174
Query: 321 YIAPECHQTVALSDT----CDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMT 376
+APE Q DT D++SF VLL LV + P F M + M+ +
Sbjct: 175 -VAPEALQKKP-EDTNRRSADMWSFAVLLWELVTREVP----FADLSNMEIG--MKVALE 226
Query: 377 SENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQIQ 429
P + G + ++KI C +DP KRP + +L ++Q
Sbjct: 227 GLRPT-------IPPGISPHVSKLMKI---CMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 207 NIVPLL--ARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLE 264
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 137
Query: 265 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKRIPDGHTRTTTWSLAGTVGYIA 323
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G + +
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 194
Query: 324 PECHQTVALSD---TCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVMTSENP 380
PE V L D + D++S G + A ++ K P F+ H LV+ + V+ ++
Sbjct: 195 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK-IAKVLGTDGL 249
Query: 381 NRAIN 385
N +N
Sbjct: 250 NVYLN 254
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 46/238 (19%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGI----- 259
H NIV LL L++ E+ G L + L RR+ D + + I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 162
Query: 260 ---------------ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A G+ +L + IHRD+ N+L+ +I +FGLA+ I
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTK 363
+ + V ++APE + D++S+G+ L + +G P +K
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 364 EMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
+++ +++ E+ +M ++K C DP KRP K +
Sbjct: 280 FYKMIKEGFRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 321
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 111/286 (38%), Gaps = 45/286 (15%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ G I + ++ K L K+ + SE + + H +
Sbjct: 22 GEVYEGVYTNHKGEKINVA--VKTCKKDCTLDNKE---------KFMSEAVIMKNLDHPH 70
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
IV L+ ++ + ++ E G L L + + L L + I + YL
Sbjct: 71 IVKLIG-IIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD-GHTRTTTWSLAGTVGYIAPEC 326
+ +HRDI N+L+ ++ +FGL++ I D + + + L + +++PE
Sbjct: 127 SIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPES 181
Query: 327 HQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRN---VMTSENPNR 382
+ D++ F V + +L GK P FF W+ N + E +R
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQP---FF----------WLENKDVIGVLEKGDR 228
Query: 383 AINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
L +L L C+ DP+ RP ++ C LS +
Sbjct: 229 LPKPDLC-----PPVLYTLMTRCWDY--DPSDRPRFTELVCSLSDV 267
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 111/286 (38%), Gaps = 45/286 (15%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ G I + ++ K L K+ + SE + + H +
Sbjct: 26 GEVYEGVYTNHKGEKINVA--VKTCKKDCTLDNKE---------KFMSEAVIMKNLDHPH 74
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
IV L+ ++ + ++ E G L L + + L L + I + YL
Sbjct: 75 IVKLIG-IIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD-GHTRTTTWSLAGTVGYIAPEC 326
+ +HRDI N+L+ ++ +FGL++ I D + + + L + +++PE
Sbjct: 131 SIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPES 185
Query: 327 HQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRN---VMTSENPNR 382
+ D++ F V + +L GK P FF W+ N + E +R
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQP---FF----------WLENKDVIGVLEKGDR 232
Query: 383 AINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
L +L L C+ DP+ RP ++ C LS +
Sbjct: 233 LPKPDLC-----PPVLYTLMTRCWDY--DPSDRPRFTELVCSLSDV 271
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGY 321
GL++LH + I+HRD++P N+L+ ++++FGLA RI T + T+ Y
Sbjct: 132 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALT--PVVVTLWY 185
Query: 322 IAPECHQTVALSDTCDIYSFGVLLA 346
APE + D++S G + A
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFA 210
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLA----- 316
GL++LH + I+HRD++P N+L+ ++++FGLA R ++ +A
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA--------RIYSYQMALAPVV 172
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLLA 346
T+ Y APE + D++S G + A
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLA----- 316
GL++LH + I+HRD++P N+L+ ++++FGLA R ++ +A
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA--------RIYSYQMALDPVV 172
Query: 317 GTVGYIAPECHQTVALSDTCDIYSFGVLLA 346
T+ Y APE + D++S G + A
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 111/286 (38%), Gaps = 45/286 (15%)
Query: 148 GEVYKAELPGSSGRVITIKKIIQPLKSGAELIKKDSEPLHHKMIQIRSEIITAGQVRHRN 207
GEVY+ G I + ++ K L K+ + SE + + H +
Sbjct: 38 GEVYEGVYTNHKGEKINVA--VKTCKKDCTLDNKE---------KFMSEAVIMKNLDHPH 86
Query: 208 IVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYLH 267
IV L+ ++ + ++ E G L L + + L L + I + YL
Sbjct: 87 IVKLIG-IIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 268 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIPD-GHTRTTTWSLAGTVGYIAPEC 326
+ +HRDI N+L+ ++ +FGL++ I D + + + L + +++PE
Sbjct: 143 SIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPES 197
Query: 327 HQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTKEMSLVQWMRN---VMTSENPNR 382
+ D++ F V + +L GK P FF W+ N + E +R
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQP---FF----------WLENKDVIGVLEKGDR 244
Query: 383 AINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDVRCMLSQI 428
L +L L C+ DP+ RP ++ C LS +
Sbjct: 245 LPKPDLC-----PPVLYTLMTRCWDY--DPSDRPRFTELVCSLSDV 283
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
Query: 270 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI--------------------PDGHTR 309
H IIHRD++PAN L++ D +I +FGLA+ I P H +
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 310 TTTWSLAGTV---GYIAPE-CHQTVALSDTCDIYSFGVLLAVLV 349
L V Y APE +++ DI+S G + A L+
Sbjct: 208 NLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 46/238 (19%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGI----- 259
H NIV LL L++ E+ G L + L RR+ D + + I
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 157
Query: 260 ---------------ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A G+ +L + IHRD+ N+L+ +I +FGLA+ I
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTK 363
+ + V ++APE + D++S+G+ L + +G P +K
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 274
Query: 364 EMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
+++ +++ E+ +M ++K C DP KRP K +
Sbjct: 275 FYKMIKEGFRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 316
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 46/238 (19%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGI----- 259
H NIV LL L++ E+ G L + L RR+ D + + I
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 155
Query: 260 ---------------ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A G+ +L + IHRD+ N+L+ +I +FGLA+ I
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTK 363
+ + V ++APE + D++S+G+ L + +G P +K
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 272
Query: 364 EMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
+++ +++ E+ +M ++K C DP KRP K +
Sbjct: 273 FYKMIKEGFRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 314
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 46/238 (19%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGI----- 259
H NIV LL L++ E+ G L + L RR+ D + + I
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 139
Query: 260 ---------------ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A G+ +L + IHRD+ N+L+ +I +FGLA+ I
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTK 363
+ + V ++APE + D++S+G+ L + +G P +K
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 364 EMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
+++ +++ E+ +M ++K C DP KRP K +
Sbjct: 257 FYKMIKEGFRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 298
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 46/238 (19%)
Query: 205 HRNIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGI----- 259
H NIV LL L++ E+ G L + L RR+ D + + I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 162
Query: 260 ---------------ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRIP 304
A G+ +L + IHRD+ N+L+ +I +FGLA+ I
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 305 DGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLL-AVLVIGKFPSDDFFQHTK 363
+ + V ++APE + D++S+G+ L + +G P +K
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 364 EMSLVQWMRNVMTSENPNRAINSKLLGNGYEEQMLLVLKIACFCTLDDPNKRPNSKDV 421
+++ +++ E+ +M ++K C DP KRP K +
Sbjct: 280 FYKMIKEGFRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 321
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 29/114 (25%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI--PDG------------- 306
G++Y+H + I+HRD++PAN L++ D ++ +FGLA+ + P+
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 307 -------HTRTTTWSLAGTV---GYIAPE-CHQTVALSDTCDIYSFGVLLAVLV 349
HT+ L G V Y APE ++ D++S G + A L+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 21/101 (20%)
Query: 270 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKRI-----------------PDGHTRTTT 312
H IIHRD++PAN L++ D ++ +FGLA+ I P H +
Sbjct: 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 313 WSLAGTV---GYIAPE-CHQTVALSDTCDIYSFGVLLAVLV 349
L V Y APE + + DI+S G + A L+
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 263 LEYLHMSHRPRIIHRDIQPANVLID--DDMEARISEFGLAKR-IPDGHTR----TTTWSL 315
LEY+H + +H DI+ AN+L+ + + ++++GL+ R P+G+ +
Sbjct: 164 LEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGH 220
Query: 316 AGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQWMRNVM 375
GT+ + + + H+ VALS D+ G + + GK P + Q+ K+ VQ + +
Sbjct: 221 NGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE---QNLKDPVAVQTAKTNL 277
Query: 376 TSENPNRAI 384
E P +
Sbjct: 278 LDELPQSVL 286
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 262 GLEYLHMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVG 320
GL+Y+H ++ ++HRD++PAN+ I+ +D+ +I +FGLA RI D H G V
Sbjct: 132 GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLA-RIMDPHYSHKGHLSEGLVT 187
Query: 321 --YIAPECHQTV-ALSDTCDIYSFGVLLAVLVIGK 352
Y +P + + D+++ G + A ++ GK
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR----IPDGHTRTTTWSLAGTVGY 321
LH+ H ++HRD+ P N+L+ D+ + I +F LA+ H T W Y
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW-------Y 199
Query: 322 IAPE-CHQTVALSDTCDIYSFGVLLA 346
APE Q + D++S G ++A
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMA 225
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 266 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKR----IPDGHTRTTTWSLAGTVGY 321
LH+ H ++HRD+ P N+L+ D+ + I +F LA+ H T W Y
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW-------Y 199
Query: 322 IAPE-CHQTVALSDTCDIYSFGVLLA 346
APE Q + D++S G ++A
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMA 225
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 75 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 128
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 184
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 185 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 90 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 143
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 199
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 200 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 250
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 276 HRDIQPANVLIDDDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDT 335
HRD++P N+L+ D A + +FG+A D T + GT+ Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTD-EKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 336 CDIYSFGVLLAVLVIGKFP 354
DIY+ +L + G P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 117 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 170
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 226
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 227 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 277
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 89 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 142
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 198
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 199 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 249
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 74 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 127
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 183
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 184 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 234
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 73 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 126
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 182
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 183 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 233
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 75 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 128
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 184
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 185 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 235
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 75 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 128
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 184
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 185 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 235
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 102 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 155
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 211
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 212 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 262
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 117 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 170
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 226
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 227 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 277
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 70 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 123
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 179
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 180 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 216
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 102 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 155
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 211
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 212 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 212
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 213 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 249
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 89 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 142
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 198
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 199 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 235
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 74 GVIRLLDWFERPDSFVLILE--RMEPVQDLFDFITERGALQEELARSFFWQV----LEAV 127
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 183
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 184 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 234
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 109 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 162
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 218
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 219 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 269
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 212
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 213 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 249
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 90 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 143
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 199
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 200 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 212
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 213 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 249
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 102 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 155
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 211
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 212 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 248
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 97 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 150
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 206
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 207 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 243
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 90 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 143
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 199
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 200 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 236
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 29/133 (21%)
Query: 254 RIAQGIASGLEYLHMSHRPRIIHRDIQPANVLI--DDDMEA-----------------RI 294
++A I + +LH + ++ H D++P N+L D EA ++
Sbjct: 122 KMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 295 SEFGLAKRIPDGHTRTTTWSLAGTVGYIAPECHQTVALSDTCDIYSFGVLLAVLVIG--K 352
+FG A + H+ +L T Y APE + S CD++S G +L +G
Sbjct: 179 VDFGSATYDDEHHS-----TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 353 FPSDDFFQHTKEM 365
FP+ D +H M
Sbjct: 234 FPTHDSKEHLAMM 246
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 212
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEM 365
H+ S ++S G+LL +V G P F+H +E+
Sbjct: 213 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEI 249
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 207 NIVPLLARMVRRDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAQGIASGLEYL 266
++ LL R D +L+ E R +QD+ +++ + LAR Q LE +
Sbjct: 70 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 123
Query: 267 HMSHRPRIIHRDIQPANVLID-DDMEARISEFGLAKRIPDGHTRTTTWSLAGTVGYIAPE 325
H ++HRDI+ N+LID + E ++ +FG + D T GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPE 179
Query: 326 C---HQTVALSDTCDIYSFGVLLAVLVIGKFPSDDFFQHTKEMSLVQ-WMRNVMTSE 378
H+ S ++S G+LL +V G P F+H +E+ Q + R ++SE
Sbjct: 180 WIRYHRYHGRSAA--VWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSE 230
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,625,901
Number of Sequences: 62578
Number of extensions: 520819
Number of successful extensions: 3110
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 1427
Number of HSP's gapped (non-prelim): 1124
length of query: 430
length of database: 14,973,337
effective HSP length: 102
effective length of query: 328
effective length of database: 8,590,381
effective search space: 2817644968
effective search space used: 2817644968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)