Query 014141
Match_columns 430
No_of_seqs 148 out of 1654
Neff 9.6
Searched_HMMs 13730
Date Mon Mar 25 06:12:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014141.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014141hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fs1a1 a.158.1.1 (A:109-149) 99.1 3.3E-11 2.4E-15 74.1 3.4 35 23-57 1-35 (41)
2 d2astb2 c.10.1.3 (B:2136-2419) 99.0 5E-11 3.6E-15 108.1 2.9 81 162-242 44-130 (284)
3 d2astb2 c.10.1.3 (B:2136-2419) 98.8 9.4E-11 6.8E-15 106.2 -1.2 167 161-334 68-252 (284)
4 d1nexb1 a.158.1.1 (B:270-369) 98.7 1.5E-09 1.1E-13 81.4 0.8 40 20-59 3-42 (100)
5 d2ovrb1 a.158.1.1 (B:2263-2364 98.7 4.5E-09 3.2E-13 79.2 3.4 37 20-56 16-52 (102)
6 d1p22a1 a.158.1.1 (A:135-252) 98.3 9.3E-08 6.8E-12 73.7 2.1 37 20-56 8-48 (118)
7 d1h6ua2 c.10.2.1 (A:36-262) In 98.1 9E-07 6.5E-11 76.4 4.4 60 160-223 59-118 (227)
8 d1h6ta2 c.10.2.1 (A:31-240) In 98.1 4.9E-07 3.5E-11 77.2 2.2 59 160-222 64-122 (210)
9 d2omxa2 c.10.2.1 (A:37-235) In 98.0 2.2E-06 1.6E-10 72.3 4.5 37 161-200 59-95 (199)
10 d2omxa2 c.10.2.1 (A:37-235) In 97.9 2.4E-06 1.7E-10 72.1 4.1 158 162-336 38-199 (199)
11 d1h6ta2 c.10.2.1 (A:31-240) In 97.9 4.2E-06 3.1E-10 71.1 4.4 162 162-340 44-209 (210)
12 d1a9na_ c.10.2.4 (A:) Spliceso 97.7 3.1E-06 2.2E-10 68.9 1.2 79 161-243 15-97 (162)
13 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.7 6.2E-06 4.5E-10 75.7 3.5 143 251-398 156-312 (344)
14 d1p9ag_ c.10.2.7 (G:) von Will 97.7 6.1E-06 4.5E-10 72.9 2.1 189 164-387 31-224 (266)
15 d2omza2 c.10.2.1 (A:33-416) In 97.4 2.1E-05 1.5E-09 72.8 2.5 188 158-369 191-382 (384)
16 d2omza2 c.10.2.1 (A:33-416) In 97.3 5.4E-05 4E-09 69.9 4.2 186 184-396 192-381 (384)
17 d1h6ua2 c.10.2.1 (A:36-262) In 97.3 0.0001 7.6E-09 62.9 5.5 144 160-339 81-225 (227)
18 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.1 5.5E-05 4E-09 71.4 1.0 80 162-243 25-122 (460)
19 d1p9ag_ c.10.2.7 (G:) von Will 96.8 0.00026 1.9E-08 61.9 3.5 161 159-329 50-222 (266)
20 d2ca6a1 c.10.1.2 (A:2-345) Rna 96.8 6.3E-05 4.6E-09 68.7 -1.3 114 251-369 184-311 (344)
21 d1xkua_ c.10.2.7 (A:) Decorin 96.7 0.00084 6.1E-08 59.7 5.7 41 159-200 50-90 (305)
22 d1a9na_ c.10.2.4 (A:) Spliceso 96.7 0.00059 4.3E-08 54.7 4.1 128 186-339 15-147 (162)
23 d1ozna_ c.10.2.7 (A:) Reticulo 96.4 0.0012 8.4E-08 58.1 4.4 196 164-375 32-242 (284)
24 d1ozna_ c.10.2.7 (A:) Reticulo 96.2 0.0019 1.4E-07 56.6 4.9 172 159-341 51-235 (284)
25 d1dcea3 c.10.2.2 (A:444-567) R 96.2 0.00041 3E-08 53.0 0.0 40 159-200 15-54 (124)
26 d1xwdc1 c.10.2.7 (C:18-259) Fo 96.1 0.006 4.3E-07 51.8 7.6 169 164-339 29-209 (242)
27 d1m9la_ c.10.3.1 (A:) Outer ar 95.9 3.4E-05 2.4E-09 64.7 -7.9 59 160-222 44-103 (198)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 95.7 0.0057 4.2E-07 51.9 5.7 65 159-223 48-114 (242)
29 d1m9la_ c.10.3.1 (A:) Outer ar 95.7 0.00019 1.4E-08 59.9 -4.0 41 182-223 41-81 (198)
30 d1ogqa_ c.10.2.8 (A:) Polygala 95.6 0.0012 8.7E-08 58.9 0.8 59 276-340 217-277 (313)
31 d1ogqa_ c.10.2.8 (A:) Polygala 95.5 0.0023 1.7E-07 56.9 2.4 89 155-244 67-160 (313)
32 d1w8aa_ c.10.2.7 (A:) Slit {Fr 94.9 0.0061 4.5E-07 49.9 2.9 79 164-243 29-112 (192)
33 d1pgva_ c.10.1.1 (A:) Tropomod 94.9 0.0076 5.6E-07 48.1 3.4 24 179-202 5-28 (167)
34 d1pgva_ c.10.1.1 (A:) Tropomod 94.8 0.0063 4.6E-07 48.7 2.7 122 274-400 9-143 (167)
35 d1io0a_ c.10.1.1 (A:) Tropomod 94.7 0.0073 5.3E-07 48.1 2.9 21 320-340 121-141 (166)
36 d1dcea3 c.10.2.2 (A:444-567) R 94.3 0.015 1.1E-06 43.7 3.6 31 167-200 1-31 (124)
37 d1xkua_ c.10.2.7 (A:) Decorin 94.1 0.01 7.3E-07 52.3 2.6 15 277-291 239-253 (305)
38 d1io0a_ c.10.1.1 (A:) Tropomod 94.1 0.01 7.5E-07 47.2 2.4 122 274-400 11-144 (166)
39 d1z7xw1 c.10.1.1 (W:1-460) Rib 93.2 0.017 1.2E-06 53.5 2.5 55 254-311 3-63 (460)
40 d1jl5a_ c.10.2.6 (A:) Leucine 89.6 0.27 2E-05 43.0 6.6 54 276-340 280-333 (353)
41 d2ifga3 c.10.2.7 (A:36-191) Hi 89.6 0.059 4.3E-06 42.1 1.7 67 155-223 22-91 (156)
42 d1w8aa_ c.10.2.7 (A:) Slit {Fr 88.7 0.08 5.8E-06 42.7 2.0 67 159-228 49-117 (192)
43 d1jl5a_ c.10.2.6 (A:) Leucine 84.4 0.25 1.8E-05 43.3 3.1 53 211-264 283-335 (353)
44 d2ifga3 c.10.2.7 (A:36-191) Hi 79.4 0.59 4.3E-05 36.0 3.2 58 185-243 27-90 (156)
45 d1koha1 c.10.2.3 (A:201-362) m 65.1 0.46 3.3E-05 36.9 -0.8 37 163-199 64-101 (162)
46 d1koha1 c.10.2.3 (A:201-362) m 55.5 0.34 2.5E-05 37.7 -3.3 61 276-337 87-152 (162)
No 1
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=3.3e-11 Score=74.11 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.8
Q ss_pred CCCCCHHHHHHHHhcCChHHHHHHHHhhhhhhhhc
Q 014141 23 FSRFPDDILIHIISGLTLKEAARTSVLSSRWKYLW 57 (430)
Q Consensus 23 is~LPdeiL~~Ils~L~~~d~~rts~vSrrWr~lw 57 (430)
++.||+||+.+||++|+.+|+++++.|||+|+++-
T Consensus 1 f~~LP~eil~~If~~L~~~dl~~~~~Vcr~w~~l~ 35 (41)
T d1fs1a1 1 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLA 35 (41)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999863
No 2
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00 E-value=5e-11 Score=108.08 Aligned_cols=81 Identities=14% Similarity=0.129 Sum_probs=56.7
Q ss_pred CCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCc-eeeEecCCCCcceEEEeecCCccEE-----EEeCCce
Q 014141 162 GIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLL-SLKVVGSSIPLKCLDIQFCYSIKEI-----EISAPNL 235 (430)
Q Consensus 162 ~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~-~~~i~~~~~~L~~L~l~~c~~l~~i-----~i~~P~L 235 (430)
...+|++|+|+++.++++.+..++..||+|++|.|.+|..-. .+..-+.+++|++|.+.+|..+... .-.+|+|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 447899999999999888899999999999999999995321 1111234578999998888754321 1134566
Q ss_pred eEEEEec
Q 014141 236 LSFKYIG 242 (430)
Q Consensus 236 ~~L~~~~ 242 (430)
++|++.+
T Consensus 124 ~~L~ls~ 130 (284)
T d2astb2 124 DELNLSW 130 (284)
T ss_dssp CEEECCC
T ss_pred ccccccc
Confidence 6665544
No 3
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=9.4e-11 Score=106.23 Aligned_cols=167 Identities=19% Similarity=0.277 Sum_probs=103.7
Q ss_pred CCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCcee---eEecCCCCcceEEEeecCCccE------EEEe
Q 014141 161 SGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSL---KVVGSSIPLKCLDIQFCYSIKE------IEIS 231 (430)
Q Consensus 161 ~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~---~i~~~~~~L~~L~l~~c~~l~~------i~i~ 231 (430)
.++++|++|+|.++.+++..+.. +..||+|+.|.+.+|.++++. .+...+++|++|.+.+|..+.. +.-.
T Consensus 68 ~~c~~L~~L~L~~~~l~~~~~~~-l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~ 146 (284)
T d2astb2 68 SQCSKLQNLSLEGLRLSDPIVNT-LAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV 146 (284)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHH-HTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHS
T ss_pred HhCCCcccccccccCCCcHHHHH-HhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhccc
Confidence 46788999999988877666655 467889999999988877642 2234568899999988875432 1123
Q ss_pred CCceeEEEEeccee-------eeecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeeccccc--CCC
Q 014141 232 APNLLSFKYIGQDI-------NLHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQ--REF 302 (430)
Q Consensus 232 ~P~L~~L~~~~~~~-------~~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~--~~~ 302 (430)
+|.|+.|.+.|+.. .....++|+|+++.+..+.... +.....+..+++|++|.+..+..+....+. ..+
T Consensus 147 ~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~it--d~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~ 224 (284)
T d2astb2 147 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLK--NDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEI 224 (284)
T ss_dssp CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCC--GGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGC
T ss_pred ccccchhhhcccccccccccccccccccccccccccccccCCC--chhhhhhcccCcCCEEECCCCCCCChHHHHHHhcC
Confidence 57888888776421 1122356777777775333221 112233456778888888765433332221 226
Q ss_pred CccceEEEEEeecCccchhhHHHHHhhCCCce
Q 014141 303 PKLMNLNISFTAANQETLLGLSFIMKACPFLE 334 (430)
Q Consensus 303 ~~L~~L~l~~~~~~~~~~~~l~~lL~~~p~L~ 334 (430)
++|++|++..+ .....+..+.+.+|+|+
T Consensus 225 ~~L~~L~l~~~----~~d~~l~~l~~~lp~L~ 252 (284)
T d2astb2 225 PTLKTLQVFGI----VPDGTLQLLKEALPHLQ 252 (284)
T ss_dssp TTCCEEECTTS----SCTTCHHHHHHHSTTSE
T ss_pred CCCCEEeeeCC----CCHHHHHHHHHhCcccc
Confidence 77787776332 23334667777788875
No 4
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.67 E-value=1.5e-09 Score=81.42 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=36.6
Q ss_pred cccCCCCCHHHHHHHHhcCChHHHHHHHHhhhhhhhhccc
Q 014141 20 EDWFSRFPDDILIHIISGLTLKEAARTSVLSSRWKYLWTF 59 (430)
Q Consensus 20 ~d~is~LPdeiL~~Ils~L~~~d~~rts~vSrrWr~lw~~ 59 (430)
.|.|+.||+||+.+||++|+.+|++++++|||+|+++...
T Consensus 3 ~D~~~~LP~Ell~~I~s~Ld~~dL~~~s~Vcr~W~~~~~~ 42 (100)
T d1nexb1 3 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 42 (100)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHTTTCHHHHHHHHT
T ss_pred CCchhhCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
Confidence 5889999999999999999999999999999999976443
No 5
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.67 E-value=4.5e-09 Score=79.18 Aligned_cols=37 Identities=22% Similarity=0.464 Sum_probs=35.6
Q ss_pred cccCCCCCHHHHHHHHhcCChHHHHHHHHhhhhhhhh
Q 014141 20 EDWFSRFPDDILIHIISGLTLKEAARTSVLSSRWKYL 56 (430)
Q Consensus 20 ~d~is~LPdeiL~~Ils~L~~~d~~rts~vSrrWr~l 56 (430)
.|.|+.||+||+.+||++|+.+|+++++.|||+|+.+
T Consensus 16 ~D~i~~LP~Eil~~Ils~Ld~~dL~~~~~vcr~w~~l 52 (102)
T d2ovrb1 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRIL 52 (102)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHH
T ss_pred cCChhhCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999985
No 6
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.29 E-value=9.3e-08 Score=73.72 Aligned_cols=37 Identities=24% Similarity=0.484 Sum_probs=34.5
Q ss_pred cccCCCCC----HHHHHHHHhcCChHHHHHHHHhhhhhhhh
Q 014141 20 EDWFSRFP----DDILIHIISGLTLKEAARTSVLSSRWKYL 56 (430)
Q Consensus 20 ~d~is~LP----deiL~~Ils~L~~~d~~rts~vSrrWr~l 56 (430)
.|.|+.|| |||+.+|||||+.+|+++++.|||+|+++
T Consensus 8 ~D~i~~LP~~l~~EI~~~Ils~Ld~~dL~~~s~Vck~W~~l 48 (118)
T d1p22a1 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRV 48 (118)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHH
T ss_pred ccHHHHCCCCChHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 58899999 59999999999999999999999999874
No 7
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.09 E-value=9e-07 Score=76.42 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=39.7
Q ss_pred CCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecC
Q 014141 160 LSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCY 223 (430)
Q Consensus 160 ~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~ 223 (430)
+.++++|++|+|++..+.+-. . +..++.|+.|.+.++.. +.+.--..+++|+.+.+.++.
T Consensus 59 l~~l~~L~~L~ls~n~i~~~~--~-l~~l~~l~~l~~~~n~~-~~i~~l~~l~~L~~l~l~~~~ 118 (227)
T d1h6ua2 59 VQYLNNLIGLELKDNQITDLA--P-LKNLTKITELELSGNPL-KNVSAIAGLQSIKTLDLTSTQ 118 (227)
T ss_dssp GGGCTTCCEEECCSSCCCCCG--G-GTTCCSCCEEECCSCCC-SCCGGGTTCTTCCEEECTTSC
T ss_pred HhcCCCCcEeecCCceeeccc--c-ccccccccccccccccc-ccccccccccccccccccccc
Confidence 457888888888887765421 1 67788888888887743 333222345677777776655
No 8
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.07 E-value=4.9e-07 Score=77.22 Aligned_cols=59 Identities=17% Similarity=0.149 Sum_probs=29.7
Q ss_pred CCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeec
Q 014141 160 LSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFC 222 (430)
Q Consensus 160 ~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c 222 (430)
+..|++|++|+|++..+++- .. ++.+++|+.|.+.++. ++.+.--..+++|+.|.+.++
T Consensus 64 l~~l~~L~~L~L~~n~i~~l--~~-~~~l~~L~~L~l~~n~-i~~l~~l~~l~~L~~L~l~~~ 122 (210)
T d1h6ta2 64 IQYLPNVTKLFLNGNKLTDI--KP-LANLKNLGWLFLDENK-VKDLSSLKDLKKLKSLSLEHN 122 (210)
T ss_dssp GGGCTTCCEEECCSSCCCCC--GG-GTTCTTCCEEECCSSC-CCCGGGGTTCTTCCEEECTTS
T ss_pred HhhCCCCCEEeCCCccccCc--cc-cccCcccccccccccc-ccccccccccccccccccccc
Confidence 34566666666666655431 11 3456666666666653 222221122345555555444
No 9
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.97 E-value=2.2e-06 Score=72.27 Aligned_cols=37 Identities=11% Similarity=0.175 Sum_probs=20.4
Q ss_pred CCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCC
Q 014141 161 SGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSP 200 (430)
Q Consensus 161 ~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~ 200 (430)
..|++|++|+|++..+++-. . +.++|+|+.|.+.++.
T Consensus 59 ~~l~nL~~L~Ls~N~l~~~~--~-l~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 59 EYLNNLTQINFSNNQLTDIT--P-LKNLTKLVDILMNNNQ 95 (199)
T ss_dssp GGCTTCCEEECCSSCCCCCG--G-GTTCTTCCEEECCSSC
T ss_pred ccCCCcCcCccccccccCcc--c-ccCCcccccccccccc
Confidence 45566666666666554311 1 4556666666666553
No 10
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.94 E-value=2.4e-06 Score=72.10 Aligned_cols=158 Identities=15% Similarity=0.203 Sum_probs=99.2
Q ss_pred CCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEE-E-eCCceeEEE
Q 014141 162 GIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIE-I-SAPNLLSFK 239 (430)
Q Consensus 162 ~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~-i-~~P~L~~L~ 239 (430)
.+++|++|.+.++.+++ +.. ++.+++|+.|.+.++. ++.+..-..+++|+.|.+.++. ...+. + ..+.|+.|.
T Consensus 38 ~l~~l~~L~l~~~~i~~--l~~-l~~l~nL~~L~Ls~N~-l~~~~~l~~l~~L~~L~l~~n~-~~~~~~l~~l~~L~~L~ 112 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS--IDG-VEYLNNLTQINFSNNQ-LTDITPLKNLTKLVDILMNNNQ-IADITPLANLTNLTGLT 112 (199)
T ss_dssp HHTTCCEEECTTSCCCC--CTT-GGGCTTCCEEECCSSC-CCCCGGGTTCTTCCEEECCSSC-CCCCGGGTTCTTCSEEE
T ss_pred HhcCCCEEECCCCCCCC--ccc-cccCCCcCcCcccccc-ccCcccccCCcccccccccccc-ccccccccccccccccc
Confidence 45778888888776654 221 5678999999998874 4433323456788888888765 22221 2 457888888
Q ss_pred Eecceee--eecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecccccCCCCccceEEEEEeecCc
Q 014141 240 YIGQDIN--LHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQREFPKLMNLNISFTAANQ 317 (430)
Q Consensus 240 ~~~~~~~--~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~ 317 (430)
+.+.... ..+..+++|+.+.+..+.... . .-+..+++++.|.+..+. +.....-..+++|++|+++...-
T Consensus 113 l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~----~~l~~~~~L~~L~l~~n~-l~~l~~l~~l~~L~~L~ls~N~i-- 184 (199)
T d2omxa2 113 LFNNQITDIDPLKNLTNLNRLELSSNTISD-I----SALSGLTSLQQLNFSSNQ-VTDLKPLANLTTLERLDISSNKV-- 184 (199)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEECCSSCCCC-C----GGGTTCTTCSEEECCSSC-CCCCGGGTTCTTCCEEECCSSCC--
T ss_pred ccccccccccccchhhhhHHhhhhhhhhcc-c----cccccccccccccccccc-ccCCccccCCCCCCEEECCCCCC--
Confidence 8766432 235567888888877443221 1 235678889999887765 43322123478888888855421
Q ss_pred cchhhHHHHHhhCCCceEE
Q 014141 318 ETLLGLSFIMKACPFLEKL 336 (430)
Q Consensus 318 ~~~~~l~~lL~~~p~L~~L 336 (430)
.+ + ..+..+++||+|
T Consensus 185 ~~---i-~~l~~L~~L~~L 199 (199)
T d2omxa2 185 SD---I-SVLAKLTNLESL 199 (199)
T ss_dssp CC---C-GGGGGCTTCSEE
T ss_pred CC---C-ccccCCCCCCcC
Confidence 12 2 235788888876
No 11
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.87 E-value=4.2e-06 Score=71.14 Aligned_cols=162 Identities=19% Similarity=0.216 Sum_probs=101.0
Q ss_pred CCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEE-E-eCCceeEEE
Q 014141 162 GIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIE-I-SAPNLLSFK 239 (430)
Q Consensus 162 ~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~-i-~~P~L~~L~ 239 (430)
.+.+|+.|.+.++.+++- .. +..+|+|++|.|.++. ++.+.....+++|+.|.+.++. +..+. + ..|+|+.|.
T Consensus 44 ~L~~L~~L~l~~~~i~~l--~~-l~~l~~L~~L~L~~n~-i~~l~~~~~l~~L~~L~l~~n~-i~~l~~l~~l~~L~~L~ 118 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSV--QG-IQYLPNVTKLFLNGNK-LTDIKPLANLKNLGWLFLDENK-VKDLSSLKDLKKLKSLS 118 (210)
T ss_dssp HHHTCCEEECTTSCCCCC--TT-GGGCTTCCEEECCSSC-CCCCGGGTTCTTCCEEECCSSC-CCCGGGGTTCTTCCEEE
T ss_pred HhcCccEEECcCCCCCCc--hh-HhhCCCCCEEeCCCcc-ccCccccccCcccccccccccc-ccccccccccccccccc
Confidence 356788888887766541 11 5678899999998874 3333323456788888888765 44332 1 357888888
Q ss_pred Eecceee--eecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecccccCCCCccceEEEEEeecCc
Q 014141 240 YIGQDIN--LHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQREFPKLMNLNISFTAANQ 317 (430)
Q Consensus 240 ~~~~~~~--~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~ 317 (430)
+.+.... -.+..++.++.+.+........ .....+++|+.+.+..+. +....--..+++|++|+++...
T Consensus 119 l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~~-----~~~~~l~~L~~l~l~~n~-l~~i~~l~~l~~L~~L~Ls~N~--- 189 (210)
T d1h6ta2 119 LEHNGISDINGLVHLPQLESLYLGNNKITDI-----TVLSRLTKLDTLSLEDNQ-ISDIVPLAGLTKLQNLYLSKNH--- 189 (210)
T ss_dssp CTTSCCCCCGGGGGCTTCCEEECCSSCCCCC-----GGGGGCTTCSEEECCSSC-CCCCGGGTTCTTCCEEECCSSC---
T ss_pred ccccccccccccccccccccccccccccccc-----cccccccccccccccccc-ccccccccCCCCCCEEECCCCC---
Confidence 8766432 1344567777777664432211 334678889999987776 4322112237888888885432
Q ss_pred cchhhHHHHHhhCCCceEEEEEE
Q 014141 318 ETLLGLSFIMKACPFLEKLVLQI 340 (430)
Q Consensus 318 ~~~~~l~~lL~~~p~L~~L~l~~ 340 (430)
...+. -+..+++|+.|+|..
T Consensus 190 --i~~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 190 --ISDLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp --CCBCG-GGTTCTTCSEEEEEE
T ss_pred --CCCCh-hhcCCCCCCEEEccC
Confidence 11222 367889999999864
No 12
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.73 E-value=3.1e-06 Score=68.86 Aligned_cols=79 Identities=15% Similarity=0.110 Sum_probs=50.6
Q ss_pred CCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEEE----eCCcee
Q 014141 161 SGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIEI----SAPNLL 236 (430)
Q Consensus 161 ~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~i----~~P~L~ 236 (430)
.++.+|++|+|++..++. ++.+...++.|+.|.|.++. ++.+.--..+++|+.|.+.++. +..+.- ..|+|+
T Consensus 15 ~n~~~lr~L~L~~n~I~~--i~~~~~~l~~L~~L~Ls~N~-i~~l~~~~~l~~L~~L~ls~N~-i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIPV--IENLGATLDQFDAIDFSDNE-IRKLDGFPLLRRLKTLLVNNNR-ICRIGEGLDQALPDLT 90 (162)
T ss_dssp ECTTSCEEEECTTSCCCS--CCCGGGGTTCCSEEECCSSC-CCEECCCCCCSSCCEEECCSSC-CCEECSCHHHHCTTCC
T ss_pred cCcCcCcEEECCCCCCCc--cCccccccccCCEEECCCCC-CCccCCcccCcchhhhhccccc-ccCCCccccccccccc
Confidence 456788889998887754 33445678889999998874 4443322355778888887776 444321 245666
Q ss_pred EEEEecc
Q 014141 237 SFKYIGQ 243 (430)
Q Consensus 237 ~L~~~~~ 243 (430)
.|.+.+.
T Consensus 91 ~L~L~~N 97 (162)
T d1a9na_ 91 ELILTNN 97 (162)
T ss_dssp EEECCSC
T ss_pred cceeccc
Confidence 6655554
No 13
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.73 E-value=6.2e-06 Score=75.68 Aligned_cols=143 Identities=15% Similarity=0.065 Sum_probs=85.4
Q ss_pred CCCCceEEEEEeecCc-chhhHHHHhhccCCCceEEEEecceeeecc-------cccCCCCccceEEEEEeecCccchhh
Q 014141 251 SLPQLVDVVFHVTPMV-QKMHCIGSIVSYLPQLKTLELDGCNEVFAQ-------FSQREFPKLMNLNISFTAANQETLLG 322 (430)
Q Consensus 251 ~~~~L~~~~i~~~~~~-~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~-------~l~~~~~~L~~L~l~~~~~~~~~~~~ 322 (430)
..+.|+.+.++.+... .....+...+..+++++.|.+..+. +... .....+++|++|+++...-+......
T Consensus 156 ~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~ 234 (344)
T d2ca6a1 156 NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA 234 (344)
T ss_dssp TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHH
T ss_pred cCcccceeecccccccccccccccchhhhhhhhccccccccc-ccccccccchhhhhcchhhhccccccccccccccccc
Confidence 4455666665543322 1223344666778899999997765 3321 11223788999988554222223445
Q ss_pred HHHHHhhCCCceEEEEEEeccccccccCcccc-----ccCcCCCccEEEEeeeecC-hhhHHHHHHHHhcccccccEEEe
Q 014141 323 LSFIMKACPFLEKLVLQIWNNGRRIGKKRHQI-----SKHSHQHLKLVELQGFNGR-EIDFELAFYVFENATMLEKMIIK 396 (430)
Q Consensus 323 l~~lL~~~p~L~~L~l~~~~~~~~~~~~~~~~-----~~~~~~~L~~v~i~~~~g~-~~e~~l~~~ll~~a~~Le~m~i~ 396 (430)
+...+..+|+|++|.+..+. ..+.+... ..+....|+.+.+.+-.-+ +.-..+++.+..+.+.|+++.+.
T Consensus 235 L~~~l~~~~~L~~L~Ls~n~----i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~ 310 (344)
T d2ca6a1 235 LAIALKSWPNLRELGLNDCL----LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELN 310 (344)
T ss_dssp HHHHGGGCTTCCEEECTTCC----CCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECT
T ss_pred ccccccccccchhhhhhcCc----cCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECC
Confidence 77889999999999884431 12211111 1345678999999874422 33344666555688999999875
Q ss_pred cC
Q 014141 397 PS 398 (430)
Q Consensus 397 ~~ 398 (430)
..
T Consensus 311 ~N 312 (344)
T d2ca6a1 311 GN 312 (344)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 14
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.66 E-value=6.1e-06 Score=72.86 Aligned_cols=189 Identities=18% Similarity=0.115 Sum_probs=98.0
Q ss_pred CCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEEEeCCceeEEEEecc
Q 014141 164 KSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIEISAPNLLSFKYIGQ 243 (430)
Q Consensus 164 ~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~i~~P~L~~L~~~~~ 243 (430)
++|++|+|.+..++.-. ...+.++++|++|.|.++. ++.+...+.+++|+.|.+.++. +..+.
T Consensus 31 ~~l~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~L~~N~-l~~l~~~~~l~~L~~L~Ls~N~-l~~~~-------------- 93 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFS-LATLMPYTRLTQLNLDRAE-LTKLQVDGTLPVLGTLDLSHNQ-LQSLP-------------- 93 (266)
T ss_dssp TTCCEEECTTSCCSEEE-GGGGTTCTTCCEEECTTSC-CCEEECCSCCTTCCEEECCSSC-CSSCC--------------
T ss_pred cCCCEEECcCCcCCCcC-HHHhhcccccccccccccc-cccccccccccccccccccccc-ccccc--------------
Confidence 67999999988665311 1235789999999999984 5555544566788888887664 22110
Q ss_pred eeeeecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecc--cccCCCCccceEEEEEeecCccchh
Q 014141 244 DINLHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQ--FSQREFPKLMNLNISFTAANQETLL 321 (430)
Q Consensus 244 ~~~~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~--~l~~~~~~L~~L~l~~~~~~~~~~~ 321 (430)
..+.++++|+.+.+.......... .....+.+++.|.+.... +... .....+++|+.|++....-...
T Consensus 94 ---~~~~~l~~L~~L~l~~~~~~~~~~---~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~l~~l~~l~l~~N~l~~~--- 163 (266)
T d1p9ag_ 94 ---LLGQTLPALTVLDVSFNRLTSLPL---GALRGLGELQELYLKGNE-LKTLPPGLLTPTPKLEKLSLANNNLTEL--- 163 (266)
T ss_dssp ---CCTTTCTTCCEEECCSSCCCCCCS---STTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCSCC---
T ss_pred ---cccccccccccccccccccceeec---cccccccccccccccccc-cceeccccccccccchhccccccccccc---
Confidence 112233444444443222111000 223455566666665544 2110 1111245566665533211111
Q ss_pred hHHHHHhhCCCceEEEEEEeccccccccCccccc-cCcCCCccEEEEee--eecChhhHHHHHHHHhcc
Q 014141 322 GLSFIMKACPFLEKLVLQIWNNGRRIGKKRHQIS-KHSHQHLKLVELQG--FNGREIDFELAFYVFENA 387 (430)
Q Consensus 322 ~l~~lL~~~p~L~~L~l~~~~~~~~~~~~~~~~~-~~~~~~L~~v~i~~--~~g~~~e~~l~~~ll~~a 387 (430)
-...+...++|++|++....- . ..+. .+..++|+.+.+.| +..+.+-..|.+++-.+.
T Consensus 164 -~~~~~~~l~~L~~L~Ls~N~L----~---~lp~~~~~~~~L~~L~L~~Np~~CdC~~~~l~~wl~~~~ 224 (266)
T d1p9ag_ 164 -PAGLLNGLENLDTLLLQENSL----Y---TIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNA 224 (266)
T ss_dssp -CTTTTTTCTTCCEEECCSSCC----C---CCCTTTTTTCCCSEEECCSCCBCCSGGGHHHHHHHHHTG
T ss_pred -CccccccccccceeecccCCC----c---ccChhHCCCCCCCEEEecCCCCCCCcchHHHHHHHHhcc
Confidence 113456677888887744211 1 1111 23456788888776 444544455666555443
No 15
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.43 E-value=2.1e-05 Score=72.80 Aligned_cols=188 Identities=16% Similarity=0.116 Sum_probs=116.4
Q ss_pred CCCCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEE--EeCCce
Q 014141 158 CGLSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIE--ISAPNL 235 (430)
Q Consensus 158 ~~~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~--i~~P~L 235 (430)
.....+++++.|.+.+..+++-. -...+++|+.|.+.++. ++.+..-..+++|+.|.+.++. +..+. -..|+|
T Consensus 191 ~~~~~l~~~~~l~l~~n~i~~~~---~~~~~~~L~~L~l~~n~-l~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~~L 265 (384)
T d2omza2 191 SVLAKLTNLESLIATNNQISDIT---PLGILTNLDELSLNGNQ-LKDIGTLASLTNLTDLDLANNQ-ISNLAPLSGLTKL 265 (384)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCG---GGGGCTTCCEEECCSSC-CCCCGGGGGCTTCSEEECCSSC-CCCCGGGTTCTTC
T ss_pred cccccccccceeeccCCccCCCC---cccccCCCCEEECCCCC-CCCcchhhcccccchhccccCc-cCCCCcccccccC
Confidence 34457789999999888665421 13568999999999884 3333222355889999988775 33221 135789
Q ss_pred eEEEEecceee--eecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecccccCCCCccceEEEEEe
Q 014141 236 LSFKYIGQDIN--LHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQREFPKLMNLNISFT 313 (430)
Q Consensus 236 ~~L~~~~~~~~--~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~~~~~~L~~L~l~~~ 313 (430)
++|.+.+.... ..+...+.+..+.+........ .-+..+++++.|.+..+. +........+++|++|++..+
T Consensus 266 ~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~-----~~~~~~~~l~~L~ls~n~-l~~l~~l~~l~~L~~L~L~~n 339 (384)
T d2omza2 266 TELKLGANQISNISPLAGLTALTNLELNENQLEDI-----SPISNLKNLTYLTLYFNN-ISDISPVSSLTKLQRLFFANN 339 (384)
T ss_dssp SEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCC-----GGGGGCTTCSEEECCSSC-CSCCGGGGGCTTCCEEECCSS
T ss_pred CEeeccCcccCCCCccccccccccccccccccccc-----cccchhcccCeEECCCCC-CCCCcccccCCCCCEEECCCC
Confidence 99988766442 1344566677666554332211 235778889999998776 433221234889999998553
Q ss_pred ecCccchhhHHHHHhhCCCceEEEEEEeccccccccCccccccCcCCCccEEEEee
Q 014141 314 AANQETLLGLSFIMKACPFLEKLVLQIWNNGRRIGKKRHQISKHSHQHLKLVELQG 369 (430)
Q Consensus 314 ~~~~~~~~~l~~lL~~~p~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~v~i~~ 369 (430)
.- ..+. -+..+|+|+.|++....- .+ .+.-..+++|+.+.+.+
T Consensus 340 ~l-----~~l~-~l~~l~~L~~L~l~~N~l----~~---l~~l~~l~~L~~L~L~~ 382 (384)
T d2omza2 340 KV-----SDVS-SLANLTNINWLSAGHNQI----SD---LTPLANLTRITQLGLND 382 (384)
T ss_dssp CC-----CCCG-GGGGCTTCCEEECCSSCC----CB---CGGGTTCTTCSEEECCC
T ss_pred CC-----CCCh-hHcCCCCCCEEECCCCcC----CC---ChhhccCCCCCEeeCCC
Confidence 21 1122 367899999999955321 11 11123457898888753
No 16
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.34 E-value=5.4e-05 Score=69.86 Aligned_cols=186 Identities=16% Similarity=0.176 Sum_probs=111.7
Q ss_pred HhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEE--EeCCceeEEEEecceee--eecCCCCCceEEE
Q 014141 184 FIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIE--ISAPNLLSFKYIGQDIN--LHVGSLPQLVDVV 259 (430)
Q Consensus 184 ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~--i~~P~L~~L~~~~~~~~--~~~~~~~~L~~~~ 259 (430)
....++.++.|.+.++.. +.+.....+++|+.|.+.++. +..+. -..++|+.+.+.+.... ..+..+++|+.+.
T Consensus 192 ~~~~l~~~~~l~l~~n~i-~~~~~~~~~~~L~~L~l~~n~-l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~ 269 (384)
T d2omza2 192 VLAKLTNLESLIATNNQI-SDITPLGILTNLDELSLNGNQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 269 (384)
T ss_dssp GGGGCTTCSEEECCSSCC-CCCGGGGGCTTCCEEECCSSC-CCCCGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEE
T ss_pred ccccccccceeeccCCcc-CCCCcccccCCCCEEECCCCC-CCCcchhhcccccchhccccCccCCCCcccccccCCEee
Confidence 356789999999887742 222222344789999988775 33332 14578888888876442 2356788899888
Q ss_pred EEeecCcchhhHHHHhhccCCCceEEEEecceeeecccccCCCCccceEEEEEeecCccchhhHHHHHhhCCCceEEEEE
Q 014141 260 FHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQREFPKLMNLNISFTAANQETLLGLSFIMKACPFLEKLVLQ 339 (430)
Q Consensus 260 i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~l~~lL~~~p~L~~L~l~ 339 (430)
++....... .-+..++.++.+.+..+. +........++++++|+++...-. + +. -+..+|+|++|++.
T Consensus 270 l~~~~l~~~-----~~~~~~~~l~~l~~~~n~-l~~~~~~~~~~~l~~L~ls~n~l~--~---l~-~l~~l~~L~~L~L~ 337 (384)
T d2omza2 270 LGANQISNI-----SPLAGLTALTNLELNENQ-LEDISPISNLKNLTYLTLYFNNIS--D---IS-PVSSLTKLQRLFFA 337 (384)
T ss_dssp CCSSCCCCC-----GGGTTCTTCSEEECCSSC-CSCCGGGGGCTTCSEEECCSSCCS--C---CG-GGGGCTTCCEEECC
T ss_pred ccCcccCCC-----Cccccccccccccccccc-cccccccchhcccCeEECCCCCCC--C---Cc-ccccCCCCCEEECC
Confidence 875443211 124567778888876655 332222333788888888554221 1 21 26789999999995
Q ss_pred EeccccccccCccccccCcCCCccEEEEeeeecChhhHHHHHHHHhcccccccEEEe
Q 014141 340 IWNNGRRIGKKRHQISKHSHQHLKLVELQGFNGREIDFELAFYVFENATMLEKMIIK 396 (430)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~L~~v~i~~~~g~~~e~~l~~~ll~~a~~Le~m~i~ 396 (430)
... .... +.-..+++|+.+.+.+-+=.. + .. +.+.+.|+.+.|.
T Consensus 338 ~n~----l~~l---~~l~~l~~L~~L~l~~N~l~~--l--~~--l~~l~~L~~L~L~ 381 (384)
T d2omza2 338 NNK----VSDV---SSLANLTNINWLSAGHNQISD--L--TP--LANLTRITQLGLN 381 (384)
T ss_dssp SSC----CCCC---GGGGGCTTCCEEECCSSCCCB--C--GG--GTTCTTCSEEECC
T ss_pred CCC----CCCC---hhHcCCCCCCEEECCCCcCCC--C--hh--hccCCCCCEeeCC
Confidence 531 1111 111235789999887632111 1 01 4678888888764
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.32 E-value=0.0001 Score=62.86 Aligned_cols=144 Identities=15% Similarity=0.155 Sum_probs=78.0
Q ss_pred CCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEE-EeCCceeEE
Q 014141 160 LSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIE-ISAPNLLSF 238 (430)
Q Consensus 160 ~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~-i~~P~L~~L 238 (430)
+..+++|+.|.+.++.+++ +.. +..++.|+.|.+.+|.......+ ...+.++.+.+.++....... ...++|+.|
T Consensus 81 l~~l~~l~~l~~~~n~~~~--i~~-l~~l~~L~~l~l~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L 156 (227)
T d1h6ua2 81 LKNLTKITELELSGNPLKN--VSA-IAGLQSIKTLDLTSTQITDVTPL-AGLSNLQVLYLDLNQITNISPLAGLTNLQYL 156 (227)
T ss_dssp GTTCCSCCEEECCSCCCSC--CGG-GTTCTTCCEEECTTSCCCCCGGG-TTCTTCCEEECCSSCCCCCGGGGGCTTCCEE
T ss_pred ccccccccccccccccccc--ccc-ccccccccccccccccccccchh-ccccchhhhhchhhhhchhhhhccccccccc
Confidence 4688999999999887653 222 56899999999998864332111 223566666665554111111 134455555
Q ss_pred EEecceeeeecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecccccCCCCccceEEEEEeecCcc
Q 014141 239 KYIGQDINLHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQREFPKLMNLNISFTAANQE 318 (430)
Q Consensus 239 ~~~~~~~~~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~ 318 (430)
.+.+.... .. .-+.++++|+.|++.++. +.....-..+++|++|+++.+.
T Consensus 157 ~l~~n~~~--------------------~~-----~~l~~l~~L~~L~Ls~n~-l~~l~~l~~l~~L~~L~Ls~N~---- 206 (227)
T d1h6ua2 157 SIGNAQVS--------------------DL-----TPLANLSKLTTLKADDNK-ISDISPLASLPNLIEVHLKNNQ---- 206 (227)
T ss_dssp ECCSSCCC--------------------CC-----GGGTTCTTCCEEECCSSC-CCCCGGGGGCTTCCEEECTTSC----
T ss_pred cccccccc--------------------cc-----hhhcccccceecccCCCc-cCCChhhcCCCCCCEEECcCCc----
Confidence 55443221 00 113455666666665554 3221111236667777664321
Q ss_pred chhhHHHHHhhCCCceEEEEE
Q 014141 319 TLLGLSFIMKACPFLEKLVLQ 339 (430)
Q Consensus 319 ~~~~l~~lL~~~p~L~~L~l~ 339 (430)
...+. -++++++|+.|+|.
T Consensus 207 -lt~i~-~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 207 -ISDVS-PLANTSNLFIVTLT 225 (227)
T ss_dssp -CCBCG-GGTTCTTCCEEEEE
T ss_pred -CCCCc-ccccCCCCCEEEee
Confidence 11111 25677777777774
No 18
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.07 E-value=5.5e-05 Score=71.35 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=56.9
Q ss_pred CCCCCceEEEeeEEEcchhH---HHHhhcCCcccceeeccCCCCcee---eE----ecCCCCcceEEEeecCCccEE---
Q 014141 162 GIKSLRSLTLCAVNVTGEVV---EFFIHNCPLLENLRITQSPDLLSL---KV----VGSSIPLKCLDIQFCYSIKEI--- 228 (430)
Q Consensus 162 ~~~~L~~L~L~~~~~~~~~l---~~ll~~cp~Le~L~L~~~~~~~~~---~i----~~~~~~L~~L~l~~c~~l~~i--- 228 (430)
.+++|++|.|.+|.+++..+ ...+..||+|++|+|.++. +++. .+ .....+|+.|.+.+|. +...
T Consensus 25 ~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~~~~~l~~~l~~~~~~L~~L~L~~n~-it~~~~~ 102 (460)
T d1z7xw1 25 LLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE-LGDVGVHCVLQGLQTPSCKIQKLSLQNCC-LTGAGCG 102 (460)
T ss_dssp HHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHHHHHTTCSTTCCCCEEECTTSC-CBGGGHH
T ss_pred hCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCc-CChHHHHHHHHHHhcCCCCCCEEECCCCC-ccccccc
Confidence 56999999999999987654 4557899999999999874 3211 11 1123579999999886 3221
Q ss_pred -----EEeCCceeEEEEecc
Q 014141 229 -----EISAPNLLSFKYIGQ 243 (430)
Q Consensus 229 -----~i~~P~L~~L~~~~~ 243 (430)
-...++|++|.+.+.
T Consensus 103 ~l~~~l~~~~~L~~L~L~~N 122 (460)
T d1z7xw1 103 VLSSTLRTLPTLQELHLSDN 122 (460)
T ss_dssp HHHHHTTSCTTCCEEECCSS
T ss_pred cccchhhccccccccccccc
Confidence 113578999988764
No 19
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.85 E-value=0.00026 Score=61.91 Aligned_cols=161 Identities=14% Similarity=0.115 Sum_probs=91.4
Q ss_pred CCCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecCCccEEE----EeCCc
Q 014141 159 GLSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCYSIKEIE----ISAPN 234 (430)
Q Consensus 159 ~~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~~l~~i~----i~~P~ 234 (430)
.+.++++|++|+|.+..++. +.. .+..|.|+.|.|.++..-........+++|+.|.+.++.. ..+. ...++
T Consensus 50 ~f~~l~~L~~L~L~~N~l~~--l~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~-~~~~~~~~~~l~~ 125 (266)
T d1p9ag_ 50 TLMPYTRLTQLNLDRAELTK--LQV-DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRL-TSLPLGALRGLGE 125 (266)
T ss_dssp GGTTCTTCCEEECTTSCCCE--EEC-CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCC-CCCCSSTTTTCTT
T ss_pred Hhhccccccccccccccccc--ccc-cccccccccccccccccccccccccccccccccccccccc-ceeeccccccccc
Confidence 34678999999999886653 111 3578999999999875332222334557888888877652 2221 12356
Q ss_pred eeEEEEecceee----eecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecccccCC---CCccce
Q 014141 235 LLSFKYIGQDIN----LHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQRE---FPKLMN 307 (430)
Q Consensus 235 L~~L~~~~~~~~----~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~~~---~~~L~~ 307 (430)
++.|.+.+.... ..+..++.++.+.+..+..... ....+..+++|+.|+|+.+. +. .+|.. .++|+.
T Consensus 126 l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~-L~--~lp~~~~~~~~L~~ 199 (266)
T d1p9ag_ 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL---PAGLLNGLENLDTLLLQENS-LY--TIPKGFFGSHLLPF 199 (266)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC---CTTTTTTCTTCCEEECCSSC-CC--CCCTTTTTTCCCSE
T ss_pred cccccccccccceeccccccccccchhccccccccccc---CccccccccccceeecccCC-Cc--ccChhHCCCCCCCE
Confidence 777777665332 1233456666666654322210 01345667778888877665 33 23333 456666
Q ss_pred EEEEEee-cCccchhhHHHHHhh
Q 014141 308 LNISFTA-ANQETLLGLSFIMKA 329 (430)
Q Consensus 308 L~l~~~~-~~~~~~~~l~~lL~~ 329 (430)
|.|...- ..+....++..+++.
T Consensus 200 L~L~~Np~~CdC~~~~l~~wl~~ 222 (266)
T d1p9ag_ 200 AFLHGNPWLCNCEILYFRRWLQD 222 (266)
T ss_dssp EECCSCCBCCSGGGHHHHHHHHH
T ss_pred EEecCCCCCCCcchHHHHHHHHh
Confidence 6664321 112344455555553
No 20
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.79 E-value=6.3e-05 Score=68.70 Aligned_cols=114 Identities=18% Similarity=0.138 Sum_probs=57.1
Q ss_pred CCCCceEEEEEeecCcch-hhH-HHHhhccCCCceEEEEecceeeeccc---c---cCCCCccceEEEEEeecCccchhh
Q 014141 251 SLPQLVDVVFHVTPMVQK-MHC-IGSIVSYLPQLKTLELDGCNEVFAQF---S---QREFPKLMNLNISFTAANQETLLG 322 (430)
Q Consensus 251 ~~~~L~~~~i~~~~~~~~-~~~-~~~l~~~~~~l~~L~l~~~~~~~~~~---l---~~~~~~L~~L~l~~~~~~~~~~~~ 322 (430)
..+.|+.+.+..+..... ... +...+..+++|+.|++..+. +.... + ...+++|++|+|+.+.-+......
T Consensus 184 ~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~-i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~ 262 (344)
T d2ca6a1 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262 (344)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSC-CHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred hhhhhcccccccccccccccccchhhhhcchhhhccccccccc-ccccccccccccccccccchhhhhhcCccCchhhHH
Confidence 345666666654432211 111 22456677778888876655 32211 1 122677777777554323233444
Q ss_pred HHHHHhhC--CCceEEEEEEeccccccccCccc--cc--cCcCCCccEEEEee
Q 014141 323 LSFIMKAC--PFLEKLVLQIWNNGRRIGKKRHQ--IS--KHSHQHLKLVELQG 369 (430)
Q Consensus 323 l~~lL~~~--p~L~~L~l~~~~~~~~~~~~~~~--~~--~~~~~~L~~v~i~~ 369 (430)
+...+..+ +.|++|+|.... ..+.+.. .. ....++|+.+.+.|
T Consensus 263 l~~~l~~~~~~~L~~L~ls~N~----i~~~~~~~l~~~l~~~~~~L~~L~l~~ 311 (344)
T d2ca6a1 263 VVDAFSKLENIGLQTLRLQYNE----IELDAVRTLKTVIDEKMPDLLFLELNG 311 (344)
T ss_dssp HHHHHHTCSSCCCCEEECCSSC----CBHHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred HHHHhhhccCCCCCEEECCCCc----CChHHHHHHHHHHHccCCCCCEEECCC
Confidence 55666554 467777775421 1111111 11 11345688887765
No 21
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=96.69 E-value=0.00084 Score=59.66 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=27.1
Q ss_pred CCCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCC
Q 014141 159 GLSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSP 200 (430)
Q Consensus 159 ~~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~ 200 (430)
.+.++++|++|.+.++.+..- ....+.+++.|+.|.+.++.
T Consensus 50 ~f~~l~~L~~L~l~~n~~~~i-~~~~f~~l~~L~~L~l~~n~ 90 (305)
T d1xkua_ 50 DFKNLKNLHTLILINNKISKI-SPGAFAPLVKLERLYLSKNQ 90 (305)
T ss_dssp TTTTCTTCCEEECCSSCCCCB-CTTTTTTCTTCCEEECCSSC
T ss_pred Hhhcccccccccccccccccc-chhhhhCCCccCEecccCCc
Confidence 456778888888887765431 12235677888888887763
No 22
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.68 E-value=0.00059 Score=54.74 Aligned_cols=128 Identities=13% Similarity=0.115 Sum_probs=69.6
Q ss_pred hcCCcccceeeccCCCCcee-eEecCCCCcceEEEeecCCccEEEEeCCceeEEEEecceeeeecCCCCCceEEEEEeec
Q 014141 186 HNCPLLENLRITQSPDLLSL-KVVGSSIPLKCLDIQFCYSIKEIEISAPNLLSFKYIGQDINLHVGSLPQLVDVVFHVTP 264 (430)
Q Consensus 186 ~~cp~Le~L~L~~~~~~~~~-~i~~~~~~L~~L~l~~c~~l~~i~i~~P~L~~L~~~~~~~~~~~~~~~~L~~~~i~~~~ 264 (430)
..+..|++|+|.++. ++.+ .+...+++|+.|.++++. +..+.- +..+++|+.+.+..+.
T Consensus 15 ~n~~~lr~L~L~~n~-I~~i~~~~~~l~~L~~L~Ls~N~-i~~l~~------------------~~~l~~L~~L~ls~N~ 74 (162)
T d1a9na_ 15 TNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNE-IRKLDG------------------FPLLRRLKTLLVNNNR 74 (162)
T ss_dssp ECTTSCEEEECTTSC-CCSCCCGGGGTTCCSEEECCSSC-CCEECC------------------CCCCSSCCEEECCSSC
T ss_pred cCcCcCcEEECCCCC-CCccCccccccccCCEEECCCCC-CCccCC------------------cccCcchhhhhccccc
Confidence 357789999999885 3332 222345778888887765 443321 2234444444444332
Q ss_pred CcchhhHHHHhhccCCCceEEEEecceeeecc-c--ccCCCCccceEEEEEeecCccchhh-HHHHHhhCCCceEEEEE
Q 014141 265 MVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQ-F--SQREFPKLMNLNISFTAANQETLLG-LSFIMKACPFLEKLVLQ 339 (430)
Q Consensus 265 ~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~-~--l~~~~~~L~~L~l~~~~~~~~~~~~-l~~lL~~~p~L~~L~l~ 339 (430)
...... .++..+++++.|.+..+. +... . ....+++|++|++...... .... -..++..+|+|+.|+-.
T Consensus 75 i~~l~~---~~~~~l~~L~~L~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i~--~~~~~r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 75 ICRIGE---GLDQALPDLTELILTNNS-LVELGDLDPLASLKSLTYLCILRNPVT--NKKHYRLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp CCEECS---CHHHHCTTCCEEECCSCC-CCCGGGGGGGGGCTTCCEEECCSSGGG--GSTTHHHHHHHHCTTCSEETTE
T ss_pred ccCCCc---cccccccccccceecccc-ccccccccccccccccchhhcCCCccc--cccchHHHHHHHCCCcCeeCCC
Confidence 211000 234567778888877665 3321 1 1123777888877543211 1111 23467889999988643
No 23
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.38 E-value=0.0012 Score=58.13 Aligned_cols=196 Identities=12% Similarity=0.052 Sum_probs=84.2
Q ss_pred CCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEe--cCCCCcceEEEeecCCccEEEE----eCCceeE
Q 014141 164 KSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVV--GSSIPLKCLDIQFCYSIKEIEI----SAPNLLS 237 (430)
Q Consensus 164 ~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~--~~~~~L~~L~l~~c~~l~~i~i----~~P~L~~ 237 (430)
+++++|+|++..++.-. ...+.+++.|+.|.+.+... ..+... ..+..++.+.+.....+..+.- ..++|++
T Consensus 32 ~~~~~L~Ls~N~i~~i~-~~~f~~l~~L~~L~ls~n~l-~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~ 109 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVP-AASFRACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (284)
T ss_dssp TTCSEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCC-CEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCEEECcCCcCCCCC-HHHhhccccccccccccccc-cccccccccccccccccccccccccccccchhhcccccCCE
Confidence 34566666555443200 11244556666666654421 111111 1123444444433332222211 2355666
Q ss_pred EEEecceee----eecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecc--cccCCCCccceEEEE
Q 014141 238 FKYIGQDIN----LHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQ--FSQREFPKLMNLNIS 311 (430)
Q Consensus 238 L~~~~~~~~----~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~--~l~~~~~~L~~L~l~ 311 (430)
|.+.+.... ..+...+.|+.+.+..+....... ..+..+++++.|++..+. +... .....+++|+.|.+.
T Consensus 110 L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~---~~f~~~~~L~~L~l~~N~-l~~l~~~~f~~l~~L~~l~l~ 185 (284)
T d1ozna_ 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD---DTFRDLGNLTHLFLHGNR-ISSVPERAFRGLHSLDRLLLH 185 (284)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT---TTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECC
T ss_pred EecCCcccccccccccchhcccchhhhccccccccCh---hHhccccchhhcccccCc-ccccchhhhccccccchhhhh
Confidence 655544321 122334555555555332211000 334566777777776654 3211 111124555555553
Q ss_pred EeecCccchhhHHHHHhhCCCceEEEEEEeccccccccCccccc-cCcCCCccEEEEee--eecChh
Q 014141 312 FTAANQETLLGLSFIMKACPFLEKLVLQIWNNGRRIGKKRHQIS-KHSHQHLKLVELQG--FNGREI 375 (430)
Q Consensus 312 ~~~~~~~~~~~l~~lL~~~p~L~~L~l~~~~~~~~~~~~~~~~~-~~~~~~L~~v~i~~--~~g~~~ 375 (430)
...-. .. ....+..+++|+.|++....- . +..+. -..+.+|+.+.+.| +.++.+
T Consensus 186 ~N~l~--~i--~~~~f~~l~~L~~L~l~~N~i----~--~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 186 QNRVA--HV--HPHAFRDLGRLMTLYLFANNL----S--ALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp SSCCC--EE--CTTTTTTCTTCCEEECCSSCC----S--CCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred hcccc--cc--ChhHhhhhhhccccccccccc----c--cccccccccccccCEEEecCCCCCCCcc
Confidence 32111 11 124456777788777743211 0 01011 12346677777766 445443
No 24
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.21 E-value=0.0019 Score=56.64 Aligned_cols=172 Identities=16% Similarity=0.109 Sum_probs=109.2
Q ss_pred CCCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEe--cCCCCcceEEEeecCCccEEE----EeC
Q 014141 159 GLSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVV--GSSIPLKCLDIQFCYSIKEIE----ISA 232 (430)
Q Consensus 159 ~~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~--~~~~~L~~L~l~~c~~l~~i~----i~~ 232 (430)
.+.++++|++|++++..+..-. ......++.++.+.......+..+... ..+++|+.|.+.++.. ..+. ...
T Consensus 51 ~f~~l~~L~~L~ls~n~l~~i~-~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~-~~~~~~~~~~~ 128 (284)
T d1ozna_ 51 SFRACRNLTILWLHSNVLARID-AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL-QELGPGLFRGL 128 (284)
T ss_dssp TTTTCTTCCEEECCSSCCCEEC-TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCC-CCCCTTTTTTC
T ss_pred Hhhccccccccccccccccccc-cccccccccccccccccccccccccchhhcccccCCEEecCCccc-ccccccccchh
Confidence 4678899999999887664321 123456888888887766555544222 2457899999987762 2221 235
Q ss_pred CceeEEEEecceee----eecCCCCCceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeecccccCC---CCcc
Q 014141 233 PNLLSFKYIGQDIN----LHVGSLPQLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQFSQRE---FPKL 305 (430)
Q Consensus 233 P~L~~L~~~~~~~~----~~~~~~~~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~l~~~---~~~L 305 (430)
++|+.+.+.+..+. -.+...+.|+.+.+..+....... ..+.++++|+.+.+..+. +.. ..|.. +++|
T Consensus 129 ~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~---~~f~~l~~L~~l~l~~N~-l~~-i~~~~f~~l~~L 203 (284)
T d1ozna_ 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE---RAFRGLHSLDRLLLHQNR-VAH-VHPHAFRDLGRL 203 (284)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT---TTTTTCTTCCEEECCSSC-CCE-ECTTTTTTCTTC
T ss_pred cccchhhhccccccccChhHhccccchhhcccccCcccccch---hhhccccccchhhhhhcc-ccc-cChhHhhhhhhc
Confidence 67888888876443 124567788888877543321111 445788999999998766 321 22322 6778
Q ss_pred ceEEEEEeecCccchhhHHHHHhhCCCceEEEEEEe
Q 014141 306 MNLNISFTAANQETLLGLSFIMKACPFLEKLVLQIW 341 (430)
Q Consensus 306 ~~L~l~~~~~~~~~~~~l~~lL~~~p~L~~L~l~~~ 341 (430)
++|+++...-. . .....+..+++|+.|.+...
T Consensus 204 ~~L~l~~N~i~--~--~~~~~~~~~~~L~~L~l~~N 235 (284)
T d1ozna_ 204 MTLYLFANNLS--A--LPTEALAPLRALQYLRLNDN 235 (284)
T ss_dssp CEEECCSSCCS--C--CCHHHHTTCTTCCEEECCSS
T ss_pred ccccccccccc--c--ccccccccccccCEEEecCC
Confidence 88887543221 1 12457789999999998654
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.15 E-value=0.00041 Score=52.99 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=28.3
Q ss_pred CCCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCC
Q 014141 159 GLSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSP 200 (430)
Q Consensus 159 ~~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~ 200 (430)
.+.++++|++|+|++..++. +..-++.+++|+.|.+.++.
T Consensus 15 ~l~~l~~L~~L~ls~N~l~~--lp~~~~~l~~L~~L~l~~N~ 54 (124)
T d1dcea3 15 HLEQLLLVTHLDLSHNRLRA--LPPALAALRCLEVLQASDNA 54 (124)
T ss_dssp CGGGGTTCCEEECCSSCCCC--CCGGGGGCTTCCEEECCSSC
T ss_pred ccccCCCCCEEECCCCccCc--chhhhhhhhccccccccccc
Confidence 35677888888888877653 32235678888888888763
No 26
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.12 E-value=0.006 Score=51.76 Aligned_cols=169 Identities=15% Similarity=0.093 Sum_probs=90.5
Q ss_pred CCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEe--cCCCCcceEEEeecCCccEEE----EeCCceeE
Q 014141 164 KSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVV--GSSIPLKCLDIQFCYSIKEIE----ISAPNLLS 237 (430)
Q Consensus 164 ~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~--~~~~~L~~L~l~~c~~l~~i~----i~~P~L~~ 237 (430)
+++++|+|.+..++.-. ...+.++++|++|.+.++.....+... ..++.++.+.+..+..+..+. -..|+|+.
T Consensus 29 ~~l~~L~Ls~n~i~~l~-~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~ 107 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQ-KGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 107 (242)
T ss_dssp SCCSEEEEESCCCCEEC-TTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCE
T ss_pred CCCCEEECcCCcCCccC-hhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccc
Confidence 68999999987664210 123578999999999988654443221 245788898888776655543 34689999
Q ss_pred EEEecceeee--ecCCCCCceEEEEEeecCcchhhHHH-HhhccC-CCceEEEEecceeeecccccCC-CCccceEEEEE
Q 014141 238 FKYIGQDINL--HVGSLPQLVDVVFHVTPMVQKMHCIG-SIVSYL-PQLKTLELDGCNEVFAQFSQRE-FPKLMNLNISF 312 (430)
Q Consensus 238 L~~~~~~~~~--~~~~~~~L~~~~i~~~~~~~~~~~~~-~l~~~~-~~l~~L~l~~~~~~~~~~l~~~-~~~L~~L~l~~ 312 (430)
+.+.+..... .......+..+......... ...+. ..+.++ ..+..|.+.... +. .++.. |...+-+.+..
T Consensus 108 l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~-l~~i~~~~~~~~~~~l~~L~l~~n~-l~--~i~~~~~~~~~l~~~~~ 183 (242)
T d1xwdc1 108 LLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN-IHTIERNSFVGLSFESVILWLNKNG-IQ--EIHNCAFNGTQLDELNL 183 (242)
T ss_dssp EEEESCCCCSCCCCTTTCBSSCEEEEEESCTT-CCEECTTSSTTSBSSCEEEECCSSC-CC--EECTTTTTTCCEEEEEC
T ss_pred cccchhhhcccccccccccccccccccccccc-cccccccccccccccceeeeccccc-cc--ccccccccchhhhcccc
Confidence 9998764421 12234445555443322110 01110 112222 366667765544 22 12222 33222222322
Q ss_pred eecCccchhhH-HHHHhhCCCceEEEEE
Q 014141 313 TAANQETLLGL-SFIMKACPFLEKLVLQ 339 (430)
Q Consensus 313 ~~~~~~~~~~l-~~lL~~~p~L~~L~l~ 339 (430)
... .....+ ...+..+|+|+.|+|.
T Consensus 184 l~~--n~l~~l~~~~f~~l~~L~~L~Ls 209 (242)
T d1xwdc1 184 SDN--NNLEELPNDVFHGASGPVILDIS 209 (242)
T ss_dssp TTC--TTCCCCCTTTTTTSCCCSEEECT
T ss_pred ccc--cccccccHHHhcCCCCCCEEECC
Confidence 111 112122 2346788999999883
No 27
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=95.94 E-value=3.4e-05 Score=64.70 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=36.5
Q ss_pred CCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceee-EecCCCCcceEEEeec
Q 014141 160 LSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLK-VVGSSIPLKCLDIQFC 222 (430)
Q Consensus 160 ~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~-i~~~~~~L~~L~l~~c 222 (430)
+..+++|++|+|++..+++ +.. +.++++|+.|.|.++. ++.+. +....++|+.|.+.++
T Consensus 44 l~~L~~L~~L~Ls~n~I~~--i~~-l~~l~~L~~L~Ls~N~-i~~i~~~~~~~~~L~~L~l~~N 103 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEK--ISS-LSGMENLRILSLGRNL-IKKIENLDAVADTLEELWISYN 103 (198)
T ss_dssp HHHTTTCCEEECSEEEESC--CCC-HHHHTTCCEEECCEEE-ECSCSSHHHHHHHCCEEECSEE
T ss_pred HhcccccceeECcccCCCC--ccc-ccCCccccChhhcccc-cccccccccccccccccccccc
Confidence 3467889999999888864 221 5678889999988773 22221 1111245666666554
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.74 E-value=0.0057 Score=51.89 Aligned_cols=65 Identities=22% Similarity=0.252 Sum_probs=41.7
Q ss_pred CCCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEe--cCCCCcceEEEeecC
Q 014141 159 GLSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVV--GSSIPLKCLDIQFCY 223 (430)
Q Consensus 159 ~~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~--~~~~~L~~L~l~~c~ 223 (430)
.+.++++|++|.|.+..+....-...+.+++.+++|.+..+..+..+... ..+++|+.|.+.++.
T Consensus 48 ~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 48 AFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTG 114 (242)
T ss_dssp TTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCC
T ss_pred Hhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccccchhh
Confidence 35678999999998774332100112456888888888777655443222 345788888888764
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=95.72 E-value=0.00019 Score=59.91 Aligned_cols=41 Identities=7% Similarity=0.109 Sum_probs=26.5
Q ss_pred HHHhhcCCcccceeeccCCCCceeeEecCCCCcceEEEeecC
Q 014141 182 EFFIHNCPLLENLRITQSPDLLSLKVVGSSIPLKCLDIQFCY 223 (430)
Q Consensus 182 ~~ll~~cp~Le~L~L~~~~~~~~~~i~~~~~~L~~L~l~~c~ 223 (430)
..-++..++|+.|.|.++. ++.+.--..+++|+.|.++++.
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~-I~~i~~l~~l~~L~~L~Ls~N~ 81 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNN-IEKISSLSGMENLRILSLGRNL 81 (198)
T ss_dssp HHHHHHTTTCCEEECSEEE-ESCCCCHHHHTTCCEEECCEEE
T ss_pred hhHHhcccccceeECcccC-CCCcccccCCccccChhhcccc
Confidence 3446778999999998773 3333211234678888877664
No 30
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=95.63 E-value=0.0012 Score=58.88 Aligned_cols=59 Identities=12% Similarity=0.006 Sum_probs=28.4
Q ss_pred hccCCCceEEEEecceeeecccccC--CCCccceEEEEEeecCccchhhHHHHHhhCCCceEEEEEE
Q 014141 276 VSYLPQLKTLELDGCNEVFAQFSQR--EFPKLMNLNISFTAANQETLLGLSFIMKACPFLEKLVLQI 340 (430)
Q Consensus 276 ~~~~~~l~~L~l~~~~~~~~~~l~~--~~~~L~~L~l~~~~~~~~~~~~l~~lL~~~p~L~~L~l~~ 340 (430)
...+++++.+.+.... +.. ..+. .+++|+.|+++...- . ..++.-+.++|+|+.|+++.
T Consensus 217 ~~~~~~l~~l~~~~~~-l~~-~~~~~~~~~~L~~L~Ls~N~l---~-g~iP~~l~~L~~L~~L~Ls~ 277 (313)
T d1ogqa_ 217 FGSDKNTQKIHLAKNS-LAF-DLGKVGLSKNLNGLDLRNNRI---Y-GTLPQGLTQLKFLHSLNVSF 277 (313)
T ss_dssp CCTTSCCSEEECCSSE-ECC-BGGGCCCCTTCCEEECCSSCC---E-ECCCGGGGGCTTCCEEECCS
T ss_pred cccccccccccccccc-ccc-cccccccccccccccCccCee---c-ccCChHHhCCCCCCEEECcC
Confidence 3455566666665544 211 1111 155666666633211 0 02334455667777777643
No 31
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=95.54 E-value=0.0023 Score=56.87 Aligned_cols=89 Identities=21% Similarity=0.256 Sum_probs=53.5
Q ss_pred CCCCCCCCCCCCceEEEeeE-EEcchhHHHHhhcCCcccceeeccCCCCcee-eEecCCCCcceEEEeecCCccEEE--E
Q 014141 155 QSGCGLSGIKSLRSLTLCAV-NVTGEVVEFFIHNCPLLENLRITQSPDLLSL-KVVGSSIPLKCLDIQFCYSIKEIE--I 230 (430)
Q Consensus 155 ~~p~~~~~~~~L~~L~L~~~-~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~-~i~~~~~~L~~L~l~~c~~l~~i~--i 230 (430)
.+|+.++++++|++|+|.++ .+.+ .+..-++.+++|+.|+|.++...... .......+|+.+.+..+.....+. +
T Consensus 67 ~lp~~l~~L~~L~~L~Ls~~N~l~g-~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l 145 (313)
T d1ogqa_ 67 PIPSSLANLPYLNFLYIGGINNLVG-PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145 (313)
T ss_dssp ECCGGGGGCTTCSEEEEEEETTEES-CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGG
T ss_pred CCChHHhcCcccccccccccccccc-ccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhh
Confidence 35566788999999999875 3432 23334678899999999988532211 112234677777776543211110 1
Q ss_pred -eCCceeEEEEecce
Q 014141 231 -SAPNLLSFKYIGQD 244 (430)
Q Consensus 231 -~~P~L~~L~~~~~~ 244 (430)
..+.|+.+.+.+..
T Consensus 146 ~~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 146 SSLPNLVGITFDGNR 160 (313)
T ss_dssp GGCTTCCEEECCSSC
T ss_pred ccCcccceeeccccc
Confidence 34667777766553
No 32
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.88 E-value=0.0061 Score=49.88 Aligned_cols=79 Identities=14% Similarity=0.056 Sum_probs=44.7
Q ss_pred CCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCcee-eEecCCCCcceEEEeecCCccEEEE----eCCceeEE
Q 014141 164 KSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSL-KVVGSSIPLKCLDIQFCYSIKEIEI----SAPNLLSF 238 (430)
Q Consensus 164 ~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~-~i~~~~~~L~~L~l~~c~~l~~i~i----~~P~L~~L 238 (430)
+++++|.|++..++...-...+.+.++|+.|.|.+....... ..-...++|+.|.+++.. +..+.- ..|+|+.|
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~-l~~l~~~~F~~l~~L~~L 107 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK-IKEISNKMFLGLHQLKTL 107 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC-CCEECSSSSTTCTTCCEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc-ccccCHHHHhCCCccccc
Confidence 688999998887754222334567888999998876432211 111234667777776654 333321 12455555
Q ss_pred EEecc
Q 014141 239 KYIGQ 243 (430)
Q Consensus 239 ~~~~~ 243 (430)
++.+.
T Consensus 108 ~L~~N 112 (192)
T d1w8aa_ 108 NLYDN 112 (192)
T ss_dssp ECCSS
T ss_pred ccCCc
Confidence 55444
No 33
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=94.88 E-value=0.0076 Score=48.14 Aligned_cols=24 Identities=8% Similarity=0.127 Sum_probs=15.7
Q ss_pred hhHHHHhhcCCcccceeeccCCCC
Q 014141 179 EVVEFFIHNCPLLENLRITQSPDL 202 (430)
Q Consensus 179 ~~l~~ll~~cp~Le~L~L~~~~~~ 202 (430)
+.++.+...+|.|++|.|.++..+
T Consensus 5 ~~l~~l~~n~~~L~~L~L~~~~~i 28 (167)
T d1pgva_ 5 SCINRLREDDTDLKEVNINNMKRV 28 (167)
T ss_dssp HHHHHHHTTCSSCCEEECTTCCSS
T ss_pred HHHHHHHhCCCCCcEEEeCCCCCC
Confidence 346666677777777777765443
No 34
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=94.83 E-value=0.0063 Score=48.67 Aligned_cols=122 Identities=13% Similarity=0.129 Sum_probs=67.6
Q ss_pred HhhccCCCceEEEEecceeeecccc------cCCCCccceEEEEEeecCccchhhHHHHHhhCCCceEEEEEEecccccc
Q 014141 274 SIVSYLPQLKTLELDGCNEVFAQFS------QREFPKLMNLNISFTAANQETLLGLSFIMKACPFLEKLVLQIWNNGRRI 347 (430)
Q Consensus 274 ~l~~~~~~l~~L~l~~~~~~~~~~l------~~~~~~L~~L~l~~~~~~~~~~~~l~~lL~~~p~L~~L~l~~~~~~~~~ 347 (430)
++..+.++|+.|.|.....+....+ ....++|++|+|+.+.-.......+...|+.++.|++|.|.... .
T Consensus 9 ~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~----i 84 (167)
T d1pgva_ 9 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNF----L 84 (167)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSB----C
T ss_pred HHHhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhh----c
Confidence 4445556666666654221221111 11145566666644322223345577888889999999885532 1
Q ss_pred ccCcccc--c-cCcCCCccEEEEeeee----cChhhHHHHHHHHhcccccccEEEecCCC
Q 014141 348 GKKRHQI--S-KHSHQHLKLVELQGFN----GREIDFELAFYVFENATMLEKMIIKPSGS 400 (430)
Q Consensus 348 ~~~~~~~--~-~~~~~~L~~v~i~~~~----g~~~e~~l~~~ll~~a~~Le~m~i~~~~~ 400 (430)
.+.|... . -....+|+.+.+.+-. |.+....++..+-.| +.|+++.+.+...
T Consensus 85 ~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n-~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 85 TPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEEN-ESLLRVGISFASM 143 (167)
T ss_dssp CHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHC-SSCCEEECCCCCH
T ss_pred chHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhC-CCccEeeCcCCCc
Confidence 2222111 1 2235679999887642 344556677765555 8899998876543
No 35
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.72 E-value=0.0073 Score=48.11 Aligned_cols=21 Identities=10% Similarity=0.121 Sum_probs=15.7
Q ss_pred hhhHHHHHhhCCCceEEEEEE
Q 014141 320 LLGLSFIMKACPFLEKLVLQI 340 (430)
Q Consensus 320 ~~~l~~lL~~~p~L~~L~l~~ 340 (430)
...+...++.+++|++|.+++
T Consensus 121 ~~~La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 121 EMEIANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp HHHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHHHHHhCCCcCEEeCcC
Confidence 345777888888888888754
No 36
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.26 E-value=0.015 Score=43.69 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=17.5
Q ss_pred ceEEEeeEEEcchhHHHHhhcCCcccceeeccCC
Q 014141 167 RSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSP 200 (430)
Q Consensus 167 ~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~ 200 (430)
+.|+|++..+++ +.. +..++.|++|.+.+..
T Consensus 1 R~L~Ls~n~l~~--l~~-l~~l~~L~~L~ls~N~ 31 (124)
T d1dcea3 1 RVLHLAHKDLTV--LCH-LEQLLLVTHLDLSHNR 31 (124)
T ss_dssp SEEECTTSCCSS--CCC-GGGGTTCCEEECCSSC
T ss_pred CEEEcCCCCCCC--Ccc-cccCCCCCEEECCCCc
Confidence 345555555542 111 4566777777777653
No 37
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.09 E-value=0.01 Score=52.26 Aligned_cols=15 Identities=13% Similarity=0.098 Sum_probs=8.1
Q ss_pred ccCCCceEEEEecce
Q 014141 277 SYLPQLKTLELDGCN 291 (430)
Q Consensus 277 ~~~~~l~~L~l~~~~ 291 (430)
..+++|+.|.+..+.
T Consensus 239 ~~l~~L~~L~Ls~N~ 253 (305)
T d1xkua_ 239 ADHKYIQVVYLHNNN 253 (305)
T ss_dssp TTCSSCCEEECCSSC
T ss_pred ccccCCCEEECCCCc
Confidence 445556666655543
No 38
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.09 E-value=0.01 Score=47.21 Aligned_cols=122 Identities=17% Similarity=0.156 Sum_probs=70.6
Q ss_pred HhhccCCCceEEEEecceeeecccc------cCCCCccceEEEEEeecCccchhhHHHHHhhCCCceEEEEEEecccccc
Q 014141 274 SIVSYLPQLKTLELDGCNEVFAQFS------QREFPKLMNLNISFTAANQETLLGLSFIMKACPFLEKLVLQIWNNGRRI 347 (430)
Q Consensus 274 ~l~~~~~~l~~L~l~~~~~~~~~~l------~~~~~~L~~L~l~~~~~~~~~~~~l~~lL~~~p~L~~L~l~~~~~~~~~ 347 (430)
.+..+.+.|+.|.+.....+....+ ....++|++|+++...-+......+...++..+.++.|++.... .
T Consensus 11 ~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~----~ 86 (166)
T d1io0a_ 11 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF----I 86 (166)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC----C
T ss_pred HHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccc----c
Confidence 4455666777777654321222111 11256677777755433334455678889999999999885421 1
Q ss_pred ccCccc---cccCcCCCccEEEEeeee---cChhhHHHHHHHHhcccccccEEEecCCC
Q 014141 348 GKKRHQ---ISKHSHQHLKLVELQGFN---GREIDFELAFYVFENATMLEKMIIKPSGS 400 (430)
Q Consensus 348 ~~~~~~---~~~~~~~~L~~v~i~~~~---g~~~e~~l~~~ll~~a~~Le~m~i~~~~~ 400 (430)
.+.+.. ..-...++|+.+.+.... |.+....++..+ +..+.|+++.+.+...
T Consensus 87 ~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L-~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 87 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANML-EKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHH-HHCSSCCEEECCCSSH
T ss_pred cchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHH-HhCCCcCEEeCcCCCC
Confidence 122211 112346788988886432 334445666654 5678999999876543
No 39
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.20 E-value=0.017 Score=53.48 Aligned_cols=55 Identities=18% Similarity=0.308 Sum_probs=28.2
Q ss_pred CceEEEEEeecCcchhhHHHHhhccCCCceEEEEecceeeeccc---c---cCCCCccceEEEE
Q 014141 254 QLVDVVFHVTPMVQKMHCIGSIVSYLPQLKTLELDGCNEVFAQF---S---QREFPKLMNLNIS 311 (430)
Q Consensus 254 ~L~~~~i~~~~~~~~~~~~~~l~~~~~~l~~L~l~~~~~~~~~~---l---~~~~~~L~~L~l~ 311 (430)
.|+++.++...... ..+.+++..+++++.|.|..+. +.... + ....++|++|+|+
T Consensus 3 ~l~~ld~~~~~i~~--~~~~~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs 63 (460)
T d1z7xw1 3 DIQSLDIQCEELSD--ARWAELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLR 63 (460)
T ss_dssp EEEEEEEESCCCCH--HHHHHHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECT
T ss_pred CCCEEEeeCCcCCh--HHHHHHHHhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECc
Confidence 45666665433321 2233556666777777776665 33211 1 1225666666663
No 40
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=89.58 E-value=0.27 Score=43.00 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=32.3
Q ss_pred hccCCCceEEEEecceeeecccccCCCCccceEEEEEeecCccchhhHHHHHhhCCCceEEEEEE
Q 014141 276 VSYLPQLKTLELDGCNEVFAQFSQREFPKLMNLNISFTAANQETLLGLSFIMKACPFLEKLVLQI 340 (430)
Q Consensus 276 ~~~~~~l~~L~l~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~l~~lL~~~p~L~~L~l~~ 340 (430)
...+++|+.|++..+. +. .+|..+++|++|+++... ...+. +..++|++|+++.
T Consensus 280 ~~~~~~L~~L~Ls~N~-l~--~lp~~~~~L~~L~L~~N~-----L~~l~---~~~~~L~~L~L~~ 333 (353)
T d1jl5a_ 280 CDLPPSLEELNVSNNK-LI--ELPALPPRLERLIASFNH-----LAEVP---ELPQNLKQLHVEY 333 (353)
T ss_dssp CCCCTTCCEEECCSSC-CS--CCCCCCTTCCEEECCSSC-----CSCCC---CCCTTCCEEECCS
T ss_pred cccCCCCCEEECCCCc-cC--ccccccCCCCEEECCCCc-----CCccc---cccCCCCEEECcC
Confidence 3456778888887765 32 345557888888774321 11111 2345788887744
No 41
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.55 E-value=0.059 Score=42.09 Aligned_cols=67 Identities=21% Similarity=0.094 Sum_probs=37.9
Q ss_pred CCCCCCCCCCCCceEEEeeE-EEcchhHHHHhhcCCcccceeeccCCCCceeeEe--cCCCCcceEEEeecC
Q 014141 155 QSGCGLSGIKSLRSLTLCAV-NVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVV--GSSIPLKCLDIQFCY 223 (430)
Q Consensus 155 ~~p~~~~~~~~L~~L~L~~~-~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~--~~~~~L~~L~l~~c~ 223 (430)
..|..+.++++|+.|++.+. .++.-. ...+.+.++|+.|.|.++. ++.+... ..+++|+.|.+++..
T Consensus 22 ~~p~~l~~l~~l~~L~l~~n~~l~~i~-~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 22 DSLHHLPGAENLTELYIENQQHLQHLE-LRDLRGLGELRNLTIVKSG-LRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp TTTTTSCSCSCCSEEECCSCSSCCEEC-GGGSCSCCCCSEEECCSSC-CCEECTTGGGSCSCCCEEECCSSC
T ss_pred cCcccccCccccCeeecCCCccccccC-chhhccccccCcceeeccc-cCCcccccccccccccceeccCCC
Confidence 44555567788888888644 232100 1125578888888888774 3333221 234566666665543
No 42
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=88.67 E-value=0.08 Score=42.75 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=46.0
Q ss_pred CCCCCCCCceEEEeeEEEcchhHHHHhhcCCcccceeeccCCCCceeeEe--cCCCCcceEEEeecCCccEE
Q 014141 159 GLSGIKSLRSLTLCAVNVTGEVVEFFIHNCPLLENLRITQSPDLLSLKVV--GSSIPLKCLDIQFCYSIKEI 228 (430)
Q Consensus 159 ~~~~~~~L~~L~L~~~~~~~~~l~~ll~~cp~Le~L~L~~~~~~~~~~i~--~~~~~L~~L~l~~c~~l~~i 228 (430)
.+.++++|++|+|.+..+..- ....+.+.+.|+.|.|.+.. ++.+.-. ..+++|+.|.+.+.. +..+
T Consensus 49 ~f~~l~~L~~L~L~~N~i~~~-~~~~~~~~~~L~~L~Ls~N~-l~~l~~~~F~~l~~L~~L~L~~N~-l~~i 117 (192)
T d1w8aa_ 49 LFGRLPHLVKLELKRNQLTGI-EPNAFEGASHIQELQLGENK-IKEISNKMFLGLHQLKTLNLYDNQ-ISCV 117 (192)
T ss_dssp SGGGCTTCCEEECCSSCCCCB-CTTTTTTCTTCCEEECCSCC-CCEECSSSSTTCTTCCEEECCSSC-CCEE
T ss_pred ccCCCceEeeeeccccccccc-cccccccccccceeeecccc-ccccCHHHHhCCCcccccccCCcc-cccc
Confidence 446789999999998866532 12345678999999999884 3333222 346889999988765 4444
No 43
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=84.39 E-value=0.25 Score=43.27 Aligned_cols=53 Identities=13% Similarity=0.061 Sum_probs=32.9
Q ss_pred CCCcceEEEeecCCccEEEEeCCceeEEEEecceeeeecCCCCCceEEEEEeec
Q 014141 211 SIPLKCLDIQFCYSIKEIEISAPNLLSFKYIGQDINLHVGSLPQLVDVVFHVTP 264 (430)
Q Consensus 211 ~~~L~~L~l~~c~~l~~i~i~~P~L~~L~~~~~~~~~~~~~~~~L~~~~i~~~~ 264 (430)
+++|+.|.+.+|. +..+.-..|+|+.|++.+..+.-.-...++|+.++++.++
T Consensus 283 ~~~L~~L~Ls~N~-l~~lp~~~~~L~~L~L~~N~L~~l~~~~~~L~~L~L~~N~ 335 (353)
T d1jl5a_ 283 PPSLEELNVSNNK-LIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNP 335 (353)
T ss_dssp CTTCCEEECCSSC-CSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred CCCCCEEECCCCc-cCccccccCCCCEEECCCCcCCccccccCCCCEEECcCCc
Confidence 4678888887775 5554444578888887766543211234567877776543
No 44
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.39 E-value=0.59 Score=35.97 Aligned_cols=58 Identities=17% Similarity=0.122 Sum_probs=32.3
Q ss_pred hhcCCcccceeeccCCCCceeeEe--cCCCCcceEEEeecCCccEEEE----eCCceeEEEEecc
Q 014141 185 IHNCPLLENLRITQSPDLLSLKVV--GSSIPLKCLDIQFCYSIKEIEI----SAPNLLSFKYIGQ 243 (430)
Q Consensus 185 l~~cp~Le~L~L~~~~~~~~~~i~--~~~~~L~~L~l~~c~~l~~i~i----~~P~L~~L~~~~~ 243 (430)
+.+.++|++|.|.+...++.+... ..+++|+.|.+.+.. +..+.- ..++|++|++.+.
T Consensus 27 l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG-LRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSC-CCEECTTGGGSCSCCCEEECCSS
T ss_pred ccCccccCeeecCCCccccccCchhhccccccCcceeeccc-cCCcccccccccccccceeccCC
Confidence 445677888888766555554332 234667777776654 444421 2345555555444
No 45
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.11 E-value=0.46 Score=36.86 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=16.7
Q ss_pred CCCCceEEEeeEEEcc-hhHHHHhhcCCcccceeeccC
Q 014141 163 IKSLRSLTLCAVNVTG-EVVEFFIHNCPLLENLRITQS 199 (430)
Q Consensus 163 ~~~L~~L~L~~~~~~~-~~l~~ll~~cp~Le~L~L~~~ 199 (430)
+++|++|+|++..+++ ..+...+..||+|+.|.|.+.
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N 101 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN 101 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccC
Confidence 3445555555544433 223333444555555555443
No 46
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.47 E-value=0.34 Score=37.66 Aligned_cols=61 Identities=25% Similarity=0.195 Sum_probs=31.5
Q ss_pred hccCCCceEEEEecceeeeccc-c-cCCCCccceEEEEEeecCc---cchhhHHHHHhhCCCceEEE
Q 014141 276 VSYLPQLKTLELDGCNEVFAQF-S-QREFPKLMNLNISFTAANQ---ETLLGLSFIMKACPFLEKLV 337 (430)
Q Consensus 276 ~~~~~~l~~L~l~~~~~~~~~~-l-~~~~~~L~~L~l~~~~~~~---~~~~~l~~lL~~~p~L~~L~ 337 (430)
+..+++|+.|.++++. +.... + .-...+|++|.+....-.. ........+++.+|+|+.|+
T Consensus 87 ~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 87 VQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred HhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 4566777777776665 32211 0 1114456666663321111 12233556778888888774
Done!