BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014142
(430 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus
GN=Hgsnat PE=1 SV=2
Length = 656
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 185/395 (46%), Gaps = 73/395 (18%)
Query: 16 LVEQEQDDGKDSENGINKEKGLERSEVQDEQKGELQLQQLLQQKSKRVATLDAFRGLTVV 75
+ +E D +SE G ++ Q E + + + R+ +D FRGL +V
Sbjct: 223 IASRETDRLINSELGSPSRADPLSADYQPETR---------RSSANRLRCVDTFRGLALV 273
Query: 76 LMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK---- 131
LM+ V+ GG Y HS WNG T+AD V P+F+FI+G +I L++ + + G K
Sbjct: 274 LMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQ-RGCSKLKLL 332
Query: 132 -KIIFRTLKLLFWG-IILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETL 189
KI++R+ L+ G II+ Y P + +R G+LQR+ + Y VVA++E
Sbjct: 333 GKIVWRSFLLICIGVIIVNPNYCLGP------LSWDKVRIPGVLQRLGVTYFVVAVLEFF 386
Query: 190 TTKRRPN--VLEPRHLSI--FTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGV 245
K P+ LE S+ T+ QW+ I++ T+ L VP G
Sbjct: 387 FWKPVPDSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVP----------GC 436
Query: 246 KKYIVKCGMRGHLG--PACN--AVGYVDRELWGINHLYSDPVWSRLEACTLSSPNSGPLR 301
+ G G LG P C A GY+DR L G NHLY P + L ++
Sbjct: 437 PTGYLGPGGIGDLGKYPHCTGGAAGYIDRLLLGDNHLYQHPSSTVLYHTEVA-------- 488
Query: 302 EDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHS----ARLKHWVSMGFGL 357
++PEG+L TI++I+ +G+ G +L+++K + R W + L
Sbjct: 489 ----------YDPEGVLGTINSIVMAFLGVQAGKILVYYKDQTKAILTRFAAWCCI---L 535
Query: 358 LIIAIILHFTNA----IPINKQLYSFSYV----CF 384
+I+I+L +A IPINK L+S SYV CF
Sbjct: 536 GLISIVLTKVSANEGFIPINKNLWSISYVTTLSCF 570
>sp|Q68CP4|HGNAT_HUMAN Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens
GN=HGSNAT PE=1 SV=2
Length = 663
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 180/379 (47%), Gaps = 59/379 (15%)
Query: 25 KDSENGINKEKGLERSEVQDEQKGELQLQQ-LLQQKSKRVATLDAFRGLTVVLMILVDDA 83
++++ IN E G D G++Q L R+ ++D FRG+ ++LM+ V+
Sbjct: 231 RETDRLINSELG--SPSRTDPLDGDVQPATWRLSALPPRLRSVDTFRGIALILMVFVNYG 288
Query: 84 GGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK-----KIIFRTL 138
GG Y H+ WNG T+AD V P+F+FI+G +I L++ + + G K KI +R+
Sbjct: 289 GGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQ-RGCSKFRLLGKIAWRSF 347
Query: 139 KLLFWGIIL-QGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPN- 196
L+ GII+ Y P + +R G+LQR+ + Y VVA++E L K P
Sbjct: 348 LLICIGIIIVNPNYCLGP------LSWDKVRIPGVLQRLGVTYFVVAVLELLFAKPVPEH 401
Query: 197 -VLEPRHLSI--FTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCG 253
E LS+ T+ QW+ + +++ T+ L VP G + G
Sbjct: 402 CASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVP----------GCPTGYLGPG 451
Query: 254 MRGHLG--PACN--AVGYVDRELWGINHLYSDPVWSRLEACTLSSPNSGPLREDAPSWCR 309
G G P C A GY+DR L G +HLY P + L ++
Sbjct: 452 GIGDFGKYPNCTGGAAGYIDRLLLGDDHLYQHPSSAVLYHTEVA---------------- 495
Query: 310 APFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSA----RLKHWVSMGFGLLIIAIILH 365
++PEG+L TI++I+ +G+ G +L+++K + R W + GL+ +A+
Sbjct: 496 --YDPEGILGTINSIVMAFLGVQAGKILLYYKARTKDILIRFTAWCCI-LGLISVALTKV 552
Query: 366 FTNA--IPINKQLYSFSYV 382
N IP+NK L+S SYV
Sbjct: 553 SENEGFIPVNKNLWSLSYV 571
>sp|Q2LCP7|NU4M_DICCI NADH-ubiquinone oxidoreductase chain 4 OS=Dictyostelium citrinum
GN=nad4 PE=3 SV=1
Length = 414
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 14 TQLVEQEQDDGKDSE-NGIN-KEKGLERSEVQDEQKGELQLQQLLQQKSKRVATLDAFR- 70
+++ +E ++G E N + KE G+ + + E GEL+ Q ++++S + + ++ F
Sbjct: 321 NEIITREANEGIQMEVNKMTIKEGGINKKVTEGEIIGELEYPQYIKKESMKYSDVNIFEF 380
Query: 71 ---GLTVVLMILV 80
GL V+LM++V
Sbjct: 381 VSIGLMVILMLIV 393
>sp|C5BR49|PDXB_TERTT Erythronate-4-phosphate dehydrogenase OS=Teredinibacter turnerae
(strain ATCC 39867 / T7901) GN=pdxB PE=3 SV=1
Length = 370
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 241 SDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHL 278
+DH K+++ + G+R P CNA G V +L + HL
Sbjct: 69 TDHLDKEFLAEAGIRFASAPGCNAQGVVQYDLAALAHL 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,890,339
Number of Sequences: 539616
Number of extensions: 7001801
Number of successful extensions: 24316
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 24289
Number of HSP's gapped (non-prelim): 26
length of query: 430
length of database: 191,569,459
effective HSP length: 120
effective length of query: 310
effective length of database: 126,815,539
effective search space: 39312817090
effective search space used: 39312817090
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)