Query 014143
Match_columns 430
No_of_seqs 216 out of 1092
Neff 8.6
Searched_HMMs 13730
Date Mon Mar 25 06:14:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014143.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014143hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ufma_ a.4.5.47 (A:) COP9 sig 99.7 1.6E-17 1.2E-21 125.4 6.3 69 336-404 11-79 (84)
2 d1qqea_ a.118.8.1 (A:) Vesicul 99.0 1.2E-07 9.1E-12 87.4 28.9 236 53-330 36-273 (290)
3 d1qqea_ a.118.8.1 (A:) Vesicul 98.8 4.7E-07 3.4E-11 83.3 23.5 176 30-212 51-229 (290)
4 d1fcha_ a.118.8.1 (A:) Peroxin 98.6 3E-06 2.2E-10 78.1 23.2 201 28-251 31-269 (323)
5 d1hz4a_ a.118.8.2 (A:) Transcr 98.6 1.4E-05 1E-09 73.0 26.5 216 27-251 23-242 (366)
6 d1hz4a_ a.118.8.2 (A:) Transcr 98.2 0.0001 7.3E-09 67.0 22.5 212 30-252 105-321 (366)
7 d1w3ba_ a.118.8.1 (A:) O-GlcNA 98.2 9.1E-05 6.6E-09 68.3 20.7 186 29-250 182-367 (388)
8 d1w3ba_ a.118.8.1 (A:) O-GlcNA 98.1 0.00023 1.6E-08 65.5 21.5 95 138-250 171-265 (388)
9 d1fcha_ a.118.8.1 (A:) Peroxin 97.9 0.00057 4.2E-08 62.0 20.3 170 29-215 66-273 (323)
10 d1p5qa1 a.118.8.1 (A:258-427) 97.7 0.0045 3.3E-07 51.1 20.4 114 54-212 13-126 (170)
11 d1kt1a1 a.118.8.1 (A:254-421) 97.6 0.0052 3.8E-07 50.5 19.9 132 53-231 14-145 (168)
12 d1xnfa_ a.118.8.1 (A:) Lipopro 97.6 0.0026 1.9E-07 55.4 18.6 121 32-166 15-135 (259)
13 d1elra_ a.118.8.1 (A:) Hop {Hu 97.6 0.00095 6.9E-08 52.6 14.0 100 140-251 8-108 (128)
14 d1xnfa_ a.118.8.1 (A:) Lipopro 97.5 0.0038 2.8E-07 54.3 19.4 61 139-211 74-134 (259)
15 d1a17a_ a.118.8.1 (A:) Protein 97.3 0.0023 1.7E-07 52.1 14.2 29 54-82 10-38 (159)
16 d1hh8a_ a.118.8.1 (A:) Neutrop 97.2 0.0051 3.7E-07 51.9 15.6 129 28-211 17-149 (192)
17 d1elwa_ a.118.8.1 (A:) Hop {Hu 97.2 0.0013 9.4E-08 50.9 10.4 87 28-166 15-101 (117)
18 d1elra_ a.118.8.1 (A:) Hop {Hu 97.1 0.0028 2E-07 49.7 11.7 92 29-165 17-108 (128)
19 d1hxia_ a.118.8.1 (A:) Peroxin 97.1 0.0015 1.1E-07 50.1 9.5 83 28-162 28-110 (112)
20 d2c2la1 a.118.8.1 (A:24-224) S 97.1 0.0038 2.8E-07 52.1 12.9 101 54-214 4-104 (201)
21 d1elwa_ a.118.8.1 (A:) Hop {Hu 97.0 0.0041 3E-07 47.9 11.8 94 141-252 8-101 (117)
22 d2c2la1 a.118.8.1 (A:24-224) S 97.0 0.0029 2.1E-07 52.8 11.8 94 141-252 9-102 (201)
23 d1hxia_ a.118.8.1 (A:) Peroxin 97.0 0.0046 3.3E-07 47.2 11.9 92 139-248 19-110 (112)
24 d2fbna1 a.118.8.1 (A:22-174) P 97.0 0.015 1.1E-06 46.8 15.5 115 54-212 17-131 (153)
25 d1p5qa1 a.118.8.1 (A:258-427) 97.0 0.0085 6.2E-07 49.3 14.1 107 139-251 16-125 (170)
26 d1a17a_ a.118.8.1 (A:) Protein 96.9 0.0048 3.5E-07 50.1 12.0 94 140-251 14-107 (159)
27 d2hr2a1 a.118.8.8 (A:2-157) Hy 96.8 0.011 7.7E-07 47.8 13.2 115 141-255 14-133 (156)
28 d2h6fa1 a.118.6.1 (A:55-369) P 96.8 0.011 7.8E-07 53.9 14.2 100 139-251 115-215 (315)
29 d2fbna1 a.118.8.1 (A:22-174) P 96.8 0.016 1.1E-06 46.7 13.8 105 141-251 22-130 (153)
30 d2hr2a1 a.118.8.8 (A:2-157) Hy 96.7 0.007 5.1E-07 49.0 11.3 105 28-169 21-133 (156)
31 d1ihga1 a.118.8.1 (A:197-365) 96.7 0.03 2.2E-06 45.6 15.4 115 54-212 27-141 (169)
32 d1kt1a1 a.118.8.1 (A:254-421) 96.6 0.018 1.3E-06 47.0 13.1 106 139-250 18-126 (168)
33 d1wi9a_ a.4.5.47 (A:) Hypothet 96.5 0.0033 2.4E-07 43.2 6.2 59 345-403 11-69 (72)
34 d1hh8a_ a.118.8.1 (A:) Neutrop 96.1 0.051 3.7E-06 45.3 13.8 100 140-251 40-149 (192)
35 d1dcea1 a.118.6.1 (A:1-241,A:3 96.1 0.13 9.3E-06 46.2 17.6 122 32-165 45-173 (334)
36 d1tjca_ a.118.8.1 (A:) Prolyl 96.1 0.0034 2.5E-07 46.5 5.1 70 15-84 3-76 (95)
37 d1tjca_ a.118.8.1 (A:) Prolyl 96.0 0.019 1.4E-06 42.2 9.0 69 139-212 8-76 (95)
38 d1zbpa1 e.61.1.1 (A:2-265) Hyp 95.7 0.081 5.9E-06 46.7 13.5 121 26-169 6-132 (264)
39 d1ya0a1 a.118.8.1 (A:1-497) SM 95.6 0.0081 5.9E-07 58.5 6.8 92 139-250 123-214 (497)
40 d1ihga1 a.118.8.1 (A:197-365) 95.4 0.052 3.8E-06 44.0 10.3 105 141-251 32-140 (169)
41 d2ff4a2 a.118.8.3 (A:105-283) 95.2 0.18 1.3E-05 41.4 13.4 122 52-211 9-130 (179)
42 d1nzna_ a.118.8.1 (A:) Mitocho 94.8 0.042 3E-06 42.4 7.7 54 31-87 51-104 (122)
43 d1nzna_ a.118.8.1 (A:) Mitocho 94.8 0.19 1.4E-05 38.4 11.5 94 141-250 4-100 (122)
44 d1dcea1 a.118.6.1 (A:1-241,A:3 94.7 0.03 2.2E-06 50.6 7.7 55 27-84 120-174 (334)
45 d2onda1 a.118.8.7 (A:242-549) 93.9 1.8 0.00013 37.7 19.5 191 32-252 80-271 (308)
46 d2pqrb1 a.118.8.1 (B:5-128) Mi 93.5 0.09 6.6E-06 40.6 6.9 52 30-84 52-103 (124)
47 d2h6fa1 a.118.6.1 (A:55-369) P 93.2 0.48 3.5E-05 42.2 12.8 132 53-250 42-174 (315)
48 d2cfxa1 a.4.5.32 (A:1-63) Tran 93.0 0.085 6.2E-06 35.5 5.4 46 346-391 10-58 (63)
49 d1ub9a_ a.4.5.28 (A:) Hypothet 92.8 0.29 2.1E-05 35.9 8.7 77 347-425 22-98 (100)
50 d2cg4a1 a.4.5.32 (A:4-66) Regu 92.0 0.11 8.2E-06 34.9 4.9 42 346-387 10-51 (63)
51 d2onda1 a.118.8.7 (A:242-549) 91.6 3.8 0.00028 35.5 19.4 160 29-212 112-271 (308)
52 d2cyya1 a.4.5.32 (A:5-64) Puta 91.0 0.13 9.4E-06 34.1 4.3 42 346-387 8-49 (60)
53 d1i1ga1 a.4.5.32 (A:2-61) LprA 90.9 0.13 9.5E-06 34.2 4.2 41 346-386 8-48 (60)
54 d1sfxa_ a.4.5.50 (A:) Hypothet 90.5 1.2 8.7E-05 32.9 10.1 57 353-409 32-88 (109)
55 d1ya0a1 a.118.8.1 (A:1-497) SM 88.3 3.6 0.00026 38.7 14.4 152 31-211 64-215 (497)
56 d1z05a1 a.4.5.63 (A:10-80) Tra 86.8 0.57 4.1E-05 31.9 5.4 41 346-386 11-51 (71)
57 d1dpua_ a.4.5.16 (A:) C-termin 85.1 0.37 2.7E-05 32.8 3.5 39 354-392 22-61 (69)
58 d1z6ra1 a.4.5.63 (A:12-81) Mlc 84.9 0.87 6.3E-05 30.9 5.5 42 345-386 9-50 (70)
59 d2ff4a2 a.118.8.3 (A:105-283) 84.2 8.5 0.00062 30.6 13.1 110 137-252 12-131 (179)
60 d2fbha1 a.4.5.28 (A:8-144) Tra 83.1 3.5 0.00026 31.2 9.4 48 354-401 42-92 (137)
61 d3ctaa1 a.4.5.28 (A:5-89) Ta10 79.9 1.6 0.00011 30.7 5.5 63 354-421 20-82 (85)
62 d1zu2a1 a.118.8.1 (A:1-145) Mi 78.1 12 0.00086 28.3 12.1 39 32-74 13-51 (145)
63 d2d1ha1 a.4.5.50 (A:1-109) Hyp 77.8 5.4 0.00039 28.9 8.3 53 349-401 30-85 (109)
64 d1lvaa3 a.4.5.35 (A:511-574) C 77.1 2.4 0.00018 28.0 5.4 34 353-386 21-54 (64)
65 d2etha1 a.4.5.28 (A:1-140) Put 76.7 6.4 0.00046 29.8 8.9 47 354-400 45-94 (140)
66 d1zu2a1 a.118.8.1 (A:1-145) Mi 76.6 1.7 0.00012 33.6 5.3 35 31-69 56-90 (145)
67 d3bwga1 a.4.5.6 (A:5-82) Trans 76.3 5 0.00036 27.3 7.2 61 337-399 3-64 (78)
68 d1rz4a1 a.4.5.53 (A:132-216) E 75.7 2 0.00014 30.2 4.8 42 337-378 3-45 (85)
69 d2fbia1 a.4.5.28 (A:5-140) Pro 73.2 8.5 0.00062 28.9 8.8 47 350-396 39-85 (136)
70 d2ev0a1 a.4.5.24 (A:2-62) Mang 71.4 3 0.00022 27.2 4.6 35 352-386 18-52 (61)
71 d1zbpa1 e.61.1.1 (A:2-265) Hyp 70.4 21 0.0015 30.1 11.6 56 144-211 4-59 (264)
72 d1jhfa1 a.4.5.2 (A:2-72) LexA 68.5 6 0.00044 26.5 5.9 35 354-388 23-58 (71)
73 d1s3ja_ a.4.5.28 (A:) Putative 68.4 10 0.00073 28.7 8.2 49 352-400 46-97 (143)
74 d2hs5a1 a.4.5.6 (A:25-93) Puta 68.3 7.8 0.00057 25.6 6.5 61 335-397 5-65 (69)
75 d2isya1 a.4.5.24 (A:2-64) Iron 68.2 4.5 0.00033 26.5 5.0 38 349-386 17-54 (63)
76 d1lj9a_ a.4.5.28 (A:) Transcri 67.6 12 0.00085 28.4 8.4 47 354-400 42-91 (144)
77 d1lnwa_ a.4.5.28 (A:) MexR rep 66.7 16 0.0012 27.4 9.2 44 351-394 46-89 (141)
78 d1ylfa1 a.4.5.55 (A:5-142) Hyp 66.1 9.2 0.00067 28.9 7.5 52 344-396 11-63 (138)
79 d1ouva_ a.118.18.1 (A:) Cystei 65.8 32 0.0023 28.0 12.0 90 139-250 5-102 (265)
80 d3deua1 a.4.5.28 (A:2-141) Tra 65.7 15 0.0011 27.4 8.8 48 354-401 45-95 (140)
81 d2bgca1 a.4.5.4 (A:138-237) Li 65.2 3.9 0.00028 29.6 4.6 57 355-415 31-88 (100)
82 d1ku9a_ a.4.5.36 (A:) DNA-bind 65.2 7.5 0.00055 29.6 6.9 45 354-398 40-84 (151)
83 d1p4xa2 a.4.5.28 (A:126-250) S 64.4 11 0.00081 28.0 7.5 45 352-396 46-90 (125)
84 d1hw1a1 a.4.5.6 (A:5-78) Fatty 63.2 8 0.00058 26.0 5.7 50 339-388 10-60 (74)
85 d2pqrb1 a.118.8.1 (B:5-128) Mi 62.9 26 0.0019 26.0 10.8 66 136-212 35-103 (124)
86 d1l0oc_ a.4.13.2 (C:) SigmaF { 62.7 8 0.00058 24.6 5.3 44 332-376 8-52 (57)
87 d2bv6a1 a.4.5.28 (A:5-140) Tra 60.4 6.7 0.00049 29.5 5.6 50 352-401 45-97 (136)
88 d2a61a1 a.4.5.28 (A:5-143) Tra 59.9 24 0.0018 26.2 9.0 49 353-401 42-93 (139)
89 d1xd7a_ a.4.5.55 (A:) Hypothet 59.3 18 0.0013 26.7 7.9 42 354-395 17-58 (127)
90 d1jgsa_ a.4.5.28 (A:) Multiple 56.3 30 0.0022 25.6 8.9 48 353-400 46-96 (138)
91 d1zyba1 a.4.5.4 (A:148-220) Pr 55.4 8.3 0.0006 25.8 4.6 44 355-402 27-70 (73)
92 d2frha1 a.4.5.28 (A:102-216) P 54.3 5 0.00037 29.5 3.6 44 352-395 46-89 (115)
93 d3broa1 a.4.5.28 (A:3-137) Tra 53.1 16 0.0012 27.0 6.7 49 352-400 42-93 (135)
94 d1r7ja_ a.4.5.49 (A:) Sso10a ( 52.1 22 0.0016 24.7 6.7 69 355-427 18-87 (90)
95 d2hr3a1 a.4.5.28 (A:2-146) Pro 49.6 36 0.0026 25.3 8.4 48 354-401 48-98 (145)
96 d1biaa1 a.4.5.1 (A:1-63) Bioti 49.1 15 0.0011 23.6 5.0 39 346-384 10-48 (63)
97 d1mkma1 a.4.5.33 (A:1-75) Tran 48.9 13 0.00096 24.8 4.9 42 354-398 19-60 (75)
98 d2fxaa1 a.4.5.28 (A:6-167) Pro 48.3 11 0.00078 29.5 5.0 54 346-399 46-102 (162)
99 d2hoea1 a.4.5.63 (A:10-71) N-a 48.2 12 0.00088 24.1 4.4 32 355-386 12-43 (62)
100 d1j5ya1 a.4.5.1 (A:3-67) Putat 47.3 18 0.0013 23.3 5.3 43 342-384 8-51 (65)
101 d3e5ua1 a.4.5.4 (A:148-227) Ch 44.3 11 0.00079 25.5 3.9 43 355-401 30-72 (80)
102 d1i5za1 a.4.5.4 (A:138-206) Ca 41.9 12 0.00088 24.4 3.7 32 355-386 29-60 (69)
103 d1xn7a_ a.4.5.62 (A:) Hypothet 40.8 19 0.0014 24.0 4.4 50 347-396 8-57 (78)
104 d1bl0a1 a.4.1.8 (A:9-62) MarA 40.6 17 0.0013 22.2 4.2 36 344-379 6-43 (54)
105 d1jt6a1 a.4.1.9 (A:2-72) Multi 40.3 12 0.00091 24.4 3.6 35 338-372 3-38 (71)
106 d1v4ra1 a.4.5.6 (A:1-100) Tran 40.1 7.9 0.00057 27.7 2.6 64 336-401 13-77 (100)
107 d1or7a1 a.4.13.2 (A:120-187) S 38.2 12 0.00089 24.3 3.2 30 351-380 30-59 (68)
108 d1rp3a2 a.4.13.2 (A:164-234) S 38.1 12 0.00085 24.5 3.1 30 352-381 34-63 (71)
109 d1p4xa1 a.4.5.28 (A:1-125) Sta 37.4 34 0.0025 24.9 6.2 43 352-394 47-89 (125)
110 d2zcwa1 a.4.5.4 (A:118-199) Tr 37.2 15 0.0011 24.8 3.7 44 355-402 29-72 (82)
111 d1rp3a1 a.4.13.1 (A:87-163) Si 36.9 11 0.00083 25.2 2.9 26 353-378 24-49 (77)
112 d1z0xa1 a.4.1.9 (A:4-71) Trans 36.8 18 0.0013 23.4 3.9 34 339-372 5-40 (68)
113 d2htja1 a.4.5.73 (A:1-73) P fi 36.5 28 0.0021 22.4 4.5 56 345-400 4-60 (73)
114 d1z91a1 a.4.5.28 (A:8-144) Org 36.3 16 0.0012 27.2 4.1 48 353-400 45-95 (137)
115 d1s6la1 a.4.5.79 (A:21-80) Alk 36.2 8.9 0.00065 24.5 2.0 28 353-380 14-41 (60)
116 d2fbqa1 a.4.1.9 (A:2-80) Trans 36.1 18 0.0013 24.1 3.9 36 337-372 5-41 (79)
117 d1b89a_ a.118.1.3 (A:) Clathri 35.8 1.1E+02 0.0083 26.3 10.6 168 57-247 17-199 (336)
118 d2gaua1 a.4.5.4 (A:152-232) Tr 35.6 18 0.0013 24.3 3.8 44 355-402 29-72 (81)
119 d2p4wa1 a.4.5.64 (A:1-194) Tra 35.2 53 0.0039 25.8 7.5 38 354-391 27-64 (194)
120 d1hsja1 a.4.5.28 (A:373-487) S 34.9 43 0.0031 24.0 6.3 50 352-401 45-97 (115)
121 d1rkta1 a.4.1.9 (A:2-82) Hypot 34.7 29 0.0021 23.1 4.9 39 334-372 9-48 (81)
122 d2gxba1 a.4.5.19 (A:140-198) Z 34.6 49 0.0036 20.8 5.4 40 347-386 8-47 (59)
123 d1u5ta2 a.4.5.54 (A:165-232) V 34.2 32 0.0023 22.6 4.7 47 345-393 7-53 (68)
124 d1mlaa2 d.58.23.1 (A:128-197) 34.0 11 0.00077 25.1 2.3 43 361-403 5-48 (70)
125 d1ui5a1 a.4.1.9 (A:5-75) A-fac 33.8 22 0.0016 23.2 4.0 35 338-372 7-42 (71)
126 d1d5ya1 a.4.1.8 (A:3-56) Rob t 33.8 33 0.0024 20.8 4.7 27 353-379 17-43 (54)
127 d1tw3a1 a.4.5.29 (A:14-98) Car 33.7 42 0.003 22.7 5.7 48 338-386 18-65 (85)
128 d2crua1 a.5.6.1 (A:8-112) Prog 32.6 8.5 0.00062 27.9 1.6 51 341-391 31-81 (105)
129 d1klxa_ a.118.18.1 (A:) Cystei 32.0 73 0.0053 22.8 7.5 48 29-82 36-87 (133)
130 d1ldja3 e.40.1.1 (A:411-686) C 31.9 27 0.0019 29.6 5.3 41 346-386 200-240 (276)
131 d1ft9a1 a.4.5.4 (A:134-213) CO 31.9 20 0.0015 24.0 3.6 44 355-401 30-73 (80)
132 d2i10a1 a.4.1.9 (A:10-78) Puta 31.8 16 0.0012 23.7 3.0 33 340-372 4-37 (69)
133 d2f2ea1 a.4.5.69 (A:5-146) Hyp 31.8 42 0.0031 25.3 5.9 64 353-417 31-98 (142)
134 d2gfna1 a.4.1.9 (A:4-80) Proba 31.3 22 0.0016 23.5 3.7 35 338-372 8-43 (77)
135 d2p7vb1 a.4.13.2 (B:546-613) S 31.1 41 0.003 21.9 5.0 30 352-381 22-51 (68)
136 d2g7la1 a.4.1.9 (A:16-83) Puta 30.6 27 0.002 22.5 4.0 31 341-371 9-40 (68)
137 d2fbka1 a.4.5.28 (A:8-179) Tra 30.6 22 0.0016 27.7 4.2 43 354-396 78-120 (172)
138 d1ku3a_ a.4.13.2 (A:) Sigma70 30.6 44 0.0032 21.2 4.9 28 353-380 26-53 (61)
139 d1sgma1 a.4.1.9 (A:5-77) Putat 30.1 21 0.0016 23.3 3.4 35 338-372 4-39 (73)
140 d1sfua_ a.4.5.19 (A:) 34L {Yab 29.9 49 0.0036 21.7 5.0 41 347-387 16-56 (70)
141 d2crba1 a.7.16.1 (A:8-90) Nucl 29.4 42 0.003 22.8 4.7 27 60-86 14-40 (83)
142 d1pb6a1 a.4.1.9 (A:14-85) Hypo 29.0 38 0.0028 21.9 4.6 35 338-372 6-41 (72)
143 d1v7ba1 a.4.1.9 (A:1-74) Trans 28.9 29 0.0021 22.6 4.0 34 339-372 7-41 (74)
144 d1eija_ a.5.6.1 (A:) Hypotheti 28.9 13 0.00094 24.9 1.9 22 370-391 37-58 (72)
145 d2gena1 a.4.1.9 (A:6-75) Proba 28.8 28 0.002 22.4 3.8 33 340-372 4-37 (70)
146 d1r1ta_ a.4.5.5 (A:) SmtB repr 28.5 86 0.0062 21.6 8.5 36 354-389 35-70 (98)
147 d2np5a1 a.4.1.9 (A:9-77) Trans 28.4 30 0.0022 22.1 4.0 22 351-372 17-38 (69)
148 d1zk8a1 a.4.1.9 (A:6-77) Trans 28.3 27 0.002 22.6 3.7 33 339-371 6-39 (72)
149 d2g7sa1 a.4.1.9 (A:3-76) Putat 28.1 28 0.0021 22.7 3.8 35 338-372 6-41 (74)
150 d2iu5a1 a.4.1.9 (A:1-71) Trans 27.7 31 0.0023 22.3 3.9 20 351-370 22-41 (71)
151 d1t56a1 a.4.1.9 (A:22-94) Ethr 27.0 41 0.003 21.6 4.5 34 339-372 6-40 (73)
152 d2id3a1 a.4.1.9 (A:13-80) Puta 26.9 39 0.0028 21.6 4.3 36 337-372 7-43 (68)
153 d2hsga1 a.35.1.5 (A:2-58) Gluc 26.7 21 0.0015 22.5 2.7 23 355-377 1-23 (57)
154 d2hzta1 a.4.5.69 (A:4-98) Puta 26.5 93 0.0068 21.3 7.2 65 353-417 22-91 (95)
155 d1vi0a1 a.4.1.9 (A:6-77) Hypot 26.5 31 0.0022 22.3 3.7 33 340-372 5-38 (72)
156 d3c07a1 a.4.1.9 (A:15-89) Puta 26.2 34 0.0025 22.2 3.9 35 338-372 7-42 (75)
157 d2o7ta1 a.4.1.9 (A:1-78) Trans 26.0 34 0.0025 22.5 4.0 35 338-372 9-44 (78)
158 d2id6a1 a.4.1.9 (A:1-75) Trans 25.8 23 0.0016 23.3 2.9 34 339-372 6-40 (75)
159 d1utga_ a.101.1.1 (A:) Uterogl 25.4 84 0.0062 20.5 6.0 40 295-338 3-42 (70)
160 d1ldda_ a.4.5.34 (A:) Anaphase 24.9 38 0.0028 22.6 3.8 35 352-386 19-64 (74)
161 d2fd5a1 a.4.1.9 (A:1-76) Proba 24.9 42 0.0031 21.8 4.3 35 336-370 7-42 (76)
162 d2fswa1 a.4.5.69 (A:3-104) Hyp 24.7 97 0.0071 21.6 6.5 64 354-417 32-100 (102)
163 d1s7oa_ a.4.13.3 (A:) Hypothet 24.5 24 0.0017 25.4 2.9 31 351-381 28-58 (106)
164 d1efaa1 a.35.1.5 (A:2-60) Lac 24.3 23 0.0016 22.6 2.4 23 354-376 1-23 (59)
165 d2hyja1 a.4.1.9 (A:8-82) Putat 24.2 36 0.0027 22.2 3.8 35 338-372 7-42 (75)
166 d2cqxa1 a.4.1.1 (A:8-66) LAG1 23.8 43 0.0032 21.0 3.9 28 351-378 24-52 (59)
167 d1u2wa1 a.4.5.5 (A:12-119) Cad 23.7 1.1E+02 0.0083 21.4 9.7 37 354-390 44-80 (108)
168 d2vkva1 a.4.1.9 (A:6-67) Tetra 23.2 20 0.0015 22.6 2.1 33 340-372 3-36 (62)
169 d1ccda_ a.101.1.1 (A:) Clara c 23.2 88 0.0064 20.8 5.4 41 294-338 4-44 (77)
170 d2o8pa1 a.118.7.1 (A:8-227) 14 23.1 1.8E+02 0.013 23.4 20.2 60 195-254 136-198 (220)
171 d2d6ya1 a.4.1.9 (A:7-74) Putat 23.0 42 0.003 21.5 3.8 34 339-372 5-39 (68)
172 d1r1ua_ a.4.5.5 (A:) Metal-sen 23.0 78 0.0057 21.7 5.6 35 354-388 30-64 (94)
173 d1ulya_ a.4.5.58 (A:) Hypothet 22.7 1E+02 0.0074 23.8 7.1 35 354-388 31-65 (190)
174 d1uxda_ a.35.1.5 (A:) Fructose 22.6 23 0.0017 22.5 2.3 22 356-377 1-22 (59)
175 d1l8qa1 a.4.12.2 (A:290-399) C 22.5 43 0.0031 24.0 4.1 45 300-344 64-108 (110)
176 d1xsva_ a.4.13.3 (A:) Hypothet 22.2 32 0.0023 24.7 3.2 31 351-381 30-60 (106)
177 d1qzza1 a.4.5.29 (A:10-101) Ac 21.6 89 0.0065 21.3 5.6 48 339-387 25-72 (92)
178 d1z7ua1 a.4.5.69 (A:1-108) Hyp 21.3 1.2E+02 0.0084 21.4 6.4 65 354-418 31-100 (108)
179 d2fx0a1 a.4.1.9 (A:4-76) Hemol 20.6 59 0.0043 21.0 4.2 35 338-372 6-41 (73)
180 d1ouva_ a.118.18.1 (A:) Cystei 20.1 1.9E+02 0.014 22.6 22.7 49 29-83 15-67 (265)
No 1
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=1.6e-17 Score=125.36 Aligned_cols=69 Identities=25% Similarity=0.394 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCCcc
Q 014143 336 DLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKG 404 (430)
Q Consensus 336 ~L~~~i~~~~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~~~ 404 (430)
.|++++++|||+.+.+||++|+|++||+.|++|++++|.+|++||.+|+|+|+|||++|+|+|..++..
T Consensus 11 ~L~~~i~Ehni~~is~~Y~~Isl~~la~~l~l~~~evE~~l~~mI~~~~i~akIDq~~g~V~F~~~e~~ 79 (84)
T d1ufma_ 11 ILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREAS 79 (84)
T ss_dssp CCCHHHHHHHHHHHHHSCSEEEHHHHHHHTTSCHHHHHHHHHHHHHTTSSCEEEETTTTEEEECCSSCC
T ss_pred HHHHHHHHHHHHHHHHhhceeeHHHHHHHHCCCHHHHHHHHHHHHhcCeEEEEEeCCCCEEEECCCCcC
Confidence 468899999999999999999999999999999999999999999999999999999999999887543
No 2
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.05 E-value=1.2e-07 Score=87.37 Aligned_cols=236 Identities=10% Similarity=0.058 Sum_probs=159.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhh
Q 014143 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (430)
Q Consensus 53 ~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ 132 (430)
....+.+++.+|..+|+|+++++.|.+.........++...+....++...+....+ .+...+.++.+.+......+.
T Consensus 36 Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~--~~~A~~~~~~a~~~~~~~~~~ 113 (290)
T d1qqea_ 36 AADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGN--SVNAVDSLENAIQIFTHRGQF 113 (290)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHhhHHhhhcccc
Confidence 456788999999999999999999999999864444566677888888887765333 445666777776655544444
Q ss_pred hhHHHHhHHHHHHHHH-hccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 014143 133 RLWFKTNLKLCKIWFD-MGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (430)
Q Consensus 133 kl~~r~~~~La~~~~~-~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~ 211 (430)
.....+..++|.+++. .|++++|.+.+++......... . ......++...+.++...|++.+|..++.++...
T Consensus 114 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~---~---~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~ 187 (290)
T d1qqea_ 114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ---S---VALSNKCFIKCADLKALDGQYIEASDIYSKLIKS 187 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT---C---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcC---c---hhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHh
Confidence 4445777799999876 5999999999988877654321 1 1445678888899999999999999999988765
Q ss_pred hccCCCch-hHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHhhCCCCCCCCccccccCC
Q 014143 212 KSAIPHPR-IMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYK 290 (430)
Q Consensus 212 ~~~~~~~~-~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~~~~~~~~~~~~lky~~l~~lL~~~~~~~~~~~~~~~~~ 290 (430)
........ ....+....|+.+...+++..|...|-.+.+ ++| .+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~A~~~~~~~~~---------------------------~~~-------~~~ 233 (290)
T d1qqea_ 188 SMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQS---------------------------EDP-------NFA 233 (290)
T ss_dssp TSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGC---------------------------C------------
T ss_pred CccchhhhhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHH---------------------------hCC-------Ccc
Confidence 44333211 1223445556666666666665544333311 111 011
Q ss_pred CCcchHHHHHHHHHHhhCCHHHHHHHHHHhHHhhcCChhH
Q 014143 291 NDPEILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFI 330 (430)
Q Consensus 291 ~~~~~~~l~~L~~af~~~dl~~f~~~l~~~~~~l~~D~~l 330 (430)
+.++...+..|+.++..+|...|.+.+..|......||+-
T Consensus 234 ~sre~~~l~~l~~a~~~~d~e~~~eai~~y~~~~~lD~~~ 273 (290)
T d1qqea_ 234 DSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWK 273 (290)
T ss_dssp ----HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHHH
T ss_pred chHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCHHH
Confidence 1123445567788888888888888888887666778754
No 3
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.82 E-value=4.7e-07 Score=83.34 Aligned_cols=176 Identities=10% Similarity=0.035 Sum_probs=127.6
Q ss_pred CCHHHHHHHHHHhhcCCc--cchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcC-
Q 014143 30 TDPEGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG- 106 (430)
Q Consensus 30 ~~~~~Ai~~~~~ii~~~~--~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~- 106 (430)
+++++|++.|.+.++... .+......++.+++.+|.+.|+++++++.|...+......-...........+...+..
T Consensus 51 ~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~ 130 (290)
T d1qqea_ 51 KELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEND 130 (290)
T ss_dssp TCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhH
Confidence 468999999999987543 23334678999999999999999999999999999873333455556666666665532
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHH
Q 014143 107 SASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYA 186 (430)
Q Consensus 107 ~~~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l 186 (430)
..+ .+...+.++.+.+.....++......+..++|.++...|+|++|.+.++++.......+.. ....-..+.
T Consensus 131 ~~~--~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 203 (290)
T d1qqea_ 131 LHD--YAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS-----QWSLKDYFL 203 (290)
T ss_dssp TCC--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT-----GGGHHHHHH
T ss_pred HHH--HHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchhh-----hhhHHHHHH
Confidence 233 6667788888877655433334445777899999999999999999999988875443211 122334455
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 187 IEIQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 187 ~~~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
..+..++..+++..|...+.++..+.
T Consensus 204 ~~~~~~l~~~d~~~A~~~~~~~~~~~ 229 (290)
T d1qqea_ 204 KKGLCQLAATDAVAAARTLQEGQSED 229 (290)
T ss_dssp HHHHHHHHTTCHHHHHHHHHGGGCC-
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 55667888999999999988876554
No 4
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.64 E-value=3e-06 Score=78.12 Aligned_cols=201 Identities=13% Similarity=0.107 Sum_probs=127.0
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhh------------hhHH-
Q 014143 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTR------------NYSE- 94 (430)
Q Consensus 28 ~~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k------------~~~~- 94 (430)
..+++++|++.|+++++.+|++ ..++..+|.+|...|+++++.+.+.+.+..- +.... ....
T Consensus 31 ~~g~~~~A~~~~~~al~~~P~~----~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~ 105 (323)
T d1fcha_ 31 QEGDLPNAVLLFEAAVQQDPKH----MEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQRQ 105 (323)
T ss_dssp HTTCHHHHHHHHHHHHHSCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCChHHHHHHHHhhhccc-cccccccccccccccccccccc
Confidence 4568999999999999998764 5688999999999999999999999988753 32111 1111
Q ss_pred --HHHHHHHHHhcCCCC-----------CC---------hhHHHHHHHHHHHHHHHh---hhhhhHHHHhHHHHHHHHHh
Q 014143 95 --KCINNIMDFVSGSAS-----------QN---------FSLLREFYQTTLKALEEA---KNERLWFKTNLKLCKIWFDM 149 (430)
Q Consensus 95 --k~v~~il~~~~~~~~-----------~~---------~~~~~~~~~~~~e~l~~~---~~~kl~~r~~~~La~~~~~~ 149 (430)
+....++......+. .+ .-.....+..+.+..+.+ .....-..+...+|.++...
T Consensus 106 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~ 185 (323)
T d1fcha_ 106 ACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLS 185 (323)
T ss_dssp HHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHT
T ss_pred cccchhhHHHhccchHHHHHhhhhhhhhcccccchhhHHHHHHhhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Confidence 222222221111000 00 000011111122211111 00000113345788999999
Q ss_pred ccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCchhHHHHHHhhh
Q 014143 150 GEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGG 229 (430)
Q Consensus 150 g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~~~~~~~~~~~g 229 (430)
|++++|...+.+...... ...+.+...+.++...|++.+|..+++++.+.. |. .+..+...|
T Consensus 186 ~~~~~A~~~~~~al~~~p------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~-~~~a~~~lg 247 (323)
T d1fcha_ 186 GEYDKAVDCFTAALSVRP------------NDYLLWNKLGATLANGNQSEEAVAAYRRALELQ-----PG-YIRSRYNLG 247 (323)
T ss_dssp TCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT-CHHHHHHHH
T ss_pred HHHhhhhccccccccccc------------ccccchhhhhhcccccccchhHHHHHHHHHHHh-----hc-cHHHHHHHH
Confidence 999999999988876632 123566667788899999999999999887653 22 122344558
Q ss_pred HhhhhhhcHHHHHHHHHHHHHh
Q 014143 230 KMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 230 ~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
.++...|+|.+|..+|.++.+.
T Consensus 248 ~~~~~~g~~~~A~~~~~~al~l 269 (323)
T d1fcha_ 248 ISCINLGAHREAVEHFLEALNM 269 (323)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHh
Confidence 8888999999999999888764
No 5
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=98.60 E-value=1.4e-05 Score=72.96 Aligned_cols=216 Identities=8% Similarity=-0.028 Sum_probs=149.3
Q ss_pred cCCCCHHHHHHHHHHhhcCCccc-hhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhc
Q 014143 27 LVETDPEGALAGFAEVVAMEPEK-AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (430)
Q Consensus 27 ~~~~~~~~Ai~~~~~ii~~~~~~-~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~ 105 (430)
+..+++++|++.|++.++..+++ ......++..++.+|...|+++++.+.+...+..................+...+.
T Consensus 23 ~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (366)
T d1hz4a_ 23 INDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF 102 (366)
T ss_dssp HHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 35678999999999999987743 33356788999999999999999999999998876222222333333333333333
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhhhhh--hHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHH
Q 014143 106 GSASQNFSLLREFYQTTLKALEEAKNER--LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLE 183 (430)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~e~l~~~~~~k--l~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e 183 (430)
...+ .......+...+.......... ........+|.++...|+++.|...+........... . .....
T Consensus 103 ~~~~--~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~---~----~~~~~ 173 (366)
T d1hz4a_ 103 AQGF--LQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ---P----QQQLQ 173 (366)
T ss_dssp HTTC--HHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC---G----GGGHH
T ss_pred HHHH--HHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHhhhhh---h----hhHHH
Confidence 2222 4444555555555433321111 2224556899999999999999999998888765321 1 23345
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-chhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 184 VYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-PRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 184 ~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
.+......+...+++.++...+..+......... +..........|.++...+++..|..++..+...
T Consensus 174 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 242 (366)
T d1hz4a_ 174 CLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKP 242 (366)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 5666678888999999999999888766555443 4445566677788888999999999888877553
No 6
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=98.24 E-value=0.0001 Score=67.02 Aligned_cols=212 Identities=9% Similarity=0.009 Sum_probs=135.8
Q ss_pred CCHHHHHHHHHHhhcCCc----cchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhc
Q 014143 30 TDPEGALAGFAEVVAMEP----EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (430)
Q Consensus 30 ~~~~~Ai~~~~~ii~~~~----~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~ 105 (430)
+++..|++.+...+...+ ........+...++.++...|+++.+...+....... +.................+.
T Consensus 105 ~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 183 (366)
T d1hz4a_ 105 GFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL-SSYQPQQQLQCLAMLIQCSL 183 (366)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TTSCGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHh-hhhhhhhHHHHHHHHHHHHH
Confidence 456666666666654322 1122234566778999999999999999999998876 33233222333322222222
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhhhhhh-HHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHH
Q 014143 106 GSASQNFSLLREFYQTTLKALEEAKNERL-WFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEV 184 (430)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~e~l~~~~~~kl-~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~ 184 (430)
...+ .......+............... ...+...++.++...|++++|...+......... + .......
T Consensus 184 ~~~~--~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-----~---~~~~~~~ 253 (366)
T d1hz4a_ 184 ARGD--LDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA-----N---NHFLQGQ 253 (366)
T ss_dssp HHTC--HHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCT-----T---CGGGHHH
T ss_pred hhhh--HHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccc-----c---chHHHHH
Confidence 1111 22233333333332222211111 2244557888999999999999988876554321 1 1334455
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhh
Q 014143 185 YAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (430)
Q Consensus 185 ~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~ 252 (430)
+...++++...|++.+|...++++.........+...+..+...|.++...|++.+|...|-++.+-.
T Consensus 254 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~ 321 (366)
T d1hz4a_ 254 WRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLA 321 (366)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 56678899999999999999999987766665555566677778999999999999999999987643
No 7
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17 E-value=9.1e-05 Score=68.29 Aligned_cols=186 Identities=13% Similarity=0.175 Sum_probs=100.9
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCC
Q 014143 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (430)
Q Consensus 29 ~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~ 108 (430)
.+++++|+..+.+.++.+|+. ..++..++.++...|+++++++.+....... +... .....+...+....
T Consensus 182 ~~~~~~A~~~~~~al~~~p~~----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~-----~~~~~l~~~~~~~~ 251 (388)
T d1w3ba_ 182 QGEIWLAIHHFEKAVTLDPNF----LDAYINLGNVLKEARIFDRAVAAYLRALSLS-PNHA-----VVHGNLACVYYEQG 251 (388)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC-TTCH-----HHHHHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHHHHhCccc----HHHHHHHhhhhhccccHHHHHHHHHHhHHHh-hhHH-----HHHHHHHHHHHHCC
Confidence 345677777777777666543 3455667777777777777777777666543 2111 11111222111111
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHH
Q 014143 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (430)
Q Consensus 109 ~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~ 188 (430)
+ .+.....++.+++. .++ .......+|.++...|++.+|.+.+......... ....+...
T Consensus 252 ~--~~~A~~~~~~al~~---~p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------------~~~~~~~l 311 (388)
T d1w3ba_ 252 L--IDLAIDTYRRAIEL---QPH---FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT------------HADSLNNL 311 (388)
T ss_dssp C--HHHHHHHHHHHHHT---CSS---CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT------------CHHHHHHH
T ss_pred C--HHHHHHHHHHHHHh---CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc------------cchhhhHH
Confidence 1 22333333333221 110 1122346777777777777777777766555321 12334444
Q ss_pred HHHHHhhcCHHHHHHHHHHHHhhhccCCCchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHH
Q 014143 189 IQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (430)
Q Consensus 189 ~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~ 250 (430)
+.++...|++.+|...++++... +|.. +..+...|.++...|+|.+|..+|-++.+
T Consensus 312 ~~~~~~~~~~~~A~~~~~~al~~-----~p~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~ 367 (388)
T d1w3ba_ 312 ANIKREQGNIEEAVRLYRKALEV-----FPEF-AAAHSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp HHHHHTTTCHHHHHHHHHHHTTS-----CTTC-HHHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHHHHh-----CCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56677777777777777766533 2221 22334446677777777777777777754
No 8
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.08 E-value=0.00023 Score=65.48 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=66.4
Q ss_pred HhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 014143 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (430)
Q Consensus 138 ~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~ 217 (430)
....+|..+...|++++|...+.+....-+ ...+.+...+.++...|++.+|...++++......
T Consensus 171 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--- 235 (388)
T d1w3ba_ 171 AWSNLGCVFNAQGEIWLAIHHFEKAVTLDP------------NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN--- 235 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT---
T ss_pred HHHhhcccccccCcHHHHHHHHHHHHHhCc------------ccHHHHHHHhhhhhccccHHHHHHHHHHhHHHhhh---
Confidence 345778888888999999888887766521 12455666677888888888888888877544211
Q ss_pred chhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHH
Q 014143 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (430)
Q Consensus 218 ~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~ 250 (430)
....+...|.++...++|.+|...|-++.+
T Consensus 236 ---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 265 (388)
T d1w3ba_ 236 ---HAVVHGNLACVYYEQGLIDLAIDTYRRAIE 265 (388)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 122333457777788888888888888765
No 9
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90 E-value=0.00057 Score=62.04 Aligned_cols=170 Identities=9% Similarity=0.015 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhh--------------------
Q 014143 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAV-------------------- 88 (430)
Q Consensus 29 ~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~-------------------- 88 (430)
.+++++|++.|.+.++.+|++ ..++..++.+|...|+++++.+.+...+... +..
T Consensus 66 ~~~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 140 (323)
T d1fcha_ 66 NEQELLAISALRRCLELKPDN----QTALMALAVSFTNESLQRQACEILRDWLRYT-PAYAHLVTPAEEGAGGAGLGPSK 140 (323)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS-TTTGGGCC---------------
T ss_pred cCChHHHHHHHHhhhcccccc----ccccccccccccccccccccccchhhHHHhc-cchHHHHHhhhhhhhhcccccch
Confidence 457999999999999988754 4677889999999999999999999887653 210
Q ss_pred -------hhhhHHHHHHHHHHHhcCCCCCChhHHHH----------HHHHHHHHHHHhh-hhhhHHHHhHHHHHHHHHhc
Q 014143 89 -------TRNYSEKCINNIMDFVSGSASQNFSLLRE----------FYQTTLKALEEAK-NERLWFKTNLKLCKIWFDMG 150 (430)
Q Consensus 89 -------~k~~~~k~v~~il~~~~~~~~~~~~~~~~----------~~~~~~e~l~~~~-~~kl~~r~~~~La~~~~~~g 150 (430)
......+.+......+...|+........ -++.+++.++.+. ...-.......+|.++...|
T Consensus 141 ~~~~~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 220 (323)
T d1fcha_ 141 RILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGN 220 (323)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHhhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccccccccccchhhhhhcccccc
Confidence 00111112211111121122211000000 1222222222210 00011244568999999999
Q ss_pred cHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 014143 151 EYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (430)
Q Consensus 151 ~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~ 215 (430)
++++|.+.++.....-+ ...+.+...+.+|...|++.+|...+++|..+.+..
T Consensus 221 ~~~~A~~~~~~al~~~p------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 273 (323)
T d1fcha_ 221 QSEEAVAAYRRALELQP------------GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 273 (323)
T ss_dssp CHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred cchhHHHHHHHHHHHhh------------ccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcC
Confidence 99999999998877621 124567777889999999999999999998765543
No 10
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=0.0045 Score=51.08 Aligned_cols=114 Identities=13% Similarity=0.193 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhhh
Q 014143 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (430)
Q Consensus 54 ~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~k 133 (430)
...++..|..+++.|+|+++++.|+..+..+ +.. +..... ... ....
T Consensus 13 a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~-~~~-------------------~~~~~~-~~~------------~~~~ 59 (170)
T d1p5qa1 13 STIVKERGTVYFKEGKYKQALLQYKKIVSWL-EYE-------------------SSFSNE-EAQ------------KAQA 59 (170)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTC-------------------CCCCSH-HHH------------HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh-hhc-------------------cccchH-HHh------------hhch
Confidence 5677888999999999999999999988876 321 111110 000 0111
Q ss_pred hHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 134 l~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
+...+..++|..|...|+|++|...+.+....-+ ..+..+...+.++..+|++.+|...|.++..+.
T Consensus 60 ~~~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 126 (170)
T d1p5qa1 60 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDS------------NNEKGLSRRGEAHLAVNDFELARADFQKVLQLY 126 (170)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhhhhcccccchhhhhhhccc------------cchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhC
Confidence 2234556899999999999999999999988832 135677788899999999999999999998764
No 11
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=97.59 E-value=0.0052 Score=50.51 Aligned_cols=132 Identities=13% Similarity=0.141 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhh
Q 014143 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (430)
Q Consensus 53 ~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ 132 (430)
....++..|..+++.|+|++++..|...+..+ +. .+....+... ...
T Consensus 14 ~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~-~~-------------------~~~~~~~~~~-------------~~~ 60 (168)
T d1kt1a1 14 QAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWL-EM-------------------EYGLSEKESK-------------ASE 60 (168)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TT-------------------CCSCCHHHHH-------------HHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HH-------------------hhccchhhhh-------------hcc
Confidence 35678889999999999999999999888765 21 1111110000 011
Q ss_pred hhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 133 kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
-+...+..++|..|...|+|++|...+..+...-+ .....+...+..+..+|++.+|...+.++..+.
T Consensus 61 ~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p------------~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~ 128 (168)
T d1kt1a1 61 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS------------ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN 128 (168)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred hhHHHHHHhHHHHHHHhhhcccchhhhhhhhhccc------------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 12234566899999999999999999999988722 134667778889999999999999999987653
Q ss_pred ccCCCchhHHHHHHhhhHh
Q 014143 213 SAIPHPRIMGIIRECGGKM 231 (430)
Q Consensus 213 ~~~~~~~~~~~~~~~~g~~ 231 (430)
+. ++.+...+..+...+
T Consensus 129 P~--n~~~~~~l~~~~~~~ 145 (168)
T d1kt1a1 129 PQ--NKAARLQIFMCQKKA 145 (168)
T ss_dssp TT--CHHHHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHHH
Confidence 21 244444444443333
No 12
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=97.57 E-value=0.0026 Score=55.41 Aligned_cols=121 Identities=14% Similarity=0.136 Sum_probs=75.1
Q ss_pred HHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCC
Q 014143 32 PEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 111 (430)
Q Consensus 32 ~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~ 111 (430)
.+.|+..+.+++............++..+|.+|.+.|+++++.+.|++.+... |.... +...+...+....+
T Consensus 15 ~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~-p~~~~-----a~~~lg~~~~~~g~-- 86 (259)
T d1xnfa_ 15 QEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPE-----VFNYLGIYLTQAGN-- 86 (259)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHH-----HHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccC-CCCHH-----HHhhhchHHHHHHH--
Confidence 56778888888776542233356778888888888888888888888888764 43222 23333333332222
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhc
Q 014143 112 FSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSC 166 (430)
Q Consensus 112 ~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~ 166 (430)
.+.....++.+++. .+ + .......+|.++...|++++|.+.+.......
T Consensus 87 ~~~A~~~~~~al~~-~p--~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~ 135 (259)
T d1xnfa_ 87 FDAAYEAFDSVLEL-DP--T---YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD 135 (259)
T ss_dssp HHHHHHHHHHHHHH-CT--T---CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHhhhhhhHHHHH-Hh--h---hhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Confidence 33444444444431 11 1 11234578888888888888888888877664
No 13
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.56 E-value=0.00095 Score=52.61 Aligned_cols=100 Identities=13% Similarity=0.143 Sum_probs=82.5
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCc-
Q 014143 140 LKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHP- 218 (430)
Q Consensus 140 ~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~- 218 (430)
..+|..++..|+|++|.+.+.+.....++ ....+...+.+|..+|++.+|...++++..+.+....+
T Consensus 8 k~~G~~~~~~~~y~~Ai~~y~~al~~~p~------------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 8 KELGNDAYKKKDFDTALKHYDKAKELDPT------------NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcc------------cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 47999999999999999999999988321 24577778899999999999999999998777665543
Q ss_pred hhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 219 RIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 219 ~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
...+..+...|..+...++|.+|..+|-.+...
T Consensus 76 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 108 (128)
T d1elra_ 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (128)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 345677788899999999999999999888653
No 14
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=97.55 E-value=0.0038 Score=54.29 Aligned_cols=61 Identities=5% Similarity=-0.196 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~ 211 (430)
...+|.++...|++++|.+.+.+....-++ ..+.+...+.++..+|++.+|...++++...
T Consensus 74 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 134 (259)
T d1xnfa_ 74 FNYLGIYLTQAGNFDAAYEAFDSVLELDPT------------YNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 134 (259)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HhhhchHHHHHHHHHHhhhhhhHHHHHHhh------------hhhhHHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 346777777777777777777777666221 1234555566677777777777777766543
No 15
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.35 E-value=0.0023 Score=52.11 Aligned_cols=29 Identities=17% Similarity=0.438 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 014143 54 FKALKQTVKLYYRLGKYKEMMDAYREMLT 82 (430)
Q Consensus 54 ~k~l~~l~~l~~~~~~~~~l~e~~~~l~~ 82 (430)
...+++-|..|++.|+|+++++.|.+.+.
T Consensus 10 a~~l~~~gn~~~~~~~y~~A~~~~~~al~ 38 (159)
T d1a17a_ 10 AEELKTQANDYFKAKDYENAIKFYSQAIE 38 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhhhccc
Confidence 34444555555555555555555555544
No 16
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.24 E-value=0.0051 Score=51.90 Aligned_cols=129 Identities=18% Similarity=0.111 Sum_probs=90.7
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCC
Q 014143 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (430)
Q Consensus 28 ~~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~ 107 (430)
..+|+++|++.|.++... + .+++.++|.+|...|+++++.+.|++.+..-
T Consensus 17 ~~~d~~~Al~~~~~i~~~---~----~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ld----------------------- 66 (192)
T d1hh8a_ 17 DKKDWKGALDAFSAVQDP---H----SRICFNIGCMYTILKNMTEAEKAFTRSINRD----------------------- 66 (192)
T ss_dssp HTTCHHHHHHHHHTSSSC---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----------------------
T ss_pred HCCCHHHHHHHHHhcCCC---C----HHHHHHHHHHHHHcCCchhHHHHHHHHHHHh-----------------------
Confidence 356799999999886321 1 3577899999999999999999999887642
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchh----hcchHHH
Q 014143 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK----KGSQLLE 183 (430)
Q Consensus 108 ~~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~----~~~~~~e 183 (430)
|+ . ......+|.++.+.|+|++|.+.+.+........+..+... ......+
T Consensus 67 p~--~-----------------------~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e 121 (192)
T d1hh8a_ 67 KH--L-----------------------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACE 121 (192)
T ss_dssp TT--C-----------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHH
T ss_pred hh--h-----------------------hhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhcccchHH
Confidence 32 1 01134788999999999999988888765433211000000 0112357
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 014143 184 VYAIEIQMYTETKNNKKLKQLYQKALAI 211 (430)
Q Consensus 184 ~~l~~~~l~~~~~d~~ka~~~l~~a~~~ 211 (430)
++...+.++...|++.+|...+..|...
T Consensus 122 ~~~n~a~~~~~~~~~~~A~~~l~~A~~~ 149 (192)
T d1hh8a_ 122 VLYNIAFMYAKKEEWKKAEEQLALATSM 149 (192)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 7777788889999999999988887654
No 17
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.19 E-value=0.0013 Score=50.90 Aligned_cols=87 Identities=11% Similarity=0.131 Sum_probs=71.6
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCC
Q 014143 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (430)
Q Consensus 28 ~~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~ 107 (430)
..+++++|+..|.++++.+|++ ..++..++.+|...|+++++++.+...++..
T Consensus 15 ~~g~~~eAi~~~~~al~~~p~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~----------------------- 67 (117)
T d1elwa_ 15 SVGNIDDALQCYSEAIKLDPHN----HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK----------------------- 67 (117)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----------------------
T ss_pred HcCCHHHHHHHHHHHHhcCCcc----hhhhhcccccccccccccccchhhhhHHHhc-----------------------
Confidence 3567999999999999988754 6788999999999999999999998888763
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhc
Q 014143 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSC 166 (430)
Q Consensus 108 ~~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~ 166 (430)
|+ +. ....++|.++...|+|++|...+++.....
T Consensus 68 p~-~~------------------------~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 101 (117)
T d1elwa_ 68 PD-WG------------------------KGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101 (117)
T ss_dssp TT-CH------------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred cc-hh------------------------hHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 32 01 113588999999999999999999998874
No 18
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.11 E-value=0.0028 Score=49.75 Aligned_cols=92 Identities=12% Similarity=0.254 Sum_probs=69.6
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCC
Q 014143 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (430)
Q Consensus 29 ~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~ 108 (430)
.+++++|++.|.++++.+|++ ..++.+++.+|.+.|+|+++++.+...+..- +.. +
T Consensus 17 ~~~y~~Ai~~y~~al~~~p~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-~~~-------------------~ 72 (128)
T d1elra_ 17 KKDFDTALKHYDKAKELDPTN----MTYITNQAAVYFEKGDYNKCRELCEKAIEVG-REN-------------------R 72 (128)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHS-------------------T
T ss_pred cCCHHHHHHHHHHHHHhCccc----HHHHHhHHHHHHHcCchHHHHHHHHHHHHhC-ccc-------------------H
Confidence 367899999999999887754 4688889999999999999999998887764 321 1
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhh
Q 014143 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKS 165 (430)
Q Consensus 109 ~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~ 165 (430)
. . . ....++..++|..+...|++++|.+.+......
T Consensus 73 ~--~-----~--------------~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 108 (128)
T d1elra_ 73 E--D-----Y--------------RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (128)
T ss_dssp T--C-----H--------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred H--H-----H--------------HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 1 0 0 011144669999999999999999998777654
No 19
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=97.07 E-value=0.0015 Score=50.11 Aligned_cols=83 Identities=13% Similarity=-0.005 Sum_probs=67.7
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCC
Q 014143 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (430)
Q Consensus 28 ~~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~ 107 (430)
..+++++|+..|++++..+|+. ..++..+|.++...|+++++...+.+.+...
T Consensus 28 ~~g~~~~A~~~~~~al~~~p~~----~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~----------------------- 80 (112)
T d1hxia_ 28 KLANLAEAALAFEAVCQKEPER----EEAWRSLGLTQAENEKDGLAIIALNHARMLD----------------------- 80 (112)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----------------------
T ss_pred HHhhhHHHHHHHhhhccccccc----chhhhhhhhhhhhhhhHHHhhcccccccccc-----------------------
Confidence 3567999999999999988754 6788999999999999999999998877753
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHH
Q 014143 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKEL 162 (430)
Q Consensus 108 ~~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el 162 (430)
|+ +. .....||..|...|++++|.+.+++.
T Consensus 81 p~-~~------------------------~a~~~la~~y~~~g~~~~A~~~l~~~ 110 (112)
T d1hxia_ 81 PK-DI------------------------AVHAALAVSHTNEHNANAALASLRAW 110 (112)
T ss_dssp TT-CH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-cc------------------------cchHHHHHHHHHCCCHHHHHHHHHHH
Confidence 33 00 11348899999999999999998875
No 20
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.05 E-value=0.0038 Score=52.08 Aligned_cols=101 Identities=13% Similarity=0.014 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhhh
Q 014143 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (430)
Q Consensus 54 ~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~k 133 (430)
...|++.|..+++.|+|++++++|+..+..- |+ +.
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~-----------------------p~-~~--------------------- 38 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRN-----------------------PL-VA--------------------- 38 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----------------------SC-CH---------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----------------------CC-CH---------------------
Confidence 3568899999999999999999998887753 33 10
Q ss_pred hHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 014143 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (430)
Q Consensus 134 l~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~ 213 (430)
.....+|..|...|+|++|...+......- ...+..+...+.++..+|++.+|...+++|..+.+
T Consensus 39 ---~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~------------p~~~~a~~~lg~~~~~l~~~~~A~~~~~~al~l~p 103 (201)
T d2c2la1 39 ---VYYTNRALCYLKMQQPEQALADCRRALELD------------GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (201)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHHTTSC------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHhHHHHHhhhhhhhhhhHHHHHHHHhC------------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 123478899999999999999998886652 12345677788899999999999999999877654
Q ss_pred c
Q 014143 214 A 214 (430)
Q Consensus 214 ~ 214 (430)
.
T Consensus 104 ~ 104 (201)
T d2c2la1 104 E 104 (201)
T ss_dssp H
T ss_pred c
Confidence 3
No 21
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.03 E-value=0.0041 Score=47.88 Aligned_cols=94 Identities=12% Similarity=0.027 Sum_probs=75.7
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCchh
Q 014143 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRI 220 (430)
Q Consensus 141 ~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~~~ 220 (430)
..|..++..|+|++|...+.+.....+. ...++...+.++..+|++.+|...++++..+.+. ++
T Consensus 8 ~~g~~~~~~g~~~eAi~~~~~al~~~p~------------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~-- 71 (117)
T d1elwa_ 8 EKGNKALSVGNIDDALQCYSEAIKLDPH------------NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD--WG-- 71 (117)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CH--
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc------------chhhhhcccccccccccccccchhhhhHHHhccc--hh--
Confidence 5789999999999999999999887431 2457777788999999999999999999866432 11
Q ss_pred HHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhh
Q 014143 221 MGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (430)
Q Consensus 221 ~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~ 252 (430)
..+...|.++...++|.+|...|..+.+..
T Consensus 72 --~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 101 (117)
T d1elwa_ 72 --KGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101 (117)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred --hHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 234556889999999999999999998643
No 22
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.02 E-value=0.0029 Score=52.85 Aligned_cols=94 Identities=10% Similarity=0.064 Sum_probs=74.6
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCchh
Q 014143 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRI 220 (430)
Q Consensus 141 ~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~~~ 220 (430)
..|..++..|+|++|.+.+.+....-+ ....++...+.+|...|++.+|...+++|..+ +|..
T Consensus 9 ~~Gn~~~~~g~~~~Ai~~~~kal~~~p------------~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l-----~p~~ 71 (201)
T d2c2la1 9 EQGNRLFVGRKYPEAAACYGRAITRNP------------LVAVYYTNRALCYLKMQQPEQALADCRRALEL-----DGQS 71 (201)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCS------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-----CTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC------------CCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHh-----CCCc
Confidence 678999999999999999999887732 12456777788999999999999999998654 3332
Q ss_pred HHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhh
Q 014143 221 MGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (430)
Q Consensus 221 ~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~ 252 (430)
...+...|.++...|+|.+|..+|..+.+..
T Consensus 72 -~~a~~~lg~~~~~l~~~~~A~~~~~~al~l~ 102 (201)
T d2c2la1 72 -VKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102 (201)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 1234456899999999999999999997643
No 23
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=97.01 E-value=0.0046 Score=47.21 Aligned_cols=92 Identities=8% Similarity=-0.010 Sum_probs=73.2
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCc
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHP 218 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~ 218 (430)
.+.+|..+...|++.+|...++++....+ ...+.+...+.++...+++.+|...++++..+. |
T Consensus 19 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p------------~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-----p 81 (112)
T d1hxia_ 19 PMEEGLSMLKLANLAEAALAFEAVCQKEP------------EREEAWRSLGLTQAENEKDGLAIIALNHARMLD-----P 81 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhccccc------------ccchhhhhhhhhhhhhhhHHHhhcccccccccc-----c
Confidence 35789999999999999999999988732 124677777889999999999999999997663 2
Q ss_pred hhHHHHHHhhhHhhhhhhcHHHHHHHHHHH
Q 014143 219 RIMGIIRECGGKMHMAERQWADAATDFFEA 248 (430)
Q Consensus 219 ~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea 248 (430)
.. ...+...|.++...|++.+|...|-+.
T Consensus 82 ~~-~~a~~~la~~y~~~g~~~~A~~~l~~~ 110 (112)
T d1hxia_ 82 KD-IAVHAALAVSHTNEHNANAALASLRAW 110 (112)
T ss_dssp TC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-ccchHHHHHHHHHCCCHHHHHHHHHHH
Confidence 21 234455688999999999999887654
No 24
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=96.98 E-value=0.015 Score=46.84 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhhh
Q 014143 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (430)
Q Consensus 54 ~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~k 133 (430)
...++.-|.-+++.|+|++++..|+..+... +.. +......... ....
T Consensus 17 a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~-~~~-------------------~~~~~~~~~~------------~~~~ 64 (153)
T d2fbna1 17 AFDIKEEGNEFFKKNEINEAIVKYKEALDFF-IHT-------------------EEWDDQILLD------------KKKN 64 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-TTC-------------------TTCCCHHHHH------------HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cch-------------------hhhhhHHHHH------------hhhh
Confidence 4567778999999999999999999888765 221 1111100000 0011
Q ss_pred hHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 134 l~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
+.+.+..++|..|...|+|++|.+.++.....-+ ..+..+...+..+..+|++..|...+.++..+.
T Consensus 65 ~~~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p------------~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~ 131 (153)
T d2fbna1 65 IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDK------------NNVKALYKLGVANMYFGFLEEAKENLYKAASLN 131 (153)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHhhHHHHHHHhcccchhhhhhhccccccc------------hhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 2234556899999999999999999999877721 124677888999999999999999999998764
No 25
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.97 E-value=0.0085 Score=49.31 Aligned_cols=107 Identities=15% Similarity=0.097 Sum_probs=78.8
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcch---hhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQ---KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~---~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~ 215 (430)
....|..++..|+|++|...+++.........+..+. ........++...+.+|..+|++.+|...++++..+.
T Consensus 16 l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~al~~~--- 92 (170)
T d1p5qa1 16 VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD--- 92 (170)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhhhhcc---
Confidence 3478899999999999999999888776543322110 0123345566667788999999999999999998763
Q ss_pred CCchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
|... ..+...|.++...|+|..|..+|-++.+.
T Consensus 93 --p~~~-~a~~~~g~~~~~~g~~~~A~~~~~~al~l 125 (170)
T d1p5qa1 93 --SNNE-KGLSRRGEAHLAVNDFELARADFQKVLQL 125 (170)
T ss_dssp --TTCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --ccch-hhhHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3222 23445689999999999999999998763
No 26
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=0.0048 Score=50.06 Aligned_cols=94 Identities=13% Similarity=0.029 Sum_probs=75.3
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCch
Q 014143 140 LKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPR 219 (430)
Q Consensus 140 ~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~~ 219 (430)
...|..++..|+|++|...+++....-. .....+...+.++...|++.+|...++++.... |.
T Consensus 14 ~~~gn~~~~~~~y~~A~~~~~~al~~~p------------~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~-----p~ 76 (159)
T d1a17a_ 14 KTQANDYFKAKDYENAIKFYSQAIELNP------------SNAIYYGNRSLAYLRTECYGYALGDATRAIELD-----KK 76 (159)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHST------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT
T ss_pred HHHHHHHHHcCCHHHHHHHhhhccccch------------hhhhhhhhhHHHHHhccccchHHHHHHHHHHHc-----cc
Confidence 4678999999999999999999988732 135677788899999999999999999997664 22
Q ss_pred hHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 220 IMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 220 ~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
. ...+...|.++...|+|.+|...|..+...
T Consensus 77 ~-~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~ 107 (159)
T d1a17a_ 77 Y-IKGYYRRAASNMALGKFRAALRDYETVVKV 107 (159)
T ss_dssp C-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred c-hHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 1 123344588899999999999999998764
No 27
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=96.81 E-value=0.011 Score=47.82 Aligned_cols=115 Identities=10% Similarity=-0.058 Sum_probs=81.8
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC--C-
Q 014143 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP--H- 217 (430)
Q Consensus 141 ~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~--~- 217 (430)
..|..++..|+|++|...+.+........+..............+...+..|..+|++.+|...++.+..+.+... .
T Consensus 14 ~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~~ 93 (156)
T d2hr2a1 14 SDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQ 93 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccccccccc
Confidence 4478899999999999999998887655432110000122345666778889999999999999999977654322 1
Q ss_pred --chhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhhhhh
Q 014143 218 --PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEA 255 (430)
Q Consensus 218 --~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~~~~ 255 (430)
+......+.-.|.++...|+|.+|..+|-++.+.+.+.
T Consensus 94 ~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~ 133 (156)
T d2hr2a1 94 DEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 133 (156)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred cccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 12233334456899999999999999999998876543
No 28
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.76 E-value=0.011 Score=53.90 Aligned_cols=100 Identities=6% Similarity=-0.151 Sum_probs=63.8
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH- 217 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~- 217 (430)
...+|.++...|++++|.+.+.+....-. .-...+...+.++...+++.+|...++++..+...-..
T Consensus 115 ~~~~~~~~~~l~~~~eAl~~~~kal~~dp------------~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a 182 (315)
T d2h6fa1 115 WHHRRVLVEWLRDPSQELEFIADILNQDA------------KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSV 182 (315)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHH
T ss_pred HHHHhHHHHhhccHHHHHHHHhhhhhhhh------------cchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHH
Confidence 44678888889999999999998887721 12456667778888999999999999988765321110
Q ss_pred chhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 218 ~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
....+.+....|. +...+++.+|..++..+.+.
T Consensus 183 ~~~r~~~l~~~~~-~~~~~~~~~ai~~~~~al~~ 215 (315)
T d2h6fa1 183 WNQRYFVISNTTG-YNDRAVLEREVQYTLEMIKL 215 (315)
T ss_dssp HHHHHHHHHHTTC-SCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccc-cchhhhhHHhHHHHHHHHHh
Confidence 0111211111111 22455677788777777653
No 29
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=96.75 E-value=0.016 Score=46.70 Aligned_cols=105 Identities=17% Similarity=0.043 Sum_probs=77.7
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchh----hcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 014143 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK----KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (430)
Q Consensus 141 ~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~----~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~ 216 (430)
.-|.-++..|+|.+|...+++....+......++.. .....+.++...+..|..+|++.+|-..++++....
T Consensus 22 ~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~---- 97 (153)
T d2fbna1 22 EEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID---- 97 (153)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhcccccc----
Confidence 567788889999999999998887665443222210 122345566677888999999999999999987653
Q ss_pred CchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 217 ~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
|.. ...+...|.++...|+|.+|..+|..+.+.
T Consensus 98 -p~~-~ka~~~~g~~~~~lg~~~~A~~~~~~al~l 130 (153)
T d2fbna1 98 -KNN-VKALYKLGVANMYFGFLEEAKENLYKAASL 130 (153)
T ss_dssp -TTC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -chh-hhhhHHhHHHHHHcCCHHHHHHHHHHHHHh
Confidence 322 124455699999999999999999999764
No 30
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=96.72 E-value=0.007 Score=48.98 Aligned_cols=105 Identities=11% Similarity=0.126 Sum_probs=76.1
Q ss_pred CCCCHHHHHHHHHHhhcCCccc--------hhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 014143 28 VETDPEGALAGFAEVVAMEPEK--------AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINN 99 (430)
Q Consensus 28 ~~~~~~~Ai~~~~~ii~~~~~~--------~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~ 99 (430)
..+++++|+..|.+.++..++. ......++.+++.+|.+.|+|+++++.++..+... +..
T Consensus 21 ~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~-~~~----------- 88 (156)
T d2hr2a1 21 VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF-NRR----------- 88 (156)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHH-----------
T ss_pred HcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcc-ccc-----------
Confidence 3468999999999999865421 11234678899999999999999999999998876 321
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCC
Q 014143 100 IMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (430)
Q Consensus 100 il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~ 169 (430)
....+. ....+.....++|..|...|++++|...+++........
T Consensus 89 ----~~~~~~---------------------~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~ 133 (156)
T d2hr2a1 89 ----GELNQD---------------------EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 133 (156)
T ss_dssp ----CCTTST---------------------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred ----cccccc---------------------ccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 000011 112233445689999999999999999998877765443
No 31
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=96.70 E-value=0.03 Score=45.56 Aligned_cols=115 Identities=14% Similarity=0.112 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhhh
Q 014143 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (430)
Q Consensus 54 ~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~k 133 (430)
...++..+..++..|+++++++.|++.+.+. +.... . .. . ... ..-..
T Consensus 27 a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~-~~~~~-~---------------~~--~---~~~----------~~~~~ 74 (169)
T d1ihga1 27 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYV-EGSRA-A---------------AE--D---ADG----------AKLQP 74 (169)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHHH-H---------------SC--H---HHH----------GGGHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh-hhhhh-h---------------hh--h---HHH----------HHhCh
Confidence 3456778999999999999999999887765 21100 0 00 0 000 00011
Q ss_pred hHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 134 l~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
....+...+|..+...|+|++|...+..+...- ....+.+...+..+..+|++.+|...+.++..+.
T Consensus 75 ~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~------------p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~ 141 (169)
T d1ihga1 75 VALSCVLNIGACKLKMSDWQGAVDSCLEALEID------------PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIA 141 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHhhcccchhhhhhhhhhhhh------------hhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 223445688999999999999999999987762 1235677888899999999999999999998763
No 32
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=96.58 E-value=0.018 Score=47.02 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=77.4
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcch---hhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQ---KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~---~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~ 215 (430)
....|..++..|+|.+|...+.+....+....+.... ........++...+.+|..+|++.+|...++++..+.
T Consensus 18 ~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~--- 94 (168)
T d1kt1a1 18 VKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD--- 94 (168)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhhhhcc---
Confidence 4478999999999999999998888766543322110 0123345566667788999999999999999998763
Q ss_pred CCchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHH
Q 014143 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (430)
Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~ 250 (430)
|.. ...+...|..+...|+|.+|..+|..+..
T Consensus 95 --p~~-~~a~~~~~~~~~~l~~~~~A~~~~~~al~ 126 (168)
T d1kt1a1 95 --SAN-EKGLYRRGEAQLLMNEFESAKGDFEKVLE 126 (168)
T ss_dssp --TTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --cch-HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 221 12334458889999999999999999865
No 33
>d1wi9a_ a.4.5.47 (A:) Hypothetical protein C20orf116 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.47 E-value=0.0033 Score=43.18 Aligned_cols=59 Identities=12% Similarity=0.224 Sum_probs=52.7
Q ss_pred HHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCCc
Q 014143 345 VLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSK 403 (430)
Q Consensus 345 ~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~~ 403 (430)
.+..+++.-+.+.+++||..|++..+++-.-|-.|..+|+|.|.||-..+.|+++...+
T Consensus 11 ~FI~~Ik~~Kvv~LedLAa~F~lktqd~i~RIq~Le~~g~ltGViDDRGKfIyIS~s~~ 69 (72)
T d1wi9a_ 11 EFINYIKKSKVVLLEDLAFQMGLRTQDAINRIQDLLTEGTLTGVIDDRGKFIYITPSGP 69 (72)
T ss_dssp HHHHHHHHCSEECHHHHHHHHCSCHHHHHHHHHHHHHHSSSCEEECTTCCEEECCCSSC
T ss_pred HHHHHHHHCCEeeHHHHHHHcCCcHHHHHHHHHHHHHCCCeeeEEcCCCCEEEEcCCCC
Confidence 44567777899999999999999999999999999999999999999999999986544
No 34
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.14 E-value=0.051 Score=45.31 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=75.8
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC--C
Q 014143 140 LKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP--H 217 (430)
Q Consensus 140 ~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~--~ 217 (430)
.++|.+|...|++++|.+.+++.... | ......+...+.++..+|++..|...+++|......-. +
T Consensus 40 ~nlG~~~~~~g~~~~A~~~~~kAl~l--------d----p~~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~ 107 (192)
T d1hh8a_ 40 FNIGCMYTILKNMTEAEKAFTRSINR--------D----KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLID 107 (192)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--------C----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEE
T ss_pred HHHHHHHHHcCCchhHHHHHHHHHHH--------h----hhhhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHH
Confidence 48899999999999999999998877 2 12356777888899999999999999999865422111 0
Q ss_pred --------chhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 218 --------PRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 218 --------~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
+...+.+..-.|.++...++|.+|...|-.+...
T Consensus 108 ~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~ 149 (192)
T d1hh8a_ 108 YKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 149 (192)
T ss_dssp CGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 1112344455688889999999999999888654
No 35
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.12 E-value=0.13 Score=46.21 Aligned_cols=122 Identities=12% Similarity=0.071 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhhcCCccc-hhhhH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHH-HHHHHh
Q 014143 32 PEGALAGFAEVVAMEPEK-AEWGF-----KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCIN-NIMDFV 104 (430)
Q Consensus 32 ~~~Ai~~~~~ii~~~~~~-~~~~~-----k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~-~il~~~ 104 (430)
+++|++.+.++++.+|+. .-|.. ..+...+..+...|++++++.+++..++.. +. +...-.-+ .++..+
T Consensus 45 ~~~al~~~~~~l~~~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~-pk---~~~~~~~~~~~~~~~ 120 (334)
T d1dcea1 45 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-PK---SYGTWHHRCWLLSRL 120 (334)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhC-CC---cHHHHHHhhHHHHHh
Confidence 589999999999999865 33432 334444567888888999999999988864 33 22211111 122222
Q ss_pred cCCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhh
Q 014143 105 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKS 165 (430)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~ 165 (430)
.. . +.+.....++.+++. +.+..-.....++.++...|.+++|...+..+...
T Consensus 121 ~~-~--~~~~a~~~~~~al~~-----~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~ 173 (334)
T d1dcea1 121 PE-P--NWARELELCARFLEA-----DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR 173 (334)
T ss_dssp SS-C--CHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT
T ss_pred cc-c--cHHHHHHHHHHHHhh-----CchhhhhhhhHHHHHHHhccccHHHHHHHHHHHHc
Confidence 21 1 122233333333331 22222222345677777788888888776655443
No 36
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.08 E-value=0.0034 Score=46.50 Aligned_cols=70 Identities=13% Similarity=-0.019 Sum_probs=54.3
Q ss_pred hhHHHHHHhhcccC-CCCHHHHHHHHHHhhcCCccc---hhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 014143 15 VSRVLCSILEKGLV-ETDPEGALAGFAEVVAMEPEK---AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84 (430)
Q Consensus 15 ~~~~~~~~~ak~~~-~~~~~~Ai~~~~~ii~~~~~~---~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~ 84 (430)
.|+..||..+.... .+++++|++.|++.++..+.. ......++.++|.+|.+.|++++++++|++.++.-
T Consensus 3 Lsaddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~ 76 (95)
T d1tjca_ 3 LTAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (95)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhC
Confidence 34556666666543 457999999999998865421 12246789999999999999999999999999874
No 37
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.99 E-value=0.019 Score=42.18 Aligned_cols=69 Identities=12% Similarity=0.105 Sum_probs=55.4
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
...+|..+++.|+|.+|...+++........+.. .....+++-..+..+...|++.+|..+++++.++.
T Consensus 8 c~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~-----~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~ 76 (95)
T d1tjca_ 8 SFELGKVAYTEADYYHTELWMEQALRQLDEGEIS-----TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (95)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC-----SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhcc-----CccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhC
Confidence 3589999999999999999999988765433211 13356777778889999999999999999998764
No 38
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=95.66 E-value=0.081 Score=46.66 Aligned_cols=121 Identities=11% Similarity=0.146 Sum_probs=79.9
Q ss_pred ccCCCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhc
Q 014143 26 GLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (430)
Q Consensus 26 ~~~~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~ 105 (430)
.+.++++++|++.|++.++.+|++ ..+...++.+++..|+|+++.+.++..+... +..... ......++..-.
T Consensus 6 aL~~G~l~eAl~~l~~al~~~P~d----~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~-P~~~~~--~~~l~~ll~a~~ 78 (264)
T d1zbpa1 6 ALSEGQLQQALELLIEAIKASPKD----ASLRSSFIELLCIDGDFERADEQLMQSIKLF-PEYLPG--ASQLRHLVKAAQ 78 (264)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-GGGHHH--HHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCcHHH--HHHHHHHHHhcc
Confidence 467789999999999999999876 6778899999999999999999999999875 532221 111122211100
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHh------hhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCC
Q 014143 106 GSASQNFSLLREFYQTTLKALEEA------KNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (430)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~e~l~~~------~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~ 169 (430)
. .+ +.+... .+..-| ...+..+..+...|++++|...+.++.......
T Consensus 79 ~------------~~---~a~~~~~~~~~~~~p~~~-~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~ 132 (264)
T d1zbpa1 79 A------------RK---DFAQGAATAKVLGENEEL-TKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 132 (264)
T ss_dssp H------------HH---HHTTSCCCEECCCSCHHH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred c------------cH---HHHHHhhhhhcccCchHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCC
Confidence 0 00 000000 000111 223356788889999999999999988876543
No 39
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.58 E-value=0.0081 Score=58.53 Aligned_cols=92 Identities=7% Similarity=-0.064 Sum_probs=51.7
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCc
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHP 218 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~~~ 218 (430)
...+|..+...|++++|.......... + --..+.....++...+++.+|..+|.+|..+.+..
T Consensus 123 ~~~lg~~~~~~~~~~~A~~~~~~al~~--------~------~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~--- 185 (497)
T d1ya0a1 123 SSQLGIISNKQTHTSAIVKPQSSSCSY--------I------CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN--- 185 (497)
T ss_dssp --------------------CCHHHHH--------H------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB---
T ss_pred HHHhHHHHHhCCCHHHHHHHHHHHhCC--------C------HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---
Confidence 346677777777777766544433222 1 11345556778889999999999999998765432
Q ss_pred hhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHH
Q 014143 219 RIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (430)
Q Consensus 219 ~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~ 250 (430)
+..+...|.++...|++.+|..+|..|..
T Consensus 186 ---~~~~~~Lg~~~~~~~~~~~A~~~y~ral~ 214 (497)
T d1ya0a1 186 ---GQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp ---SHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred ---hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 33445568889899999999999999965
No 40
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=95.35 E-value=0.052 Score=44.01 Aligned_cols=105 Identities=11% Similarity=0.040 Sum_probs=72.9
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHhhccCCC--CCcch--hhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 014143 141 KLCKIWFDMGEYGRMSKILKELHKSCQRED--GTDDQ--KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (430)
Q Consensus 141 ~La~~~~~~g~~~~A~~~l~el~~~~~~~~--~~~d~--~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~~~~~ 216 (430)
..|..++..|+|.+|.+.+++......... ..+.. ......+.++...+.++..+|++.+|-..++++..+.
T Consensus 32 ~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~---- 107 (169)
T d1ihga1 32 NIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID---- 107 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhh----
Confidence 567788888999998877766544221100 00000 0013345666777888999999999999999997653
Q ss_pred CchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHh
Q 014143 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (430)
Q Consensus 217 ~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~ 251 (430)
|. .+..+...|.++...++|..|..+|..+.+.
T Consensus 108 -p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l 140 (169)
T d1ihga1 108 -PS-NTKALYRRAQGWQGLKEYDQALADLKKAQEI 140 (169)
T ss_dssp -TT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -hh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHh
Confidence 32 2334566799999999999999999999874
No 41
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.22 E-value=0.18 Score=41.44 Aligned_cols=122 Identities=13% Similarity=0.078 Sum_probs=87.9
Q ss_pred hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014143 52 WGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN 131 (430)
Q Consensus 52 ~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ 131 (430)
+.|..+.+.+.-....|+++++.+.|..-+....+.. +...+. . .+....++.+
T Consensus 9 ~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~---------------l~~~~~--~----~w~~~~r~~l----- 62 (179)
T d2ff4a2 9 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPV---------------LDDLRD--F----QFVEPFATAL----- 62 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSST---------------TGGGTT--S----TTHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccc---------------cccCcc--h----HHHHHHHHHH-----
Confidence 4799999999999999999999999999888762221 111011 0 0111111111
Q ss_pred hhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 014143 132 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (430)
Q Consensus 132 ~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~ 211 (430)
...++.....++..+...|++++|...++.....-. .--..+...++.+...|++..|...|+.++..
T Consensus 63 ~~~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P------------~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~ 130 (179)
T d2ff4a2 63 VEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHP------------YREPLWTQLITAYYLSDRQSDALGAYRRVKTT 130 (179)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCC------------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 123445566899999999999999999999988722 12367777889999999999999999988654
No 42
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.83 E-value=0.042 Score=42.42 Aligned_cols=54 Identities=15% Similarity=0.131 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhh
Q 014143 31 DPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSA 87 (430)
Q Consensus 31 ~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~ 87 (430)
+.++|++.|++++..++.. ....++..+|.+|.+.|+++++.++|+..+..- |.
T Consensus 51 d~~~Ai~~l~~~l~~~~~~--~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~-P~ 104 (122)
T d1nzna_ 51 DIRKGIVLLEELLPKGSKE--EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE-PQ 104 (122)
T ss_dssp HHHHHHHHHHHHTTTSCHH--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT
T ss_pred HHHHHHHHHHHHHhccCCc--hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC-cC
Confidence 4568999999999877532 235689999999999999999999999999974 53
No 43
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.78 E-value=0.19 Score=38.41 Aligned_cols=94 Identities=5% Similarity=-0.100 Sum_probs=65.5
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHhhhccCCC
Q 014143 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTE---TKNNKKLKQLYQKALAIKSAIPH 217 (430)
Q Consensus 141 ~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~---~~d~~ka~~~l~~a~~~~~~~~~ 217 (430)
.|+.-+...+++++|.+.+++....-+. -.+.+..-+..+.. .+|+.+|...++++.... +.
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~------------~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~---~~ 68 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV------------SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG---SK 68 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC------------CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS---CH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC------------CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcc---CC
Confidence 5777888899999999999998887321 23455555555554 345667888887764321 11
Q ss_pred chhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHH
Q 014143 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (430)
Q Consensus 218 ~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~ 250 (430)
|. ....+...|..|...|+|.+|..+|-.+.+
T Consensus 69 ~~-~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~ 100 (122)
T d1nzna_ 69 EE-QRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 100 (122)
T ss_dssp HH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ch-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 22 233444568999999999999999999976
No 44
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.75 E-value=0.03 Score=50.62 Aligned_cols=55 Identities=11% Similarity=-0.101 Sum_probs=41.0
Q ss_pred cCCCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 014143 27 LVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84 (430)
Q Consensus 27 ~~~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~ 84 (430)
+.+.+.++|+..+.+.++.++.... -....++.++...|.++++++.+...+..-
T Consensus 120 ~~~~~~~~a~~~~~~al~~~~~~~~---~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~ 174 (334)
T d1dcea1 120 LPEPNWARELELCARFLEADERNFH---CWDYRRFVAAQAAVAPAEELAFTDSLITRN 174 (334)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTCHH---HHHHHHHHHHHTCCCHHHHHHHHHTTTTTT
T ss_pred hccccHHHHHHHHHHHHhhCchhhh---hhhhHHHHHHHhccccHHHHHHHHHHHHcC
Confidence 4456789999999999988764311 123456788888899999999988887764
No 45
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.91 E-value=1.8 Score=37.73 Aligned_cols=191 Identities=12% Similarity=0.074 Sum_probs=104.7
Q ss_pred HHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCC
Q 014143 32 PEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 111 (430)
Q Consensus 32 ~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~ 111 (430)
.++|.+.|+..++..+.+ ........+.++..+|+++.+...|...+... +. . ...+....+.......+
T Consensus 80 ~~~a~~i~~ral~~~~p~---~~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~-~~-~---~~~~w~~~~~~~~~~~~-- 149 (308)
T d2onda1 80 SDEAANIYERAISTLLKK---NMLLYFAYADYEESRMKYEKVHSIYNRLLAIE-DI-D---PTLVYIQYMKFARRAEG-- 149 (308)
T ss_dssp HHHHHHHHHHHHTTTTTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSS-SS-C---THHHHHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHHHcCCC---CHHHHHHHHHHHHhcccHHHHHHHHHHHHHHh-cC-C---hHHHHHHHHHHHHHcCC--
Confidence 467888888877643211 13344566788889999999999998887643 22 1 11122222222221111
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHH-HhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHH
Q 014143 112 FSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWF-DMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQ 190 (430)
Q Consensus 112 ~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~-~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~ 190 (430)
.+.....++.+++... ... .+....|.+.. ..|+.+.|.+++......+.. ..++...-++
T Consensus 150 ~~~ar~i~~~al~~~~--~~~----~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~------------~~~~w~~y~~ 211 (308)
T d2onda1 150 IKSGRMIFKKAREDAR--TRH----HVYVTAALMEYYCSKDKSVAFKIFELGLKKYGD------------IPEYVLAYID 211 (308)
T ss_dssp HHHHHHHHHHHHTSTT--CCT----HHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTT------------CHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCC--CcH----HHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhh------------hHHHHHHHHH
Confidence 2233344443332100 111 22234555543 458899999999988887532 1345555567
Q ss_pred HHHhhcCHHHHHHHHHHHHhhhccCCCchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhh
Q 014143 191 MYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (430)
Q Consensus 191 l~~~~~d~~ka~~~l~~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~ 252 (430)
+....||+.+|+.++++|.+... .+|.-...++..-..+-...|+...+...+-.+.+.|
T Consensus 212 ~~~~~g~~~~aR~~fe~ai~~~~--~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~~~~ 271 (308)
T d2onda1 212 YLSHLNEDNNTRVLFERVLTSGS--LPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAF 271 (308)
T ss_dssp HHHTTCCHHHHHHHHHHHHHSSS--SCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred HHHHcCChHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 78889999999999998864321 1333223343333333334456666555444444434
No 46
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.54 E-value=0.09 Score=40.57 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 014143 30 TDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84 (430)
Q Consensus 30 ~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~ 84 (430)
.+.++||..|++++..++++ ...++..++-.|++.|+|+++..++..+++.-
T Consensus 52 ~d~~~gI~lLe~~~~~~p~~---~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ie 103 (124)
T d2pqrb1 52 NDERLGVKILTDIYKEAESR---RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCchh---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHccC
Confidence 35689999999999776543 35689999999999999999999999999864
No 47
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.23 E-value=0.48 Score=42.21 Aligned_cols=132 Identities=6% Similarity=-0.019 Sum_probs=97.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhh
Q 014143 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (430)
Q Consensus 53 ~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ 132 (430)
-..+...++.++.+.+.++++++.+.+.+... |+ +.
T Consensus 42 ~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~ln-----------------------P~-~~-------------------- 77 (315)
T d2h6fa1 42 FRDVYDYFRAVLQRDERSERAFKLTRDAIELN-----------------------AA-NY-------------------- 77 (315)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC-----------------------TT-CH--------------------
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHC-----------------------CC-Ch--------------------
Confidence 35678889999999999999999999888864 33 11
Q ss_pred hhHHHHhHHHHHHHHHhc-cHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 014143 133 RLWFKTNLKLCKIWFDMG-EYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (430)
Q Consensus 133 kl~~r~~~~La~~~~~~g-~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~ 211 (430)
......|.++...| ++++|...+..+...-+ .....+.....++..+|++.+|...++++...
T Consensus 78 ----~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p------------~~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~ 141 (315)
T d2h6fa1 78 ----TVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP------------KNYQVWHHRRVLVEWLRDPSQELEFIADILNQ 141 (315)
T ss_dssp ----HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH------------hhhhHHHHHhHHHHhhccHHHHHHHHhhhhhh
Confidence 00125566666665 69999999999877732 12456666677888999999999999998765
Q ss_pred hccCCCchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHH
Q 014143 212 KSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (430)
Q Consensus 212 ~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~ 250 (430)
. |+- ...+...|.++...++|.+|..+|-.+.+
T Consensus 142 d-----p~n-~~a~~~~~~~~~~~~~~~~Al~~~~~al~ 174 (315)
T d2h6fa1 142 D-----AKN-YHAWQHRQWVIQEFKLWDNELQYVDQLLK 174 (315)
T ss_dssp C-----TTC-HHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred h-----hcc-hHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3 321 22444557788888999999999988865
No 48
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=93.04 E-value=0.085 Score=35.50 Aligned_cols=46 Identities=15% Similarity=0.257 Sum_probs=38.8
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeE---eeec
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDG---HIDQ 391 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g---~IDq 391 (430)
|+...+.-.++++.+||+.+|+|+..|..-+.+|..+|.|.| .||.
T Consensus 10 IL~~L~~n~r~s~~~iA~~lgis~~tv~~Ri~~L~~~giI~~~~~~id~ 58 (63)
T d2cfxa1 10 IIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQ 58 (63)
T ss_dssp HHHHHHHCSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEEECT
T ss_pred HHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeeEEEEECH
Confidence 344555558999999999999999999999999999999965 5554
No 49
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.77 E-value=0.29 Score=35.85 Aligned_cols=77 Identities=10% Similarity=0.120 Sum_probs=57.0
Q ss_pred HHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCCccchHHHHHHHHHHHHHHHHHHH
Q 014143 347 LKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTV 425 (430)
Q Consensus 347 ~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~~~~~~~~~l~~w~~~v~~l~~~v 425 (430)
+.++...-.+++++||+.++++..-+-..+.+|...|.|..+-|..++...+..-.+. -.+.+..|...++++.+.+
T Consensus 22 L~~L~~~~~~~~~eLa~~l~is~~~vs~~l~~L~~~glV~~~~~~~d~r~~~~~LT~~--G~~~~~~~~~~~~~~~~~l 98 (100)
T d1ub9a_ 22 MIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDF--GMEEAKRFLSSLKAVIDGL 98 (100)
T ss_dssp HHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCeeHHHHHHHHhhccccccHHHHHHhhhceeEEEEcCcCCccccccCCHH--HHHHHHHHHHHHHHHHHhh
Confidence 3444334568999999999999999999999999999999888877775444433221 2456667777777776654
No 50
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=92.01 E-value=0.11 Score=34.85 Aligned_cols=42 Identities=14% Similarity=0.223 Sum_probs=36.7
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeE
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDG 387 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g 387 (430)
|+..++--.++++.+||+.+|+|...|..-+-+|..+|.|.+
T Consensus 10 IL~~L~~~~r~s~~eiA~~l~ls~~~v~~Ri~rL~~~GiI~~ 51 (63)
T d2cg4a1 10 ILEALMGNARTAYAELAKQFGVSPETIHVRVEKMKQAGIITG 51 (63)
T ss_dssp HHHHHHHCTTSCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEe
Confidence 445555558999999999999999999999999999999964
No 51
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.63 E-value=3.8 Score=35.50 Aligned_cols=160 Identities=11% Similarity=0.093 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCC
Q 014143 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (430)
Q Consensus 29 ~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~ 108 (430)
.+++++|...|.+.++..+.+ ...+....+.++.+.|+.+.+.+.|...++.. +.......... .+....
T Consensus 112 ~~~~~~a~~i~~~~l~~~~~~---~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~-~~~~~~~~~~a---~~e~~~--- 181 (308)
T d2onda1 112 RMKYEKVHSIYNRLLAIEDID---PTLVYIQYMKFARRAEGIKSGRMIFKKAREDA-RTRHHVYVTAA---LMEYYC--- 181 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSSC---THHHHHHHHHHHHHHHCHHHHHHHHHHHHTST-TCCTHHHHHHH---HHHHHT---
T ss_pred cccHHHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCcHHHHHHHH---HHHHHh---
Confidence 456899999999998876543 12445677888999999999999998887764 32222111111 122211
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHH
Q 014143 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (430)
Q Consensus 109 ~~~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~ 188 (430)
..+.+.....++.+++..- .+..+ -...+++....|+++.|..+++.....+...+ + ....++..-
T Consensus 182 ~~~~~~a~~i~e~~l~~~p--~~~~~----w~~y~~~~~~~g~~~~aR~~fe~ai~~~~~~~---~-----~~~~iw~~~ 247 (308)
T d2onda1 182 SKDKSVAFKIFELGLKKYG--DIPEY----VLAYIDYLSHLNEDNNTRVLFERVLTSGSLPP---E-----KSGEIWARF 247 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHT--TCHHH----HHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCG---G-----GCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhhh--hhHHH----HHHHHHHHHHcCChHHHHHHHHHHHHhCCCCh---H-----HHHHHHHHH
Confidence 1124455666776665311 12223 34778999999999999999999877764321 1 112333344
Q ss_pred HHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 189 IQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 189 ~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
+++-...||...++.++.++...-
T Consensus 248 ~~fE~~~G~~~~~~~~~~r~~~~~ 271 (308)
T d2onda1 248 LAFESNIGDLASILKVEKRRFTAF 271 (308)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHC
Confidence 456667799999999988876543
No 52
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.98 E-value=0.13 Score=34.15 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=36.0
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeE
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDG 387 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g 387 (430)
|+..++.-.++++.+||+.+|+|+..|..-+-+|..+|.|.+
T Consensus 8 Il~~L~~n~r~s~~eiA~~l~ls~~~v~~Ri~~L~~~giI~~ 49 (60)
T d2cyya1 8 IIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKK 49 (60)
T ss_dssp HHHHHHHCTTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEe
Confidence 344444458999999999999999999999999999998863
No 53
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.93 E-value=0.13 Score=34.16 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=35.9
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
|+.+++.-.++++..||+.+|+|++.|-.-+-+|..+|.|.
T Consensus 8 Il~~L~~n~r~s~~~lA~~~gls~~~v~~Ri~~L~~~giI~ 48 (60)
T d1i1ga1 8 ILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIE 48 (60)
T ss_dssp HHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeE
Confidence 44455555899999999999999999999999999999885
No 54
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.47 E-value=1.2 Score=32.92 Aligned_cols=57 Identities=18% Similarity=0.107 Sum_probs=47.3
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCCccchHHH
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYT 409 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~~~~~~~~ 409 (430)
...++..+||+.+|++...|-..|.+|...|.+.-.+++.+|.-....+.++....+
T Consensus 32 ~g~~t~~eia~~~~i~~~~v~~~l~~L~~~GlV~r~~~~~~~r~~~~~a~~~~e~l~ 88 (109)
T d1sfxa_ 32 RGGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKVLK 88 (109)
T ss_dssp HCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEEEEEECCHHHHHH
T ss_pred cCCCCHHHHHHHhCCCcchHHHHHHHHHhCCCEEEEeccCCCccccccCCCHHHHHH
Confidence 468899999999999999999999999999999988888888776666555443333
No 55
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.26 E-value=3.6 Score=38.72 Aligned_cols=152 Identities=7% Similarity=-0.006 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCC
Q 014143 31 DPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQ 110 (430)
Q Consensus 31 ~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~ 110 (430)
.+..+++.++...+............ ...+.++...|.|+.+++.+......- +.... ....+........+
T Consensus 64 ~y~~~ie~~r~~~k~~~~~~~~~~~~-~~~~~l~~a~~~Y~~ai~~l~~~~~l~-~~~~~-----~~~~lg~~~~~~~~- 135 (497)
T d1ya0a1 64 AFKNQITTLQGQAKNRANPNRSEVQA-NLSLFLEAASGFYTQLLQELCTVFNVD-LPCRV-----KSSQLGIISNKQTH- 135 (497)
T ss_dssp HTHHHHHHHHHHHSCSSCTTTTHHHH-HHHHHHHHHHHHHHHHHHHHTC-------------------------------
T ss_pred HHHHHHHHHHHhcccccCccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCC-hhhHH-----HHHHhHHHHHhCCC-
Confidence 46788999998877654221111111 123456667888999998877665542 21100 01111111111000
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHH
Q 014143 111 NFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQ 190 (430)
Q Consensus 111 ~~~~~~~~~~~~~e~l~~~~~~kl~~r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~ 190 (430)
.+.....+... ++.. .-++...||.++...|+|++|...+.+....-++ + ...|...+.
T Consensus 136 -~~~A~~~~~~a---l~~~-----~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-----~-------~~~~~~Lg~ 194 (497)
T d1ya0a1 136 -TSAIVKPQSSS---CSYI-----CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-----N-------GQPYNQLAI 194 (497)
T ss_dssp --------CCHH---HHHH-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----B-------SHHHHHHHH
T ss_pred -HHHHHHHHHHH---hCCC-----HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-----c-------hHHHHHHHH
Confidence 00011111111 1100 1145678999999999999999999999888432 1 244556667
Q ss_pred HHHhhcCHHHHHHHHHHHHhh
Q 014143 191 MYTETKNNKKLKQLYQKALAI 211 (430)
Q Consensus 191 l~~~~~d~~ka~~~l~~a~~~ 211 (430)
++...||+..|..+|.+|..+
T Consensus 195 ~~~~~~~~~~A~~~y~ral~~ 215 (497)
T d1ya0a1 195 LASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHcCCHHHHHHHHHHHHhC
Confidence 888899999999999888643
No 56
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=86.83 E-value=0.57 Score=31.86 Aligned_cols=41 Identities=24% Similarity=0.222 Sum_probs=36.1
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
+++++...-.+|-.+||+.+|++..-|-..+.+|+.+|.|.
T Consensus 11 Il~~l~~~g~~sr~eLa~~~glS~~Tv~~~l~~L~~~Glv~ 51 (71)
T d1z05a1 11 VYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIH 51 (71)
T ss_dssp HHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHcCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
Confidence 44455567789999999999999999999999999999985
No 57
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.13 E-value=0.37 Score=32.82 Aligned_cols=39 Identities=13% Similarity=0.186 Sum_probs=35.8
Q ss_pred cccchhhHHhHh-CCChHHHHHHHHHhhhcCceeEeeecc
Q 014143 354 TRIRIPFISKEL-NVPEKDVEQLLVSLILDNRIDGHIDQV 392 (430)
Q Consensus 354 ~~I~l~~lA~~l-~l~~~evE~~l~~lI~~g~i~g~IDq~ 392 (430)
.=|++.+|++.| ++|+.+|..-+-.|+.+|.|.-.||.-
T Consensus 22 eGi~~~el~~~l~~~~~~~i~~aid~L~~eG~IYsTiDdd 61 (69)
T d1dpua_ 22 EGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDD 61 (69)
T ss_dssp TTEEHHHHHHHSTTSCHHHHHHHHHHHHHTTSEEECSSTT
T ss_pred cCcCHHHHHHHccCCCHHHHHHHHHHHHhCCceecccccc
Confidence 459999999999 799999999999999999999999863
No 58
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=84.95 E-value=0.87 Score=30.85 Aligned_cols=42 Identities=7% Similarity=0.186 Sum_probs=37.2
Q ss_pred HHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 345 VLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 345 ~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
.+++++.....+|=.+||+.+|++..-|-..+.+|+.+|.|.
T Consensus 9 ~Il~~i~~~g~~sr~eLa~~~gLS~~Tvs~iv~~L~~~glv~ 50 (70)
T d1z6ra1 9 AVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLVQ 50 (70)
T ss_dssp HHHHHHHSSCSCCHHHHHHHTTCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHcCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEE
Confidence 345556678899999999999999999999999999999985
No 59
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.18 E-value=8.5 Score=30.56 Aligned_cols=110 Identities=6% Similarity=-0.104 Sum_probs=76.1
Q ss_pred HHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchh----------hcchHHHHHHHHHHHHHhhcCHHHHHHHHH
Q 014143 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK----------KGSQLLEVYAIEIQMYTETKNNKKLKQLYQ 206 (430)
Q Consensus 137 r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~----------~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~ 206 (430)
+.....|.-..+.|++++|...+........+....+... -....++.+...+..+...|++.+|...++
T Consensus 12 ~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~~~~ 91 (179)
T d2ff4a2 12 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 91 (179)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 4455788888999999999999998887654332111000 012234555666778999999999999999
Q ss_pred HHHhhhccCCCchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhh
Q 014143 207 KALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (430)
Q Consensus 207 ~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~ 252 (430)
++.... |. ....+...+..+...|++.+|...|-.+-..+
T Consensus 92 ~al~~~-----P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L 131 (179)
T d2ff4a2 92 ALTFEH-----PY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTL 131 (179)
T ss_dssp HHHHHS-----TT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhC-----Cc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 887543 21 22345555778888999999999888875544
No 60
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=83.12 E-value=3.5 Score=31.22 Aligned_cols=48 Identities=10% Similarity=0.040 Sum_probs=42.0
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEccC
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGDR 401 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~~ 401 (430)
..++.+.||+.++++..-+-..|.+|+..|.|.-..|..++ .|.+++.
T Consensus 42 ~~~t~~~la~~~~~~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~i~lT~~ 92 (137)
T d2fbha1 42 DSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPK 92 (137)
T ss_dssp SCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTT
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHHHHHcCCccccCCCCCCCchhhhcCHH
Confidence 36899999999999999999999999999999988888876 5556543
No 61
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=79.91 E-value=1.6 Score=30.74 Aligned_cols=63 Identities=8% Similarity=0.206 Sum_probs=49.4
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCCccchHHHHHHHHHHHHHHH
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSL 421 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~~~~~~~~~l~~w~~~v~~l 421 (430)
..|+..+||+.++++..-+-..|.+|..+|.|.=..|.-.-.+.+++. -.+.+.++...+..+
T Consensus 20 ~~lt~~eLa~~l~i~~~~vs~~l~~Le~~GlV~r~~D~R~~~i~LT~~-----G~~~l~~~~~~~~rl 82 (85)
T d3ctaa1 20 AYLTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEK-----GLDVLYTEFADLSRI 82 (85)
T ss_dssp EECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHH-----HHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeeecccccccceECHH-----HHHHHHHHHHHHHHH
Confidence 369999999999999999999999999999998777765556666553 245666666666554
No 62
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=78.14 E-value=12 Score=28.31 Aligned_cols=39 Identities=10% Similarity=0.073 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCCHHHHH
Q 014143 32 PEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMM 74 (430)
Q Consensus 32 ~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~~~~l~ 74 (430)
+++|++.|+++++.+|++ ..++..+|.+|...+++....
T Consensus 13 fe~A~~~~e~al~~~P~~----~~~~~~~g~~l~~~~~~~~~~ 51 (145)
T d1zu2a1 13 FEQIRQDAENTYKSNPLD----ADNLTRWGGVLLELSQFHSIS 51 (145)
T ss_dssp HHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHhhCCcc----hHHHHHHHHHHHHhhhhhhhh
Confidence 689999999999999865 567788888887666554433
No 63
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=77.77 E-value=5.4 Score=28.92 Aligned_cols=53 Identities=13% Similarity=0.002 Sum_probs=38.1
Q ss_pred hcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccC---CEEEEccC
Q 014143 349 LIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVN---RLLERGDR 401 (430)
Q Consensus 349 i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~---g~v~~~~~ 401 (430)
+.+.-..++.+.||+.+|++..-|-..|.+|...|.|.=.-+..+ ..++++..
T Consensus 30 L~~~~~~~t~~eLa~~~~i~~~tvs~~l~~L~~~GlV~r~~~~~d~rg~~~~~~~~ 85 (109)
T d2d1ha1 30 MVEIEKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTEGKKIGRPKYYYSI 85 (109)
T ss_dssp HHHHCSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC-------CCEEEEE
T ss_pred HHHcCCCCCHHHHHHHHCccHhHHHHHHHHHHHCCCEEEeecCCCCCceeEEEeeC
Confidence 333334689999999999999999999999999999964444433 33555544
No 64
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=77.12 E-value=2.4 Score=27.97 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=31.8
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
|.--++.+||+.+|+++.+++.++-.++..|.+-
T Consensus 21 ~~PP~vrdl~~~l~~~e~~~~~lL~~l~~~G~lv 54 (64)
T d1lvaa3 21 WQPPSFKEVAGSFNLDPSELEELLHYLVREGVLV 54 (64)
T ss_dssp TSCCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCCcHHHHHHHhCCCHHHHHHHHHHHHHCCCEE
Confidence 6888999999999999999999999999999874
No 65
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=76.73 E-value=6.4 Score=29.80 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=41.4
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEcc
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGD 400 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~ 400 (430)
-.++..+||+.++++..-+-..|.+|+..|.|.-.-|..++ .|.+++
T Consensus 45 ~~~t~~~La~~l~i~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~l~lT~ 94 (140)
T d2etha1 45 GPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTE 94 (140)
T ss_dssp CCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECH
T ss_pred CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeeeecccccchhhhhcCH
Confidence 46899999999999999999999999999999988888886 555554
No 66
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=76.63 E-value=1.7 Score=33.64 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHHhCC
Q 014143 31 DPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGK 69 (430)
Q Consensus 31 ~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~~~~ 69 (430)
.+++|++.|++.++.+|++ ..++..+|.+|...|+
T Consensus 56 ~~~~Ai~~~~kAl~l~P~~----~~a~~~lG~~y~~~g~ 90 (145)
T d1zu2a1 56 MIQEAITKFEEALLIDPKK----DEAVWCIGNAYTSFAF 90 (145)
T ss_dssp HHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchh----hHHHhhHHHHHHHccc
Confidence 3678999999999998865 5677889999887764
No 67
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=76.30 E-value=5 Score=27.33 Aligned_cols=61 Identities=10% Similarity=0.119 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhccccccc-chhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEc
Q 014143 337 LLKNVRTQVLLKLIKPYTRI-RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERG 399 (430)
Q Consensus 337 L~~~i~~~~l~~i~~~Y~~I-~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~ 399 (430)
+.+.|+..-...-..|=.++ +...||+.++++..-|..-+..|..+|.|..+ +..|+.+..
T Consensus 3 i~~~i~~~I~~g~l~~G~~LPse~~La~~~~vSr~tvr~Al~~L~~~Gli~~~--~g~G~~V~~ 64 (78)
T d3bwga1 3 IATEIETYIEEHQLQQGDKLPVLETLMAQFEVSKSTITKSLELLEQKGAIFQV--RGSGIFVRK 64 (78)
T ss_dssp HHHHHHHHHHHTTCCTTCBCCCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEE--TTTEEEECC
T ss_pred HHHHHHHHHHcCCCCCcCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE--cCcEEEEcc
Confidence 34444444445556788899 89999999999999999999999999999865 555666543
No 68
>d1rz4a1 a.4.5.53 (A:132-216) Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.75 E-value=2 Score=30.25 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcccccccchhhHHhHhCCC-hHHHHHHHHH
Q 014143 337 LLKNVRTQVLLKLIKPYTRIRIPFISKELNVP-EKDVEQLLVS 378 (430)
Q Consensus 337 L~~~i~~~~l~~i~~~Y~~I~l~~lA~~l~l~-~~evE~~l~~ 378 (430)
|.+.||......+...|++|+-+.|++.||++ ..+++.++.+
T Consensus 3 FedsIR~~i~~vv~iTyq~I~~~~L~e~LG~~~d~~L~~~i~~ 45 (85)
T d1rz4a1 3 FEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSK 45 (85)
T ss_dssp HHHHHHHHHHHHHHHHCSEECHHHHHHHTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhheeeeeeEEcHHHHHHHhCCCCHHHHHHHHHH
Confidence 34556666666677889999999999999874 6678888765
No 69
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=73.21 E-value=8.5 Score=28.86 Aligned_cols=47 Identities=6% Similarity=0.051 Sum_probs=41.2
Q ss_pred cccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEE
Q 014143 350 IKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLL 396 (430)
Q Consensus 350 ~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v 396 (430)
+...-.++..+||+.++++..-+-..|-+|...|.|.-.-|..++..
T Consensus 39 l~~~~~~t~~~la~~~~i~~~~vs~~i~~L~~~gli~r~~~~~D~R~ 85 (136)
T d2fbia1 39 LRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRR 85 (136)
T ss_dssp HHHHCSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEE
T ss_pred HHHcCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeecCccCch
Confidence 33455799999999999999999999999999999998888888733
No 70
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=71.36 E-value=3 Score=27.24 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=31.3
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
.-..++..+||+.+|++..-|-..+-+|...|.+.
T Consensus 18 ~~~~v~~~~iA~~L~vs~~SVs~mikrL~~~GlV~ 52 (61)
T d2ev0a1 18 EKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLI 52 (61)
T ss_dssp HHSSCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred cCCCccHHHHHHHhCCCchhHHHHHHHHHHCCCEE
Confidence 33578999999999999999999999999999874
No 71
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=70.38 E-value=21 Score=30.14 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=43.7
Q ss_pred HHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 014143 144 KIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (430)
Q Consensus 144 ~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~ 211 (430)
+-.+..|++++|...+++..+...+ ..+.+..-++++...|++.+|...++.+...
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~------------d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l 59 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPK------------DASLRSSFIELLCIDGDFERADEQLMQSIKL 59 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTT------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCC------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3456789999999999998887331 2355666678899999999999999988654
No 72
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=68.54 E-value=6 Score=26.46 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=31.0
Q ss_pred cccchhhHHhHhCC-ChHHHHHHHHHhhhcCceeEe
Q 014143 354 TRIRIPFISKELNV-PEKDVEQLLVSLILDNRIDGH 388 (430)
Q Consensus 354 ~~I~l~~lA~~l~l-~~~evE~~l~~lI~~g~i~g~ 388 (430)
...++.+||+.+|+ |..-|-..|..|...|.|.=.
T Consensus 23 ~~Ps~rei~~~~g~~S~stv~~~l~~Le~kG~I~r~ 58 (71)
T d1jhfa1 23 MPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIV 58 (71)
T ss_dssp SCCCHHHHHHHTTCSSHHHHHHHHHHHHHTTSEEEC
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHCcCeecC
Confidence 46899999999999 788999999999999988643
No 73
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=68.41 E-value=10 Score=28.68 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=41.2
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCE---EEEcc
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRL---LERGD 400 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~---v~~~~ 400 (430)
.+..++.++||+.++++..-+-..+-+|...|.|.=..|..++. |.+++
T Consensus 46 ~~~~~t~~~la~~~~i~~~~vs~~l~~L~~~glv~r~~~~~D~R~~~v~lT~ 97 (143)
T d1s3ja_ 46 KHGSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTD 97 (143)
T ss_dssp HHSEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECH
T ss_pred HCCCCCHHHHHHHHCcCHHHHHHHHHHHHHhhhheeeeecCCCCceEEEECH
Confidence 34568999999999999999999999999999998777777664 55554
No 74
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=68.28 E-value=7.8 Score=25.60 Aligned_cols=61 Identities=18% Similarity=0.236 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEE
Q 014143 335 EDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLE 397 (430)
Q Consensus 335 ~~L~~~i~~~~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~ 397 (430)
..+.+.|++.-+..-..|=.+++-..||+.+|++..-|..-+..|..+|.|..+ +..|+.+
T Consensus 5 ~qi~~~l~~~I~~g~~~~G~~l~~~~La~~~~vSr~tvr~Al~~L~~~Gli~~~--~~~G~~V 65 (69)
T d2hs5a1 5 TRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHE--LNRGVFV 65 (69)
T ss_dssp HHHHHHHHHHHHHTSSCTTCEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE--TTTEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcCccCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE--cCCEEEe
Confidence 445566665555555677788899999999999999999999999999999765 3344443
No 75
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=68.18 E-value=4.5 Score=26.53 Aligned_cols=38 Identities=16% Similarity=0.064 Sum_probs=32.9
Q ss_pred hcccccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 349 LIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 349 i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
+.+--..++..+||+.+|+++.-|-..+-+|-..|.|.
T Consensus 17 L~~~~~~v~~~~iA~~L~vs~~SVt~mvkrL~~~Glv~ 54 (63)
T d2isya1 17 LEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLR 54 (63)
T ss_dssp HHHTTCCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHhcCCCCcHHHHHHHhCCCchhHHHHHHHHHHCCCEE
Confidence 33444578999999999999999999999999999885
No 76
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=67.58 E-value=12 Score=28.44 Aligned_cols=47 Identities=15% Similarity=0.079 Sum_probs=41.6
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEcc
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGD 400 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~ 400 (430)
--++.+.||+.++++..-+-..|.+|...|.|.-.-|..++ .|.+++
T Consensus 42 ~~~t~~~la~~l~i~~~tvs~~l~~L~~~glI~r~~~~~D~R~~~l~LT~ 91 (144)
T d1lj9a_ 42 PGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATE 91 (144)
T ss_dssp TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECH
T ss_pred CCCCHHHHHHHHCccHhhHHHHHHHHHhhhcccccCCCCCCCccccccCH
Confidence 46899999999999999999999999999999988888887 555554
No 77
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=66.69 E-value=16 Score=27.36 Aligned_cols=44 Identities=5% Similarity=0.056 Sum_probs=39.5
Q ss_pred ccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC
Q 014143 351 KPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR 394 (430)
Q Consensus 351 ~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g 394 (430)
..+.-++.++||+.++++..-|-..|-+|...|.|.-.-|..++
T Consensus 46 ~~~~~~t~~~la~~l~~~~~~vsr~l~~L~~~G~v~r~~~~~D~ 89 (141)
T d1lnwa_ 46 DEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQ 89 (141)
T ss_dssp HSSTTCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSSS
T ss_pred HHCCCCCHHHHHHHHCccHhHHHHHHHHHHHhhceeeeccCCCC
Confidence 34567899999999999999999999999999999888887776
No 78
>d1ylfa1 a.4.5.55 (A:5-142) Hypothetical protein BC1842 {Bacillus cereus [TaxId: 1396]}
Probab=66.13 E-value=9.2 Score=28.94 Aligned_cols=52 Identities=10% Similarity=0.080 Sum_probs=39.4
Q ss_pred HHHHHhc-ccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEE
Q 014143 344 QVLLKLI-KPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLL 396 (430)
Q Consensus 344 ~~l~~i~-~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v 396 (430)
|.+.-+. .|=..++...||+.+++|+..+++.+.+|...|.+.+.=-. .|..
T Consensus 11 ~~L~~la~~~~~~vss~~IA~~~~i~~~~l~kil~~L~~aGlv~S~rG~-GG~~ 63 (138)
T d1ylfa1 11 HILSILKNNPSSLCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRGP-GGAG 63 (138)
T ss_dssp HHHHHHHHSCGGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC----CCEE
T ss_pred HHHHHHHhCCCCcCcHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeecCC-CCce
Confidence 3444443 34467999999999999999999999999999999876553 5543
No 79
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=65.76 E-value=32 Score=27.96 Aligned_cols=90 Identities=14% Similarity=0.110 Sum_probs=56.8
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHhhhcc
Q 014143 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTE----TKNNKKLKQLYQKALAIKSA 214 (430)
Q Consensus 139 ~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~----~~d~~ka~~~l~~a~~~~~~ 214 (430)
.+.||..++..||+.+|.+++++.... | + .+.+.....+|.. .+|+.+|..++..+....
T Consensus 5 ~~~lG~~~~~~~d~~~A~~~~~kAa~~-----g--~-------~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~-- 68 (265)
T d1ouva_ 5 LVGLGAKSYKEKDFTQAKKYFEKACDL-----K--E-------NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-- 68 (265)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT-----T--C-------HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHC-----C--C-------HHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--
Confidence 458999999999999999999988654 1 2 1222233455554 578999999988875322
Q ss_pred CCCchhHHHHHHhhhHhh----hhhhcHHHHHHHHHHHHH
Q 014143 215 IPHPRIMGIIRECGGKMH----MAERQWADAATDFFEAFK 250 (430)
Q Consensus 215 ~~~~~~~~~~~~~~g~~~----~~~~~y~~A~~~f~ea~~ 250 (430)
+|.-+..+ |.++ ....++..|...|..+.+
T Consensus 69 --~~~a~~~l----~~~~~~~~~~~~~~~~a~~~~~~a~~ 102 (265)
T d1ouva_ 69 --YSNGCHLL----GNLYYSGQGVSQNTNKALQYYSKACD 102 (265)
T ss_dssp --CHHHHHHH----HHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred --ccchhhcc----ccccccccccchhhHHHHHHHhhhhh
Confidence 22222111 2222 235677888777777643
No 80
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=65.71 E-value=15 Score=27.41 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=37.5
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEccC
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGDR 401 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~~ 401 (430)
..++..+||+.++++..-+-..|.+|...|.|.-.-|..++ .|.+++.
T Consensus 45 ~~~t~~~la~~l~i~~~~vs~~l~~L~~~glI~~~~~~~D~R~~~l~lT~~ 95 (140)
T d3deua1 45 PDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEK 95 (140)
T ss_dssp SSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGG
T ss_pred CCccHHHHHHHHCCCHhHHHHHHHHHHhCCCEEecccCCCCCceeeEECHH
Confidence 36999999999999999999999999999999888888877 6666654
No 81
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=65.24 E-value=3.9 Score=29.60 Aligned_cols=57 Identities=11% Similarity=0.134 Sum_probs=44.4
Q ss_pred ccchhhHHhHhCCC-hHHHHHHHHHhhhcCceeEeeeccCCEEEEccCCccchHHHHHHHHH
Q 014143 355 RIRIPFISKELNVP-EKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWN 415 (430)
Q Consensus 355 ~I~l~~lA~~l~l~-~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~~~~~~~~~l~~w~ 415 (430)
++|=++||.++|++ -+-|-+.+.+|-.+|.|. ...+.+.+.+.+.....-..+.+|-
T Consensus 31 ~lTqeeLA~~lG~s~ReTVsR~L~~L~~~GlI~----~~~~~i~I~D~~~L~~~A~~~de~~ 88 (100)
T d2bgca1 31 NLTMQELGYSSGIAHSSAVSRIISKLKQEKVIV----YKNSCFYVQNLDYLKRYAPKLDEWF 88 (100)
T ss_dssp CCCHHHHHHHTTCCCHHHHHHHHHHHHHTTSEE----EETTEEEESCHHHHHHHCHHHHHHH
T ss_pred ccCHHHHHHHhCCchHHHHHHHHHHHHHCCCEE----EcCCEEEEeCHHHHHHHhcccchhh
Confidence 57889999999997 578999999999998765 3578889988765444455666665
No 82
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=65.22 E-value=7.5 Score=29.65 Aligned_cols=45 Identities=18% Similarity=0.022 Sum_probs=38.3
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEE
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLER 398 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~ 398 (430)
..+++.+||+.+|++..-|-..|-+|...|.+.=.-+..++.-.+
T Consensus 40 ~plt~~ela~~l~vsk~~vs~~l~~L~~~GlV~r~~~~~drr~~~ 84 (151)
T d1ku9a_ 40 KPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGERKNYY 84 (151)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTTCSSCEE
T ss_pred CCcCHHHHHHHhCCCcchHHHHHHHHHHCCCEEEEEcCCCCceeE
Confidence 459999999999999999999999999999998776666654333
No 83
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=64.44 E-value=11 Score=28.02 Aligned_cols=45 Identities=4% Similarity=-0.086 Sum_probs=39.8
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEE
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLL 396 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v 396 (430)
+-..+++.+||+.++++...+-..|.+|...|.|.=.-|..++..
T Consensus 46 ~~~~~~~~~ia~~l~~~~~~vs~~v~~L~~~glV~r~~~~~D~R~ 90 (125)
T d1p4xa2 46 NKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERK 90 (125)
T ss_dssp TTCCEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTC
T ss_pred cCCCccHHHHHHHHCCCcchHHHHHHHHHhccCEeeeecCCCCCe
Confidence 345799999999999999999999999999999988888887733
No 84
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=63.21 E-value=8 Score=26.02 Aligned_cols=50 Identities=14% Similarity=0.135 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhccccccc-chhhHHhHhCCChHHHHHHHHHhhhcCceeEe
Q 014143 339 KNVRTQVLLKLIKPYTRI-RIPFISKELNVPEKDVEQLLVSLILDNRIDGH 388 (430)
Q Consensus 339 ~~i~~~~l~~i~~~Y~~I-~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~ 388 (430)
+.|+..-+..-..|=.++ +...||+.++++..-|..-+..|..+|.|.-+
T Consensus 10 e~i~~~I~~g~~~~G~~LPs~~eLa~~~~vSr~tvr~Al~~L~~~G~i~~~ 60 (74)
T d1hw1a1 10 EYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQ 60 (74)
T ss_dssp HHHHHHHHTTSSCTTSBCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHcCCCCCcCCCccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE
Confidence 334433334445677999 79999999999999999999999999998755
No 85
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.89 E-value=26 Score=25.97 Aligned_cols=66 Identities=11% Similarity=0.007 Sum_probs=45.3
Q ss_pred HHHhHHHHHHHHHh---ccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 014143 136 FKTNLKLCKIWFDM---GEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (430)
Q Consensus 136 ~r~~~~La~~~~~~---g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~~a~~~~ 212 (430)
..+..+.|--+... ++.+++..+|.++..... ...-+.+-..+-.|..+||+.+|+.+++++..+.
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p-----------~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ie 103 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAE-----------SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 103 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCG-----------GGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCc-----------hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccC
Confidence 34455666555543 567789999999886521 1123444455567889999999999999988763
No 86
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=62.69 E-value=8 Score=24.57 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHhcc-cccccchhhHHhHhCCChHHHHHHH
Q 014143 332 NYIEDLLKNVRTQVLLKLIK-PYTRIRIPFISKELNVPEKDVEQLL 376 (430)
Q Consensus 332 ~~~~~L~~~i~~~~l~~i~~-~Y~~I~l~~lA~~l~l~~~evE~~l 376 (430)
.|+..+..++. +...++.. .=+.-|.++||+.+|+|+++|...+
T Consensus 8 r~~~e~~~ki~-~~~~~l~q~lgRePT~~EiA~~l~~~~e~V~~~l 52 (57)
T d1l0oc_ 8 RSLKEMGNKIR-KAKDELSKTRGRAPTVTEIADHLGISPEDVVLAQ 52 (57)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHTSCCBHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHcCCCCCHHHHHHHHCcCHHHHHHHH
Confidence 35555555553 22233332 2367899999999999999997544
No 87
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=60.35 E-value=6.7 Score=29.54 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=42.7
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEccC
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGDR 401 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~~ 401 (430)
....++.+.||+.++++...+-..+.+|+..|.|.-+-|..++ +|.+++.
T Consensus 45 ~~~~~t~~~la~~l~~~~~~~s~~l~~L~~~Gli~r~~~~~D~R~~~l~lT~~ 97 (136)
T d2bv6a1 45 DESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDK 97 (136)
T ss_dssp HSSEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHH
T ss_pred cCCCCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEEeecCCcccchhhccCHH
Confidence 3457899999999999999999999999999999988887777 6666643
No 88
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=59.87 E-value=24 Score=26.16 Aligned_cols=49 Identities=20% Similarity=0.105 Sum_probs=40.1
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEe---eeccCCEEEEccC
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGH---IDQVNRLLERGDR 401 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~---IDq~~g~v~~~~~ 401 (430)
.-.++.++||+.++++..-+-..+-+|+..|.|.=. -|+-...|.+++.
T Consensus 42 ~~~~t~~~la~~l~i~~~tvs~~l~~L~~~gli~r~~~~~D~R~~~i~LT~~ 93 (139)
T d2a61a1 42 EGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRK 93 (139)
T ss_dssp HCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHH
T ss_pred cCCCCHHHHHHHhCCCcccchHHHHHHHhcCeeeeeeccCCCCeEEEEECHH
Confidence 457899999999999999999999999999988644 4555566777653
No 89
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=59.34 E-value=18 Score=26.69 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=36.8
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCE
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRL 395 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~ 395 (430)
..++-++||+.+++|+..+++.+.+|-..|.+...=-...|.
T Consensus 17 ~~~ss~~IA~~~~~~~~~v~kIl~~L~~aglV~s~rG~~GGy 58 (127)
T d1xd7a_ 17 EKTSSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGAS 58 (127)
T ss_dssp SCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSSSSSCE
T ss_pred CCCCHHHHHHHhCcCHHHHHHHHHHHHHhCcccccCCCCCcc
Confidence 358999999999999999999999999999998776665554
No 90
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=56.28 E-value=30 Score=25.59 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=41.7
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEcc
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGD 400 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~ 400 (430)
...++.+.||+.++++..-+-..|.+|...|.|.-.-|..+| .|.+++
T Consensus 46 ~~~~t~~ela~~~~i~~~~vs~~v~~L~~~glv~r~~~~~D~R~~~i~lT~ 96 (138)
T d1jgsa_ 46 AACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT 96 (138)
T ss_dssp HSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECH
T ss_pred CcCCCHHHHHHHHCCCHhHHHHHHHHHhhCCCEEEeeccCCCCeeEEEECH
Confidence 447899999999999999999999999999999988888887 444444
No 91
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=55.38 E-value=8.3 Score=25.83 Aligned_cols=44 Identities=11% Similarity=0.160 Sum_probs=36.6
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCC
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRS 402 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~ 402 (430)
.++-++||+.+|++.+-|-..+.++-.+|.|. ...|.|.+.+..
T Consensus 27 ~lt~~elA~~lg~sr~tvsr~l~~l~~~g~I~----~~~~~i~I~d~~ 70 (73)
T d1zyba1 27 KVKMDDLARCLDDTRLNISKTLNELQDNGLIE----LHRKEILIPDAQ 70 (73)
T ss_dssp ECCHHHHHHHHTSCHHHHHHHHHHHHHTTSCE----EETTEEEESCGG
T ss_pred ecCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE----ecCCEEEEccHH
Confidence 46789999999999999999999999998875 456677776543
No 92
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=54.34 E-value=5 Score=29.53 Aligned_cols=44 Identities=14% Similarity=0.099 Sum_probs=38.3
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCE
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRL 395 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~ 395 (430)
|=..++..+||+.++++..-+-..+.+|...|.|.=.-|..++.
T Consensus 46 ~~~~~t~~~la~~l~~~~~tvs~~i~~Le~~gli~r~~~~~D~R 89 (115)
T d2frha1 46 KEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDER 89 (115)
T ss_dssp CCSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSC
T ss_pred CCCCCCHHHHHHHHCCCHhHHHHHHHHHHhhhhheeeecccCCc
Confidence 33568999999999999999999999999999998777777663
No 93
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=53.13 E-value=16 Score=27.04 Aligned_cols=49 Identities=8% Similarity=0.102 Sum_probs=43.2
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEcc
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGD 400 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~ 400 (430)
|-..++..+||+.++++..-+-..|-+|...|.|.-.-|..++ .|.+++
T Consensus 42 ~~~~it~~ela~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~ 93 (135)
T d3broa1 42 KNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTK 93 (135)
T ss_dssp TTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECH
T ss_pred CCCCCCHHHHHHHHCcCHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccH
Confidence 5567999999999999999999999999999999988888877 666664
No 94
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=52.09 E-value=22 Score=24.73 Aligned_cols=69 Identities=9% Similarity=0.031 Sum_probs=50.2
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCCc-cchHHHHHHHHHHHHHHHHHHHhh
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSK-GMKKYTAIDKWNSQLRSLYQTVSN 427 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~~-~~~~~~~l~~w~~~v~~l~~~v~~ 427 (430)
.++..+|....+++-+-+.+.+..|+..|.|. +.++...+++... --+.|+.+.+..++++++...|+.
T Consensus 18 g~~kT~i~~~aNLs~~~~~kyl~~L~~~GLI~----~~~~~Y~iT~kG~~~L~~~~~~~~~~~~l~~l~~~i~~ 87 (90)
T d1r7ja_ 18 GSPKTRIMYGANLSYALTGRYIKMLMDLEIIR----QEGKQYMLTKKGEELLEDIRKFNEMRKNMDQLKEKINS 87 (90)
T ss_dssp CBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE----EETTEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHcCCCHHHHHHHHHHHHHCCCee----ecCCEEEECccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999996 3456666665432 112355566666666666666554
No 95
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=49.55 E-value=36 Score=25.32 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=38.6
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEee---eccCCEEEEccC
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHI---DQVNRLLERGDR 401 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~I---Dq~~g~v~~~~~ 401 (430)
..++...||+.+|++..-+-..|.+|...|.|.=.- |+-.-+|.+++.
T Consensus 48 g~~t~~~La~~~~~~~~~vs~~i~~L~~~glv~r~~~~~DrR~~~i~LT~~ 98 (145)
T d2hr3a1 48 GDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSE 98 (145)
T ss_dssp SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHHcCCeEeeeCccchhHHHhccCHH
Confidence 469999999999999999999999999999996554 455556676654
No 96
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=49.09 E-value=15 Score=23.65 Aligned_cols=39 Identities=10% Similarity=0.021 Sum_probs=33.2
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCc
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNR 384 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~ 384 (430)
|+.++..-..+|.++||+.||+|..-|-+.|..|=..|.
T Consensus 10 iL~~L~~~~~~s~~eLa~~l~vS~~ti~r~i~~L~~~G~ 48 (63)
T d1biaa1 10 LIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGV 48 (63)
T ss_dssp HHHHHTTSSCBCHHHHHHHHTSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCcCCHHHHHHHHCcCHHHHHHHHHHHHHCCC
Confidence 455555567899999999999999999999999988885
No 97
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=48.93 E-value=13 Score=24.80 Aligned_cols=42 Identities=10% Similarity=0.138 Sum_probs=35.4
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEE
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLER 398 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~ 398 (430)
..+++++||+.+|+|..-+-+++..|...|-+.= |. +|....
T Consensus 19 ~~~s~~eia~~~~~~~st~~rll~tL~~~g~l~~--~~-~g~y~l 60 (75)
T d1mkma1 19 GDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLR--KK-DKRYVP 60 (75)
T ss_dssp SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE--CT-TSCEEE
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE--CC-CCCEee
Confidence 5799999999999999999999999999998863 32 565443
No 98
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=48.31 E-value=11 Score=29.54 Aligned_cols=54 Identities=9% Similarity=-0.081 Sum_probs=41.0
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEc
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERG 399 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~ 399 (430)
++.++..+..++..+||+.++++..-+-..+.+|+..|.|.-.-|..++ .|.++
T Consensus 46 vL~~l~~~~~~t~~~la~~~~l~~~tvs~~i~rL~~~gli~r~~~~~D~R~~~l~lT 102 (162)
T d2fxaa1 46 ILWIAYQLNGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLT 102 (162)
T ss_dssp HHHHHHHHTSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC------CEEEEC
T ss_pred HHhhhccCCCcCHHHHHHHHcCCchhhHHHHHHHHHCCCceeecccccCeeeeeccC
Confidence 3444445667999999999999999999999999999999877666665 44554
No 99
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=48.19 E-value=12 Score=24.07 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=30.1
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
-++-.+||+.+|++..-|-..+..|+.+|.|.
T Consensus 12 pisr~eLa~~~gls~~TVs~~v~~L~~~GlV~ 43 (62)
T d2hoea1 12 PVSRVELAEELGLTKTTVGEIAKIFLEKGIVV 43 (62)
T ss_dssp CBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEE
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEE
Confidence 48899999999999999999999999999995
No 100
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=47.29 E-value=18 Score=23.28 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=33.0
Q ss_pred HHHHHHHhccccc-ccchhhHHhHhCCChHHHHHHHHHhhhcCc
Q 014143 342 RTQVLLKLIKPYT-RIRIPFISKELNVPEKDVEQLLVSLILDNR 384 (430)
Q Consensus 342 ~~~~l~~i~~~Y~-~I~l~~lA~~l~l~~~evE~~l~~lI~~g~ 384 (430)
|...|+.++.... .|+.++||+.|++|..-|-..|..+=..|.
T Consensus 8 R~~~Il~~L~~~~~~vs~~~La~~l~VS~~TI~rdi~~L~~~G~ 51 (65)
T d1j5ya1 8 RLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGY 51 (65)
T ss_dssp HHHHHHHHHHHCSSCBCHHHHHHHHTSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHCCCHHHHHHHHHHHHHCCC
Confidence 3445566654444 599999999999999999998888766663
No 101
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=44.29 E-value=11 Score=25.46 Aligned_cols=43 Identities=19% Similarity=0.132 Sum_probs=33.2
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccC
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDR 401 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~ 401 (430)
.++-.+||..+|++.+-|-+.+.++-.+|.|. ...|.+.+.+.
T Consensus 30 ~lt~~elA~~~g~sretvsr~l~~l~~~glI~----~~~~~i~I~d~ 72 (80)
T d3e5ua1 30 PLSQKSIGEITGVHHVTVSRVLASLKRENILD----KKKNKIIVYNL 72 (80)
T ss_dssp CCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE----C----CEESCH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCcEE----ecCCEEEEcCH
Confidence 46778999999999999999999999999764 35666777654
No 102
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=41.92 E-value=12 Score=24.43 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=29.5
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
.+|=++||..+|++.+-|-+.+.++-.+|.|.
T Consensus 29 ~lt~~~lA~~~G~sRetvsr~L~~l~~~glI~ 60 (69)
T d1i5za1 29 KITRQEIGQIVGCSRETVGRILKMLEDQNLIS 60 (69)
T ss_dssp ECCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
Confidence 47789999999999999999999999999874
No 103
>d1xn7a_ a.4.5.62 (A:) Hypothetical protein YhgG {Escherichia coli [TaxId: 562]}
Probab=40.79 E-value=19 Score=23.98 Aligned_cols=50 Identities=20% Similarity=0.210 Sum_probs=39.6
Q ss_pred HHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEE
Q 014143 347 LKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLL 396 (430)
Q Consensus 347 ~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v 396 (430)
+..+.-+-+.....|++.|..|..-||.++.++..=|++.-.=-..+|++
T Consensus 8 RD~iAL~G~~da~qlS~qL~~P~Plv~AMLerL~aMGK~erie~d~~gCL 57 (78)
T d1xn7a_ 8 RDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCL 57 (78)
T ss_dssp HHHHHHSCSBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECCCCCCCC
T ss_pred HHHHHHcCcccHHHHHHHHcCChHHHHHHHHHHHHhhcceeccccccccc
Confidence 44456678899999999999999999999999999999864333334554
No 104
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=40.64 E-value=17 Score=22.21 Aligned_cols=36 Identities=8% Similarity=0.161 Sum_probs=27.0
Q ss_pred HHHHHhcc--cccccchhhHHhHhCCChHHHHHHHHHh
Q 014143 344 QVLLKLIK--PYTRIRIPFISKELNVPEKDVEQLLVSL 379 (430)
Q Consensus 344 ~~l~~i~~--~Y~~I~l~~lA~~l~l~~~evE~~l~~l 379 (430)
+.++.+++ +...+++++||+.+|++...+.+...+.
T Consensus 6 ~~v~~yI~~~~~~~~tl~~lA~~~~~s~~~l~r~Fk~~ 43 (54)
T d1bl0a1 6 HSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKE 43 (54)
T ss_dssp HHHHHHHHTTTTSCCCCHHHHHHSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCHHHHHHHHCcCHHHHHHHHHHH
Confidence 34445543 3478999999999999998888776654
No 105
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=40.32 E-value=12 Score=24.41 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|.+-....+. ..|..+|+..||+..|++..-+
T Consensus 3 r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~~ 38 (71)
T d1jt6a1 3 KDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNL 38 (71)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHHCcCHhHH
Confidence 4555555555554 5799999999999999998654
No 106
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR, N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Probab=40.12 E-value=7.9 Score=27.71 Aligned_cols=64 Identities=16% Similarity=0.187 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHhccccccc-chhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccC
Q 014143 336 DLLKNVRTQVLLKLIKPYTRI-RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDR 401 (430)
Q Consensus 336 ~L~~~i~~~~l~~i~~~Y~~I-~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~ 401 (430)
.+.+.|+..-..--+.|=.++ +...||+.+|++..-|.+-+..|..+|.|..+ +..|+.+...+
T Consensus 13 qi~~~i~~~I~~g~l~~G~~LPs~r~La~~~~vSr~tvr~Al~~L~~~Gli~~~--~g~G~~V~~~~ 77 (100)
T d1v4ra1 13 DVATHFRTLIKSGELAPGDTLPSVADIRAQFGVAAKTVSRALAVLKSEGLVSSR--GALGTVVEKNP 77 (100)
T ss_dssp HHHHHHHHHTTTTSCCTTSBCCCHHHHHHHSSSCTTHHHHHTTTTTTSSCCEEE--TTTEEESCSCC
T ss_pred HHHHHHHHHHHcCCCCCcCCCccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEe--cCCEEEECCCC
Confidence 344444433333334666888 89999999999999999999999999998754 66677665443
No 107
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=38.21 E-value=12 Score=24.29 Aligned_cols=30 Identities=10% Similarity=0.126 Sum_probs=26.2
Q ss_pred ccccccchhhHHhHhCCChHHHHHHHHHhh
Q 014143 351 KPYTRIRIPFISKELNVPEKDVEQLLVSLI 380 (430)
Q Consensus 351 ~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI 380 (430)
..|...++++||+.+|+|+.-|...+.+..
T Consensus 30 ~~~~~~s~~eIA~~lgis~~tv~~~l~ra~ 59 (68)
T d1or7a1 30 RELDGLSYEEIAAIMDCPVGTVRSRIFRAR 59 (68)
T ss_dssp HHTTCCCHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 456788899999999999999999888765
No 108
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=38.06 E-value=12 Score=24.46 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=26.0
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhh
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLIL 381 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~ 381 (430)
.|.-.|...||+.+|+|+.-|...+.++..
T Consensus 34 ~~~~~s~~eIA~~lgis~~tv~~~~~ra~~ 63 (71)
T d1rp3a2 34 FYEELPAKEVAKILETSVSRVSQLKAKALE 63 (71)
T ss_dssp HTSCCCHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HhHhCCHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 467889999999999999999988887653
No 109
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=37.39 E-value=34 Score=24.94 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=37.5
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR 394 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g 394 (430)
|=..++..+||+.++++...+-..|-+|...|.|.-.-|..++
T Consensus 47 ~~~~~t~~eia~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~ 89 (125)
T d1p4xa1 47 QENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDE 89 (125)
T ss_dssp SCSEEEHHHHHHHSSSCGGGTHHHHHHHHHTTSCEEEECSSST
T ss_pred ccCCcCHHHHHHHhCCCcchHHHHHHHHHHCCCceeecccCCC
Confidence 3357999999999999999999999999999999877666655
No 110
>d2zcwa1 a.4.5.4 (A:118-199) Transcriptional regulator TTHA1359, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=37.23 E-value=15 Score=24.83 Aligned_cols=44 Identities=9% Similarity=0.039 Sum_probs=36.5
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCC
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRS 402 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~ 402 (430)
.+|-.+||+.+|++.+.|-..+.++..+|.|.- ..|.+.+.+++
T Consensus 29 ~lt~~elA~~lg~sr~tv~r~L~~l~~~gli~~----~~~~i~I~d~~ 72 (82)
T d2zcwa1 29 KATHDELAAAVGSVRETVTKVIGELAREGYIRS----GYGKIQLLDLK 72 (82)
T ss_dssp ECCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE----ETTEEEESCHH
T ss_pred cCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe----cCCEEEEcCHH
Confidence 578899999999999999999999999998853 35667776653
No 111
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=36.94 E-value=11 Score=25.23 Aligned_cols=26 Identities=15% Similarity=0.095 Sum_probs=22.8
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHH
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVS 378 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~ 378 (430)
=+.-+..+||+.+|++++++..++..
T Consensus 24 GR~Pt~~EiA~~lg~s~~e~~~~l~~ 49 (77)
T d1rp3a1 24 GREPTDEEVAKELGISTEELFKTLDK 49 (77)
T ss_dssp SSCCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHCcCHHHHHHHHHH
Confidence 47789999999999999999988754
No 112
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=36.82 E-value=18 Score=23.42 Aligned_cols=34 Identities=15% Similarity=0.255 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhcc--cccccchhhHHhHhCCChHHH
Q 014143 339 KNVRTQVLLKLIK--PYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 339 ~~i~~~~l~~i~~--~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+.|..-.+.-+.+ -|..+|+..||+..|++..-+
T Consensus 5 ~~Ii~aa~~l~~e~~G~~~~t~~~Ia~~agvs~~~i 40 (68)
T d1z0xa1 5 DTIIAAAFSLLEKSPTLEQLSMRKVAKQLGVQAPAI 40 (68)
T ss_dssp HHHHHHHHHHHHHSCCGGGCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHcCCccccCHHHHHHHHCcchhHH
Confidence 4566666666664 499999999999999997433
No 113
>d2htja1 a.4.5.73 (A:1-73) P fimbrial regulatory protein PapI {Escherichia coli [TaxId: 562]}
Probab=36.48 E-value=28 Score=22.41 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=43.7
Q ss_pred HHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeE-eeeccCCEEEEcc
Q 014143 345 VLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDG-HIDQVNRLLERGD 400 (430)
Q Consensus 345 ~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g-~IDq~~g~v~~~~ 400 (430)
+|+.++.....-+-.+||+.+|++.=++...|+.+=.+|+|.- -+-++..++.+-.
T Consensus 4 ~Il~fl~~~~~~~T~EIAea~gvsaYQARyYL~~Lekegki~RsPlRrGa~TlW~~~ 60 (73)
T d2htja1 4 EILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWFLK 60 (73)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEECCSSSSSCEEEES
T ss_pred HHHHHHHhcCCccHHHHHHHhhhHHHHHHHHHHHHHHhcCcccChhhhhhHHHHHHh
Confidence 4455544445558899999999999999999999999999964 5667777777653
No 114
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=36.33 E-value=16 Score=27.23 Aligned_cols=48 Identities=8% Similarity=0.158 Sum_probs=41.2
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEcc
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGD 400 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~ 400 (430)
...++.+.||+.++++..-+-..+-+|+..|.|.-.-|..++ .|..++
T Consensus 45 ~~~~t~~~La~~~~i~~~~vsr~i~~L~~~glv~r~~~~~D~R~~~i~lT~ 95 (137)
T d1z91a1 45 HETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTE 95 (137)
T ss_dssp HSEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECH
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHhhccceEEeecCCCCCeEEEEECH
Confidence 568999999999999999999999999999999877776654 566664
No 115
>d1s6la1 a.4.5.79 (A:21-80) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=36.21 E-value=8.9 Score=24.53 Aligned_cols=28 Identities=14% Similarity=0.133 Sum_probs=25.0
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhh
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLI 380 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI 380 (430)
=+-|+.+.||..+|.|+++|+.-|..|-
T Consensus 14 G~PVs~~~LA~alg~~~~eV~~aL~~~p 41 (60)
T d1s6la1 14 GRPVSRTTLAGILDWPAERVAAVLEQAT 41 (60)
T ss_dssp TCCBCHHHHHHHHTCCHHHHHHHHTTCC
T ss_pred CCCcCHHHHHHHhCCCHHHHHHHHHhCC
Confidence 3668999999999999999999988876
No 116
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=36.07 E-value=18 Score=24.07 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 337 LLKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 337 L~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
-+++|.+-.+..+. +.|..+|+..||+..|++..-+
T Consensus 5 tre~Il~aa~~~~~~~G~~~~ti~~Ia~~agvs~~s~ 41 (79)
T d2fbqa1 5 TVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAV 41 (79)
T ss_dssp HHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccccHHHHHHHHCcChhHH
Confidence 35566666666665 5799999999999999998654
No 117
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.76 E-value=1.1e+02 Score=26.26 Aligned_cols=168 Identities=11% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhhhhhhHH
Q 014143 57 LKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWF 136 (430)
Q Consensus 57 l~~l~~l~~~~~~~~~l~e~~~~l~~~~~~~~~k~~~~k~v~~il~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~kl~~ 136 (430)
+..+|+.|.+.|.|+.+..+|+.+..+- ..+.-----...+.+++.+.+..+ .+....+...+.+ ..+.++-.
T Consensus 17 ~~~i~~~c~~~~lye~A~~lY~~~~d~~-rl~~~~v~l~~~~~avd~~~k~~~--~~~~k~~~~~l~~----~~e~~la~ 89 (336)
T d1b89a_ 17 IQQVGDRCYDEKMYDAAKLLYNNVSNFG-RLASTLVHLGEYQAAVDGARKANS--TRTWKEVCFACVD----GKEFRLAQ 89 (336)
T ss_dssp ------------CTTTHHHHHHHTTCHH-HHHHHHHTTTCHHHHHHHHHHHTC--HHHHHHHHHHHHH----TTCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHhCCCHH-HHHHHHHhhccHHHHHHHHHHcCC--HHHHHHHHHHHHh----CcHHHHHH
Q ss_pred ----------HHhHHHHHHHHHhccHHHHHHHHHHHHhhccCCCCCcchhhcchHHHHHHHHHHHHHhhcCHHHHHHHHH
Q 014143 137 ----------KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQ 206 (430)
Q Consensus 137 ----------r~~~~La~~~~~~g~~~~A~~~l~el~~~~~~~~~~~d~~~~~~~~e~~l~~~~l~~~~~d~~ka~~~l~ 206 (430)
.-..-+...|.+.|.+++...+|...... + .....++-..+. ..+.-+..+....+.
T Consensus 90 i~~~~~~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~--------~----~~~~~~~~~L~~-lyak~~~~kl~e~l~ 156 (336)
T d1b89a_ 90 MCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL--------E----RAHMGMFTELAI-LYSKFKPQKMREHLE 156 (336)
T ss_dssp HTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------T----TCCHHHHHHHHH-HHHTTCHHHHHHHHH
T ss_pred HHHHHhhcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcC--------C----ccchHHHHHHHH-HHHHhChHHHHHHHH
Q ss_pred HHHhhhccCCCchh-----HHHHHHhhhHhhhhhhcHHHHHHHHHH
Q 014143 207 KALAIKSAIPHPRI-----MGIIRECGGKMHMAERQWADAATDFFE 247 (430)
Q Consensus 207 ~a~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~y~~A~~~f~e 247 (430)
... +...-|++ ...++.-...++..-++|.+|....++
T Consensus 157 ~~s---~~y~~~k~~~~c~~~~l~~elv~Ly~~~~~~~~A~~~~i~ 199 (336)
T d1b89a_ 157 LFW---SRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN 199 (336)
T ss_dssp HHS---TTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hcc---ccCCHHHHHHHHHHcCChHHHHHHHHhcCCHHHHHHHHHH
No 118
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=35.58 E-value=18 Score=24.27 Aligned_cols=44 Identities=7% Similarity=0.036 Sum_probs=36.3
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCC
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRS 402 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~ 402 (430)
.++-.+||..+|++.+-|-+.+.++-.+|.|. ...+.+.+.+++
T Consensus 29 ~lt~~eLA~~~G~sretvsr~L~~l~~~glI~----~~~~~i~I~d~~ 72 (81)
T d2gaua1 29 YLSREELATLSNMTVSNAIRTLSTFVSERMLA----LDGKRIKIIDCD 72 (81)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHHHHHHHTTSEE----EETTEEEESCHH
T ss_pred cCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE----ecCCEEEEcCHH
Confidence 45667899999999999999999999998764 456778887753
No 119
>d2p4wa1 a.4.5.64 (A:1-194) Transcriptional regulatory protein PF1790 {Pyrococcus furiosus [TaxId: 2261]}
Probab=35.16 E-value=53 Score=25.85 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=33.7
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeec
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQ 391 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq 391 (430)
...+...||+.+|++..-|-..|..|-..|.|...-++
T Consensus 27 ~~~~~~ela~~l~~s~~~v~~HL~~L~~~Glv~~~~~~ 64 (194)
T d2p4wa1 27 RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEK 64 (194)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEee
Confidence 45788999999999999999999999999999876554
No 120
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=34.94 E-value=43 Score=23.98 Aligned_cols=50 Identities=12% Similarity=-0.031 Sum_probs=40.2
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC---EEEEccC
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR---LLERGDR 401 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g---~v~~~~~ 401 (430)
+-..++..+||+.++++..-+=..|-+|...|.|.=.-|..++ .|.+++.
T Consensus 45 ~~~~~t~~ela~~l~~~~~~vs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~~ 97 (115)
T d1hsja1 45 ESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDT 97 (115)
T ss_dssp SCSEEEHHHHHHSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCSS
T ss_pred CCCCcCHHHHHHHHCCChhhHHHHHHHHHHcCCeEEEeecCCCceEEEEECHH
Confidence 3457999999999999999999999999999999755555554 4555544
No 121
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=34.73 E-value=29 Score=23.08 Aligned_cols=39 Identities=8% Similarity=0.026 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 334 IEDLLKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 334 ~~~L~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
-..-++.|.+..+.-+. ..|..+++.+||+..|++..-+
T Consensus 9 ~~~~r~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~ 48 (81)
T d1rkta1 9 KDKRQAEILEAAKTVFKRKGFELTTMKDVVEESGFSRGGV 48 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcccCCHHHHHHHhCcCHHHH
Confidence 34445666666655554 5699999999999999997544
No 122
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.59 E-value=49 Score=20.83 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=34.9
Q ss_pred HHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 347 LKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 347 ~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
+.=..|=.+++-..||..|++|..+|-+.|-.+-..|++.
T Consensus 8 l~~lg~~~~~tA~~LA~kl~vpKk~iNr~LYsL~~kgkl~ 47 (59)
T d2gxba1 8 LEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQ 47 (59)
T ss_dssp HHHHCTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHhcCCccchhHHHHHHHhCCcHHHHHHHHHHHHHccchh
Confidence 3445678899999999999999999999999999988874
No 123
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.21 E-value=32 Score=22.59 Aligned_cols=47 Identities=13% Similarity=0.167 Sum_probs=39.8
Q ss_pred HHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccC
Q 014143 345 VLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVN 393 (430)
Q Consensus 345 ~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~ 393 (430)
.++++.+..-.||.+.|-..+|.+.+.++..|-.|+.+|.. =||..+
T Consensus 7 ~vLe~a~~~G~Vt~s~l~~~lgW~~~Ra~~aLd~lv~eGl~--WvD~Q~ 53 (68)
T d1u5ta2 7 KILEICSILGYSSISLLKANLGWEAVRSKSALDEMVANGLL--WIDYQG 53 (68)
T ss_dssp HHHHTTTTTSCCBHHHHHHHHCCCSHHHHHHHHHHHHTTSS--EEECSS
T ss_pred HHHHHHHHcCceeHHHHHHHhCCCHHHHHHHHHHHHhcCcE--EEecCC
Confidence 56777777789999999999999999999999999999974 456443
No 124
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]}
Probab=34.05 E-value=11 Score=25.08 Aligned_cols=43 Identities=2% Similarity=0.131 Sum_probs=33.7
Q ss_pred HHhHhCCChHHHHHHHHHhhhcCcee-EeeeccCCEEEEccCCc
Q 014143 361 ISKELNVPEKDVEQLLVSLILDNRID-GHIDQVNRLLERGDRSK 403 (430)
Q Consensus 361 lA~~l~l~~~evE~~l~~lI~~g~i~-g~IDq~~g~v~~~~~~~ 403 (430)
|+..+|++.+++|.++.+.-..+.+. |-++.+..+|...+.+.
T Consensus 5 MaAVlg~~~~~v~~i~~~~~~~~~v~iAN~Nsp~Q~VISG~~~a 48 (70)
T d1mlaa2 5 MAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEA 48 (70)
T ss_dssp EEEEESCCHHHHHHHHHHHCTTSCEEEEEEEETTEEEEEEEHHH
T ss_pred EEEEeCCCHHHHHHHHHHhcCCCEEEEEecCCCcceeeeCCHHH
Confidence 45668999999999998865566554 67899999999887643
No 125
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=33.81 E-value=22 Score=23.15 Aligned_cols=35 Identities=9% Similarity=0.028 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|...++.-+. +.|..+|+..||+..|++..-+
T Consensus 7 r~~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~~ 42 (71)
T d1ui5a1 7 RATIIGAAADLFDRRGYESTTLSEIVAHAGVTKGAL 42 (71)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHHCcCHhHH
Confidence 3455555555554 5799999999999999998654
No 126
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.78 E-value=33 Score=20.80 Aligned_cols=27 Identities=0% Similarity=0.124 Sum_probs=22.2
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHh
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSL 379 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~l 379 (430)
...|++++||+.+|+++..+....-+.
T Consensus 17 ~~~itl~~lA~~~~~S~~~l~r~Fk~~ 43 (54)
T d1d5ya1 17 DQPLSLDNVAAKAGYSKWHLQRMFKDV 43 (54)
T ss_dssp SSSCCCHHHHTTTSSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHH
Confidence 478999999999999998877665443
No 127
>d1tw3a1 a.4.5.29 (A:14-98) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=33.69 E-value=42 Score=22.71 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 338 LKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 338 ~~~i~~~~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
.+...+..|...+. =..+++++||+.+|++++-++.++.-+..-|.+.
T Consensus 18 L~~av~L~ifd~l~-~gp~s~~eLA~~~g~~~~~l~rlLr~l~a~gl~~ 65 (85)
T d1tw3a1 18 VRTAATLRLVDHIL-AGARTVKALAARTDTRPEALLRLIRHLVAIGLLE 65 (85)
T ss_dssp HHHHHHTTHHHHHH-TTCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHcCcHHHhc-cCCCCHHHHHHHhCcChhHHHHHHHHHHHCCCeE
Confidence 34444555555552 3569999999999999999999999999999875
No 128
>d2crua1 a.5.6.1 (A:8-112) Programmed cell death protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.61 E-value=8.5 Score=27.94 Aligned_cols=51 Identities=16% Similarity=0.303 Sum_probs=32.7
Q ss_pred HHHHHHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeec
Q 014143 341 VRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQ 391 (430)
Q Consensus 341 i~~~~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq 391 (430)
.+...|.++..|=-+=.|++|+=.=-=-...||..|.+|...|.|.|+||.
T Consensus 31 ~k~~iL~qiLt~eAreRL~rI~lvkPe~A~~VE~~liqlaq~G~i~~kisd 81 (105)
T d2crua1 31 MRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSE 81 (105)
T ss_dssp HHHHHHHHHBCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCCSCBCH
T ss_pred HHHHHHHHHCCHHHHHHHHhhcccCHHHHHHHHHHHHHHHHcCCCCCCcCH
Confidence 445566777776544444444321000125899999999999999998874
No 129
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=31.99 E-value=73 Score=22.79 Aligned_cols=48 Identities=4% Similarity=0.075 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHH----hCCHHHHHHHHHHHHH
Q 014143 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYR----LGKYKEMMDAYREMLT 82 (430)
Q Consensus 29 ~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~----~~~~~~l~e~~~~l~~ 82 (430)
..|+++|++.|++..+... ..++..++.+|.. ..|.+++.++++....
T Consensus 36 ~~~~~~a~~~~~~aa~~g~------~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~ 87 (133)
T d1klxa_ 36 QINKQKLFQYLSKACELNS------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACG 87 (133)
T ss_dssp TSCHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHhhhhcccc------hhhhhhHHHhhhhccccchhhHHHHHHHhhhhc
Confidence 3456666666666544321 2444555555554 4455566666555544
No 130
>d1ldja3 e.40.1.1 (A:411-686) Cullin homolog 1, cul-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.93 E-value=27 Score=29.57 Aligned_cols=41 Identities=10% Similarity=0.097 Sum_probs=34.2
Q ss_pred HHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCcee
Q 014143 346 LLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 346 l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~ 386 (430)
++-.......++++.|++.+|++.+++...|..|+..|.+-
T Consensus 200 ILllFN~~~~~t~~ei~~~~~i~~~~l~~~L~~L~~~kll~ 240 (276)
T d1ldja3 200 ILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLV 240 (276)
T ss_dssp HHHGGGSSSEEEHHHHHHHTCCCHHHHHHHHHHHHHTTTEE
T ss_pred HHHhhcCCCccCHHHHHHHHCcCHHHHHHHHHHHHhCCEEE
Confidence 34345556789999999999999999999999999887763
No 131
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=31.88 E-value=20 Score=23.96 Aligned_cols=44 Identities=16% Similarity=0.102 Sum_probs=33.5
Q ss_pred ccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccC
Q 014143 355 RIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDR 401 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~ 401 (430)
.+|=.+||..+|++.+-|-+.+..|-.+|.|.- +..|.+.+.+.
T Consensus 30 ~~t~~eiA~~lG~sretvsr~l~~l~~~g~I~~---~~~~~i~I~d~ 73 (80)
T d1ft9a1 30 DFTVEEIANLIGSSRQTTSTALNSLIKEGYISR---QGRGHYTIPNL 73 (80)
T ss_dssp CCCHHHHHHHHCSCHHHHHHHHHHHHHTTSSEE---CSTTCEECSSH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE---CCCCeEEECCH
Confidence 455669999999999999999999999886632 12465666543
No 132
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=31.82 E-value=16 Score=23.66 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=24.4
Q ss_pred HHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 340 NVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 340 ~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
.+.+-++..+. ..|..+|+.+||+..|++..-+
T Consensus 4 ~iL~aA~~lf~~~G~~~~ti~~Ia~~agvs~~~~ 37 (69)
T d2i10a1 4 VALQTAMELFWRQGYEGTSITDLTKALGINPPSL 37 (69)
T ss_dssp HHHHHHHHHHHHHTTTTCCHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHCcccCCHHHHHHHhCCChhHH
Confidence 34444544444 4699999999999999998655
No 133
>d2f2ea1 a.4.5.69 (A:5-146) Hypothetical protein PA1607 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.79 E-value=42 Score=25.32 Aligned_cols=64 Identities=14% Similarity=0.114 Sum_probs=44.8
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCC-EEEEc-cC--CccchHHHHHHHHHHH
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNR-LLERG-DR--SKGMKKYTAIDKWNSQ 417 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g-~v~~~-~~--~~~~~~~~~l~~w~~~ 417 (430)
.....|++|.+.+|++..-+-.-|..|...|.|. ++....+ .+.-. .+ ..--.....|.+|+.+
T Consensus 31 ~G~~rf~el~~~lgis~~vLs~rL~~L~~~gLv~-r~~~~~p~r~~Y~LT~~G~~L~pil~~l~~W~~~ 98 (142)
T d2f2ea1 31 EGLTRFGEFQKSLGLAKNILAARLRNLVEHGVMV-AVPAESGSHQEYRLTDKGRALFPLLVAIRQWGED 98 (142)
T ss_dssp TTCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEE-EEECSSSSCEEEEECHHHHTTHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHhhccHHHHHHHHHHHHHhccee-eecCCCCCeeEEecCcCcchHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999999997 4443332 22221 11 1222356778888864
No 134
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=31.27 E-value=22 Score=23.49 Aligned_cols=35 Identities=9% Similarity=0.088 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|.+-++..+. ..|..+|+..||+..|++..-+
T Consensus 8 r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~l 43 (77)
T d2gfna1 8 RRALADAVLALIAREGISAVTTRAVAEESGWSTGVL 43 (77)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHSSCHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHHCCCHHHH
Confidence 5556666666555 5699999999999999997544
No 135
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=31.07 E-value=41 Score=21.88 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=24.9
Q ss_pred cccccchhhHHhHhCCChHHHHHHHHHhhh
Q 014143 352 PYTRIRIPFISKELNVPEKDVEQLLVSLIL 381 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~ 381 (430)
.+...|+.+||+.+|+|.+-|-.+-.+++.
T Consensus 22 ~~~~~tl~eI~~~lgiSrerVrqie~~al~ 51 (68)
T d2p7vb1 22 MNTDYTLEEVGKQFDVTRERIRQIEAKALR 51 (68)
T ss_dssp SSSCCCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 357789999999999999888777777664
No 136
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=30.64 E-value=27 Score=22.48 Aligned_cols=31 Identities=6% Similarity=0.183 Sum_probs=22.6
Q ss_pred HHHHHHHHhc-ccccccchhhHHhHhCCChHH
Q 014143 341 VRTQVLLKLI-KPYTRIRIPFISKELNVPEKD 371 (430)
Q Consensus 341 i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~e 371 (430)
|.+..+.-+. +.|..+|+..||+..|++..-
T Consensus 9 Il~aa~~l~~~~g~~~~si~~ia~~~gvs~~~ 40 (68)
T d2g7la1 9 IVDTAVALMRAEGLEKVTMRRLAQELDTGPAS 40 (68)
T ss_dssp HHHHHHHHHHHHCSSSCCHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHHHhCcccCCHHHHHHHHCcCHhH
Confidence 4333444343 579999999999999999743
No 137
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=30.60 E-value=22 Score=27.72 Aligned_cols=43 Identities=16% Similarity=0.164 Sum_probs=33.6
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeeeccCCEE
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLL 396 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v 396 (430)
..++.++||+.++++..-+-..|-+|...|.|.-.-|..++..
T Consensus 78 ~~lt~~eLa~~l~i~~~tvsr~l~~Le~~GlV~r~~~~~DrR~ 120 (172)
T d2fbka1 78 EGLRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRS 120 (172)
T ss_dssp SCBCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------
T ss_pred CCcCHHHHHHHHCcCHhHHHHHHHHHHhCCCeeeeccccchhh
Confidence 4699999999999999999999999999999987777666633
No 138
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=30.58 E-value=44 Score=21.15 Aligned_cols=28 Identities=7% Similarity=0.068 Sum_probs=24.0
Q ss_pred ccccchhhHHhHhCCChHHHHHHHHHhh
Q 014143 353 YTRIRIPFISKELNVPEKDVEQLLVSLI 380 (430)
Q Consensus 353 Y~~I~l~~lA~~l~l~~~evE~~l~~lI 380 (430)
....|+.+||+.+|+|.+-|.....+++
T Consensus 26 ~~~~tl~eIa~~lgiS~erVrqi~~~al 53 (61)
T d1ku3a_ 26 GREHTLEEVGAYFGVTRERIRQIENKAL 53 (61)
T ss_dssp SSCCCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5779999999999999998887776665
No 139
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=30.14 E-value=21 Score=23.26 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|.+-.+.-+. ..|..+|+..||+..|++..-+
T Consensus 4 r~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~i 39 (73)
T d1sgma1 4 REKILHTASRLSQLQGYHATGLNQIVKESGAPKGSL 39 (73)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCCSCHH
T ss_pred HHHHHHHHHHHHHHhCcccCCHHHHHHHhCCCHHHH
Confidence 3445555555454 5799999999999999987544
No 140
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=29.93 E-value=49 Score=21.69 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=35.4
Q ss_pred HHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeE
Q 014143 347 LKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDG 387 (430)
Q Consensus 347 ~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g 387 (430)
..-..+=..++-..||+.||++..+|-..|-+|-..|.+..
T Consensus 16 l~~L~~~~~~tA~~LAk~Lg~~Kk~VNr~LY~L~~~G~v~~ 56 (70)
T d1sfua_ 16 VLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKM 56 (70)
T ss_dssp HHTSCTTCEECHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHhcCCCCCchHHHHHHHhCCCHHHHHHHHHHHHHCCCeec
Confidence 44456667889999999999999999999999999998864
No 141
>d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.39 E-value=42 Score=22.81 Aligned_cols=27 Identities=26% Similarity=0.454 Sum_probs=22.5
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHhh
Q 014143 60 TVKLYYRLGKYKEMMDAYREMLTYIKS 86 (430)
Q Consensus 60 l~~l~~~~~~~~~l~e~~~~l~~~~~~ 86 (430)
=+.-+.+.|+||+++++..+-..++..
T Consensus 14 rAer~l~~~rydeAIech~kA~~yl~e 40 (83)
T d2crba1 14 RADRLLAAGKYEEAISCHRKATTYLSE 40 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 356678899999999999999998733
No 142
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=28.98 E-value=38 Score=21.87 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
++.|..-.+.-+. +.|..+|+..||+..|++..-+
T Consensus 6 r~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~ 41 (72)
T d1pb6a1 6 KKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNL 41 (72)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHhCCChHHH
Confidence 3445555555454 5799999999999999997544
No 143
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=28.92 E-value=29 Score=22.62 Aligned_cols=34 Identities=0% Similarity=0.010 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 339 KNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 339 ~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+.|..-.+.-+. +-|..+|+..||+..|++..-+
T Consensus 7 ~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~ 41 (74)
T d1v7ba1 7 EMILRTAIDYIGEYSLETLSYDSLAEATGLSKSGL 41 (74)
T ss_dssp HHHHHHHHHHHHHSCSTTCCHHHHHHHHCSCHHHH
T ss_pred HHHHHHHHHHHHHhCccccCHHHHHHHhCcCcchH
Confidence 344444444444 4599999999999999998554
No 144
>d1eija_ a.5.6.1 (A:) Hypothetical protein MTH1615 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=28.91 E-value=13 Score=24.90 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhhcCceeEeeec
Q 014143 370 KDVEQLLVSLILDNRIDGHIDQ 391 (430)
Q Consensus 370 ~evE~~l~~lI~~g~i~g~IDq 391 (430)
..||..|.+|...|+|.|+||.
T Consensus 37 ~~vE~~liqlaq~G~i~~kisd 58 (72)
T d1eija_ 37 EQIELQLIQLAQMGRVRSKITD 58 (72)
T ss_dssp HHHHHHHHHHHHCCSSCCCCCH
T ss_pred HHHHHHHHHHHHcCCCCCCcCH
Confidence 4899999999999999998874
No 145
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.85 E-value=28 Score=22.40 Aligned_cols=33 Identities=9% Similarity=0.058 Sum_probs=24.3
Q ss_pred HHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 340 NVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 340 ~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+|....+.-+. ..|..+|+..||+..|++..-+
T Consensus 4 ~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~ 37 (70)
T d2gena1 4 EILQAALACFSEHGVDATTIEMIRDRSGASIGSL 37 (70)
T ss_dssp HHHHHHHHHHHHHCTTTCCHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHHHHHhCcccCCHHHHHHHHCcCHHHH
Confidence 34444444443 5699999999999999998654
No 146
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=28.55 E-value=86 Score=21.62 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=32.9
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEee
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHI 389 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~I 389 (430)
...+..+||+.+|++..-+-..|..|-..|.+..+=
T Consensus 35 ~~~~v~ela~~l~is~stvS~HL~~L~~aglV~~~r 70 (98)
T d1r1ta_ 35 SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRK 70 (98)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEE
Confidence 457889999999999999999999999999999863
No 147
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=28.41 E-value=30 Score=22.08 Aligned_cols=22 Identities=14% Similarity=0.075 Sum_probs=19.4
Q ss_pred ccccccchhhHHhHhCCChHHH
Q 014143 351 KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 351 ~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+.|..+++..||+..|++..-+
T Consensus 17 ~G~~~~ti~~Ia~~agvs~~~i 38 (69)
T d2np5a1 17 SGLEGASVREVAKRAGVSIGAV 38 (69)
T ss_dssp HCGGGCCHHHHHHHHTCCHHHH
T ss_pred hCccccCHHHHHHHhCCCHHHH
Confidence 5799999999999999998544
No 148
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=28.27 E-value=27 Score=22.63 Aligned_cols=33 Identities=6% Similarity=0.066 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhc-ccccccchhhHHhHhCCChHH
Q 014143 339 KNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKD 371 (430)
Q Consensus 339 ~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~e 371 (430)
++|..-...-+. +.|..+|+..||+..|++..-
T Consensus 6 e~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~s 39 (72)
T d1zk8a1 6 QKIVETAAEIADANGVQEVTLASLAQTLGVRSPS 39 (72)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccHHHHHHHhCCCHHH
Confidence 344444444444 469999999999999999743
No 149
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=28.13 E-value=28 Score=22.69 Aligned_cols=35 Identities=11% Similarity=0.163 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|.+..+.-+. +.|..+|+..||+..|++..-+
T Consensus 6 r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~i 41 (74)
T d2g7sa1 6 ADDILQCARTLIIRGGYNSFSYADISQVVGIRNASI 41 (74)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHHCcCcchH
Confidence 4455555555444 5699999999999999998654
No 150
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=27.73 E-value=31 Score=22.29 Aligned_cols=20 Identities=15% Similarity=0.345 Sum_probs=18.2
Q ss_pred ccccccchhhHHhHhCCChH
Q 014143 351 KPYTRIRIPFISKELNVPEK 370 (430)
Q Consensus 351 ~~Y~~I~l~~lA~~l~l~~~ 370 (430)
++|..+|+..||+..|++..
T Consensus 22 ~G~~~~sv~~Ia~~agvs~~ 41 (71)
T d2iu5a1 22 NAYHQISVSDIMQTAKIRRQ 41 (71)
T ss_dssp SCGGGCCHHHHHHHHTSCGG
T ss_pred cCcccCCHHHHHHHhCcccc
Confidence 67999999999999999873
No 151
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=26.97 E-value=41 Score=21.65 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 339 KNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 339 ~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+.|.+-+...+. ..|..+|+..||+..|++..-+
T Consensus 6 ~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~ 40 (73)
T d1t56a1 6 LAILATAENLLEDRPLADISVDDLAKGAGISRPTF 40 (73)
T ss_dssp HHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHhCcccCCHHHHHHHhCCCHHHH
Confidence 344444444443 5699999999999999997544
No 152
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=26.94 E-value=39 Score=21.56 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 337 LLKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 337 L~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
.++.|.+-.+.-+. ..|..+|+..||+..|++..-+
T Consensus 7 ~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~i 43 (68)
T d2id3a1 7 IREAVLLAAGDALAADGFDALDLGEIARRAGVGKTTV 43 (68)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccCCHHHHHHHHCcCHHHH
Confidence 45555555555454 5699999999999999997544
No 153
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=26.69 E-value=21 Score=22.52 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=18.5
Q ss_pred ccchhhHHhHhCCChHHHHHHHH
Q 014143 355 RIRIPFISKELNVPEKDVEQLLV 377 (430)
Q Consensus 355 ~I~l~~lA~~l~l~~~evE~~l~ 377 (430)
.|+|.+||+..|++..-|-..|.
T Consensus 1 NvTi~dvA~~agvS~~TVSr~Ln 23 (57)
T d2hsga1 1 NVTIYDVAREASVSMATVSRVVN 23 (57)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHHT
T ss_pred CcCHHHHHHHHCcCHHHHHHHhC
Confidence 48999999999999876655443
No 154
>d2hzta1 a.4.5.69 (A:4-98) Putative transcriptional regulator YtcD {Bacillus subtilis [TaxId: 1423]}
Probab=26.53 E-value=93 Score=21.34 Aligned_cols=65 Identities=15% Similarity=0.139 Sum_probs=47.3
Q ss_pred ccccchhhHHhHh-CCChHHHHHHHHHhhhcCceeEeeeccCCE-EEEc-cC--CccchHHHHHHHHHHH
Q 014143 353 YTRIRIPFISKEL-NVPEKDVEQLLVSLILDNRIDGHIDQVNRL-LERG-DR--SKGMKKYTAIDKWNSQ 417 (430)
Q Consensus 353 Y~~I~l~~lA~~l-~l~~~evE~~l~~lI~~g~i~g~IDq~~g~-v~~~-~~--~~~~~~~~~l~~w~~~ 417 (430)
+....|++|...+ |+|..-+-.-|..|..+|.|.-...+.... |+-. .+ ..-......+.+|+.+
T Consensus 22 ~g~~rF~el~~~l~gis~~~Ls~rLk~Le~~glv~r~~~~~~p~~veY~LT~~G~~L~pil~~l~~W~~~ 91 (95)
T d2hzta1 22 HGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLEGILDMLCAWGAN 91 (95)
T ss_dssp TCCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHhhcCChhHHHHHHHHHHHhHHHhheeccccccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4556799999998 999999999999999999998777665543 3222 11 1222456778888864
No 155
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=26.51 E-value=31 Score=22.29 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=24.0
Q ss_pred HHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 340 NVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 340 ~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+|.+-.+.-+. ..|..+|+..||+..|++..-+
T Consensus 5 ~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~~ 38 (72)
T d1vi0a1 5 QIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTI 38 (72)
T ss_dssp HHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHhCcccccHHHHHHHHCcCHHHH
Confidence 34444444444 4699999999999999997544
No 156
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=26.19 E-value=34 Score=22.21 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|..-++.-+. ..|..+|+..||+..|++..-+
T Consensus 7 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~ 42 (75)
T d3c07a1 7 RALILETAMRLFQERGYDRTTMRAIAQEAGVSVGNA 42 (75)
T ss_dssp HHHHHHHHHHHHHHTCSTTCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHhCcccCCHHHHHHHHCcCHHHH
Confidence 4555555555554 4699999999999999998544
No 157
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=26.01 E-value=34 Score=22.55 Aligned_cols=35 Identities=9% Similarity=0.017 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|..-.+..+. +.|..+|+..||+..|++..-+
T Consensus 9 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~ 44 (78)
T d2o7ta1 9 REHIITTTCNLYRTHHHDSLTMENIAEQAGVGVATL 44 (78)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHhCCCHHHH
Confidence 3445555555554 5699999999999999997544
No 158
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=25.76 E-value=23 Score=23.30 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 339 KNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 339 ~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
++|.+..+.-+. +.|..+|+..||+..|+|..-+
T Consensus 6 ~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~i 40 (75)
T d2id6a1 6 DAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLI 40 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHTCCTHHH
T ss_pred HHHHHHHHHHHHHhCccccCHHHHHHHhCCCHHHH
Confidence 445455555454 4699999999999999998554
No 159
>d1utga_ a.101.1.1 (A:) Uteroglobin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=25.43 E-value=84 Score=20.50 Aligned_cols=40 Identities=13% Similarity=0.102 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHhHHhhcCChhHHHHHHHHH
Q 014143 295 ILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLL 338 (430)
Q Consensus 295 ~~~l~~L~~af~~~dl~~f~~~l~~~~~~l~~D~~l~~~~~~L~ 338 (430)
.|++...++.|-.|.-.+|...++. +..||.+.+....|.
T Consensus 3 CPa~~~~v~~fl~GT~eeY~~~vk~----y~~~~~~le~~~~lK 42 (70)
T d1utga_ 3 CPRFAHVIENLLLGTPSSYETSLKE----FEPDDTMKDAGMQMK 42 (70)
T ss_dssp CHHHHHHHHHHHHSCHHHHHHHHHT----TCCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCHHHHHHHHHc----cCCCHHHHHHHHHHH
Confidence 4778889999999999999998887 455676655444443
No 160
>d1ldda_ a.4.5.34 (A:) Anaphase promoting complex (APC) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.88 E-value=38 Score=22.59 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=25.5
Q ss_pred cccccchhhHHhHhC-----------CChHHHHHHHHHhhhcCcee
Q 014143 352 PYTRIRIPFISKELN-----------VPEKDVEQLLVSLILDNRID 386 (430)
Q Consensus 352 ~Y~~I~l~~lA~~l~-----------l~~~evE~~l~~lI~~g~i~ 386 (430)
.+.++.+++|...+. .+.++++..|.+++.+|++.
T Consensus 19 N~~slpleRIh~mLkmfv~~~~~~~~~t~~eL~~FL~~~V~e~kL~ 64 (74)
T d1ldda_ 19 NLGAMKLHKIHSFLKITVPKDWGYNRITLQQLEGYLNTLADEGRLK 64 (74)
T ss_dssp HHCSEEHHHHHHHHHHHSCGGGCCTTCCHHHHHHHHHHHHHTTSEE
T ss_pred cCCCCCHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHhcCceE
Confidence 345666777666543 34579999999999999874
No 161
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=24.88 E-value=42 Score=21.81 Aligned_cols=35 Identities=3% Similarity=-0.061 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhc-ccccccchhhHHhHhCCChH
Q 014143 336 DLLKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEK 370 (430)
Q Consensus 336 ~L~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ 370 (430)
.-+++|.+..+..+. ..|..+|+..||+..|++..
T Consensus 7 ~~r~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~ 42 (76)
T d2fd5a1 7 QTRARILGAATQALLERGAVEPSVGEVMGAAGLTVG 42 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcccccHHHHHHHhCCCcc
Confidence 345566666665555 46999999999999999863
No 162
>d2fswa1 a.4.5.69 (A:3-104) Hypothetical protein PG0823 {Porphyromonas gingivalis [TaxId: 837]}
Probab=24.69 E-value=97 Score=21.57 Aligned_cols=64 Identities=16% Similarity=0.025 Sum_probs=46.2
Q ss_pred cccchhhHHhHh-CCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCC----ccchHHHHHHHHHHH
Q 014143 354 TRIRIPFISKEL-NVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRS----KGMKKYTAIDKWNSQ 417 (430)
Q Consensus 354 ~~I~l~~lA~~l-~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~----~~~~~~~~l~~w~~~ 417 (430)
....|++|.+.+ |++..-+-.-|..|..+|.|.-+.++....-+-+.-. .-......+.+|+.+
T Consensus 32 g~~rF~el~~~l~gIs~~~Ls~rLkeL~~~glv~r~~~~~~p~~veY~LT~~G~~L~pil~~l~~Wg~~ 100 (102)
T d2fswa1 32 RIIRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVLPIIDEIAKFGME 100 (102)
T ss_dssp SCEEHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhhCcccchhHHHHHHHHHHHCCceeecccCCCCCeehhhhhHhHHHHHHHHHHHHHHHHH
Confidence 457899999998 8999999999999999999988776655422222211 112356777888753
No 163
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=24.47 E-value=24 Score=25.40 Aligned_cols=31 Identities=13% Similarity=0.013 Sum_probs=27.2
Q ss_pred ccccccchhhHHhHhCCChHHHHHHHHHhhh
Q 014143 351 KPYTRIRIPFISKELNVPEKDVEQLLVSLIL 381 (430)
Q Consensus 351 ~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~ 381 (430)
..|.-.|.+.||+.+|+|..-|...+.++..
T Consensus 28 ~y~~~ls~~EIA~~lgiS~~aV~~~l~RA~~ 58 (106)
T d1s7oa_ 28 YYADDYSLAEIADEFGVSRQAVYDNIKRTEK 58 (106)
T ss_dssp HHHTCCCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 4578899999999999999999999888764
No 164
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.27 E-value=23 Score=22.59 Aligned_cols=23 Identities=9% Similarity=0.154 Sum_probs=18.7
Q ss_pred cccchhhHHhHhCCChHHHHHHH
Q 014143 354 TRIRIPFISKELNVPEKDVEQLL 376 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l 376 (430)
+.+|+.+||+..|++..-|-..|
T Consensus 1 k~~Ti~diA~~agvS~sTVSr~l 23 (59)
T d1efaa1 1 KPVTLYDVAEYAGVSYQTVSRVV 23 (59)
T ss_dssp CCCCHHHHHHTTTSCHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHH
Confidence 36899999999999987665544
No 165
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=24.18 E-value=36 Score=22.18 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|..-.+..+. ..|..+|+..||+..|++..-+
T Consensus 7 r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~ 42 (75)
T d2hyja1 7 RGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGV 42 (75)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHhCcccCcHHHHHHHHCcCHHHH
Confidence 4455555555554 4599999999999999997543
No 166
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.77 E-value=43 Score=21.01 Aligned_cols=28 Identities=18% Similarity=0.287 Sum_probs=23.4
Q ss_pred ccc-cccchhhHHhHhCCChHHHHHHHHH
Q 014143 351 KPY-TRIRIPFISKELNVPEKDVEQLLVS 378 (430)
Q Consensus 351 ~~Y-~~I~l~~lA~~l~l~~~evE~~l~~ 378 (430)
.+| +.-....||+.+|+++..|..|..+
T Consensus 24 ~~yPs~~~~~~LA~~lgls~~qV~~WFqN 52 (59)
T d2cqxa1 24 TKYPDEKRLKGLSKQLDWSVRKIQCWFRH 52 (59)
T ss_dssp CSSCCHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHCcCHHHHHHHHHh
Confidence 356 7778899999999999999988654
No 167
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=23.67 E-value=1.1e+02 Score=21.37 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=32.8
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEeee
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHID 390 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~ID 390 (430)
...+..+||+.+|++..-+-..|..|...|.|..+=+
T Consensus 44 ~~~~v~ela~~l~~s~s~vS~HL~~L~~aGlv~~~r~ 80 (108)
T d1u2wa1 44 EELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKE 80 (108)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC--
T ss_pred CCccHHHHHHHHccChhHHHHHHHHHHHCCeeEEEEE
Confidence 5688999999999999999999999999999988744
No 168
>d2vkva1 a.4.1.9 (A:6-67) Tetracyclin repressor (Tet-repressor, TetR) {Escherichia coli [TaxId: 562]}
Probab=23.24 E-value=20 Score=22.63 Aligned_cols=33 Identities=12% Similarity=0.043 Sum_probs=23.8
Q ss_pred HHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 340 NVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 340 ~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+|..-++..+. +.|..+|+..||+..|++..-+
T Consensus 3 ~Il~aA~~l~~~~G~~~~s~~~Ia~~agvs~~ti 36 (62)
T d2vkva1 3 KVINSALELGNEVGIEGLTTRKLAQKLGVEQPTL 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHhCcccCCHHHHHHHhCCCHHHH
Confidence 34444444444 4589999999999999997544
No 169
>d1ccda_ a.101.1.1 (A:) Clara cell 17kDa protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.19 E-value=88 Score=20.81 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=31.1
Q ss_pred chHHHHHHHHHHhhCCHHHHHHHHHHhHHhhcCChhHHHHHHHHH
Q 014143 294 EILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLL 338 (430)
Q Consensus 294 ~~~~l~~L~~af~~~dl~~f~~~l~~~~~~l~~D~~l~~~~~~L~ 338 (430)
..|++...++.|-.|.-.+|...++. +..||.+.+....|.
T Consensus 4 iCPa~~~~V~~fl~GT~eeY~~~vk~----y~~d~~~lea~~~LK 44 (77)
T d1ccda_ 4 ICPGFLQVLEALLLGSESNYEAALKP----FNPASDLQNAGTQLK 44 (77)
T ss_dssp SCHHHHHHHHHHTTSCHHHHHHHHTT----TCCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHcCCHHHHHHHHHc----cCCCHHHHHHHHHHH
Confidence 46788899999999999999998877 455676655444443
No 170
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]}
Probab=23.10 E-value=1.8e+02 Score=23.37 Aligned_cols=60 Identities=12% Similarity=0.012 Sum_probs=42.0
Q ss_pred hcCHHHHHHHHHHHHhhhccCC---CchhHHHHHHhhhHhhhhhhcHHHHHHHHHHHHHhhhh
Q 014143 195 TKNNKKLKQLYQKALAIKSAIP---HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (430)
Q Consensus 195 ~~d~~ka~~~l~~a~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~y~~A~~~f~ea~~~~~~ 254 (430)
.+...+|..+|..|..+...-. ||-..|..--++-.+|-..++-..|+..--.+.++|++
T Consensus 136 ~~~~~~a~~aY~~A~~ia~~~l~pt~PirLGLaLN~SVF~yEi~~~~~~A~~lAk~A~~~fde 198 (220)
T d2o8pa1 136 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILEL 198 (220)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4677899999999977654422 57666765556666666778888888877777555553
No 171
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=22.98 E-value=42 Score=21.46 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 339 KNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 339 ~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
++|..-.+..+. ..|..+++..||+..|++..-+
T Consensus 5 ~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~~ 39 (68)
T d2d6ya1 5 ARIFEAAVAEFARHGIAGARIDRIAAEARANKQLI 39 (68)
T ss_dssp HHHHHHHHHHHHHHTTTSCCHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHhCccccCHHHHHHHHCcchhHH
Confidence 445555555554 5699999999999999998544
No 172
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=22.96 E-value=78 Score=21.71 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=32.0
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEe
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGH 388 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~ 388 (430)
...+..+||+.+|++..-+-..|..|-..|.+..+
T Consensus 30 ~~~~v~el~~~l~~s~~~vS~HL~~L~~~glv~~~ 64 (94)
T d1r1ua_ 30 SEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAK 64 (94)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCccHHHHHHHHCCCHHHHHHHHHHHHHCCceEEE
Confidence 34678999999999999999999999999999886
No 173
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=22.67 E-value=1e+02 Score=23.76 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=32.0
Q ss_pred cccchhhHHhHhCCChHHHHHHHHHhhhcCceeEe
Q 014143 354 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGH 388 (430)
Q Consensus 354 ~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g~ 388 (430)
...+...||+.+|+|..-|-..|-.|-..|.|...
T Consensus 31 ~~~s~~ela~~lg~s~~~v~~hl~~L~~~glv~~~ 65 (190)
T d1ulya_ 31 KEMTISQLSEILGKTPQTIYHHIEKLKEAGLVEVK 65 (190)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEE
Confidence 45789999999999999999999999999999654
No 174
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.57 E-value=23 Score=22.45 Aligned_cols=22 Identities=9% Similarity=0.197 Sum_probs=18.3
Q ss_pred cchhhHHhHhCCChHHHHHHHH
Q 014143 356 IRIPFISKELNVPEKDVEQLLV 377 (430)
Q Consensus 356 I~l~~lA~~l~l~~~evE~~l~ 377 (430)
|+|.+||+..|++..-|-..|-
T Consensus 1 vTl~diA~~agvS~sTVSrvLn 22 (59)
T d1uxda_ 1 MKLDEIARLAGVSRTTASYVIN 22 (59)
T ss_dssp CCHHHHHHHHTSCTTHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHc
Confidence 6899999999999887766554
No 175
>d1l8qa1 a.4.12.2 (A:290-399) Chromosomal replication initiation factor DnaA C-terminal domain IV {Aquifex aeolicus [TaxId: 63363]}
Probab=22.55 E-value=43 Score=24.05 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=28.2
Q ss_pred HHHHHHhhCCHHHHHHHHHHhHHhhcCChhHHHHHHHHHHHHHHH
Q 014143 300 NLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQ 344 (430)
Q Consensus 300 ~L~~af~~~dl~~f~~~l~~~~~~l~~D~~l~~~~~~L~~~i~~~ 344 (430)
.+...|.++|-......+......+..|+.+...++.|.+++..+
T Consensus 64 ~IG~~fg~rdHsTV~~a~kki~~~~~~D~~l~~~v~~i~~ki~~~ 108 (110)
T d1l8qa1 64 EIARAFKRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQAFDK 108 (110)
T ss_dssp HHHHHSSCCCSTHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh
Confidence 344445445544444555556666888999999999988887654
No 176
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=22.25 E-value=32 Score=24.68 Aligned_cols=31 Identities=13% Similarity=-0.022 Sum_probs=26.9
Q ss_pred ccccccchhhHHhHhCCChHHHHHHHHHhhh
Q 014143 351 KPYTRIRIPFISKELNVPEKDVEQLLVSLIL 381 (430)
Q Consensus 351 ~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~ 381 (430)
..|.-.|++.||+.+|+|..-|...+.++..
T Consensus 30 ~~~e~ls~~EIA~~lgiS~~aV~~~l~Ra~~ 60 (106)
T d1xsva_ 30 FYLEDYSLSEIADTFNVSRQAVYDNIRRTGD 60 (106)
T ss_dssp HHTSCCCHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHhCCcHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 4568899999999999999999998888654
No 177
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=21.59 E-value=89 Score=21.31 Aligned_cols=48 Identities=10% Similarity=0.153 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhcccccccchhhHHhHhCCChHHHHHHHHHhhhcCceeE
Q 014143 339 KNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDG 387 (430)
Q Consensus 339 ~~i~~~~l~~i~~~Y~~I~l~~lA~~l~l~~~evE~~l~~lI~~g~i~g 387 (430)
....+..+...+.. ..++++.||+.+|++++-++.++.-+..-|.+.-
T Consensus 25 ~~aveL~ifd~L~~-gp~t~~eLA~~~g~~~~~l~rLlr~L~a~gll~~ 72 (92)
T d1qzza1 25 RVAATLRLVDHLLA-GADTLAGLADRTDTHPQALSRLVRHLTVVGVLEG 72 (92)
T ss_dssp HHHHHTTHHHHHHT-TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC
T ss_pred HHHHHcCchHHHhC-CCCCHHHHHHHHCcCchHHHHHHHHHHHCCCeee
Confidence 33445555555432 5799999999999999999999999999998853
No 178
>d1z7ua1 a.4.5.69 (A:1-108) Hypothetical protein EF0647 {Enterococcus faecalis [TaxId: 1351]}
Probab=21.26 E-value=1.2e+02 Score=21.41 Aligned_cols=65 Identities=8% Similarity=0.029 Sum_probs=46.4
Q ss_pred cccchhhHHhHh-CCChHHHHHHHHHhhhcCceeEeeeccCCEEEEccCC----ccchHHHHHHHHHHHH
Q 014143 354 TRIRIPFISKEL-NVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRS----KGMKKYTAIDKWNSQL 418 (430)
Q Consensus 354 ~~I~l~~lA~~l-~l~~~evE~~l~~lI~~g~i~g~IDq~~g~v~~~~~~----~~~~~~~~l~~w~~~v 418 (430)
-.-.|++|...+ |++..-+-.-|..|..+|.|.-+.+.....-+.+.-. ........+.+|+++-
T Consensus 31 g~~RF~el~~~l~gIS~~~Ls~rLk~L~~~glv~R~~~~~~p~~veY~LT~~G~~L~pil~~l~~W~~~~ 100 (108)
T d1z7ua1 31 GTKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPEGYALYDALSSLCHWGETF 100 (108)
T ss_dssp SCBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHCcCCChhHHHHHHHHHHHCCcceeeccCCCcceehhhhchhHHHHHHHHHHHHHHHHHH
Confidence 456799999998 7999999999999999999987766554422222221 1113467888898653
No 179
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=20.56 E-value=59 Score=21.01 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhc-ccccccchhhHHhHhCCChHHH
Q 014143 338 LKNVRTQVLLKLI-KPYTRIRIPFISKELNVPEKDV 372 (430)
Q Consensus 338 ~~~i~~~~l~~i~-~~Y~~I~l~~lA~~l~l~~~ev 372 (430)
+++|..-++..+. +.|..+|+..||+..|++..-+
T Consensus 6 r~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~~ 41 (73)
T d2fx0a1 6 MENILKAAKKKFGERGYEGTSIQEIAKEAKVNVAMA 41 (73)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHhCcccCcHHHHHHHHCcChhHH
Confidence 4555555555554 5699999999999999998544
No 180
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=20.05 E-value=1.9e+02 Score=22.62 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhhHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHH
Q 014143 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYR----LGKYKEMMDAYREMLTY 83 (430)
Q Consensus 29 ~~~~~~Ai~~~~~ii~~~~~~~~~~~k~l~~l~~l~~~----~~~~~~l~e~~~~l~~~ 83 (430)
+.|+++|++.|++..+.. + ..+...++.+|.. ..++..+..++......
T Consensus 15 ~~d~~~A~~~~~kAa~~g--~----~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~ 67 (265)
T d1ouva_ 15 EKDFTQAKKYFEKACDLK--E----NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 67 (265)
T ss_dssp TTCHHHHHHHHHHHHHTT--C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHCC--C----HHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc
Confidence 468999999999986542 2 4678889999988 67888888888776553
Done!