Query 014145
Match_columns 430
No_of_seqs 169 out of 2237
Neff 9.5
Searched_HMMs 13730
Date Mon Mar 25 06:16:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014145.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014145hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.7 1E-15 7.3E-20 146.1 22.7 145 220-392 238-382 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.6 1.5E-14 1.1E-18 137.7 22.5 269 40-368 56-382 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.6 8.1E-14 5.9E-18 128.7 20.7 113 40-176 22-134 (305)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 2E-14 1.4E-18 133.5 13.3 108 51-177 50-160 (313)
5 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 3.5E-14 2.5E-18 131.8 10.4 120 42-181 67-188 (313)
6 d2astb2 c.10.1.3 (B:2136-2419) 99.5 9.9E-15 7.2E-19 133.7 5.7 191 76-311 43-235 (284)
7 d1xkua_ c.10.2.7 (A:) Decorin 99.5 1.5E-12 1.1E-16 120.0 19.4 234 38-312 41-283 (305)
8 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 1.5E-13 1.1E-17 121.3 11.7 184 77-309 39-225 (227)
9 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 1.7E-12 1.3E-16 118.4 19.1 198 80-312 33-236 (284)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.4 4.3E-12 3.1E-16 114.6 18.0 81 79-177 31-111 (266)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 3.7E-12 2.7E-16 116.2 16.8 208 40-286 23-236 (284)
12 d1p9ag_ c.10.2.7 (G:) von Will 99.4 6.9E-12 5E-16 113.2 17.9 192 78-312 9-206 (266)
13 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 4.4E-12 3.2E-16 111.6 15.6 185 49-284 39-226 (227)
14 d1jl5a_ c.10.2.6 (A:) Leucine 99.3 7.7E-11 5.6E-15 109.9 23.3 114 51-198 38-153 (353)
15 d2astb2 c.10.1.3 (B:2136-2419) 99.3 1.2E-13 8.6E-18 126.4 3.3 217 48-317 43-261 (284)
16 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 1.6E-11 1.2E-15 108.9 15.9 94 40-149 20-113 (242)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 5.1E-11 3.7E-15 105.6 17.5 87 78-177 28-114 (242)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.3 6.7E-12 4.8E-16 108.2 10.6 162 77-306 38-199 (199)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 2.4E-11 1.7E-15 105.5 13.7 165 77-309 44-208 (210)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.2 3.8E-11 2.8E-15 104.2 14.0 165 50-284 45-209 (210)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.2 6.5E-11 4.7E-15 101.8 14.5 163 102-338 37-199 (199)
22 d1jl5a_ c.10.2.6 (A:) Leucine 99.2 1E-09 7.6E-14 102.0 22.3 282 39-390 49-351 (353)
23 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 6.5E-09 4.8E-13 85.7 7.5 108 49-177 16-123 (162)
24 d1a9na_ c.10.2.4 (A:) Spliceso 98.7 3.2E-08 2.3E-12 81.5 9.7 83 220-308 60-146 (162)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.7 3.8E-08 2.8E-12 83.4 9.5 119 39-177 19-137 (192)
26 d1dcea3 c.10.2.2 (A:444-567) R 98.7 7.1E-08 5.1E-12 75.5 10.3 14 102-115 17-30 (124)
27 d1dcea3 c.10.2.2 (A:444-567) R 98.6 8.7E-08 6.3E-12 75.0 9.3 101 54-177 1-101 (124)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.5 3.4E-07 2.5E-11 77.4 11.5 108 54-183 11-118 (192)
29 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.3 3.9E-08 2.9E-12 94.3 1.2 187 222-422 254-458 (460)
30 d1m9la_ c.10.3.1 (A:) Outer ar 98.2 4.1E-08 3E-12 83.7 -2.3 81 76-176 45-125 (198)
31 d2ifga3 c.10.2.7 (A:36-191) Hi 98.2 3E-06 2.2E-10 68.7 9.1 15 101-115 52-66 (156)
32 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.1 9.3E-07 6.8E-11 81.7 6.1 104 40-150 20-132 (344)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.1 2.9E-06 2.1E-10 68.9 7.9 95 40-150 20-114 (156)
34 d1m9la_ c.10.3.1 (A:) Outer ar 98.1 2.5E-08 1.8E-12 85.0 -5.1 116 39-177 36-151 (198)
35 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.1 1E-07 7.5E-12 91.2 -1.7 324 51-393 2-407 (460)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.9 1.1E-06 7.8E-11 81.3 2.2 71 101-177 27-104 (344)
37 d1koha1 c.10.2.3 (A:201-362) m 95.7 0.0015 1.1E-07 52.5 1.4 37 78-115 64-101 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 94.6 0.0026 1.9E-07 51.0 -0.2 65 48-116 62-126 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 93.1 0.031 2.2E-06 44.6 3.8 14 103-116 13-26 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 92.6 0.021 1.5E-06 45.6 1.9 66 219-285 40-110 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 90.8 0.038 2.8E-06 43.8 1.7 91 219-310 42-141 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 90.2 0.035 2.6E-06 44.1 0.9 63 221-284 72-141 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1e-15 Score=146.09 Aligned_cols=145 Identities=14% Similarity=0.204 Sum_probs=82.7
Q ss_pred CCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEccCCCcccccCchhhcc
Q 014145 220 VAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSKCHGLINVLTLSTSES 299 (430)
Q Consensus 220 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~ 299 (430)
..+++|+.|+++++ .++.+.. + ..+++|+.|+++++. +..++ .+..++.++.+.+..+. +..+. ....
T Consensus 238 ~~l~~L~~L~l~~n-~l~~~~~--~---~~~~~L~~L~l~~~~-l~~~~-~~~~~~~l~~l~~~~n~-l~~~~---~~~~ 305 (384)
T d2omza2 238 ASLTNLTDLDLANN-QISNLAP--L---SGLTKLTELKLGANQ-ISNIS-PLAGLTALTNLELNENQ-LEDIS---PISN 305 (384)
T ss_dssp GGCTTCSEEECCSS-CCCCCGG--G---TTCTTCSEEECCSSC-CCCCG-GGTTCTTCSEEECCSSC-CSCCG---GGGG
T ss_pred hcccccchhccccC-ccCCCCc--c---cccccCCEeeccCcc-cCCCC-ccccccccccccccccc-ccccc---ccch
Confidence 45566666666664 3433321 1 455666666666543 33332 23455566666666542 33332 2455
Q ss_pred ccccceEeeccccccchhhcccccccCCcceeecccceEeccCCCCCceeccCCcccCCCCccEEeeccCCCCcccCCCC
Q 014145 300 LVNLGRMKIADCKMIEQIIQLQVGEEAKGCVVFEELGYLGLDCLPSLTSFCLGNYALEFPSLEHVVVRQCPTMKIFSQGV 379 (430)
Q Consensus 300 l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~ 379 (430)
++.++.|+++++ .+.++. ....+++|++|++++| .+++++. ...+++|++|++++| +++.++. +
T Consensus 306 ~~~l~~L~ls~n-~l~~l~---------~l~~l~~L~~L~L~~n-~l~~l~~---l~~l~~L~~L~l~~N-~l~~l~~-l 369 (384)
T d2omza2 306 LKNLTYLTLYFN-NISDIS---------PVSSLTKLQRLFFANN-KVSDVSS---LANLTNINWLSAGHN-QISDLTP-L 369 (384)
T ss_dssp CTTCSEEECCSS-CCSCCG---------GGGGCTTCCEEECCSS-CCCCCGG---GGGCTTCCEEECCSS-CCCBCGG-G
T ss_pred hcccCeEECCCC-CCCCCc---------ccccCCCCCEEECCCC-CCCCChh---HcCCCCCCEEECCCC-cCCCChh-h
Confidence 667777777765 344432 1223778888888877 5666542 234778888888765 4555543 4
Q ss_pred cCCCCceeeeccc
Q 014145 380 VDAPKLNKVKPTE 392 (430)
Q Consensus 380 ~~~~~L~~l~l~~ 392 (430)
..+++|+.|++.+
T Consensus 370 ~~l~~L~~L~L~~ 382 (384)
T d2omza2 370 ANLTRITQLGLND 382 (384)
T ss_dssp TTCTTCSEEECCC
T ss_pred ccCCCCCEeeCCC
Confidence 5677888887743
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=1.5e-14 Score=137.68 Aligned_cols=269 Identities=13% Similarity=0.216 Sum_probs=165.0
Q ss_pred hhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCcc
Q 014145 40 IQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLE 119 (430)
Q Consensus 40 ~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~ 119 (430)
++++ .++..+++|++|+++++. ++.++. ...+++|++|++++|. +..+.+ +..+++|+.|+++++. +.
T Consensus 56 I~~l-~gl~~L~nL~~L~Ls~N~-l~~l~~-----l~~L~~L~~L~L~~n~-i~~i~~---l~~l~~L~~L~~~~~~-~~ 123 (384)
T d2omza2 56 IKSI-DGVEYLNNLTQINFSNNQ-LTDITP-----LKNLTKLVDILMNNNQ-IADITP---LANLTNLTGLTLFNNQ-IT 123 (384)
T ss_dssp CCCC-TTGGGCTTCCEEECCSSC-CCCCGG-----GTTCTTCCEEECCSSC-CCCCGG---GTTCTTCCEEECCSSC-CC
T ss_pred CCCc-cccccCCCCCEEeCcCCc-CCCCcc-----ccCCcccccccccccc-cccccc---cccccccccccccccc-cc
Confidence 4444 456778899999998876 776432 2578889999998874 555433 4578889999887763 22
Q ss_pred Eecccccc-------------cCC-----------------------------------------ccCcCCcCCccceee
Q 014145 120 EVLHLEEL-------------NAD-----------------------------------------KEHIGPLFPKLFELT 145 (430)
Q Consensus 120 ~~~~~~~~-------------~~~-----------------------------------------~~~l~~~l~~L~~L~ 145 (430)
.+...... ... .......+++++.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 203 (384)
T d2omza2 124 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLI 203 (384)
T ss_dssp CCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceee
Confidence 21110000 000 000112334444444
Q ss_pred cCCccccccccCCccccccCCCccEEEeccCCCccccc----CCCceEEEecCCCCCcccCCCceeeecCcccccccCCC
Q 014145 146 LMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFI----SNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVA 221 (430)
Q Consensus 146 l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~----~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 221 (430)
+.++ .+..++. ...+++|++|.+.++. ++.++ .++++.+++.+|.+.++. ....
T Consensus 204 l~~n-~i~~~~~----~~~~~~L~~L~l~~n~-l~~~~~l~~l~~L~~L~l~~n~l~~~~----------------~~~~ 261 (384)
T d2omza2 204 ATNN-QISDITP----LGILTNLDELSLNGNQ-LKDIGTLASLTNLTDLDLANNQISNLA----------------PLSG 261 (384)
T ss_dssp CCSS-CCCCCGG----GGGCTTCCEEECCSSC-CCCCGGGGGCTTCSEEECCSSCCCCCG----------------GGTT
T ss_pred ccCC-ccCCCCc----ccccCCCCEEECCCCC-CCCcchhhcccccchhccccCccCCCC----------------cccc
Confidence 4442 2222211 2334455555555443 33322 344555555555444322 3567
Q ss_pred CCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEccCCCcccccCchhhcccc
Q 014145 222 FPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSKCHGLINVLTLSTSESLV 301 (430)
Q Consensus 222 ~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~ 301 (430)
+++|++|+++++ .+..+.. + ..++.++.+.+..+. +..++ .+..+++++.|+++++ .+.+++. +..++
T Consensus 262 ~~~L~~L~l~~~-~l~~~~~--~---~~~~~l~~l~~~~n~-l~~~~-~~~~~~~l~~L~ls~n-~l~~l~~---l~~l~ 329 (384)
T d2omza2 262 LTKLTELKLGAN-QISNISP--L---AGLTALTNLELNENQ-LEDIS-PISNLKNLTYLTLYFN-NISDISP---VSSLT 329 (384)
T ss_dssp CTTCSEEECCSS-CCCCCGG--G---TTCTTCSEEECCSSC-CSCCG-GGGGCTTCSEEECCSS-CCSCCGG---GGGCT
T ss_pred cccCCEeeccCc-ccCCCCc--c---ccccccccccccccc-ccccc-ccchhcccCeEECCCC-CCCCCcc---cccCC
Confidence 889999999885 4544322 2 677889999998864 44442 4668899999999987 5666653 67899
Q ss_pred ccceEeeccccccchhhcccccccCCcceeecccceEeccCCCCCceeccCCcccCCCCccEEeecc
Q 014145 302 NLGRMKIADCKMIEQIIQLQVGEEAKGCVVFEELGYLGLDCLPSLTSFCLGNYALEFPSLEHVVVRQ 368 (430)
Q Consensus 302 ~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~~~~L~~L~l~~ 368 (430)
+|++|++++| .++++. ....+++|++|+++++ .++++.. ...+++|++|++++
T Consensus 330 ~L~~L~L~~n-~l~~l~---------~l~~l~~L~~L~l~~N-~l~~l~~---l~~l~~L~~L~L~~ 382 (384)
T d2omza2 330 KLQRLFFANN-KVSDVS---------SLANLTNINWLSAGHN-QISDLTP---LANLTRITQLGLND 382 (384)
T ss_dssp TCCEEECCSS-CCCCCG---------GGGGCTTCCEEECCSS-CCCBCGG---GTTCTTCSEEECCC
T ss_pred CCCEEECCCC-CCCCCh---------hHcCCCCCCEEECCCC-cCCCChh---hccCCCCCEeeCCC
Confidence 9999999998 455543 1223899999999986 6777653 34589999999976
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.57 E-value=8.1e-14 Score=128.73 Aligned_cols=113 Identities=18% Similarity=0.239 Sum_probs=65.6
Q ss_pred hhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCcc
Q 014145 40 IQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLE 119 (430)
Q Consensus 40 ~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~ 119 (430)
+.++|.++ .+++++|+++++. ++.++... + ..+++|++|++++|. +..+.+. .++++++|++|++++| .++
T Consensus 22 L~~lP~~l--~~~l~~L~Ls~N~-i~~l~~~~-f--~~l~~L~~L~l~~n~-~~~i~~~-~f~~l~~L~~L~l~~n-~l~ 92 (305)
T d1xkua_ 22 LEKVPKDL--PPDTALLDLQNNK-ITEIKDGD-F--KNLKNLHTLILINNK-ISKISPG-AFAPLVKLERLYLSKN-QLK 92 (305)
T ss_dssp CCSCCCSC--CTTCCEEECCSSC-CCCBCTTT-T--TTCTTCCEEECCSSC-CCCBCTT-TTTTCTTCCEEECCSS-CCS
T ss_pred CCccCCCC--CCCCCEEECcCCc-CCCcChhH-h--hcccccccccccccc-ccccchh-hhhCCCccCEecccCC-ccC
Confidence 55666654 2578888888775 76654432 1 457788888888874 4444343 3667888888888887 455
Q ss_pred EecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccC
Q 014145 120 EVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENC 176 (430)
Q Consensus 120 ~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c 176 (430)
.+ |.. ..+.++.|.+.++ .+..++.. .......+..+.+..+
T Consensus 93 ~l---------~~~---~~~~l~~L~~~~n-~l~~l~~~--~~~~~~~~~~l~~~~n 134 (305)
T d1xkua_ 93 EL---------PEK---MPKTLQELRVHEN-EITKVRKS--VFNGLNQMIVVELGTN 134 (305)
T ss_dssp BC---------CSS---CCTTCCEEECCSS-CCCBBCHH--HHTTCTTCCEEECCSS
T ss_pred cC---------ccc---hhhhhhhhhcccc-chhhhhhh--hhhccccccccccccc
Confidence 55 332 2356666666653 33333211 1223445555555444
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.54 E-value=2e-14 Score=133.52 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=79.8
Q ss_pred CCcceeecccccCCe---eeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccc
Q 014145 51 RDIKYLQLGHFPRLQ---EIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEEL 127 (430)
Q Consensus 51 ~~L~~L~l~~~~~l~---~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~ 127 (430)
.+++.|+++++. +. .++... +.+++|++|++++|.++....|.. +.++++|++|++++|. +..+
T Consensus 50 ~~v~~L~L~~~~-l~g~~~lp~~l----~~L~~L~~L~Ls~~N~l~g~iP~~-i~~L~~L~~L~Ls~N~-l~~~------ 116 (313)
T d1ogqa_ 50 YRVNNLDLSGLN-LPKPYPIPSSL----ANLPYLNFLYIGGINNLVGPIPPA-IAKLTQLHYLYITHTN-VSGA------ 116 (313)
T ss_dssp CCEEEEEEECCC-CSSCEECCGGG----GGCTTCSEEEEEEETTEESCCCGG-GGGCTTCSEEEEEEEC-CEEE------
T ss_pred EEEEEEECCCCC-CCCCCCCChHH----hcCccccccccccccccccccccc-cccccccchhhhcccc-cccc------
Confidence 478999998875 43 233333 679999999999876666444544 7789999999999984 5554
Q ss_pred cCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCC
Q 014145 128 NADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCP 177 (430)
Q Consensus 128 ~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~ 177 (430)
+...+..+++|+.+++.++.....+|.. +..+++|+.+.+.++.
T Consensus 117 ---~~~~~~~~~~L~~l~l~~N~~~~~~p~~---l~~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 117 ---IPDFLSQIKTLVTLDFSYNALSGTLPPS---ISSLPNLVGITFDGNR 160 (313)
T ss_dssp ---CCGGGGGCTTCCEEECCSSEEESCCCGG---GGGCTTCCEEECCSSC
T ss_pred ---ccccccchhhhcccccccccccccCchh---hccCcccceeeccccc
Confidence 3344577889999999987666656544 7788888999888775
No 5
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.49 E-value=3.5e-14 Score=131.78 Aligned_cols=120 Identities=14% Similarity=0.143 Sum_probs=87.4
Q ss_pred hhhhcccCCCCcceeecccccCCe-eeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccE
Q 014145 42 KCYEEMIGFRDIKYLQLGHFPRLQ-EIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEE 120 (430)
Q Consensus 42 ~l~~~~~~l~~L~~L~l~~~~~l~-~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~ 120 (430)
.+|.++..+++|++|+++++.++. .++... ..+++|++|+++++. +....+.. +..+.+|+++++++|.....
T Consensus 67 ~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i----~~L~~L~~L~Ls~N~-l~~~~~~~-~~~~~~L~~l~l~~N~~~~~ 140 (313)
T d1ogqa_ 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAI----AKLTQLHYLYITHTN-VSGAIPDF-LSQIKTLVTLDFSYNALSGT 140 (313)
T ss_dssp ECCGGGGGCTTCSEEEEEEETTEESCCCGGG----GGCTTCSEEEEEEEC-CEEECCGG-GGGCTTCCEEECCSSEEESC
T ss_pred CCChHHhcCcccccccccccccccccccccc----ccccccchhhhcccc-cccccccc-ccchhhhccccccccccccc
Confidence 477888999999999999866566 444333 689999999999984 55544443 67899999999999865554
Q ss_pred ecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCc-cEEEeccCCCccc
Q 014145 121 VLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPEL-RYLAIENCPDMET 181 (430)
Q Consensus 121 ~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L-~~L~l~~c~~l~~ 181 (430)
+ |..+ ..+++|+.++++++.....+|.. ...+..+ +.+.+.++. ++.
T Consensus 141 ~---------p~~l-~~l~~L~~l~l~~n~l~~~ip~~---~~~l~~l~~~l~~~~n~-l~~ 188 (313)
T d1ogqa_ 141 L---------PPSI-SSLPNLVGITFDGNRISGAIPDS---YGSFSKLFTSMTISRNR-LTG 188 (313)
T ss_dssp C---------CGGG-GGCTTCCEEECCSSCCEEECCGG---GGCCCTTCCEEECCSSE-EEE
T ss_pred C---------chhh-ccCcccceeeccccccccccccc---ccccccccccccccccc-ccc
Confidence 4 4555 88999999999997655556544 5566665 556665543 443
No 6
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=9.9e-15 Score=133.67 Aligned_cols=191 Identities=16% Similarity=0.182 Sum_probs=122.2
Q ss_pred CCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCccccccc
Q 014145 76 SFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRF 155 (430)
Q Consensus 76 ~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~ 155 (430)
....+|++|++++|. +.......++.++++|++|++++|. +.... +..+ ..+++|++|++++|..+...
T Consensus 43 ~~~~~L~~LdLs~~~-i~~~~l~~l~~~c~~L~~L~L~~~~-l~~~~--------~~~l-~~~~~L~~L~Ls~c~~itd~ 111 (284)
T d2astb2 43 FSPFRVQHMDLSNSV-IEVSTLHGILSQCSKLQNLSLEGLR-LSDPI--------VNTL-AKNSNLVRLNLSGCSGFSEF 111 (284)
T ss_dssp CCCBCCCEEECTTCE-ECHHHHHHHHTTBCCCSEEECTTCB-CCHHH--------HHHH-TTCTTCSEEECTTCBSCCHH
T ss_pred ccCCCCCEEECCCCc-cCHHHHHHHHHhCCCcccccccccC-CCcHH--------HHHH-hcCCCCcCcccccccccccc
Confidence 345689999999874 4433334457889999999999884 32210 1222 56788999999988777543
Q ss_pred cCCccccccCCCccEEEeccCCCcccccCCCceEEEecCCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccCC-
Q 014145 156 CNFTENIIEMPELRYLAIENCPDMETFISNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRLH- 234 (430)
Q Consensus 156 ~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~- 234 (430)
..... ...+++|++|++.+|..+++...... .....++|+.|++++|.
T Consensus 112 ~l~~l-~~~~~~L~~L~ls~c~~~~~~~~~~~------------------------------~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 112 ALQTL-LSSCSRLDELNLSWCFDFTEKHVQVA------------------------------VAHVSETITQLNLSGYRK 160 (284)
T ss_dssp HHHHH-HHHCTTCCEEECCCCTTCCHHHHHHH------------------------------HHHSCTTCCEEECCSCGG
T ss_pred ccchh-hHHHHhccccccccccccccccchhh------------------------------hcccccccchhhhccccc
Confidence 11100 34678888888888876654210000 01234677888887753
Q ss_pred CceeeccCCchhhhhcccccEEEeecCCCcc-cccCCcccCCCCCEEEEccCCCcccccCchhhccccccceEeeccc
Q 014145 235 KVQHLWKENDESNKAFANLIRLKISECSKLQ-KLVTPSWHLENLATLEVSKCHGLINVLTLSTSESLVNLGRMKIADC 311 (430)
Q Consensus 235 ~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~-~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~c 311 (430)
.+++.. .......+++|++|++++|..++ ..+..+..+++|++|++++|..+++.... .++.+|+|++|++.+|
T Consensus 161 ~i~~~~--l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~-~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 161 NLQKSD--LSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLL-ELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GSCHHH--HHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGG-GGGGCTTCCEEECTTS
T ss_pred cccccc--ccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHH-HHhcCCCCCEEeeeCC
Confidence 222211 11112567888888888887665 34455667888999999998887765433 2567888999999887
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.46 E-value=1.5e-12 Score=120.03 Aligned_cols=234 Identities=13% Similarity=0.109 Sum_probs=144.2
Q ss_pred chhhhhhhc-ccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCC
Q 014145 38 STIQKCYEE-MIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCD 116 (430)
Q Consensus 38 ~~~~~l~~~-~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~ 116 (430)
+.++.++.. +..+++|++|+++++. +..+.... ...+++|+.|+++++ ++..++.. ....++.|++.++
T Consensus 41 N~i~~l~~~~f~~l~~L~~L~l~~n~-~~~i~~~~---f~~l~~L~~L~l~~n-~l~~l~~~----~~~~l~~L~~~~n- 110 (305)
T d1xkua_ 41 NKITEIKDGDFKNLKNLHTLILINNK-ISKISPGA---FAPLVKLERLYLSKN-QLKELPEK----MPKTLQELRVHEN- 110 (305)
T ss_dssp SCCCCBCTTTTTTCTTCCEEECCSSC-CCCBCTTT---TTTCTTCCEEECCSS-CCSBCCSS----CCTTCCEEECCSS-
T ss_pred CcCCCcChhHhhcccccccccccccc-ccccchhh---hhCCCccCEecccCC-ccCcCccc----hhhhhhhhhcccc-
Confidence 457777764 5688999999999887 55543222 256899999999998 46665443 3678999999887
Q ss_pred CccEecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCccccc---CCCceEEEec
Q 014145 117 SLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFI---SNSVVHVTTD 193 (430)
Q Consensus 117 ~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~---~~~L~~L~l~ 193 (430)
.+..+ +...+.....+..+....+...... ........+++|+.+.+.++. ++.++ ++++++|+++
T Consensus 111 ~l~~l---------~~~~~~~~~~~~~l~~~~n~~~~~~-~~~~~~~~l~~L~~l~l~~n~-l~~l~~~~~~~L~~L~l~ 179 (305)
T d1xkua_ 111 EITKV---------RKSVFNGLNQMIVVELGTNPLKSSG-IENGAFQGMKKLSYIRIADTN-ITTIPQGLPPSLTELHLD 179 (305)
T ss_dssp CCCBB---------CHHHHTTCTTCCEEECCSSCCCGGG-BCTTGGGGCTTCCEEECCSSC-CCSCCSSCCTTCSEEECT
T ss_pred chhhh---------hhhhhhccccccccccccccccccC-CCccccccccccCccccccCC-ccccCcccCCccCEEECC
Confidence 34444 2222345567777777664332221 122225677888888888775 44443 5567777777
Q ss_pred CCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcccccCCccc
Q 014145 194 NKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWH 273 (430)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~ 273 (430)
++......+ .....++.++.|+++++ .+..+....+ ..+++|++|+++++ .++.+|.++..
T Consensus 180 ~n~~~~~~~--------------~~~~~~~~l~~L~~s~n-~l~~~~~~~~---~~l~~L~~L~L~~N-~L~~lp~~l~~ 240 (305)
T d1xkua_ 180 GNKITKVDA--------------ASLKGLNNLAKLGLSFN-SISAVDNGSL---ANTPHLRELHLNNN-KLVKVPGGLAD 240 (305)
T ss_dssp TSCCCEECT--------------GGGTTCTTCCEEECCSS-CCCEECTTTG---GGSTTCCEEECCSS-CCSSCCTTTTT
T ss_pred CCcCCCCCh--------------hHhhccccccccccccc-cccccccccc---cccccceeeecccc-ccccccccccc
Confidence 666443220 12345567777777764 5666655554 56677777777775 45666666666
Q ss_pred CCCCCEEEEccCCCcccccCchh-----hccccccceEeecccc
Q 014145 274 LENLATLEVSKCHGLINVLTLST-----SESLVNLGRMKIADCK 312 (430)
Q Consensus 274 l~~L~~L~l~~c~~l~~l~~~~~-----~~~l~~L~~L~l~~c~ 312 (430)
+++|+.|+++++ ++++++...+ ....++|+.|++++++
T Consensus 241 l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 241 HKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp CSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 777777777764 4555543211 1223455555555543
No 8
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.46 E-value=1.5e-13 Score=121.27 Aligned_cols=184 Identities=17% Similarity=0.218 Sum_probs=102.3
Q ss_pred CCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCcccccccc
Q 014145 77 FFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFC 156 (430)
Q Consensus 77 ~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~ 156 (430)
.+.+|+.|++.+| ++.++.+ +..+++|++|++++|. +..+ .. +..+++|+.+++.++ .+..++
T Consensus 39 ~l~~L~~L~l~~~-~i~~l~~---l~~l~~L~~L~ls~n~-i~~~----------~~-l~~l~~l~~l~~~~n-~~~~i~ 101 (227)
T d1h6ua2 39 DLDGITTLSAFGT-GVTTIEG---VQYLNNLIGLELKDNQ-ITDL----------AP-LKNLTKITELELSGN-PLKNVS 101 (227)
T ss_dssp HHHTCCEEECTTS-CCCCCTT---GGGCTTCCEEECCSSC-CCCC----------GG-GTTCCSCCEEECCSC-CCSCCG
T ss_pred HcCCcCEEECCCC-CCCcchh---HhcCCCCcEeecCCce-eecc----------cc-ccccccccccccccc-cccccc
Confidence 4667777777776 4555322 4567777777777763 4333 11 266677777777765 333343
Q ss_pred CCccccccCCCccEEEeccCCCccccc---CCCceEEEecCCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccC
Q 014145 157 NFTENIIEMPELRYLAIENCPDMETFI---SNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRL 233 (430)
Q Consensus 157 ~~~~~~~~~~~L~~L~l~~c~~l~~~~---~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 233 (430)
. +..+++|+.+.+.++......+ .+.+..+.+.++.+.... .....++|++|.++++
T Consensus 102 ~----l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------------~~~~~~~L~~L~l~~n 161 (227)
T d1h6ua2 102 A----IAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNIS----------------PLAGLTNLQYLSIGNA 161 (227)
T ss_dssp G----GTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCG----------------GGGGCTTCCEEECCSS
T ss_pred c----ccccccccccccccccccccchhccccchhhhhchhhhhchhh----------------hhcccccccccccccc
Confidence 2 5567777777777665322111 334455555444433221 1234556667766664
Q ss_pred CCceeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEccCCCcccccCchhhccccccceEeec
Q 014145 234 HKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSKCHGLINVLTLSTSESLVNLGRMKIA 309 (430)
Q Consensus 234 ~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~ 309 (430)
.+.... .+ ..+++|++|+++++ .++.++ .+..+++|++|++++| .+++++. ++.+++|++|+++
T Consensus 162 -~~~~~~--~l---~~l~~L~~L~Ls~n-~l~~l~-~l~~l~~L~~L~Ls~N-~lt~i~~---l~~l~~L~~L~ls 225 (227)
T d1h6ua2 162 -QVSDLT--PL---ANLSKLTTLKADDN-KISDIS-PLASLPNLIEVHLKNN-QISDVSP---LANTSNLFIVTLT 225 (227)
T ss_dssp -CCCCCG--GG---TTCTTCCEEECCSS-CCCCCG-GGGGCTTCCEEECTTS-CCCBCGG---GTTCTTCCEEEEE
T ss_pred -ccccch--hh---cccccceecccCCC-ccCCCh-hhcCCCCCCEEECcCC-cCCCCcc---cccCCCCCEEEee
Confidence 232221 12 55666666766665 344443 2456666677776665 4555543 4556666666664
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1.7e-12 Score=118.39 Aligned_cols=198 Identities=16% Similarity=0.128 Sum_probs=114.2
Q ss_pred CcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCccccccccCCc
Q 014145 80 NLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFT 159 (430)
Q Consensus 80 ~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~ 159 (430)
++++|+++++ ++..+++. .+.++++|++|+++++ .+..+ +......++.++.+.+.....+..++..
T Consensus 33 ~~~~L~Ls~N-~i~~i~~~-~f~~l~~L~~L~ls~n-~l~~i---------~~~~~~~~~~~~~l~~~~~~~~~~l~~~- 99 (284)
T d1ozna_ 33 ASQRIFLHGN-RISHVPAA-SFRACRNLTILWLHSN-VLARI---------DAAAFTGLALLEQLDLSDNAQLRSVDPA- 99 (284)
T ss_dssp TCSEEECTTS-CCCEECTT-TTTTCTTCCEEECCSS-CCCEE---------CTTTTTTCTTCCEEECCSCTTCCCCCTT-
T ss_pred CCCEEECcCC-cCCCCCHH-Hhhccccccccccccc-ccccc---------ccccccccccccccccccccccccccch-
Confidence 4455555543 23332222 2444555555555544 23333 2233344445555544444444443221
Q ss_pred cccccCCCccEEEeccCCCccccc------CCCceEEEecCCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccC
Q 014145 160 ENIIEMPELRYLAIENCPDMETFI------SNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRL 233 (430)
Q Consensus 160 ~~~~~~~~L~~L~l~~c~~l~~~~------~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 233 (430)
....+++|++|.+.++. +.... ...|+.++++++.+.++.+ .....+++|++|+++++
T Consensus 100 -~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~--------------~~f~~~~~L~~L~l~~N 163 (284)
T d1ozna_ 100 -TFHGLGRLHTLHLDRCG-LQELGPGLFRGLAALQYLYLQDNALQALPD--------------DTFRDLGNLTHLFLHGN 163 (284)
T ss_dssp -TTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCT--------------TTTTTCTTCCEEECCSS
T ss_pred -hhcccccCCEEecCCcc-cccccccccchhcccchhhhccccccccCh--------------hHhccccchhhcccccC
Confidence 13445555555555544 22111 3345566666666555431 12346778899999885
Q ss_pred CCceeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEccCCCcccccCchhhccccccceEeecccc
Q 014145 234 HKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSKCHGLINVLTLSTSESLVNLGRMKIADCK 312 (430)
Q Consensus 234 ~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~ 312 (430)
+++.+....+ ..+++|+.+.+.++......|..+..+++|++|+++++. +..++.. .++.+++|++|++++.+
T Consensus 164 -~l~~l~~~~f---~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~-i~~~~~~-~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 164 -RISSVPERAF---RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN-LSALPTE-ALAPLRALQYLRLNDNP 236 (284)
T ss_dssp -CCCEECTTTT---TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC-CSCCCHH-HHTTCTTCCEEECCSSC
T ss_pred -cccccchhhh---ccccccchhhhhhccccccChhHhhhhhhcccccccccc-ccccccc-ccccccccCEEEecCCC
Confidence 6788777766 778899999998875555456677788899999998864 5555443 35678889999887643
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=4.3e-12 Score=114.58 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=37.8
Q ss_pred CCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCccccccccCC
Q 014145 79 NNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNF 158 (430)
Q Consensus 79 ~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~ 158 (430)
++++.|+++++ .+..+ +.+.+.++++|++|++++| .++.+ +. +..+++|++|+++++ .+..++..
T Consensus 31 ~~l~~L~Ls~N-~i~~l-~~~~f~~l~~L~~L~L~~N-~l~~l---------~~--~~~l~~L~~L~Ls~N-~l~~~~~~ 95 (266)
T d1p9ag_ 31 KDTTILHLSEN-LLYTF-SLATLMPYTRLTQLNLDRA-ELTKL---------QV--DGTLPVLGTLDLSHN-QLQSLPLL 95 (266)
T ss_dssp TTCCEEECTTS-CCSEE-EGGGGTTCTTCCEEECTTS-CCCEE---------EC--CSCCTTCCEEECCSS-CCSSCCCC
T ss_pred cCCCEEECcCC-cCCCc-CHHHhhccccccccccccc-ccccc---------cc--ccccccccccccccc-cccccccc
Confidence 34555555554 23332 2222445555566665555 34444 11 134555555655553 33333222
Q ss_pred ccccccCCCccEEEeccCC
Q 014145 159 TENIIEMPELRYLAIENCP 177 (430)
Q Consensus 159 ~~~~~~~~~L~~L~l~~c~ 177 (430)
...+++|++|++.++.
T Consensus 96 ---~~~l~~L~~L~l~~~~ 111 (266)
T d1p9ag_ 96 ---GQTLPALTVLDVSFNR 111 (266)
T ss_dssp ---TTTCTTCCEEECCSSC
T ss_pred ---cccccccccccccccc
Confidence 3445555555555543
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=3.7e-12 Score=116.18 Aligned_cols=208 Identities=13% Similarity=0.082 Sum_probs=154.4
Q ss_pred hhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCcc
Q 014145 40 IQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLE 119 (430)
Q Consensus 40 ~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~ 119 (430)
++++|..+. +++++|+|++++ ++.++... + ..+++|++|+++++ ++..+.+ ..+..+..++.+++..+..+.
T Consensus 23 L~~iP~~ip--~~~~~L~Ls~N~-i~~i~~~~-f--~~l~~L~~L~ls~n-~l~~i~~-~~~~~~~~~~~l~~~~~~~~~ 94 (284)
T d1ozna_ 23 LQAVPVGIP--AASQRIFLHGNR-ISHVPAAS-F--RACRNLTILWLHSN-VLARIDA-AAFTGLALLEQLDLSDNAQLR 94 (284)
T ss_dssp CSSCCTTCC--TTCSEEECTTSC-CCEECTTT-T--TTCTTCCEEECCSS-CCCEECT-TTTTTCTTCCEEECCSCTTCC
T ss_pred CCccCCCCC--CCCCEEECcCCc-CCCCCHHH-h--hccccccccccccc-ccccccc-ccccccccccccccccccccc
Confidence 556766543 589999999876 88765443 1 56889999999986 4555433 346678899999988777777
Q ss_pred EecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCccccc------CCCceEEEec
Q 014145 120 EVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFI------SNSVVHVTTD 193 (430)
Q Consensus 120 ~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~------~~~L~~L~l~ 193 (430)
.+ +...+..+++|++|++.++.. ..++.. ....+++|+.+.+.++. ++.++ ...+++|+++
T Consensus 95 ~l---------~~~~~~~l~~L~~L~l~~n~~-~~~~~~--~~~~~~~L~~l~l~~N~-l~~i~~~~f~~~~~L~~L~l~ 161 (284)
T d1ozna_ 95 SV---------DPATFHGLGRLHTLHLDRCGL-QELGPG--LFRGLAALQYLYLQDNA-LQALPDDTFRDLGNLTHLFLH 161 (284)
T ss_dssp CC---------CTTTTTTCTTCCEEECTTSCC-CCCCTT--TTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECC
T ss_pred cc---------cchhhcccccCCEEecCCccc-cccccc--ccchhcccchhhhcccc-ccccChhHhccccchhhcccc
Confidence 76 455568899999999998753 333221 25678899999999875 66654 3578999999
Q ss_pred CCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcccccCCccc
Q 014145 194 NKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWH 273 (430)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~ 273 (430)
+|.+..+.+ .....+++|+.++++++ ++..+.+..+ ..+++|+.|+++++......+..+..
T Consensus 162 ~N~l~~l~~--------------~~f~~l~~L~~l~l~~N-~l~~i~~~~f---~~l~~L~~L~l~~N~i~~~~~~~~~~ 223 (284)
T d1ozna_ 162 GNRISSVPE--------------RAFRGLHSLDRLLLHQN-RVAHVHPHAF---RDLGRLMTLYLFANNLSALPTEALAP 223 (284)
T ss_dssp SSCCCEECT--------------TTTTTCTTCCEEECCSS-CCCEECTTTT---TTCTTCCEEECCSSCCSCCCHHHHTT
T ss_pred cCcccccch--------------hhhccccccchhhhhhc-cccccChhHh---hhhhhccccccccccccccccccccc
Confidence 999876541 23457889999999985 6777777777 88999999999997544433455678
Q ss_pred CCCCCEEEEccCC
Q 014145 274 LENLATLEVSKCH 286 (430)
Q Consensus 274 l~~L~~L~l~~c~ 286 (430)
+++|+.|++++.+
T Consensus 224 ~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 224 LRALQYLRLNDNP 236 (284)
T ss_dssp CTTCCEEECCSSC
T ss_pred ccccCEEEecCCC
Confidence 8999999999853
No 12
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=6.9e-12 Score=113.22 Aligned_cols=192 Identities=16% Similarity=0.086 Sum_probs=129.7
Q ss_pred CCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCccccccccC
Q 014145 78 FNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCN 157 (430)
Q Consensus 78 l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~ 157 (430)
...+...+.++. +++.+ |.++ -++|++|++++| .+..+ |.+.+..+++|++|+++++ .+..++.
T Consensus 9 ~~~~~~v~C~~~-~L~~i-P~~l---p~~l~~L~Ls~N-~i~~l---------~~~~f~~l~~L~~L~L~~N-~l~~l~~ 72 (266)
T d1p9ag_ 9 VASHLEVNCDKR-NLTAL-PPDL---PKDTTILHLSEN-LLYTF---------SLATLMPYTRLTQLNLDRA-ELTKLQV 72 (266)
T ss_dssp STTCCEEECTTS-CCSSC-CSCC---CTTCCEEECTTS-CCSEE---------EGGGGTTCTTCCEEECTTS-CCCEEEC
T ss_pred cCCCeEEEccCC-CCCee-CcCc---CcCCCEEECcCC-cCCCc---------CHHHhhccccccccccccc-ccccccc
Confidence 344445555543 46665 3331 257999999998 57777 5555688999999999996 6777764
Q ss_pred CccccccCCCccEEEeccCCCccccc-----CCCceEEEecCCCCCcccCCCceeeecCcccccccCCCCCCCCEEeccc
Q 014145 158 FTENIIEMPELRYLAIENCPDMETFI-----SNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSR 232 (430)
Q Consensus 158 ~~~~~~~~~~L~~L~l~~c~~l~~~~-----~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 232 (430)
...+++|++|++.++. ++..+ .+.|+.++++++...++.. .....+.+++.|++++
T Consensus 73 ----~~~l~~L~~L~Ls~N~-l~~~~~~~~~l~~L~~L~l~~~~~~~~~~--------------~~~~~l~~l~~L~l~~ 133 (266)
T d1p9ag_ 73 ----DGTLPVLGTLDLSHNQ-LQSLPLLGQTLPALTVLDVSFNRLTSLPL--------------GALRGLGELQELYLKG 133 (266)
T ss_dssp ----CSCCTTCCEEECCSSC-CSSCCCCTTTCTTCCEEECCSSCCCCCCS--------------STTTTCTTCCEEECTT
T ss_pred ----cccccccccccccccc-ccccccccccccccccccccccccceeec--------------cccccccccccccccc
Confidence 4678999999999885 55433 4567788887777555431 1234567788888877
Q ss_pred CCCceeeccCCchhhhhcccccEEEeecCCCcccccC-CcccCCCCCEEEEccCCCcccccCchhhccccccceEeeccc
Q 014145 233 LHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVT-PSWHLENLATLEVSKCHGLINVLTLSTSESLVNLGRMKIADC 311 (430)
Q Consensus 233 ~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~-~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~c 311 (430)
+ .++.+....+ ..+++|+.++++++ .++.++. .+..+++|++|+++++ .++.+|.. +..+++|+.|++++.
T Consensus 134 n-~l~~l~~~~~---~~l~~l~~l~l~~N-~l~~~~~~~~~~l~~L~~L~Ls~N-~L~~lp~~--~~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 134 N-ELKTLPPGLL---TPTPKLEKLSLANN-NLTELPAGLLNGLENLDTLLLQEN-SLYTIPKG--FFGSHLLPFAFLHGN 205 (266)
T ss_dssp S-CCCCCCTTTT---TTCTTCCEEECTTS-CCSCCCTTTTTTCTTCCEEECCSS-CCCCCCTT--TTTTCCCSEEECCSC
T ss_pred c-ccceeccccc---cccccchhcccccc-cccccCccccccccccceeecccC-CCcccChh--HCCCCCCCEEEecCC
Confidence 4 5666655555 66778888888775 4454543 3556778888888875 46676652 445677888887754
Q ss_pred c
Q 014145 312 K 312 (430)
Q Consensus 312 ~ 312 (430)
+
T Consensus 206 p 206 (266)
T d1p9ag_ 206 P 206 (266)
T ss_dssp C
T ss_pred C
Confidence 3
No 13
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.38 E-value=4.4e-12 Score=111.65 Aligned_cols=185 Identities=17% Similarity=0.222 Sum_probs=138.8
Q ss_pred CCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEeccccccc
Q 014145 49 GFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELN 128 (430)
Q Consensus 49 ~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~ 128 (430)
.+.+|+.|++.++. ++.+ .+. ..+++|+.|+++++ .+....+ +..+++|+++++++|. ++.+
T Consensus 39 ~l~~L~~L~l~~~~-i~~l-~~l----~~l~~L~~L~ls~n-~i~~~~~---l~~l~~l~~l~~~~n~-~~~i------- 100 (227)
T d1h6ua2 39 DLDGITTLSAFGTG-VTTI-EGV----QYLNNLIGLELKDN-QITDLAP---LKNLTKITELELSGNP-LKNV------- 100 (227)
T ss_dssp HHHTCCEEECTTSC-CCCC-TTG----GGCTTCCEEECCSS-CCCCCGG---GTTCCSCCEEECCSCC-CSCC-------
T ss_pred HcCCcCEEECCCCC-CCcc-hhH----hcCCCCcEeecCCc-eeecccc---cccccccccccccccc-cccc-------
Confidence 45689999999886 7764 333 67999999999997 4555433 5689999999999883 5554
Q ss_pred CCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCccccc---CCCceEEEecCCCCCcccCCCc
Q 014145 129 ADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFI---SNSVVHVTTDNKEPEKLTSEEN 205 (430)
Q Consensus 129 ~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~---~~~L~~L~l~~~~~~~~~~~~~ 205 (430)
.++ ..+++|+.+.+.++.... +.. ....+.+..+.+..+......+ +.+++.+.+.+|.+....
T Consensus 101 ---~~l-~~l~~L~~l~l~~~~~~~-~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~---- 167 (227)
T d1h6ua2 101 ---SAI-AGLQSIKTLDLTSTQITD-VTP----LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT---- 167 (227)
T ss_dssp ---GGG-TTCTTCCEEECTTSCCCC-CGG----GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG----
T ss_pred ---ccc-cccccccccccccccccc-cch----hccccchhhhhchhhhhchhhhhccccccccccccccccccch----
Confidence 233 678999999999875432 221 4567888899987775332222 678999999998876544
Q ss_pred eeeecCcccccccCCCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEcc
Q 014145 206 FFLTDQIQPLFDEKVAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSK 284 (430)
Q Consensus 206 l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~ 284 (430)
..+.+++|+.|+++++ .++++.. + ..+++|++|++++| .++.++ .+..+++|+.|++++
T Consensus 168 ------------~l~~l~~L~~L~Ls~n-~l~~l~~--l---~~l~~L~~L~Ls~N-~lt~i~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 168 ------------PLANLSKLTTLKADDN-KISDISP--L---ASLPNLIEVHLKNN-QISDVS-PLANTSNLFIVTLTN 226 (227)
T ss_dssp ------------GGTTCTTCCEEECCSS-CCCCCGG--G---GGCTTCCEEECTTS-CCCBCG-GGTTCTTCCEEEEEE
T ss_pred ------------hhcccccceecccCCC-ccCCChh--h---cCCCCCCEEECcCC-cCCCCc-ccccCCCCCEEEeeC
Confidence 3567899999999996 6777532 3 78899999999998 577775 377899999999874
No 14
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.35 E-value=7.7e-11 Score=109.90 Aligned_cols=114 Identities=21% Similarity=0.300 Sum_probs=78.2
Q ss_pred CCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCC
Q 014145 51 RDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNAD 130 (430)
Q Consensus 51 ~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~ 130 (430)
.++++|+++++. ++.+ |. ..++|++|+++++ +++.+ |. .+.+|+.|++++| .+..+
T Consensus 38 ~~l~~LdLs~~~-L~~l------p~-~~~~L~~L~Ls~N-~l~~l-p~----~~~~L~~L~l~~n-~l~~l--------- 93 (353)
T d1jl5a_ 38 RQAHELELNNLG-LSSL------PE-LPPHLESLVASCN-SLTEL-PE----LPQSLKSLLVDNN-NLKAL--------- 93 (353)
T ss_dssp HTCSEEECTTSC-CSCC------CS-CCTTCSEEECCSS-CCSSC-CC----CCTTCCEEECCSS-CCSCC---------
T ss_pred cCCCEEEeCCCC-CCCC------CC-CCCCCCEEECCCC-CCccc-cc----chhhhhhhhhhhc-ccchh---------
Confidence 478999999876 6653 32 4678999999875 67765 33 2678999999987 45444
Q ss_pred ccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCccccc--CCCceEEEecCCCCC
Q 014145 131 KEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFI--SNSVVHVTTDNKEPE 198 (430)
Q Consensus 131 ~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~--~~~L~~L~l~~~~~~ 198 (430)
+ ...+.|++|+++++ .+..+|. ...+++|++|++.++. ++..+ ...+..+.+..+...
T Consensus 94 ~----~lp~~L~~L~L~~n-~l~~lp~----~~~l~~L~~L~l~~~~-~~~~~~~~~~l~~l~~~~~~~~ 153 (353)
T d1jl5a_ 94 S----DLPPLLEYLGVSNN-QLEKLPE----LQNSSFLKIIDVDNNS-LKKLPDLPPSLEFIAAGNNQLE 153 (353)
T ss_dssp C----SCCTTCCEEECCSS-CCSSCCC----CTTCTTCCEEECCSSC-CSCCCCCCTTCCEEECCSSCCS
T ss_pred h----hhcccccccccccc-ccccccc----hhhhccceeecccccc-ccccccccccccchhhcccccc
Confidence 1 11246999999986 5666754 5678899999998876 34333 445666666555533
No 15
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=1.2e-13 Score=126.36 Aligned_cols=217 Identities=17% Similarity=0.129 Sum_probs=131.1
Q ss_pred cCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccc
Q 014145 48 IGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEEL 127 (430)
Q Consensus 48 ~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~ 127 (430)
....+|++|+++++. +....... ....+++|++|++++|. +....+ ..+..+++|++|++++|..++..+ +
T Consensus 43 ~~~~~L~~LdLs~~~-i~~~~l~~--l~~~c~~L~~L~L~~~~-l~~~~~-~~l~~~~~L~~L~Ls~c~~itd~~----l 113 (284)
T d2astb2 43 FSPFRVQHMDLSNSV-IEVSTLHG--ILSQCSKLQNLSLEGLR-LSDPIV-NTLAKNSNLVRLNLSGCSGFSEFA----L 113 (284)
T ss_dssp CCCBCCCEEECTTCE-ECHHHHHH--HHTTBCCCSEEECTTCB-CCHHHH-HHHTTCTTCSEEECTTCBSCCHHH----H
T ss_pred ccCCCCCEEECCCCc-cCHHHHHH--HHHhCCCcccccccccC-CCcHHH-HHHhcCCCCcCccccccccccccc----c
Confidence 355689999999876 43211000 11568999999999984 444223 336678999999999998775421 0
Q ss_pred cCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCC-CcccccCCCceEEEecCCCCCcccCCCce
Q 014145 128 NADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCP-DMETFISNSVVHVTTDNKEPEKLTSEENF 206 (430)
Q Consensus 128 ~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~-~l~~~~~~~L~~L~l~~~~~~~~~~~~~l 206 (430)
..+...+++|++|++++|..+............+++|+.|.+.+|. .+++....
T Consensus 114 ----~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~--------------------- 168 (284)
T d2astb2 114 ----QTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLS--------------------- 168 (284)
T ss_dssp ----HHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHH---------------------
T ss_pred ----chhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccc---------------------
Confidence 1223568999999999987764321111102245789999999874 23321100
Q ss_pred eeecCcccccccCCCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCccc-ccCCcccCCCCCEEEEccC
Q 014145 207 FLTDQIQPLFDEKVAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQK-LVTPSWHLENLATLEVSKC 285 (430)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~-l~~~l~~l~~L~~L~l~~c 285 (430)
.....+++|++|++++|..+++.....+ ..+++|++|++++|..++. .+..+..+++|+.|++++|
T Consensus 169 ----------~l~~~~~~L~~L~L~~~~~itd~~~~~l---~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 169 ----------TLVRRCPNLVHLDLSDSVMLKNDCFQEF---FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp ----------HHHHHCTTCSEEECTTCTTCCGGGGGGG---GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ----------ccccccccccccccccccCCCchhhhhh---cccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 0113467788888877766655333333 5677888888888766542 2334567788888888887
Q ss_pred CCcccccCchhhccccccceEeeccccccchh
Q 014145 286 HGLINVLTLSTSESLVNLGRMKIADCKMIEQI 317 (430)
Q Consensus 286 ~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~ 317 (430)
+.+-........+|.|+ + +|..+..+
T Consensus 236 --~~d~~l~~l~~~lp~L~---i-~~~~ls~~ 261 (284)
T d2astb2 236 --VPDGTLQLLKEALPHLQ---I-NCSHFTTI 261 (284)
T ss_dssp --SCTTCHHHHHHHSTTSE---E-SCCCSCCT
T ss_pred --CCHHHHHHHHHhCcccc---c-cCccCCCC
Confidence 22222111234455554 3 45555444
No 16
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1.6e-11 Score=108.86 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=54.0
Q ss_pred hhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCcc
Q 014145 40 IQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLE 119 (430)
Q Consensus 40 ~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~ 119 (430)
++++|.++ ++++++|+++++. ++.++... + ..+++|++|+++++..... ++...+.++++++++.+..+..+.
T Consensus 20 l~~iP~~l--~~~l~~L~Ls~n~-i~~l~~~~-f--~~l~~L~~L~ls~n~~~~~-i~~~~f~~l~~l~~l~~~~~n~l~ 92 (242)
T d1xwdc1 20 VTEIPSDL--PRNAIELRFVLTK-LRVIQKGA-F--SGFGDLEKIEISQNDVLEV-IEADVFSNLPKLHEIRIEKANNLL 92 (242)
T ss_dssp CSSCCSCS--CSCCSEEEEESCC-CCEECTTT-T--TTCTTCCEEEEESCTTCCE-ECSSSEESCTTCCEEEEECCTTCC
T ss_pred CCCcCCCC--CCCCCEEECcCCc-CCccChhH-h--hccchhhhhhhccccccce-eecccccccccccccccccccccc
Confidence 44555543 2467777777665 66544332 1 3467777777777643222 233235566777777776655555
Q ss_pred EecccccccCCccCcCCcCCccceeecCCc
Q 014145 120 EVLHLEELNADKEHIGPLFPKLFELTLMDL 149 (430)
Q Consensus 120 ~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~ 149 (430)
.. +.+.+..+++|+++++.++
T Consensus 93 ~~---------~~~~~~~l~~L~~l~l~~~ 113 (242)
T d1xwdc1 93 YI---------NPEAFQNLPNLQYLLISNT 113 (242)
T ss_dssp EE---------CTTSEECCTTCCEEEEESC
T ss_pred cc---------ccccccccccccccccchh
Confidence 55 3344466677777777664
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=5.1e-11 Score=105.61 Aligned_cols=87 Identities=21% Similarity=0.233 Sum_probs=54.2
Q ss_pred CCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCccccccccC
Q 014145 78 FNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCN 157 (430)
Q Consensus 78 l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~ 157 (430)
.+++++|+++++ ++..+++ ..+.++++|++|++++|.....+ +.+.+..++.++++.+..+..+..++.
T Consensus 28 ~~~l~~L~Ls~n-~i~~l~~-~~f~~l~~L~~L~ls~n~~~~~i---------~~~~f~~l~~l~~l~~~~~n~l~~~~~ 96 (242)
T d1xwdc1 28 PRNAIELRFVLT-KLRVIQK-GAFSGFGDLEKIEISQNDVLEVI---------EADVFSNLPKLHEIRIEKANNLLYINP 96 (242)
T ss_dssp CSCCSEEEEESC-CCCEECT-TTTTTCTTCCEEEEESCTTCCEE---------CSSSEESCTTCCEEEEECCTTCCEECT
T ss_pred CCCCCEEECcCC-cCCccCh-hHhhccchhhhhhhcccccccee---------ecccccccccccccccccccccccccc
Confidence 457788888776 3554333 33567788888888877655544 344446677777777766555554432
Q ss_pred CccccccCCCccEEEeccCC
Q 014145 158 FTENIIEMPELRYLAIENCP 177 (430)
Q Consensus 158 ~~~~~~~~~~L~~L~l~~c~ 177 (430)
. ....+++|+++.+.++.
T Consensus 97 ~--~~~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 97 E--AFQNLPNLQYLLISNTG 114 (242)
T ss_dssp T--SEECCTTCCEEEEESCC
T ss_pred c--cccccccccccccchhh
Confidence 2 24567777777777654
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.28 E-value=6.7e-12 Score=108.16 Aligned_cols=162 Identities=20% Similarity=0.251 Sum_probs=99.0
Q ss_pred CCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCcccccccc
Q 014145 77 FFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFC 156 (430)
Q Consensus 77 ~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~ 156 (430)
.+++++.|++++| ++.++.. ++.+++|++|++++| .+..+ + + +..+++|++|+++++. +..++
T Consensus 38 ~l~~l~~L~l~~~-~i~~l~~---l~~l~nL~~L~Ls~N-~l~~~---------~-~-l~~l~~L~~L~l~~n~-~~~~~ 100 (199)
T d2omxa2 38 DLDQVTTLQADRL-GIKSIDG---VEYLNNLTQINFSNN-QLTDI---------T-P-LKNLTKLVDILMNNNQ-IADIT 100 (199)
T ss_dssp HHTTCCEEECTTS-CCCCCTT---GGGCTTCCEEECCSS-CCCCC---------G-G-GTTCTTCCEEECCSSC-CCCCG
T ss_pred HhcCCCEEECCCC-CCCCccc---cccCCCcCcCccccc-cccCc---------c-c-ccCCcccccccccccc-ccccc
Confidence 4677778888776 3554322 456788888888877 45554 1 2 3667788888887753 33333
Q ss_pred CCccccccCCCccEEEeccCCCcccccCCCceEEEecCCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccCCCc
Q 014145 157 NFTENIIEMPELRYLAIENCPDMETFISNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRLHKV 236 (430)
Q Consensus 157 ~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l 236 (430)
. +..+++|+.|.+.++..... .....+++|+.|+++++ .+
T Consensus 101 ~----l~~l~~L~~L~l~~~~~~~~-----------------------------------~~~~~l~~L~~L~l~~n-~l 140 (199)
T d2omxa2 101 P----LANLTNLTGLTLFNNQITDI-----------------------------------DPLKNLTNLNRLELSSN-TI 140 (199)
T ss_dssp G----GTTCTTCSEEECCSSCCCCC-----------------------------------GGGTTCTTCSEEECCSS-CC
T ss_pred c----cccccccccccccccccccc-----------------------------------cccchhhhhHHhhhhhh-hh
Confidence 2 55677777777766652221 12345667777777764 34
Q ss_pred eeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEccCCCcccccCchhhccccccceE
Q 014145 237 QHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSKCHGLINVLTLSTSESLVNLGRM 306 (430)
Q Consensus 237 ~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L 306 (430)
..+. .+ ..+++|+.|++.++ .++.++ .+..+++|++|++++| .+++++. +..+++|++|
T Consensus 141 ~~~~--~l---~~~~~L~~L~l~~n-~l~~l~-~l~~l~~L~~L~ls~N-~i~~i~~---l~~L~~L~~L 199 (199)
T d2omxa2 141 SDIS--AL---SGLTSLQQLNFSSN-QVTDLK-PLANLTTLERLDISSN-KVSDISV---LAKLTNLESL 199 (199)
T ss_dssp CCCG--GG---TTCTTCSEEECCSS-CCCCCG-GGTTCTTCCEEECCSS-CCCCCGG---GGGCTTCSEE
T ss_pred cccc--cc---cccccccccccccc-cccCCc-cccCCCCCCEEECCCC-CCCCCcc---ccCCCCCCcC
Confidence 4331 12 56677777777775 344443 3567778888888876 4666542 4566777665
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.27 E-value=2.4e-11 Score=105.52 Aligned_cols=165 Identities=21% Similarity=0.295 Sum_probs=108.4
Q ss_pred CCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCcccccccc
Q 014145 77 FFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFC 156 (430)
Q Consensus 77 ~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~ 156 (430)
.+.+|+.|++++| .+..+.+ ++.+++|++|++++| .+..+ + .+ ..+++|+.|+++++ .+..++
T Consensus 44 ~L~~L~~L~l~~~-~i~~l~~---l~~l~~L~~L~L~~n-~i~~l---------~-~~-~~l~~L~~L~l~~n-~i~~l~ 106 (210)
T d1h6ta2 44 ELNSIDQIIANNS-DIKSVQG---IQYLPNVTKLFLNGN-KLTDI---------K-PL-ANLKNLGWLFLDEN-KVKDLS 106 (210)
T ss_dssp HHHTCCEEECTTS-CCCCCTT---GGGCTTCCEEECCSS-CCCCC---------G-GG-TTCTTCCEEECCSS-CCCCGG
T ss_pred HhcCccEEECcCC-CCCCchh---HhhCCCCCEEeCCCc-cccCc---------c-cc-ccCccccccccccc-cccccc
Confidence 5778999999987 4555433 567999999999998 46555 2 22 67889999999886 566665
Q ss_pred CCccccccCCCccEEEeccCCCcccccCCCceEEEecCCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccCCCc
Q 014145 157 NFTENIIEMPELRYLAIENCPDMETFISNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRLHKV 236 (430)
Q Consensus 157 ~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l 236 (430)
. +..+++|+.|.+.++. +..+ .....++.++.++++++ .+
T Consensus 107 ~----l~~l~~L~~L~l~~~~-~~~~----------------------------------~~l~~l~~l~~l~~~~n-~l 146 (210)
T d1h6ta2 107 S----LKDLKKLKSLSLEHNG-ISDI----------------------------------NGLVHLPQLESLYLGNN-KI 146 (210)
T ss_dssp G----GTTCTTCCEEECTTSC-CCCC----------------------------------GGGGGCTTCCEEECCSS-CC
T ss_pred c----cccccccccccccccc-cccc----------------------------------ccccccccccccccccc-cc
Confidence 3 5678888888888775 2211 12345567777777664 33
Q ss_pred eeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEccCCCcccccCchhhccccccceEeec
Q 014145 237 QHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSKCHGLINVLTLSTSESLVNLGRMKIA 309 (430)
Q Consensus 237 ~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~ 309 (430)
+... .. ..+++|+.++++++. +..++ .+..+++|++|++++| .+++++. +..+++|++|+++
T Consensus 147 ~~~~--~~---~~l~~L~~l~l~~n~-l~~i~-~l~~l~~L~~L~Ls~N-~i~~l~~---l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 147 TDIT--VL---SRLTKLDTLSLEDNQ-ISDIV-PLAGLTKLQNLYLSKN-HISDLRA---LAGLKNLDVLELF 208 (210)
T ss_dssp CCCG--GG---GGCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSS-CCCBCGG---GTTCTTCSEEEEE
T ss_pred cccc--cc---ccccccccccccccc-ccccc-cccCCCCCCEEECCCC-CCCCChh---hcCCCCCCEEEcc
Confidence 3321 11 566777777777753 44443 2556777777777776 4666542 4567777777775
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.25 E-value=3.8e-11 Score=104.18 Aligned_cols=165 Identities=18% Similarity=0.285 Sum_probs=113.1
Q ss_pred CCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccC
Q 014145 50 FRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNA 129 (430)
Q Consensus 50 l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~ 129 (430)
+.+|++|+++++. ++.+ .+. ..+++|+.|+++++ .+..+.+ +..+++|++|++++| .++.+
T Consensus 45 L~~L~~L~l~~~~-i~~l-~~l----~~l~~L~~L~L~~n-~i~~l~~---~~~l~~L~~L~l~~n-~i~~l-------- 105 (210)
T d1h6ta2 45 LNSIDQIIANNSD-IKSV-QGI----QYLPNVTKLFLNGN-KLTDIKP---LANLKNLGWLFLDEN-KVKDL-------- 105 (210)
T ss_dssp HHTCCEEECTTSC-CCCC-TTG----GGCTTCCEEECCSS-CCCCCGG---GTTCTTCCEEECCSS-CCCCG--------
T ss_pred hcCccEEECcCCC-CCCc-hhH----hhCCCCCEEeCCCc-cccCccc---cccCccccccccccc-ccccc--------
Confidence 5689999999876 6653 222 57999999999998 4666444 457999999999998 46655
Q ss_pred CccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCcccccCCCceEEEecCCCCCcccCCCceeee
Q 014145 130 DKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFISNSVVHVTTDNKEPEKLTSEENFFLT 209 (430)
Q Consensus 130 ~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~ 209 (430)
+ . ...+++|+.|++.++.. ..++. +..+++++.+.+.++. ++...
T Consensus 106 -~-~-l~~l~~L~~L~l~~~~~-~~~~~----l~~l~~l~~l~~~~n~-l~~~~-------------------------- 150 (210)
T d1h6ta2 106 -S-S-LKDLKKLKSLSLEHNGI-SDING----LVHLPQLESLYLGNNK-ITDIT-------------------------- 150 (210)
T ss_dssp -G-G-GTTCTTCCEEECTTSCC-CCCGG----GGGCTTCCEEECCSSC-CCCCG--------------------------
T ss_pred -c-c-ccccccccccccccccc-ccccc----cccccccccccccccc-ccccc--------------------------
Confidence 2 3 37789999999998753 33432 6678888888887764 33321
Q ss_pred cCcccccccCCCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcccccCCcccCCCCCEEEEcc
Q 014145 210 DQIQPLFDEKVAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPSWHLENLATLEVSK 284 (430)
Q Consensus 210 ~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l~~l~~L~~L~l~~ 284 (430)
....+++|+.++++++ .++.+.. + ..+++|++|+++++ .++.++ .+..+++|+.|++++
T Consensus 151 --------~~~~l~~L~~l~l~~n-~l~~i~~--l---~~l~~L~~L~Ls~N-~i~~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 151 --------VLSRLTKLDTLSLEDN-QISDIVP--L---AGLTKLQNLYLSKN-HISDLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp --------GGGGCTTCSEEECCSS-CCCCCGG--G---TTCTTCCEEECCSS-CCCBCG-GGTTCTTCSEEEEEE
T ss_pred --------cccccccccccccccc-ccccccc--c---cCCCCCCEEECCCC-CCCCCh-hhcCCCCCCEEEccC
Confidence 1234567777777765 4444321 2 56677777777775 455554 466777777777753
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.24 E-value=6.5e-11 Score=101.78 Aligned_cols=163 Identities=17% Similarity=0.244 Sum_probs=116.2
Q ss_pred HhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCccc
Q 014145 102 RCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMET 181 (430)
Q Consensus 102 ~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~ 181 (430)
..++++++|++++| .+..+ .++ ..+++|++|+++++ .+..++. +..+++|++|.+.++. +..
T Consensus 37 ~~l~~l~~L~l~~~-~i~~l----------~~l-~~l~nL~~L~Ls~N-~l~~~~~----l~~l~~L~~L~l~~n~-~~~ 98 (199)
T d2omxa2 37 TDLDQVTTLQADRL-GIKSI----------DGV-EYLNNLTQINFSNN-QLTDITP----LKNLTKLVDILMNNNQ-IAD 98 (199)
T ss_dssp HHHTTCCEEECTTS-CCCCC----------TTG-GGCTTCCEEECCSS-CCCCCGG----GTTCTTCCEEECCSSC-CCC
T ss_pred HHhcCCCEEECCCC-CCCCc----------ccc-ccCCCcCcCccccc-cccCccc----ccCCcccccccccccc-ccc
Confidence 35788999999988 45554 343 67899999999986 5655543 6678888888887765 221
Q ss_pred ccCCCceEEEecCCCCCcccCCCceeeecCcccccccCCCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecC
Q 014145 182 FISNSVVHVTTDNKEPEKLTSEENFFLTDQIQPLFDEKVAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISEC 261 (430)
Q Consensus 182 ~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c 261 (430)
+ .....+++|+.|+++++.. ... ..+ ..+++|+.|+++++
T Consensus 99 ~----------------------------------~~l~~l~~L~~L~l~~~~~-~~~--~~~---~~l~~L~~L~l~~n 138 (199)
T d2omxa2 99 I----------------------------------TPLANLTNLTGLTLFNNQI-TDI--DPL---KNLTNLNRLELSSN 138 (199)
T ss_dssp C----------------------------------GGGTTCTTCSEEECCSSCC-CCC--GGG---TTCTTCSEEECCSS
T ss_pred c----------------------------------ccccccccccccccccccc-ccc--ccc---chhhhhHHhhhhhh
Confidence 1 1246788999999998643 332 122 67899999999987
Q ss_pred CCcccccCCcccCCCCCEEEEccCCCcccccCchhhccccccceEeeccccccchhhcccccccCCcceeecccceE
Q 014145 262 SKLQKLVTPSWHLENLATLEVSKCHGLINVLTLSTSESLVNLGRMKIADCKMIEQIIQLQVGEEAKGCVVFEELGYL 338 (430)
Q Consensus 262 ~~l~~l~~~l~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L 338 (430)
. +..++ .+..+++|+.|++.+| .+.+++. ++.+++|++|++++++ +.++. ....+++|++|
T Consensus 139 ~-l~~~~-~l~~~~~L~~L~l~~n-~l~~l~~---l~~l~~L~~L~ls~N~-i~~i~---------~l~~L~~L~~L 199 (199)
T d2omxa2 139 T-ISDIS-ALSGLTSLQQLNFSSN-QVTDLKP---LANLTTLERLDISSNK-VSDIS---------VLAKLTNLESL 199 (199)
T ss_dssp C-CCCCG-GGTTCTTCSEEECCSS-CCCCCGG---GTTCTTCCEEECCSSC-CCCCG---------GGGGCTTCSEE
T ss_pred h-hcccc-cccccccccccccccc-cccCCcc---ccCCCCCCEEECCCCC-CCCCc---------cccCCCCCCcC
Confidence 4 55554 4678899999999987 5666653 6789999999999984 66553 11236677665
No 22
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.20 E-value=1e-09 Score=102.01 Aligned_cols=282 Identities=19% Similarity=0.140 Sum_probs=163.5
Q ss_pred hhhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCc
Q 014145 39 TIQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSL 118 (430)
Q Consensus 39 ~~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l 118 (430)
.++.+|+ ..++|++|+++++. ++.++ ..+.+|+.|+++++ .+..+... .++|++|++++| .+
T Consensus 49 ~L~~lp~---~~~~L~~L~Ls~N~-l~~lp-------~~~~~L~~L~l~~n-~l~~l~~l-----p~~L~~L~L~~n-~l 110 (353)
T d1jl5a_ 49 GLSSLPE---LPPHLESLVASCNS-LTELP-------ELPQSLKSLLVDNN-NLKALSDL-----PPLLEYLGVSNN-QL 110 (353)
T ss_dssp CCSCCCS---CCTTCSEEECCSSC-CSSCC-------CCCTTCCEEECCSS-CCSCCCSC-----CTTCCEEECCSS-CC
T ss_pred CCCCCCC---CCCCCCEEECCCCC-Ccccc-------cchhhhhhhhhhhc-ccchhhhh-----cccccccccccc-cc
Confidence 3445554 24799999999765 77532 24578999999986 34443221 246999999998 46
Q ss_pred cEecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCccccc---CCCceEEEecCC
Q 014145 119 EEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFI---SNSVVHVTTDNK 195 (430)
Q Consensus 119 ~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~---~~~L~~L~l~~~ 195 (430)
..+ |. ...+++|++|++.++. +...+ ...+.+..+.+..+....... ...++.+.+.++
T Consensus 111 ~~l---------p~--~~~l~~L~~L~l~~~~-~~~~~------~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n 172 (353)
T d1jl5a_ 111 EKL---------PE--LQNSSFLKIIDVDNNS-LKKLP------DLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNN 172 (353)
T ss_dssp SSC---------CC--CTTCTTCCEEECCSSC-CSCCC------CCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSS
T ss_pred ccc---------cc--hhhhccceeecccccc-ccccc------cccccccchhhccccccccccccccccceecccccc
Confidence 665 32 3678999999998864 33332 234566666665554332221 456677777776
Q ss_pred CCCcccCC----CceeeecCcccccccCCCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcccccCCc
Q 014145 196 EPEKLTSE----ENFFLTDQIQPLFDEKVAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLVTPS 271 (430)
Q Consensus 196 ~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~l 271 (430)
....+... ..+...+.....+.....++.|+.++++++. ...+. ....++..+.+...... ..+.
T Consensus 173 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~-~~~~~-------~~~~~l~~~~~~~~~~~-~~~~-- 241 (353)
T d1jl5a_ 173 SLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNL-LKTLP-------DLPPSLEALNVRDNYLT-DLPE-- 241 (353)
T ss_dssp CCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSC-CSSCC-------SCCTTCCEEECCSSCCS-CCCC--
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc-ccccc-------ccccccccccccccccc-cccc--
Confidence 65443321 1111111122233345667889999988753 22222 33455666666554221 1111
Q ss_pred ccCCCCCEEEEccC--CCcccccC------------chhhccccccceEeeccccccchhhcccccccCCcceeecccce
Q 014145 272 WHLENLATLEVSKC--HGLINVLT------------LSTSESLVNLGRMKIADCKMIEQIIQLQVGEEAKGCVVFEELGY 337 (430)
Q Consensus 272 ~~l~~L~~L~l~~c--~~l~~l~~------------~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~L~~ 337 (430)
....+...++... ..+..++. ......+++|++|++++|. +..++. .+++|++
T Consensus 242 -~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~-l~~lp~-----------~~~~L~~ 308 (353)
T d1jl5a_ 242 -LPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNK-LIELPA-----------LPPRLER 308 (353)
T ss_dssp -CCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSC-CSCCCC-----------CCTTCCE
T ss_pred -ccccccccccccccccccccccchhcccccccCccccccccCCCCCEEECCCCc-cCcccc-----------ccCCCCE
Confidence 1112222221110 00000000 0012335789999999874 555531 2789999
Q ss_pred EeccCCCCCceeccCCcccCCCCccEEeeccCCCCcccCCCCcCCCCceeeec
Q 014145 338 LGLDCLPSLTSFCLGNYALEFPSLEHVVVRQCPTMKIFSQGVVDAPKLNKVKP 390 (430)
Q Consensus 338 L~l~~c~~L~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~L~~l~l 390 (430)
|++.++ .+++++. . +++|++|++++|+ ++.+|.. +.+|+.|.+
T Consensus 309 L~L~~N-~L~~l~~---~--~~~L~~L~L~~N~-L~~lp~~---~~~L~~L~~ 351 (353)
T d1jl5a_ 309 LIASFN-HLAEVPE---L--PQNLKQLHVEYNP-LREFPDI---PESVEDLRM 351 (353)
T ss_dssp EECCSS-CCSCCCC---C--CTTCCEEECCSSC-CSSCCCC---CTTCCEEEC
T ss_pred EECCCC-cCCcccc---c--cCCCCEEECcCCc-CCCCCcc---ccccCeeEC
Confidence 999886 6888764 1 5789999999986 8888863 457787776
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=6.5e-09 Score=85.74 Aligned_cols=108 Identities=19% Similarity=0.238 Sum_probs=65.6
Q ss_pred CCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEeccccccc
Q 014145 49 GFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELN 128 (430)
Q Consensus 49 ~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~ 128 (430)
...++++|+++++. +..++... ..+++|+.|+++++ .+.++.. +..+++|++|++++| .+..+
T Consensus 16 n~~~lr~L~L~~n~-I~~i~~~~----~~l~~L~~L~Ls~N-~i~~l~~---~~~l~~L~~L~ls~N-~i~~l------- 78 (162)
T d1a9na_ 16 NAVRDRELDLRGYK-IPVIENLG----ATLDQFDAIDFSDN-EIRKLDG---FPLLRRLKTLLVNNN-RICRI------- 78 (162)
T ss_dssp CTTSCEEEECTTSC-CCSCCCGG----GGTTCCSEEECCSS-CCCEECC---CCCCSSCCEEECCSS-CCCEE-------
T ss_pred CcCcCcEEECCCCC-CCccCccc----cccccCCEEECCCC-CCCccCC---cccCcchhhhhcccc-cccCC-------
Confidence 45567778877766 65543222 35677777777776 3554322 456777777777777 36665
Q ss_pred CCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCC
Q 014145 129 ADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCP 177 (430)
Q Consensus 129 ~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~ 177 (430)
+.+++..+++|++|++.++ .+..++... .+..+++|++|++.+|+
T Consensus 79 --~~~~~~~l~~L~~L~L~~N-~i~~~~~l~-~l~~l~~L~~L~l~~N~ 123 (162)
T d1a9na_ 79 --GEGLDQALPDLTELILTNN-SLVELGDLD-PLASLKSLTYLCILRNP 123 (162)
T ss_dssp --CSCHHHHCTTCCEEECCSC-CCCCGGGGG-GGGGCTTCCEEECCSSG
T ss_pred --Cccccccccccccceeccc-ccccccccc-ccccccccchhhcCCCc
Confidence 4444456777777777775 343333211 14566777777776665
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=3.2e-08 Score=81.47 Aligned_cols=83 Identities=18% Similarity=0.200 Sum_probs=43.7
Q ss_pred CCCCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCccccc--CCcccCCCCCEEEEccCCCcccccC--ch
Q 014145 220 VAFPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQKLV--TPSWHLENLATLEVSKCHGLINVLT--LS 295 (430)
Q Consensus 220 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~--~~l~~l~~L~~L~l~~c~~l~~l~~--~~ 295 (430)
..+++|++|+++++ .++.+....+ ..+++|+.|+++++. +..++ ..+..+++|++|++++|+ +...+. ..
T Consensus 60 ~~l~~L~~L~ls~N-~i~~l~~~~~---~~l~~L~~L~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~ 133 (162)
T d1a9na_ 60 PLLRRLKTLLVNNN-RICRIGEGLD---QALPDLTELILTNNS-LVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLY 133 (162)
T ss_dssp CCCSSCCEEECCSS-CCCEECSCHH---HHCTTCCEEECCSCC-CCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHH
T ss_pred ccCcchhhhhcccc-cccCCCcccc---ccccccccceecccc-ccccccccccccccccchhhcCCCc-cccccchHHH
Confidence 45566777777664 4555544333 456667777766653 33332 234456666666666653 333332 11
Q ss_pred hhccccccceEee
Q 014145 296 TSESLVNLGRMKI 308 (430)
Q Consensus 296 ~~~~l~~L~~L~l 308 (430)
.+..+|+|++||-
T Consensus 134 ~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 134 VIYKVPQVRVLDF 146 (162)
T ss_dssp HHHHCTTCSEETT
T ss_pred HHHHCCCcCeeCC
Confidence 2345566666553
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.66 E-value=3.8e-08 Score=83.45 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=84.8
Q ss_pred hhhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCc
Q 014145 39 TIQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSL 118 (430)
Q Consensus 39 ~~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l 118 (430)
.++++|.++ .+++++|+++++. +....... ....+++|+.|+++++. +..++ ...+..+++|++|++++| .+
T Consensus 19 ~L~~iP~~l--p~~l~~L~Ls~N~-i~~~~~~~--~f~~l~~L~~L~L~~N~-i~~~~-~~~~~~~~~L~~L~Ls~N-~l 90 (192)
T d1w8aa_ 19 GLKEIPRDI--PLHTTELLLNDNE-LGRISSDG--LFGRLPHLVKLELKRNQ-LTGIE-PNAFEGASHIQELQLGEN-KI 90 (192)
T ss_dssp CCSSCCSCC--CTTCSEEECCSCC-CCSBCCSC--SGGGCTTCCEEECCSSC-CCCBC-TTTTTTCTTCCEEECCSC-CC
T ss_pred CcCccCCCC--CCCCCEEEeCCCC-Cccccccc--ccCCCceEeeeeccccc-ccccc-ccccccccccceeeeccc-cc
Confidence 356677665 3689999999886 54311111 12468899999998863 44433 344778899999999998 67
Q ss_pred cEecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCC
Q 014145 119 EEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCP 177 (430)
Q Consensus 119 ~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~ 177 (430)
..+ +.+.+.++++|++|+++++ .+..++.. ....+++|++|.+.+++
T Consensus 91 ~~l---------~~~~F~~l~~L~~L~L~~N-~l~~i~~~--~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 91 KEI---------SNKMFLGLHQLKTLNLYDN-QISCVMPG--SFEHLNSLTSLNLASNP 137 (192)
T ss_dssp CEE---------CSSSSTTCTTCCEEECCSS-CCCEECTT--SSTTCTTCCEEECTTCC
T ss_pred ccc---------CHHHHhCCCcccccccCCc-cccccCHH--HhcCCcccccccccccc
Confidence 777 6666788999999999985 67767543 25677888888887765
No 26
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.66 E-value=7.1e-08 Score=75.50 Aligned_cols=14 Identities=14% Similarity=0.109 Sum_probs=6.8
Q ss_pred HhcCCCCEEEEecC
Q 014145 102 RCLNNLRWLEVRNC 115 (430)
Q Consensus 102 ~~l~~L~~L~l~~~ 115 (430)
+++++|++|++++|
T Consensus 17 ~~l~~L~~L~ls~N 30 (124)
T d1dcea3 17 EQLLLVTHLDLSHN 30 (124)
T ss_dssp GGGTTCCEEECCSS
T ss_pred ccCCCCCEEECCCC
Confidence 34445555555544
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.60 E-value=8.7e-08 Score=74.96 Aligned_cols=101 Identities=22% Similarity=0.334 Sum_probs=62.7
Q ss_pred ceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccC
Q 014145 54 KYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEH 133 (430)
Q Consensus 54 ~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~ 133 (430)
|.|+++++. ++.+. +. +.+++|++|+++++ .+.++++ . +..+++|++|++++| .++.+ | +
T Consensus 1 R~L~Ls~n~-l~~l~-~l----~~l~~L~~L~ls~N-~l~~lp~-~-~~~l~~L~~L~l~~N-~i~~l---------~-~ 60 (124)
T d1dcea3 1 RVLHLAHKD-LTVLC-HL----EQLLLVTHLDLSHN-RLRALPP-A-LAALRCLEVLQASDN-ALENV---------D-G 60 (124)
T ss_dssp SEEECTTSC-CSSCC-CG----GGGTTCCEEECCSS-CCCCCCG-G-GGGCTTCCEEECCSS-CCCCC---------G-G
T ss_pred CEEEcCCCC-CCCCc-cc----ccCCCCCEEECCCC-ccCcchh-h-hhhhhcccccccccc-ccccc---------C-c
Confidence 456777665 55432 12 46778888888775 4555433 3 567888888888887 45554 2 3
Q ss_pred cCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCC
Q 014145 134 IGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCP 177 (430)
Q Consensus 134 l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~ 177 (430)
+ ..+++|++|+++++ .+..++.... ...+++|++|++.+++
T Consensus 61 ~-~~l~~L~~L~l~~N-~i~~~~~~~~-l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 61 V-ANLPRLQELLLCNN-RLQQSAAIQP-LVSCPRLVLLNLQGNS 101 (124)
T ss_dssp G-TTCSSCCEEECCSS-CCCSSSTTGG-GGGCTTCCEEECTTSG
T ss_pred c-ccccccCeEECCCC-ccCCCCCchh-hcCCCCCCEEECCCCc
Confidence 3 67778888888774 4444443222 5567777777776654
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.52 E-value=3.4e-07 Score=77.36 Aligned_cols=108 Identities=19% Similarity=0.200 Sum_probs=72.8
Q ss_pred ceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccC
Q 014145 54 KYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEH 133 (430)
Q Consensus 54 ~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~ 133 (430)
+.++.++.. ++.+ |.+-.+++++|++++. .+....+...+.++++|++|++++|. +..+ +.+
T Consensus 11 ~~v~Cs~~~-L~~i------P~~lp~~l~~L~Ls~N-~i~~~~~~~~f~~l~~L~~L~L~~N~-i~~~---------~~~ 72 (192)
T d1w8aa_ 11 TTVDCTGRG-LKEI------PRDIPLHTTELLLNDN-ELGRISSDGLFGRLPHLVKLELKRNQ-LTGI---------EPN 72 (192)
T ss_dssp TEEECTTSC-CSSC------CSCCCTTCSEEECCSC-CCCSBCCSCSGGGCTTCCEEECCSSC-CCCB---------CTT
T ss_pred CEEEEeCCC-cCcc------CCCCCCCCCEEEeCCC-CCcccccccccCCCceEeeeeccccc-cccc---------ccc
Confidence 345555443 5543 3333478999999986 35444444557889999999999884 5554 455
Q ss_pred cCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCCCccccc
Q 014145 134 IGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCPDMETFI 183 (430)
Q Consensus 134 l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~ 183 (430)
.+..+++|++|+++++ .+..++.. .+..+++|++|++.++. ++.++
T Consensus 73 ~~~~~~~L~~L~Ls~N-~l~~l~~~--~F~~l~~L~~L~L~~N~-l~~i~ 118 (192)
T d1w8aa_ 73 AFEGASHIQELQLGEN-KIKEISNK--MFLGLHQLKTLNLYDNQ-ISCVM 118 (192)
T ss_dssp TTTTCTTCCEEECCSC-CCCEECSS--SSTTCTTCCEEECCSSC-CCEEC
T ss_pred ccccccccceeeeccc-cccccCHH--HHhCCCcccccccCCcc-ccccC
Confidence 5678899999999985 66666543 25678888888888765 55443
No 29
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.34 E-value=3.9e-08 Score=94.26 Aligned_cols=187 Identities=15% Similarity=0.049 Sum_probs=90.8
Q ss_pred CCCCCEEecccCCCceeeccCCchhhhhcccccEEEeecCCCcc----cccCCcc-cCCCCCEEEEccCCCcccccCch-
Q 014145 222 FPQLRYLELSRLHKVQHLWKENDESNKAFANLIRLKISECSKLQ----KLVTPSW-HLENLATLEVSKCHGLINVLTLS- 295 (430)
Q Consensus 222 ~~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~----~l~~~l~-~l~~L~~L~l~~c~~l~~l~~~~- 295 (430)
...++.++++++.-...............+.++.+++++++.-. .+...+. ..+.|+.+++++|. +.......
T Consensus 254 ~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~-l~~~~~~~l 332 (460)
T d1z7xw1 254 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCS-FTAACCSHF 332 (460)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSC-CBGGGHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccc-hhhhhhhhc
Confidence 44666666666422111100111111345667777776653221 1111111 33578888888774 33221111
Q ss_pred --hhccccccceEeeccccccchhhcccccccCCcc-eeecccceEeccCCCCCceeccC---CcccCCCCccEEeeccC
Q 014145 296 --TSESLVNLGRMKIADCKMIEQIIQLQVGEEAKGC-VVFEELGYLGLDCLPSLTSFCLG---NYALEFPSLEHVVVRQC 369 (430)
Q Consensus 296 --~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~-~~~~~L~~L~l~~c~~L~~~~~~---~~~~~~~~L~~L~l~~c 369 (430)
.....++|++|+++++. +.+.... ...... ...+.|++|++++| .+++.... .....+++|++|+++++
T Consensus 333 ~~~~~~~~~L~~L~Ls~N~-i~~~g~~---~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N 407 (460)
T d1z7xw1 333 SSVLAQNRFLLELQISNNR-LEDAGVR---ELCQGLGQPGSVLRVLWLADC-DVSDSSCSSLAATLLANHSLRELDLSNN 407 (460)
T ss_dssp HHHHHHCSSCCEEECCSSB-CHHHHHH---HHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred ccccccccchhhhheeeec-ccCcccc---hhhhhhhcccCCCCEEECCCC-CCChHHHHHHHHHHhcCCCCCEEECCCC
Confidence 12344678889888764 3321100 000000 11456888999888 56542211 11223688999999876
Q ss_pred CCCcc-----cCCCCc-CCCCceeeeccccCCCCCcccccCchhHHHHHHHHHhhcccc
Q 014145 370 PTMKI-----FSQGVV-DAPKLNKVKPTEEEDGDDEGCWEGNLNDTIKKLFNEMNSKEK 422 (430)
Q Consensus 370 ~~l~~-----~~~~~~-~~~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 422 (430)
.++. +..... ....|+.+.+.+.. |.......+..+.....+++.
T Consensus 408 -~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~-------~~~~~~~~l~~l~~~~~~l~~ 458 (460)
T d1z7xw1 408 -CLGDAGILQLVESVRQPGCLLEQLVLYDIY-------WSEEMEDRLQALEKDKPSLRV 458 (460)
T ss_dssp -SCCHHHHHHHHHHHTSTTCCCCEEECTTCC-------CCHHHHHHHHHHHHHCTTSEE
T ss_pred -cCCHHHHHHHHHHHHhCCCccCEEECCCCC-------CCHHHHHHHHHHHHhCCCCEE
Confidence 4432 111111 33468888885432 333334566666665555543
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.19 E-value=4.1e-08 Score=83.66 Aligned_cols=81 Identities=20% Similarity=0.287 Sum_probs=39.9
Q ss_pred CCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCccccccc
Q 014145 76 SFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRF 155 (430)
Q Consensus 76 ~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~ 155 (430)
..+++|++|+++++ ++..+.+ +.++++|++|++++| .+..+ + .+...+++|+.|++.++ .+..+
T Consensus 45 ~~L~~L~~L~Ls~n-~I~~i~~---l~~l~~L~~L~Ls~N-~i~~i---------~-~~~~~~~~L~~L~l~~N-~i~~l 108 (198)
T d1m9la_ 45 STLKACKHLALSTN-NIEKISS---LSGMENLRILSLGRN-LIKKI---------E-NLDAVADTLEELWISYN-QIASL 108 (198)
T ss_dssp HHTTTCCEEECSEE-EESCCCC---HHHHTTCCEEECCEE-EECSC---------S-SHHHHHHHCCEEECSEE-ECCCH
T ss_pred hcccccceeECccc-CCCCccc---ccCCccccChhhccc-ccccc---------c-ccccccccccccccccc-ccccc
Confidence 34566666666665 3444321 455666666666665 23333 1 11233345666666554 33333
Q ss_pred cCCccccccCCCccEEEeccC
Q 014145 156 CNFTENIIEMPELRYLAIENC 176 (430)
Q Consensus 156 ~~~~~~~~~~~~L~~L~l~~c 176 (430)
+. +..+++|++|++.++
T Consensus 109 ~~----~~~l~~L~~L~L~~N 125 (198)
T d1m9la_ 109 SG----IEKLVNLRVLYMSNN 125 (198)
T ss_dssp HH----HHHHHHSSEEEESEE
T ss_pred cc----ccccccccccccccc
Confidence 21 344555555555544
No 31
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.18 E-value=3e-06 Score=68.72 Aligned_cols=15 Identities=33% Similarity=0.485 Sum_probs=6.6
Q ss_pred HHhcCCCCEEEEecC
Q 014145 101 IRCLNNLRWLEVRNC 115 (430)
Q Consensus 101 ~~~l~~L~~L~l~~~ 115 (430)
+.++++|++|++++|
T Consensus 52 f~~l~~L~~L~Ls~N 66 (156)
T d2ifga3 52 LRGLGELRNLTIVKS 66 (156)
T ss_dssp SCSCCCCSEEECCSS
T ss_pred hccccccCcceeecc
Confidence 333444444444444
No 32
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.15 E-value=9.3e-07 Score=81.72 Aligned_cols=104 Identities=10% Similarity=-0.006 Sum_probs=57.3
Q ss_pred hhhhhhcccCCCCcceeecccccCCeee-ccCCCCCCCCCCCcceEEEeCCCCC--CccCchh------HHHhcCCCCEE
Q 014145 40 IQKCYEEMIGFRDIKYLQLGHFPRLQEI-WHGQALPVSFFNNLRHLVVDDCTNM--LSAIPAN------LIRCLNNLRWL 110 (430)
Q Consensus 40 ~~~l~~~~~~l~~L~~L~l~~~~~l~~~-~~~~~~~~~~l~~L~~L~l~~c~~l--~~~~~~~------~~~~l~~L~~L 110 (430)
+..+...+.....|+.|+++++. +... +....-.....++|+.|+++++..- ....+.. .+..+++|++|
T Consensus 20 ~~~l~~~L~~~~~l~~L~Ls~n~-i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L 98 (344)
T d2ca6a1 20 EKSVFAVLLEDDSVKEIVLSGNT-IGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTV 98 (344)
T ss_dssp HHTTSHHHHHCSCCCEEECTTSE-ECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEE
T ss_pred HHHHHHHHhhCCCCCEEECcCCc-CCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccc
Confidence 44455556667889999998765 4321 0000001145788999999876421 1111111 24457889999
Q ss_pred EEecCCCccEecccccccCCccCcCCcCCccceeecCCcc
Q 014145 111 EVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLP 150 (430)
Q Consensus 111 ~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~ 150 (430)
++++|. +... ++...... ....++|++|+++++.
T Consensus 99 ~L~~n~-i~~~----~~~~l~~~-l~~~~~L~~L~l~~n~ 132 (344)
T d2ca6a1 99 RLSDNA-FGPT----AQEPLIDF-LSKHTPLEHLYLHNNG 132 (344)
T ss_dssp ECCSCC-CCTT----THHHHHHH-HHHCTTCCEEECCSSC
T ss_pred cccccc-cccc----cccchhhh-hcccccchheeccccc
Confidence 998873 3221 11111111 2456788888888764
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.13 E-value=2.9e-06 Score=68.87 Aligned_cols=95 Identities=19% Similarity=0.188 Sum_probs=71.7
Q ss_pred hhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCcc
Q 014145 40 IQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSLE 119 (430)
Q Consensus 40 ~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~ 119 (430)
+.+.|..+..+++|++|++.+.+.++.+.... + ..+++|+.|+++++ ++..+.+. .+.++++|++|++++| .++
T Consensus 20 ~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~-f--~~l~~L~~L~Ls~N-~l~~i~~~-~f~~l~~L~~L~Ls~N-~l~ 93 (156)
T d2ifga3 20 ALDSLHHLPGAENLTELYIENQQHLQHLELRD-L--RGLGELRNLTIVKS-GLRFVAPD-AFHFTPRLSRLNLSFN-ALE 93 (156)
T ss_dssp CCTTTTTSCSCSCCSEEECCSCSSCCEECGGG-S--CSCCCCSEEECCSS-CCCEECTT-GGGSCSCCCEEECCSS-CCS
T ss_pred CccCcccccCccccCeeecCCCccccccCchh-h--ccccccCcceeecc-ccCCcccc-cccccccccceeccCC-CCc
Confidence 34556667788999999998777688765443 2 56899999999997 57765554 4788999999999998 466
Q ss_pred EecccccccCCccCcCCcCCccceeecCCcc
Q 014145 120 EVLHLEELNADKEHIGPLFPKLFELTLMDLP 150 (430)
Q Consensus 120 ~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~ 150 (430)
.+ |.+++..+ +|+.|++++.+
T Consensus 94 ~l---------~~~~~~~~-~l~~L~L~~Np 114 (156)
T d2ifga3 94 SL---------SWKTVQGL-SLQELVLSGNP 114 (156)
T ss_dssp CC---------CSTTTCSC-CCCEEECCSSC
T ss_pred cc---------Chhhhccc-cccccccCCCc
Confidence 66 56654443 68889988753
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.12 E-value=2.5e-08 Score=85.02 Aligned_cols=116 Identities=17% Similarity=0.165 Sum_probs=83.9
Q ss_pred hhhhhhhcccCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCCCc
Q 014145 39 TIQKCYEEMIGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCDSL 118 (430)
Q Consensus 39 ~~~~l~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~~l 118 (430)
.+..++..+..+++|++|+++++. ++.+. +. ..+++|+.|++++| .+..+++. ...+++|++|++++| .+
T Consensus 36 ~i~~l~~sl~~L~~L~~L~Ls~n~-I~~i~-~l----~~l~~L~~L~Ls~N-~i~~i~~~--~~~~~~L~~L~l~~N-~i 105 (198)
T d1m9la_ 36 PIEKMDATLSTLKACKHLALSTNN-IEKIS-SL----SGMENLRILSLGRN-LIKKIENL--DAVADTLEELWISYN-QI 105 (198)
T ss_dssp TCCCCHHHHHHTTTCCEEECSEEE-ESCCC-CH----HHHTTCCEEECCEE-EECSCSSH--HHHHHHCCEEECSEE-EC
T ss_pred chhhhhhHHhcccccceeECcccC-CCCcc-cc----cCCccccChhhccc-cccccccc--ccccccccccccccc-cc
Confidence 355566677789999999999876 66542 22 57899999999998 46654432 455678999999998 56
Q ss_pred cEecccccccCCccCcCCcCCccceeecCCccccccccCCccccccCCCccEEEeccCC
Q 014145 119 EEVLHLEELNADKEHIGPLFPKLFELTLMDLPKLKRFCNFTENIIEMPELRYLAIENCP 177 (430)
Q Consensus 119 ~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~ 177 (430)
+.+ .++ ..+++|+.|+++++ .+..++... .+..+++|++|.+.+++
T Consensus 106 ~~l----------~~~-~~l~~L~~L~L~~N-~i~~~~~~~-~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 106 ASL----------SGI-EKLVNLRVLYMSNN-KITNWGEID-KLAALDKLEDLLLAGNP 151 (198)
T ss_dssp CCH----------HHH-HHHHHSSEEEESEE-ECCCHHHHH-HHTTTTTCSEEEECSSH
T ss_pred ccc----------ccc-cccccccccccccc-hhccccccc-cccCCCccceeecCCCc
Confidence 555 222 67899999999986 444443211 15678999999998876
No 35
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.10 E-value=1e-07 Score=91.24 Aligned_cols=324 Identities=16% Similarity=0.121 Sum_probs=161.8
Q ss_pred CCcceeecccccCCeee-ccCCCCCCCCCCCcceEEEeCCCCCCccCc---hhHHHhcCCCCEEEEecCCCccEeccccc
Q 014145 51 RDIKYLQLGHFPRLQEI-WHGQALPVSFFNNLRHLVVDDCTNMLSAIP---ANLIRCLNNLRWLEVRNCDSLEEVLHLEE 126 (430)
Q Consensus 51 ~~L~~L~l~~~~~l~~~-~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~---~~~~~~l~~L~~L~l~~~~~l~~~~~~~~ 126 (430)
++|+.|++++.. +.+. |... + ..+++++.|++++|. ++.... ...++.+++|++|++++|. ++.. +
T Consensus 2 ~~l~~ld~~~~~-i~~~~~~~l-~--~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~----~ 71 (460)
T d1z7xw1 2 LDIQSLDIQCEE-LSDARWAEL-L--PLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSNE-LGDV----G 71 (460)
T ss_dssp EEEEEEEEESCC-CCHHHHHHH-H--HHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHH----H
T ss_pred CCCCEEEeeCCc-CChHHHHHH-H--HhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCCc-CChH----H
Confidence 478999998665 6542 1111 1 358899999999994 553211 1235789999999999984 5322 1
Q ss_pred ccCCccCcCCcCCccceeecCCccccccccCC--ccccccCCCccEEEeccCCCccccc---------------------
Q 014145 127 LNADKEHIGPLFPKLFELTLMDLPKLKRFCNF--TENIIEMPELRYLAIENCPDMETFI--------------------- 183 (430)
Q Consensus 127 ~~~~~~~l~~~l~~L~~L~l~~~~~l~~~~~~--~~~~~~~~~L~~L~l~~c~~l~~~~--------------------- 183 (430)
+......+....++|++|++++|. +...... ...+..+++|++|++.++. +...+
T Consensus 72 ~~~l~~~l~~~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~-i~~~~~~~l~~~l~~~~~~~~~~~~~ 149 (460)
T d1z7xw1 72 VHCVLQGLQTPSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNL-LGDAGLQLLCEGLLDPQCRLEKLQLE 149 (460)
T ss_dssp HHHHHHTTCSTTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHhcCCCCCCEEECCCCC-ccccccccccchhhcccccccccccccc-chhhhhhhhhhccccccccccccccc
Confidence 111122332334689999999985 4332100 0114578899999998875 33211
Q ss_pred ------------------CCCceEEEecCCCCCccc-------------CCCceeeecC------cccccccCCCCCCCC
Q 014145 184 ------------------SNSVVHVTTDNKEPEKLT-------------SEENFFLTDQ------IQPLFDEKVAFPQLR 226 (430)
Q Consensus 184 ------------------~~~L~~L~l~~~~~~~~~-------------~~~~l~~~~~------~~~~~~~~~~~~~L~ 226 (430)
...++.+.++++...... ....+...+. ...........+.++
T Consensus 150 ~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 229 (460)
T d1z7xw1 150 YCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLR 229 (460)
T ss_dssp TSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCC
T ss_pred ccccchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhccccccccccccc
Confidence 012223333322211000 0000000000 000111112234556
Q ss_pred EEecccCCCceeeccCC-chhhhhcccccEEEeecCCCccc----ccCCcccCCCCCEEEEccCCCcccccCch----hh
Q 014145 227 YLELSRLHKVQHLWKEN-DESNKAFANLIRLKISECSKLQK----LVTPSWHLENLATLEVSKCHGLINVLTLS----TS 297 (430)
Q Consensus 227 ~L~l~~~~~l~~~~~~~-~~~~~~l~~L~~L~l~~c~~l~~----l~~~l~~l~~L~~L~l~~c~~l~~l~~~~----~~ 297 (430)
.+.+.++.......... .........++.++++++..... ....+...+.++.+++++++ +.+..... ..
T Consensus 230 ~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~-i~~~~~~~l~~~l~ 308 (460)
T d1z7xw1 230 ELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE-LGDEGARLLCETLL 308 (460)
T ss_dssp EEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC-CHHHHHHHHHHHHT
T ss_pred ccchhhccccccccchhhccccccccccccccccccccccccccccccccccccccccccccccc-ccccccchhhcccc
Confidence 66665532111000000 00003345677777777643221 11223456677777777653 33211110 11
Q ss_pred ccccccceEeeccccccchhhcccccccCCcceeecccceEeccCCCCCceeccCC---c-ccCCCCccEEeeccCCCCc
Q 014145 298 ESLVNLGRMKIADCKMIEQIIQLQVGEEAKGCVVFEELGYLGLDCLPSLTSFCLGN---Y-ALEFPSLEHVVVRQCPTMK 373 (430)
Q Consensus 298 ~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~---~-~~~~~~L~~L~l~~c~~l~ 373 (430)
.....|+.+++++|..-..-. ..........++|++|+++++ .+++-.... . ....+.|++|++.+| .++
T Consensus 309 ~~~~~L~~l~l~~~~l~~~~~----~~l~~~~~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n-~i~ 382 (460)
T d1z7xw1 309 EPGCQLESLWVKSCSFTAACC----SHFSSVLAQNRFLLELQISNN-RLEDAGVRELCQGLGQPGSVLRVLWLADC-DVS 382 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGH----HHHHHHHHHCSSCCEEECCSS-BCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCC
T ss_pred ccccccccccccccchhhhhh----hhcccccccccchhhhheeee-cccCcccchhhhhhhcccCCCCEEECCCC-CCC
Confidence 223568888888774322111 000001122567999999986 454321100 0 113567999999999 454
Q ss_pred c-----cCCCCcCCCCceeeecccc
Q 014145 374 I-----FSQGVVDAPKLNKVKPTEE 393 (430)
Q Consensus 374 ~-----~~~~~~~~~~L~~l~l~~~ 393 (430)
. ++..+...++|++|++.++
T Consensus 383 ~~~~~~l~~~l~~~~~L~~L~Ls~N 407 (460)
T d1z7xw1 383 DSSCSSLAATLLANHSLRELDLSNN 407 (460)
T ss_dssp HHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred hHHHHHHHHHHhcCCCCCEEECCCC
Confidence 3 3334456789999999654
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.95 E-value=1.1e-06 Score=81.29 Aligned_cols=71 Identities=8% Similarity=-0.008 Sum_probs=36.2
Q ss_pred HHhcCCCCEEEEecCCCccEecccccccCCccCcCCcCCccceeecCCcccc--ccc-cCC----ccccccCCCccEEEe
Q 014145 101 IRCLNNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPKLFELTLMDLPKL--KRF-CNF----TENIIEMPELRYLAI 173 (430)
Q Consensus 101 ~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~l~~~l~~L~~L~l~~~~~l--~~~-~~~----~~~~~~~~~L~~L~l 173 (430)
+....+|++|++++|. +... +....... ....++|+.+++.++..- ... +.. ...+..+++|++|++
T Consensus 27 L~~~~~l~~L~Ls~n~-i~~~----~~~~l~~~-l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L 100 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGNT-IGTE----AARWLSEN-IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 100 (344)
T ss_dssp HHHCSCCCEEECTTSE-ECHH----HHHHHHHT-TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HhhCCCCCEEECcCCc-CCHH----HHHHHHHH-HHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccc
Confidence 5667888888888773 3211 11111112 255678888887765311 000 000 001334667777777
Q ss_pred ccCC
Q 014145 174 ENCP 177 (430)
Q Consensus 174 ~~c~ 177 (430)
.+|.
T Consensus 101 ~~n~ 104 (344)
T d2ca6a1 101 SDNA 104 (344)
T ss_dssp CSCC
T ss_pred cccc
Confidence 7664
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.67 E-value=0.0015 Score=52.52 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=18.0
Q ss_pred CCCcceEEEeCCCCCCccCc-hhHHHhcCCCCEEEEecC
Q 014145 78 FNNLRHLVVDDCTNMLSAIP-ANLIRCLNNLRWLEVRNC 115 (430)
Q Consensus 78 l~~L~~L~l~~c~~l~~~~~-~~~~~~l~~L~~L~l~~~ 115 (430)
+++|++|+++++ .+..+.+ ...++.+++|+.|++++|
T Consensus 64 ~~~L~~L~Ls~N-~i~~l~~~~~~~~~l~~L~~L~Ls~N 101 (162)
T d1koha1 64 IPELLSLNLSNN-RLYRLDDMSSIVQKAPNLKILNLSGN 101 (162)
T ss_dssp CTTCCCCCCCSS-CCCCCSGGGTHHHHSTTCCCCCCTTS
T ss_pred CCCCCEeeCCCc-cccCCchhHHHHhhCCcccccccccC
Confidence 455555555554 2333322 123445555555555555
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.63 E-value=0.0026 Score=50.98 Aligned_cols=65 Identities=17% Similarity=0.007 Sum_probs=45.3
Q ss_pred cCCCCcceeecccccCCeeeccCCCCCCCCCCCcceEEEeCCCCCCccCchhHHHhcCCCCEEEEecCC
Q 014145 48 IGFRDIKYLQLGHFPRLQEIWHGQALPVSFFNNLRHLVVDDCTNMLSAIPANLIRCLNNLRWLEVRNCD 116 (430)
Q Consensus 48 ~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~~~ 116 (430)
..+++|++|+++++. ++.+.... .....+++|+.|+++++ .+.++.....+ ...+|++|++++|+
T Consensus 62 ~~~~~L~~L~Ls~N~-i~~l~~~~-~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l-~~~~L~~L~L~~Np 126 (162)
T d1koha1 62 ENIPELLSLNLSNNR-LYRLDDMS-SIVQKAPNLKILNLSGN-ELKSERELDKI-KGLKLEELWLDGNS 126 (162)
T ss_dssp HHCTTCCCCCCCSSC-CCCCSGGG-THHHHSTTCCCCCCTTS-CCCCGGGHHHH-TTCCCSSCCCTTST
T ss_pred HhCCCCCEeeCCCcc-ccCCchhH-HHHhhCCcccccccccC-ccccchhhhhh-hccccceeecCCCC
Confidence 368999999999887 76542211 01145899999999996 45554444433 34579999999985
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=93.14 E-value=0.031 Score=44.56 Aligned_cols=14 Identities=14% Similarity=0.178 Sum_probs=8.3
Q ss_pred hcCCCCEEEEecCC
Q 014145 103 CLNNLRWLEVRNCD 116 (430)
Q Consensus 103 ~l~~L~~L~l~~~~ 116 (430)
+.++|++|+++++.
T Consensus 13 n~~~L~~L~L~~~~ 26 (167)
T d1pgva_ 13 DDTDLKEVNINNMK 26 (167)
T ss_dssp TCSSCCEEECTTCC
T ss_pred CCCCCcEEEeCCCC
Confidence 44666666666543
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=92.61 E-value=0.021 Score=45.64 Aligned_cols=66 Identities=6% Similarity=0.022 Sum_probs=35.3
Q ss_pred CCCCCCCCEEecccCCCceeeccCCch-hhhhcccccEEEeecCCCcc----cccCCcccCCCCCEEEEccC
Q 014145 219 KVAFPQLRYLELSRLHKVQHLWKENDE-SNKAFANLIRLKISECSKLQ----KLVTPSWHLENLATLEVSKC 285 (430)
Q Consensus 219 ~~~~~~L~~L~l~~~~~l~~~~~~~~~-~~~~l~~L~~L~l~~c~~l~----~l~~~l~~l~~L~~L~l~~c 285 (430)
....+.|++|+++++ .+.......++ .....++|++|++++|..-. .+...+...+.|++|+++++
T Consensus 40 L~~n~~L~~L~Ls~n-~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 40 ACNSKHIEKFSLANT-AISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp HTTCSCCCEEECTTS-CCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HhhCCccceeecccc-ccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCC
Confidence 445567777777765 34332222221 11345677777777764322 12233445567777777654
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=90.84 E-value=0.038 Score=43.83 Aligned_cols=91 Identities=13% Similarity=-0.019 Sum_probs=44.2
Q ss_pred CCCCCCCCEEecccCCCceeeccCCc-hhhhhcccccEEEeecCCCcc----cccCCcccCCCCCEEEEccCC-Cccccc
Q 014145 219 KVAFPQLRYLELSRLHKVQHLWKEND-ESNKAFANLIRLKISECSKLQ----KLVTPSWHLENLATLEVSKCH-GLINVL 292 (430)
Q Consensus 219 ~~~~~~L~~L~l~~~~~l~~~~~~~~-~~~~~l~~L~~L~l~~c~~l~----~l~~~l~~l~~L~~L~l~~c~-~l~~l~ 292 (430)
....+.|++|+++++ .+.......+ ......++++.+++++|..-. .+...+...++|+.+++..+. .+.+-.
T Consensus 42 l~~n~~L~~L~Ls~n-~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~ 120 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGT-RSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 120 (166)
T ss_dssp HTTCCSCCEEECTTS-CCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HhcCCccCeeeccCC-cccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHH
Confidence 345667777777775 3333111111 111445677777776654322 222344556677776665442 333221
Q ss_pred Cch---hhccccccceEeecc
Q 014145 293 TLS---TSESLVNLGRMKIAD 310 (430)
Q Consensus 293 ~~~---~~~~l~~L~~L~l~~ 310 (430)
... .+...+.|+.|++..
T Consensus 121 ~~~La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 121 EMEIANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp HHHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHHHHHhCCCcCEEeCcC
Confidence 111 123456667766654
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=90.18 E-value=0.035 Score=44.05 Aligned_cols=63 Identities=16% Similarity=0.060 Sum_probs=29.6
Q ss_pred CCCCCCEEecccCCCceeecc-CCchhhhhcccccEEEeecCC-Ccc-----cccCCcccCCCCCEEEEcc
Q 014145 221 AFPQLRYLELSRLHKVQHLWK-ENDESNKAFANLIRLKISECS-KLQ-----KLVTPSWHLENLATLEVSK 284 (430)
Q Consensus 221 ~~~~L~~L~l~~~~~l~~~~~-~~~~~~~~l~~L~~L~l~~c~-~l~-----~l~~~l~~l~~L~~L~l~~ 284 (430)
..+.++.++++++. +..... .........++|+.++|..+. .+. .+...+...++|++|++..
T Consensus 72 ~~~~l~~l~l~~~~-~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 72 VNNTLKSLNVESNF-ISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp HCSSCCEEECCSSC-CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred hcccchhhhhcccc-ccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcC
Confidence 34566666666542 211100 001111445666766665432 222 2223344667788887764
Done!