BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014154
(430 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58D06|WDR74_BOVIN WD repeat-containing protein 74 OS=Bos taurus GN=WDR74 PE=2 SV=1
Length = 385
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 6/174 (3%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 149 GGKENALKVWDLQGSEEPLFRAKNVRNDWLDLRVPVWDQDIQFLP--ESQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ AV P+ ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLEATYGEYPLTAVTLTPEGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKT-RQLLSAVFLKQHLNEVVF 350
G +GS+R + HP+ P++ASCGLD LR I+ R L V+LK LN ++
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIRNPRGLEHKVYLKSQLNCLLL 319
>sp|Q6RFH5|WDR74_HUMAN WD repeat-containing protein 74 OS=Homo sapiens GN=WDR74 PE=1 SV=1
Length = 385
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + +WDL E+ ++ AK + L + P W FL +K V T HQ
Sbjct: 149 GGKENALKIWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKT-RQLLSAVFLKQHLNEVVF 350
G +GS+R + HP+ P++ASCGLD LR I+ R L V+LK LN ++
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQNPRGLEHKVYLKSQLNCLLL 319
>sp|Q8VCG3|WDR74_MOUSE WD repeat-containing protein 74 OS=Mus musculus GN=Wdr74 PE=2 SV=1
Length = 384
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 96/173 (55%), Gaps = 6/173 (3%)
Query: 181 GKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GK + VWDL E+ ++ AK + L + P W FL +K V T HQV
Sbjct: 150 GKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDTQFLP--GSQKLVTCTGYHQV 207
Query: 240 RLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIG 298
R+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D R G+LLGC G
Sbjct: 208 RVYDPVSPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKG 267
Query: 299 KCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKT-RQLLSAVFLKQHLNEVVF 350
+GS+R + HP+ P++ASCGLD LR I+ R L V+LK LN ++
Sbjct: 268 -LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIRNPRGLEHKVYLKSQLNCLLL 319
>sp|Q54FW9|Y0555_DICDI WD repeat-containing protein DDB_G0290555 OS=Dictyostelium
discoideum GN=DDB_G0290555 PE=4 SV=1
Length = 508
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 111/205 (54%), Gaps = 12/205 (5%)
Query: 160 CASGTIAFSKVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSA 219
A+ F+ ++KF+ FGGK V + +WDL+K K ++AK + L + P
Sbjct: 160 VATNLSGFAMNPSNDKFA-FGGKDVNLTIWDLEKQVKTYSAKFK-HDFLNLQEPVSINVV 217
Query: 220 AFLSIDDHRKFVAGTNDHQVRLYD--TSAQRRPVMSFDFRETPIKAV--AEEPDSFNIYI 275
+++ D K + G+ D +++ YD + R + F + PI+++ + + + Y
Sbjct: 218 KYMNDD---KILIGS-DFRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQYTNQKEHY-FYA 272
Query: 276 GNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
+ G + D+RT + +G F +GS++ IA HPTLP++A+ GLD +LR +++ R++
Sbjct: 273 SDSIGKVFCYDVRTSRQVGSF-KDSAGSVKDIAIHPTLPLLATVGLDRHLRVYNLDNRKM 331
Query: 336 LSAVFLKQHLNEVVFDSAFADKEVA 360
L +FLKQ L+ V+F E+A
Sbjct: 332 LHKIFLKQRLSCVLFSKEEPTNEIA 356
>sp|Q6BUJ2|NSA1_DEBHA Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=NSA1 PE=3 SV=1
Length = 430
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 24/177 (13%)
Query: 197 IWTAKPPPKNSLGIFTPTWFTSAAFLSID--DHRKFVAGTNDHQVRLYDTSAQRRPVMSF 254
I+TA+ + L + P W +S F D KF+ T QVR+YDT+ +RP+ +
Sbjct: 193 IFTARNVKNDHLDLRPPIWISSILFFEEKPKDGYKFLTSTRYGQVRIYDTTHGKRPIQDY 252
Query: 255 DFRETPIKAV----AEEP----DSFNIYIGNGSGDLASVDIRT------------GKLLG 294
E PI + +EE D+ N+ + S +T KLLG
Sbjct: 253 KVCEKPIVTLNFADSEEEVIVSDTHNLVAKYSLAQIDSKAFKTHSASAGEITKPVSKLLG 312
Query: 295 CF-IGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVF 350
F G +G+I + II++ GLD YLR +DI +R++L+ V+L +++V+
Sbjct: 313 KFSAGGNTGAIVGVNIFDD-EIISTGGLDRYLRTYDISSREILAKVYLGVQISDVLM 368
>sp|A5DX41|NSA1_LODEL Ribosome biogenesis protein NSA1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=NSA1 PE=3 SV=1
Length = 447
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 197 IWTAKPPPKNSLGIFTPTWFTSAAFLS---IDDHRKFVAGTNDHQVRLYDTSAQRRPVMS 253
++ AK + L + P W T+ F + + K + T Q+R+YDT R+PV
Sbjct: 237 LFKAKNVSNDHLNLRVPIWITNILFFTNNVTNGQYKLITSTRYGQLRIYDTKHGRKPVKD 296
Query: 254 FDFRETPIKAVAEEPDSFNIYIGNGSGDLA---SVDI------RTG------------KL 292
+ TPI + D + + +L S+DI +T KL
Sbjct: 297 YPVSTTPILTLLFGNDKETEVVLTDTQNLMAKYSLDIIDDKAFKTNSASAGDIIKPVPKL 356
Query: 293 LGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFL 341
LG + G +G+ ++A+ I+A GLD YLR +D+++RQ+L+ V+L
Sbjct: 357 LGKYTGGNTGA--TLAQQVYEGIVAFAGLDRYLRVFDVESRQILAKVYL 403
>sp|A5DKC4|NSA1_PICGU Ribosome biogenesis protein NSA1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=NSA1 PE=3 SV=2
Length = 398
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 53/280 (18%)
Query: 107 VGLHLFKRQREESSSRSRTLLTCTTKGKASMRSIEVTKVSAESSCSTV--------KSWN 158
V LH+F S L+ GKA++ + K + E C V +++
Sbjct: 98 VSLHVF--------SEFDALVMGLDSGKAAL--VGFHKNTLEKECQIVDLPGGKPIEAFE 147
Query: 159 VCAS--GTIAF----SKVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFT 212
C S G A+ + + I + F + GK V++ L+ E ++ AK + L +
Sbjct: 148 ACPSQPGVFAYGGKENDLRIVKMFEV--GKKVKL----LESVEVLFAAKNVKNDHLDLRV 201
Query: 213 PTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAV-AEEPDSF 271
P W T F+S + K + T Q+R+YDT+ R+P + PI + +S
Sbjct: 202 PIWITKIRFISSKNSYKLITATRYGQLRIYDTNHGRKPAHDYQVCTNPIITLNFAGSNSD 261
Query: 272 NIYIGNGSG-----DLASVDIRTGK---------------LLGCFI-GKCSGSIRSIARH 310
+ I + L S+D + K LLG + G +G+I ++
Sbjct: 262 EVIITDNRNMVARHSLVSIDKKAFKTNSATVGDIIKPVPRLLGKYQEGGNTGAIFGVSCF 321
Query: 311 PTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVF 350
+A+ GLD YLR +D++TR+++S V++ + +++F
Sbjct: 322 KD-TFVATGGLDRYLRVYDLETREMVSKVYMGSQIADILF 360
>sp|Q5A2T0|NSA1_CANAL Ribosome biogenesis protein NSA1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=NSA1 PE=3 SV=1
Length = 406
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 193 KCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVM 252
K + I+ AK + L + P W T+ F K V T Q+RLYDT+ R+P
Sbjct: 192 KPQIIFKAKNVRNDHLELRVPIWITNILFAKAAKGYKLVTSTRYGQIRLYDTAEGRKPRK 251
Query: 253 SFDFRETPIKAVAEEPDSFNIYIGNGSGDLAS------VDIR---------------TGK 291
+ E PI + D I + L + VD + K
Sbjct: 252 DYKVTEKPIVTLTFANDEQTEIIVTDTHSLIAKYSLTQVDEKAFKTISASAGEIVKPVPK 311
Query: 292 LLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFL 341
LLG F G +G+ + H I+A GLD YLR +D+++R++L+ V+L
Sbjct: 312 LLGKFTGGNTGA--TFGVHAYERIVAFAGLDRYLRVFDLESREILAKVYL 359
>sp|A3LVX0|NSA1_PICST Ribosome biogenesis protein NSA1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=NSA1 PE=3 SV=2
Length = 430
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 178 LFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHR--KFVAGTN 235
+F + VE N K E ++TAK + L + P W T F + + KF+ T+
Sbjct: 186 IFDTENVENNF----KSEVVFTAKNVKNDHLDLRVPVWITKIRFFTEQPEKGYKFITATH 241
Query: 236 DHQVRLYDTSAQRRPVMSFDFRETPIKAVA---EEP------DSFNIYIGNGSGDLASVD 286
Q+R+YDT+ RRPV F + PI + EE DS N+ L VD
Sbjct: 242 YGQIRVYDTNHGRRPVRDFTVCQKPILTLTFANEEESEVIISDSHNLI---AKHSLIQVD 298
Query: 287 IR---------------TGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
+ KLLG F+ + G+ + L + + GLD YLR +D+
Sbjct: 299 DKASKTHSASAGDIIKPVAKLLGRFVDQF-GATYGVEVGEGL--LVTGGLDRYLRVFDLA 355
Query: 332 TRQLLS 337
+R++++
Sbjct: 356 SREIVA 361
>sp|O94698|NSA1_SCHPO Ribosome biogenesis protein nsa1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nsa1 PE=3 SV=1
Length = 387
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 185 EVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAF----LSIDDHR---------KFV 231
E+ +W + K++ K +SL + W T F +++ D + F
Sbjct: 167 ELELWRTENVVKVFQGKNVKNDSLNLRVRVWITGIVFTEDIINVIDGKSEDDESLCFHFA 226
Query: 232 AGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGK 291
T+ Q+R YDT RRPV +FD +P+ V P +Y + ++ D K
Sbjct: 227 TITHYGQLRFYDTKHGRRPVSTFDVSTSPLSHVGLLPSIKLLYFADKRAQISIFDHSKKK 286
Query: 292 LLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSA 338
++G F G G+ SI H ++A GLD +R +D + L +A
Sbjct: 287 VIGRFQG-VKGAPSSI--HCLGNVVAITGLDRNVRIFDADRKPLANA 330
>sp|Q6CKH7|NSA1_KLULA Ribosome biogenesis protein NSA1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NSA1 PE=3 SV=1
Length = 436
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 150/354 (42%), Gaps = 69/354 (19%)
Query: 103 DDGIVGLHLFKRQREESSSRSRTLLTCTTKGKASMRSIEVTKVSAESSCSTVKSWNVCA- 161
+D V L+L K+ S+++ L T G ++ +++ + S + S + A
Sbjct: 121 EDQFVELYLIKK-----SAKNPIFLAATKSGNVTIIEVDL----HSTKISKIASHKIKAP 171
Query: 162 SGTIAFSKVDISEKFSL-FGGKGVEVNVW----DLDKCEKIWTAKPPPKNSLGIFTPTWF 216
+ +D S+KF + +GG+ V + D + IW AK P +++G+ P W
Sbjct: 172 VEFVTLYDLDKSDKFVMAYGGEENLVRLIELSSDFKEISDIWAAKNVPFDNIGLRVPAWD 231
Query: 217 TSAAFLSIDDH--RKFVAGTNDHQVRLYDTSAQR-RPVMSFDFRETPIKAVAEEPDSFNI 273
+ FL + + F+ T Q+R Y T+A+ RPV S + E+ +S I
Sbjct: 232 VALRFLESEKNGVYNFITITKYAQLRKYSTNAEDCRPVKSI-----TLLPKGEQLNSCKI 286
Query: 274 YIGNGS--GDLASVDIRTGKLLGC--------FIGKCSGSIRSIARHPTLPIIASC---- 319
IG+ S G+ S + + L F GK +R IA+ + ASC
Sbjct: 287 -IGDTSPLGNFQSSNFDELEFLAADSRKDVYQFNGK-GRLLRKIAK-GDITGFASCIAVT 343
Query: 320 -------GLDSYLRFWDIKTRQLLSAVFLKQHLNEVVFDSAFADKEVANAAADAPMLEIQ 372
GLD Y+R +D+ +LL+ +F +D +LE
Sbjct: 344 DKYLLQGGLDRYVRIFDLADYKLLAKIF------------------TGGKVSDIILLE-- 383
Query: 373 NGNDTQEDATETLPVKRKEAPEEKDRSKKKKSKENEES-KKLKSKKKRRAKGDI 425
ND + TE +K+ ++ + + ENE+ KL+SKK++ +K DI
Sbjct: 384 -DNDLELPLTEKQLKMKKKKEAKRSIVEADEDAENEDLWNKLESKKRKVSKNDI 436
>sp|Q6CEC9|NSA1_YARLI Ribosome biogenesis protein NSA1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=NSA1 PE=3 SV=1
Length = 410
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 198 WTAKPPPKNSLGIFTPTWFTSAAFLSID-DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDF 256
+ A+ N + + P W + F + D D + + T Q+R+Y+T +RP F
Sbjct: 185 FQARNVKSNEIDMRVPVWISGILFQASDKDGFRVITATRHGQIRVYETWHGKRPKWDFKV 244
Query: 257 RETPIKAVAEEPDSFNI-------------YIGNGSGDLASVDIRTGKLLG----CFIGK 299
+ P++ +A D+ N+ + N L + D K C + K
Sbjct: 245 TKDPLRTLAPGMDASNVVSSDAHSSTFKFNFADNEKIVLKNKDNNQNKEHNRKSPCVVEK 304
Query: 300 CSGSIRSIARHPTLP--IIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVF 350
GS+ ++ T ++A+ GLD YLR +D++T + + +F+ ++ ++F
Sbjct: 305 FPGSLGAVLHLVTTDNGLLATVGLDRYLRIFDLETTECTAKMFVGTQVSSLLF 357
>sp|Q754U4|NSA1_ASHGO Ribosome biogenesis protein NSA1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NSA1
PE=3 SV=1
Length = 435
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 62/294 (21%)
Query: 163 GTIAFSKV-DISEKFSLFGGKGVEVNVW-------DLDKCEKIWTAKPPPKNSLGIFTPT 214
G + F+++ D+ E L G E N+ DL++ E+IW AK + L + P
Sbjct: 165 GPVEFAQLYDLEETEKLVFAYGGEDNLIKLVEVSRDLEQLEQIWEAKNVKNDRLDLKVPI 224
Query: 215 WFTSAAFL-------SIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDF---RE--TPIK 262
W + FL S + +F+A T + Y T+ R+P S D RE T ++
Sbjct: 225 WPAALRFLQPAVSPASEGLNYQFIAVTRHSHLHFYQTTHGRKPFRSVDLLPNREPTTSLE 284
Query: 263 AVAEEPDSFNIYIGNGSG-DLASVDIR--------TGKLLGCFIGKCSGSIRSIARHPTL 313
V + N+ + G + + D + +G LLG F G S H
Sbjct: 285 VVGDVTPLGNVKSTSFEGFSIITTDTKKSILQFEPSGHLLGKFGGSDIKGFPSYI-HVQG 343
Query: 314 PIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVFDSAFADKEVANAAADAPMLEIQN 373
+ GLD Y+R +++K R +L VF ++ V+ +L++
Sbjct: 344 KYLVEGGLDRYVRVFELKNRNMLLKVFAGGKVSSVL------------------LLDV-- 383
Query: 374 GNDTQEDATETLPVKRKEAPEEKDRSKKKKSKENEESKKL-----KSKKKRRAK 422
+D + LP+ +KE + + + + +E EE +L S K+R++K
Sbjct: 384 -SDVE------LPLSKKEKNKRRHKRVLDEDQEREEDNELWAQLDGSSKRRKSK 430
>sp|Q12417|PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRP46 PE=1 SV=1
Length = 451
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 226 DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASV 285
D+ F+ G+ND ++++D + + + ++ VA ++ + +
Sbjct: 151 DNEWFITGSNDTTMKVWDLATGKLKT-TLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCW 209
Query: 286 DIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR-QLLSAVFLKQH 344
D+ +++ + G SG +R+++ HPTL +IA+ G DS ++ WD++TR +++ V K
Sbjct: 210 DLEKNQIIRDYYGHLSG-VRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGP 268
Query: 345 LNEVVFDSAFADKEVANAAADAPM 368
+N+V D +V +++ DA +
Sbjct: 269 INQV--QCTPVDPQVVSSSTDATV 290
>sp|Q6C709|PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PRP46 PE=3 SV=2
Length = 441
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 226 DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASV 285
+++ F G+ D ++++D A + ++ ++A+ P ++ G +
Sbjct: 143 ENQWFATGSADKTIKIWDL-ATGKLRLTLTGHIMGVRALGVSPRHPYMFSGGEDKMVKCW 201
Query: 286 DIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQH- 344
D+ T K++ + G S ++ S+ HPTL ++ S G D+ R WDI+TR V L H
Sbjct: 202 DLETNKVVRHYHGHLS-AVYSLDIHPTLDVLVSAGRDAVARVWDIRTRD--PVVVLSGHK 258
Query: 345 --LNEVVFDSAFADKEVANAAAD 365
+N V F + ++ +V A+AD
Sbjct: 259 STINRVKFQA--SEPQVITASAD 279
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 261 IKAVAEEPDSFNIYIGNGSGD--LASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIAS 318
+++V EP+ N + GS D + D+ TGKL G G +R++ P P + S
Sbjct: 135 VRSVCVEPE--NQWFATGSADKTIKIWDLATGKLRLTLTGHIMG-VRALGVSPRHPYMFS 191
Query: 319 CGLDSYLRFWDIKTRQL-------LSAVF 340
G D ++ WD++T ++ LSAV+
Sbjct: 192 GGEDKMVKCWDLETNKVVRHYHGHLSAVY 220
>sp|P25382|NLE1_YEAST Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3
Length = 515
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRT 289
V ++D+ + L++ +P+ + + VA PD I + + D R
Sbjct: 374 MVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD 433
Query: 290 GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEV- 348
GK + F G + S+ +A ++ SC D+ L+ WD++TR+L +V L H +EV
Sbjct: 434 GKFISTFRGHVA-SVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKL--SVDLPGHKDEVY 490
Query: 349 VFDSAFADKEVANAAAD 365
D + K V + D
Sbjct: 491 TVDWSVDGKRVCSGGKD 507
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 254 FDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTL 313
F+ R + K VA P I +G + D R G LL F G G +R IA HPT
Sbjct: 7 FESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGH-DGPVRGIAFHPTQ 65
Query: 314 PIIASCGLDSYLRFWDIKTRQLL 336
P+ S G D + W+ K+R+LL
Sbjct: 66 PLFVSGGDDYKVNVWNYKSRKLL 88
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 169 KVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHR 228
+++ E+ + G + + VWDL+ + + T +G A S+D H
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-------MG-------HKANICSLDFHP 115
Query: 229 --KFVA-GTNDHQVRLYDTSAQRRPVMSFDFR--ETPIKAVAEEPDSFNIYIGNGSGDLA 283
+FVA G+ D ++L+D RR F +R ++ + PD + +
Sbjct: 116 YGEFVASGSQDTNIKLWDI---RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 284 SVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAV 339
D+ GK++ F G +G + + HP ++AS D +RFWD++ Q++S +
Sbjct: 173 LWDLTAGKMMSEFPGH-TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 37/193 (19%)
Query: 180 GGKGVEVNVWDLDK--CEKIWTAKPPPKNSLGIFTP--------------TWFTSAA--- 220
GG VN+W ++K C T P S+ + TP W AA
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 221 ---------FLSIDDHR--KFVA-GTNDHQVRLYDTSAQRRPVMSFDFR--ETPIKAVAE 266
S+D H +FVA G+ D ++L+D RR F +R ++ +
Sbjct: 99 RTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI---RRKGCVFRYRGHSQAVRCLRF 155
Query: 267 EPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLR 326
PD + + D+ GK++ F G +G + + HP ++AS D +R
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH-TGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 327 FWDIKTRQLLSAV 339
FWD++ Q++S +
Sbjct: 215 FWDLEKFQVVSCI 227
>sp|A8QD31|ERB1_MALGO Ribosome biogenesis protein ERB1 OS=Malassezia globosa (strain ATCC
MYA-4612 / CBS 7966) GN=ERB1 PE=3 SV=2
Length = 864
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 129 CTTKGKASMRSIEVTKVSAESSCSTVKSWNVCASGTIAFSKVDIS-EKFSLFGGKGVEVN 187
T +A+ ++ + +VS S + + + +A V + LF V
Sbjct: 661 ATVSPEAAGEAVLIHQVSKHRSQAPFRRTRRAGNSAMAVQCVCFHPSRPWLFVATQRYVR 720
Query: 188 VWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQ 247
V+DL + + T +P G+ W +S DH + G+ D +V +D
Sbjct: 721 VYDLVQQSLVKTLQP------GV---RWISSLDVHPSGDH--VIIGSYDRRVLWFDLDLS 769
Query: 248 RRPVMSFDFRETPIKAVAEEP-----------DSFNIYIGNGSGDLASVDIRTG-KLLGC 295
RP + + ++AVA P + ++Y G DL + K+L
Sbjct: 770 ERPYKALRYHSRAVRAVAYHPRFPLFASAADDGTVHVYHGTVYSDLLQNALLVPLKILRG 829
Query: 296 FIGKCSGSIRSIARHPTLPIIASCGLDSYLRFW 328
+ + + SIA HPTLP + S G D R W
Sbjct: 830 HAVQDALGVLSIAWHPTLPWLVSAGADGDARLW 862
>sp|Q6FU05|NSA1_CANGA Ribosome biogenesis protein NSA1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NSA1 PE=3 SV=1
Length = 436
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 44/257 (17%)
Query: 180 GGKGVEVNVWDL----DKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLS--------IDDH 227
GG+ V +++L DK IW +K + L + P W + FL D +
Sbjct: 184 GGEENLVKLFELSESCDKISMIWESKNVKNDRLDMRVPVWPVALKFLQPVPTSSAGYDKN 243
Query: 228 R---KFVAGTNDHQVRLYDTSAQRRPVMSFDF--RETPIKAVAEEPDSFNI----YIGN- 277
+ +F+ T +Y+T +RP+ D P++ + S N +GN
Sbjct: 244 KLNFQFLVVTGWSHFGIYNTQHGKRPMKYLDLLPEREPLRQLELLDPSHNTKAITQLGNL 303
Query: 278 -----GSGDLASVDIRT--------GKLLGCF-IGKCSGSIRSIARHPTLPIIASCGLDS 323
S + + D +T G+L+G + G +G I H ++ GLD
Sbjct: 304 KCKETESLEFITTDKKTQVLKYNGQGQLIGKYGKGDITGLATYIGIHDQKYLLEG-GLDR 362
Query: 324 YLRFWDIKTRQLLSAVFLKQHLNEV-VFDSAF-ADKEVANAAADAPMLEIQNGNDTQEDA 381
YLR +DI++R + ++L ++N + V D A +E+ A + Q +D ++DA
Sbjct: 363 YLRVFDIESRAQKAKIYLGTNINRILVLDEELEALQEIEMAKNNKRK---QTASDEEDDA 419
Query: 382 TETLPVKRKEAPEEKDR 398
E + E +EK R
Sbjct: 420 EELWS--KLETKKEKKR 434
>sp|Q6ZMW3|EMAL6_HUMAN Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens
GN=EML6 PE=2 SV=2
Length = 1958
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRET-------PIKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+DT +P+ D RET I++V + D + G ++
Sbjct: 250 FATGGRDGCIRLWDTDF--KPITKIDLRETEQGYKGLSIRSVCWKAD--RLLAGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFL 341
V +R K + G C G + ++A HP P+ + D +R W + L++ +
Sbjct: 306 FEVIVRERDKPMLILQGHCEGELWALALHPKKPLAVTGSDDRSVRLWSLADHALIARCNM 365
Query: 342 KQHLNEVVFDSAFADKEVANAAADAPMLEIQNGNDTQEDATETLPVK-RKEAPEE 395
++ + V F ++A D + ++ D TE + +K RKE E
Sbjct: 366 EEAVRSVAFSP--DGSQLALGMKDGSFIVLR-----VRDMTEVVHIKDRKEVIHE 413
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 220 AFLSIDDHRKFVAGTNDHQVRLYD--------TSAQRRPVMS-----FDFRETP-IKAVA 265
A ++D + FV G D V L+D T A +R +S + P I+A+
Sbjct: 908 AMYALD--KGFVTGGKDGIVELWDDMFERCLKTYAIKRSALSTSSKGLLLEDNPSIRAIT 965
Query: 266 EEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYL 325
+I +G +G++ +D ++G + G G + +A HP LPI A+ D L
Sbjct: 966 LGHG--HILVGTKNGEILEID-KSGPMTLLVQGHMEGEVWGLAAHPLLPICATVSDDKTL 1022
Query: 326 RFWDIKTRQLLSAV 339
R W++ + + AV
Sbjct: 1023 RIWELSAQHRMLAV 1036
Score = 32.0 bits (71), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 273 IYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKT 332
I +G G++ V + G G I +A HP+ + S D R WD+
Sbjct: 1659 ILVGTKDGEIIEVGEKNAASNILIDGHMEGEIWGLATHPSKDLFISASNDGTARIWDLAD 1718
Query: 333 RQLLSAVFL 341
++LL+ V L
Sbjct: 1719 KKLLNKVSL 1727
>sp|Q5SQM0|EMAL6_MOUSE Echinoderm microtubule-associated protein-like 6 OS=Mus musculus
GN=Eml6 PE=2 SV=1
Length = 1958
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRET-------PIKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+DT +P+ D RET I++V + D + G ++
Sbjct: 250 FATGGRDGCIRLWDTDF--KPITKIDLRETEQGYKGLSIRSVCWKAD--RLLAGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFL 341
V +R K + G C G + ++A HP P+ + D +R W + L++ +
Sbjct: 306 FEVIVRERDKPMLILQGHCEGELWALALHPKKPLAVTGSDDRSVRLWSLADHALIARCNM 365
Query: 342 KQHLNEVVFDSAFADKEVANAAADAPMLEIQNGNDTQEDATETLPVK-RKEAPEE 395
++ + V F ++A D + ++ D TE + +K RKE E
Sbjct: 366 EEAVRSVSFSP--DGSQLALGMKDGSFIVLR-----VRDMTEVVHIKDRKEVIHE 413
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 19/134 (14%)
Query: 220 AFLSIDDHRKFVAGTNDHQVRLYD--------TSAQRRPVMS-----FDFRETP-IKAVA 265
A ++D + FV G D V L+D T A +R +S + P I+A+
Sbjct: 908 AMYALD--KGFVTGGKDGIVELWDDMFERCLKTYAIKRTALSTSSKGLLLEDNPSIRAIT 965
Query: 266 EEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYL 325
+I +G +G++ +D ++G + G G + +A HP LPI A+ D L
Sbjct: 966 LGHG--HILVGTKNGEILEID-KSGPMTLLVQGHMEGEVWGLAAHPLLPICATVSDDKTL 1022
Query: 326 RFWDIKTRQLLSAV 339
R W++ ++ + AV
Sbjct: 1023 RIWELSSQHRMLAV 1036
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 273 IYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKT 332
I +G G++ V ++ G G I +A HP+ + S D R WD+
Sbjct: 1659 ILVGTKDGEIIEVGEKSAASNILIDGHMEGEIWGLATHPSKDMFISASNDGTARIWDLAD 1718
Query: 333 RQLLSAVFL 341
++LL+ V L
Sbjct: 1719 KKLLNKVNL 1727
>sp|Q32LN7|WDR61_BOVIN WD repeat-containing protein 61 OS=Bos taurus GN=WDR61 PE=2 SV=1
Length = 305
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ ++I + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
I TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
>sp|Q54J37|STRN_DICDI Striatin homolog OS=Dictyostelium discoideum GN=strn PE=3 SV=1
Length = 827
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 18/158 (11%)
Query: 186 VNVWDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDT 244
V++W+ E+++T + +S G+ + PT S A + +++RK + ND + L+D
Sbjct: 636 VSLWNTTTSEQLYTLQ----HSNGLSYIPT---SIALPATENNRKLLTSYNDGSILLFDL 688
Query: 245 SAQR---------RPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGC 295
Q+ + + + I + P G+ + D+ + ++
Sbjct: 689 ETQQIISQLKQGSSNNNNNNNNNSQINKIVSHPFMPLAMTGSEDHKIEFFDLNSNTVVHS 748
Query: 296 FIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
I S SI S+ P+ IASC DS +RFWDI ++
Sbjct: 749 MIAH-SNSISSLTIDPSGLYIASCAHDSSIRFWDISSK 785
>sp|Q9GZS3|WDR61_HUMAN WD repeat-containing protein 61 OS=Homo sapiens GN=WDR61 PE=1 SV=1
Length = 305
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ ++I + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
I TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 217 TSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIG 276
S+ L R G +D +V L+ + + +MS TP+++V I G
Sbjct: 23 VSSVVLGRSSGRLVATGGDDCRVHLWSVN-KPNCIMSLTGHTTPVESVRFNNSEELIVAG 81
Query: 277 NGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
+ SG L D+ K+L +G ++ S+ HP +AS LD+ ++ WD++ +
Sbjct: 82 SQSGSLRIWDLEAAKILRTLMGH-KANVSSLDFHPYGEFVASGSLDTNIKLWDVRRK 137
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 173 SEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVA 232
SE+ + G + + +WDL+ + + T N + L + +FVA
Sbjct: 74 SEELIVAGSQSGSLRIWDLEAAKILRTLMGHKAN------------VSSLDFHPYGEFVA 121
Query: 233 -GTNDHQVRLYDTSAQRRPVMSFDFR--ETPIKAVAEEPDSFNIYIGNGSGDLASVDIRT 289
G+ D ++L+D RR F ++ ++ + PD + + + D+
Sbjct: 122 SGSLDTNIKLWDV---RRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTA 178
Query: 290 GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLL 336
GK++ + + G + I HP ++AS D +RFWD++ QL+
Sbjct: 179 GKMMA-ELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLV 224
>sp|Q8BQM8|EMAL5_MOUSE Echinoderm microtubule-associated protein-like 5 OS=Mus musculus
GN=Eml5 PE=2 SV=2
Length = 1977
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Query: 228 RKFVAGTNDHQVRLYDTSAQR----RPVMSFDFRETPIKAVAEEPDSF--------NIYI 275
+ FV G D V L+D S +R + D + E+ S +I +
Sbjct: 914 KGFVTGGKDGMVALWDDSFERCLKTYAIKRADLAPGSKGLLLEDNPSIRAISLGHGHILV 973
Query: 276 GNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
G +G++ VD ++G + G G + +A HP LPI A+ D LR WD+
Sbjct: 974 GTKNGEILEVD-KSGPITLLVQGHMEGEVWGLATHPYLPICATVSDDKTLRIWDLSPSHC 1032
Query: 336 LSAV 339
+ AV
Sbjct: 1033 MLAV 1036
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRET-------PIKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+D + +P+ D RET +++V D +I +G ++
Sbjct: 250 FATGGRDGCIRLWDLTF--KPITVIDLRETEQGYKGLSVRSVCWRGD--HILVGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFL 341
+ + K G C G + ++A HPT P+ + D +R W + L++
Sbjct: 306 FEIVVHERNKPFLIMQGHCEGELWALAVHPTKPLAVTGSDDRSVRIWSLVDHALIA---- 361
Query: 342 KQHLNEVVFDSAFADKEVANAAADAPMLEIQNGNDT---QEDATETLPVK-RKEAPEE 395
+ ++ E + +A N L +++G+ T D TE + +K RKEA E
Sbjct: 362 RCNMEEPIRCAA------VNVDGIHLALGMKDGSFTVLRVRDMTEVVHIKDRKEAIHE 413
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVF 350
G G I +A HP+ S D +R WDI +++L+ V L V +
Sbjct: 1699 GHVDGPIWGLATHPSRDFFLSAAEDGTVRLWDIADKKMLNKVNLGHAARTVCY 1751
>sp|O13615|PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp5 PE=1 SV=1
Length = 473
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRT 289
F G D ++++D ++ ++ ++ +A P ++ + D+ T
Sbjct: 178 FCTGAGDRTIKIWDLASGVLK-LTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLET 236
Query: 290 GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQ 334
K++ + G SG + ++ HPTL ++ + G D+ R WD++TRQ
Sbjct: 237 NKVIRHYHGHLSG-VYALKLHPTLDVLVTAGRDAVARVWDMRTRQ 280
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 261 IKAVAEEPDSFNIYIGNGSGD--LASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIAS 318
++ V EP N + G+GD + D+ +G L G + ++R +A P P + S
Sbjct: 166 VRCVDVEPG--NQWFCTGAGDRTIKIWDLASGVLKLTLTGHIA-TVRGLAVSPRHPYLFS 222
Query: 319 CGLDSYLRFWDIKTRQL-------LSAVF-LKQH 344
CG D ++ WD++T ++ LS V+ LK H
Sbjct: 223 CGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLH 256
>sp|Q75BY3|PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PRP46
PE=3 SV=2
Length = 425
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 226 DHRKFVAGTNDHQVRLYDTSAQRRPVM----SFDFRETPIKAVAEEPDSFNIYIGNGSGD 281
D+ F G+ND +R++D + + V R+ I A P Y+ + S D
Sbjct: 125 DNAWFATGSNDSTIRVWDLATGKLKVTLQGHIMTVRDICISA--RHP-----YMFSASQD 177
Query: 282 --LASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
+ D+ ++ F G SG + S+ HP+L +I S G DS +R WDI++R
Sbjct: 178 KLVKCWDLERNTVVRDFHGTLSG-VHSVDLHPSLDLIVSAGRDSVVRVWDIRSR 230
>sp|Q9NVX2|NLE1_HUMAN Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=4
Length = 485
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 229 KFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIR 288
+ V+G++D + L+ + ++P+ + I V PDS + + + D R
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGR 402
Query: 289 TGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEV 348
TGK L G + ++ IA ++ S DS L+ WD+K ++L A+ L H +EV
Sbjct: 403 TGKYLASLRGHVA-AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL--AMDLPGHADEV 459
>sp|Q4V7A0|WDR61_RAT WD repeat-containing protein 61 OS=Rattus norvegicus GN=Wdr61 PE=1
SV=1
Length = 305
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ +++ + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQHLATGTHMGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
I TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
>sp|Q6CKE8|PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=PRP46 PE=3 SV=1
Length = 434
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 226 DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASV 285
D+ F G+ND ++++D +A + + + ++ +A ++ + +
Sbjct: 134 DNEWFATGSNDTTIKIWDLAAGKLKI-TLIGHVMSVRDIAISKRHPYMFSASEDKLVKCW 192
Query: 286 DIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
D+ + F G SG + ++ HP+L IIA+ G D+ +R WDI++R
Sbjct: 193 DLERNTAIRDFHGHLSG-VHTVDVHPSLDIIATAGRDAVVRLWDIRSR 239
>sp|Q5RFF8|NLE1_PONAB Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3
Length = 485
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 229 KFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIR 288
+ V+G++D + L+ + ++P+ + I V PDS + + + D R
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGR 402
Query: 289 TGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEV 348
TGK L G + ++ IA ++ S DS L+ WD+K ++L A+ L H +EV
Sbjct: 403 TGKYLASLRGHVA-AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL--AMDLPGHADEV 459
>sp|Q05BV3|EMAL5_HUMAN Echinoderm microtubule-associated protein-like 5 OS=Homo sapiens
GN=EML5 PE=2 SV=3
Length = 1969
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 25/130 (19%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDS----------------- 270
+ FV G D V L+D S +R + IK A P S
Sbjct: 914 KGFVTGGKDGIVALWDDSFERC------LKTYAIKRAALAPGSKGLLLEDNPSIRAISLG 967
Query: 271 -FNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWD 329
+I +G +G++ VD ++G + G G + +A HP LPI A+ D LR WD
Sbjct: 968 HGHILVGTKNGEILEVD-KSGPITLLVQGHMEGEVWGLATHPYLPICATVSDDKTLRIWD 1026
Query: 330 IKTRQLLSAV 339
+ + AV
Sbjct: 1027 LSPSHCMLAV 1036
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRET-------PIKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+D + +P+ D RET +++V D +I +G ++
Sbjct: 250 FATGGRDGCIRLWDLTF--KPITVIDLRETDQGYKGLSVRSVCWRGD--HILVGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFL 341
+ ++ K G C G + ++A HPT P+ + D +R W + L++
Sbjct: 306 FEIVVQERNKPFLIMQGHCEGELWALAVHPTKPLAVTGSDDRSVRIWSLVDHALIA---- 361
Query: 342 KQHLNEVVFDSAFADKEVANAAADAPMLEIQNGNDT---QEDATETLPVK-RKEAPEE 395
+ ++ E + +A NA L +++G+ T D TE + +K RKEA E
Sbjct: 362 RCNMEEPIRCAA------VNADGIHLALGMKDGSFTVLRVRDMTEVVHIKDRKEAIHE 413
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVF 350
G G I +A HP+ S D +R WDI +++L+ V L V +
Sbjct: 1691 GHVDGPIWGLATHPSRDFFLSAAEDGTVRLWDIADKKMLNKVNLGHAARTVCY 1743
>sp|Q9ERF3|WDR61_MOUSE WD repeat-containing protein 61 OS=Mus musculus GN=Wdr61 PE=2 SV=1
Length = 305
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ +++ + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQYLATGTHMGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
I TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 254 FDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTL 313
F+ + T K +A P + + S + D R G LL F G +R + HPT
Sbjct: 7 FESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRF-EDHEGPVRGLDFHPTQ 65
Query: 314 PIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVFDSAFADKEV--ANAAADAPMLEI 371
PI S G D ++ W + T + L L HL+ V + F +E+ +A+D + I
Sbjct: 66 PIFVSAGDDYTIKVWSLDTNKCLYT--LTGHLDYV--RTVFFHRELPWIISASDDQTIRI 121
Query: 372 QNGNDTQEDATET 384
N + +E A T
Sbjct: 122 WNWQNRKEIACLT 134
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 191 LDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRP 250
LD+ ++W + W AF D + +G+ND V+L+D +
Sbjct: 914 LDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSP--DRQILASGSNDKTVKLWDWQTGKY- 970
Query: 251 VMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCF--IGKCSGSIRSIA 308
+ S + I +A PDS + + + +I TG+ CF + + + + ++
Sbjct: 971 ISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQ---CFQILLEHTDWVYAVV 1027
Query: 309 RHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVFDSAFADKE-VANAAAD 365
HP IIA+ D ++ W+I T Q L L +H ++++ + D + +A+A+AD
Sbjct: 1028 FHPQGKIIATGSADCTVKLWNISTGQCLKT--LSEHSDKILGMAWSPDGQLLASASAD 1083
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 281 DLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVF 340
+L VD L C + G+I S A P ++A+C D ++R W++K+ +LL +
Sbjct: 622 NLHDVDFANSDLSCCVFTETLGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLL--LI 679
Query: 341 LKQHLNEVVFDSAFADKEV-ANAAAD 365
+ H N V F D E+ A+ AD
Sbjct: 680 CRGHSNWVRFVVFSPDGEILASCGAD 705
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 215 WFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIY 274
W S AF + D + +G+ D +++++ + ++ + ++A PDS I
Sbjct: 812 WVRSVAFSA--DGQTLASGSGDRTIKIWNYHTGE-CLKTYIGHTNSVYSIAYSPDS-KIL 867
Query: 275 IGNGSGDLASVDIRTGKLLGCFIGKC-------SGSIRSIARHPTLPIIASCGLDSYLRF 327
+ +GSGD RT KL C C + + S+A P +A LD +R
Sbjct: 868 V-SGSGD------RTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRL 920
Query: 328 WDIKTRQLLSAVF 340
W+ +T Q L A +
Sbjct: 921 WNCRTGQCLKAWY 933
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 229 KFVA-GTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
K +A G+ D V+L++ S + + + I +A PD + + + D
Sbjct: 1033 KIIATGSADCTVKLWNISTGQ-CLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDC 1091
Query: 288 RTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNE 347
TG+ +G G S + S P IIA+C D ++ WD + + L L H N
Sbjct: 1092 CTGRCVGILRGH-SNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKT--LTGHTNW 1148
Query: 348 VVFDSAFA--DKEVANAAAD 365
VFD AF+ K +A+A+ D
Sbjct: 1149 -VFDIAFSPDGKILASASHD 1167
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 286 DIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHL 345
++++GKLL G S +R + P I+ASCG D ++ W ++ + L H
Sbjct: 670 EVKSGKLLLICRGH-SNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKT--LTGHE 726
Query: 346 NEVVFDSAFA--DKEVANAAAD--APMLEIQNGNDTQ 378
+E VF AF + +A+A+ D + +IQ+G Q
Sbjct: 727 HE-VFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQ 762
>sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=4
Length = 485
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 229 KFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIR 288
+ V+G++D + L+ + ++P+ + I V PDS + + + D R
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGR 402
Query: 289 TGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEV 348
TGK L G + ++ IA ++ S DS L+ WD+K ++L A L H +EV
Sbjct: 403 TGKYLASLRGHVA-AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL--ATDLPGHADEV 459
>sp|P49177|GBB_ARATH Guanine nucleotide-binding protein subunit beta OS=Arabidopsis
thaliana GN=GB1 PE=1 SV=1
Length = 377
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRT 289
F++G+ D RL+DT A R V +F E + V PD + G+ G DIRT
Sbjct: 220 FISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Query: 290 GKLL 293
G L
Sbjct: 280 GHQL 283
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 49/208 (23%)
Query: 145 VSAESSCSTVKSWNVCASGTIAFSKVDISEKFS-----LFGGKGVEVNVWDLDKCEKIWT 199
V+ +C V +N+ T+ V KFS L G NV+D+ +K++T
Sbjct: 292 VTYNPACKRV--FNINLVHTLEHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFT 349
Query: 200 ---AKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQR-RPVMSFD 255
P P L + T AF D + V GT D Q++L+D S Q+ R V S
Sbjct: 350 LHEESPDPSRDLYVRT------IAFSP--DGKYLVTGTEDRQIKLWDLSTQKVRYVFS-- 399
Query: 256 FRETPIKAVAEEPDSFNI-------YIGNGSGDLASVDIRTGKLLGCFIGKC------SG 302
E D +++ +I +GSGD RT +L G+C
Sbjct: 400 ---------GHEQDIYSLDFSHNGRFIVSGSGD------RTARLWDVETGQCILKLEIEN 444
Query: 303 SIRSIARHPTLPIIASCGLDSYLRFWDI 330
+ +IA P IA LD +R W +
Sbjct: 445 GVTAIAISPNDQFIAVGSLDQIIRVWSV 472
>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3
Length = 486
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 229 KFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIR 288
+ V+G++D + L+ + ++P+ + I V PDS I + + D R
Sbjct: 344 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGR 403
Query: 289 TGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEV 348
TGK L G + ++ IA ++ S DS L+ WD+K ++L + L H +EV
Sbjct: 404 TGKYLASLRGHVA-AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL--STDLPGHADEV 460
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 159 VCASGTIAFSKVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTS 218
+ ++GT + +DI SL GG V ++D +K + + T K K +
Sbjct: 206 IHSTGTPGITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKK----------IN 255
Query: 219 AAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNG 278
A L D+ A + H +R++ + + D + P+ ++ I +
Sbjct: 256 AVVLHPDNITAISASADSH-IRVWSATDSSSKAI-IDVHQAPVTDISLNASGDYILSASD 313
Query: 279 SGDLASVDIRTGKLLGCFIGKCSGS---IRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
A DIR+GK L C + GS + SI HP I + D+ ++ WD+K Q
Sbjct: 314 DSYWAFSDIRSGKSL-CKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLK-NQT 371
Query: 336 LSAVF 340
++A F
Sbjct: 372 VAAAF 376
>sp|Q6ED65|EMAL5_RAT Echinoderm microtubule-associated protein-like 5 OS=Rattus norvegicus
GN=Eml5 PE=1 SV=2
Length = 1977
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Query: 228 RKFVAGTNDHQVRLYDTSAQR----RPVMSFDFRETPIKAVAEEPDSF--------NIYI 275
+ FV G D V L+D S +R + D + E+ S +I +
Sbjct: 914 KGFVTGGKDGVVALWDDSFERCLKTYAIKRADLAPGSKGLLLEDNPSIRAISLGHGHILV 973
Query: 276 GNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
G +G++ VD ++G + G G + +A HP LPI A+ D LR WD+
Sbjct: 974 GTKNGEILEVD-KSGPVTLLVQGHMEGEVWGLATHPYLPICATVSDDKTLRIWDLSPSHC 1032
Query: 336 LSAV 339
+ AV
Sbjct: 1033 MLAV 1036
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRET-------PIKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+D + +P+ D RET +++V D +I +G ++
Sbjct: 250 FATGGRDGCIRLWDLTF--KPITVIDLRETEQGYKGLSVRSVCWRGD--HILVGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFL 341
+ + K G C G + ++A HPT P+ + D +R W + L++
Sbjct: 306 FEIVVHERNKPFLIMQGHCEGELWALAVHPTKPLAVTGSDDRSVRIWSLVDHALIA---- 361
Query: 342 KQHLNEVVFDSAFADKEVANAAADAPMLEIQNGNDT---QEDATETLPVK-RKEAPEE 395
+ +++E + +A NA L +++G+ T D TE + +K RKEA E
Sbjct: 362 RCNMDEPIRCAA------VNADGVHLALGMKDGSLTVLRVRDMTEVVHIKDRKEAIHE 413
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHLNEVVF 350
G G I +A HP+ S D +R WDI +++L+ V L V +
Sbjct: 1699 GHVDGPIWGLATHPSRDFFLSAAEDGTVRLWDIADKKMLNKVNLGHAARTVCY 1751
>sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana
GN=PRL1 PE=1 SV=1
Length = 486
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 215 WFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIY 274
W S AF ++ F G+ D ++++D + + E ++ +A ++
Sbjct: 178 WVRSVAFDPSNEW--FCTGSADRTIKIWDVATGVLKLTLTGHIEQ-VRGLAVSNRHTYMF 234
Query: 275 IGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQ 334
+ D+ K++ + G SG + +A HPTL ++ + G DS R WDI+T+
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSG-VYCLALHPTLDVLLTGGRDSVCRVWDIRTKM 293
Query: 335 LLSAVFLKQHLNEV--VFDSAFADKEVANAAAD 365
+ A L H N V VF D +V + D
Sbjct: 294 QIFA--LSGHDNTVCSVFTRP-TDPQVVTGSHD 323
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASV- 285
H + +D QV+ +D Q + + S+ + + +A P + ++ + G + V
Sbjct: 230 HTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLALHP-TLDVLLTGGRDSVCRVW 287
Query: 286 DIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQHL 345
DIRT + G ++ S+ PT P + + D+ ++FWD++ + +S + H
Sbjct: 288 DIRTKMQIFALSGH-DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTL---THH 343
Query: 346 NEVVFDSAFADKEVANAAADA 366
+ V KE A A+A A
Sbjct: 344 KKSVRAMTLHPKENAFASASA 364
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 38/272 (13%)
Query: 83 LNGDLRVAISNAGDSGAQPEDDGIVGLHLFKRQREESSSRSRTLLTCTTKGKAS-MRSIE 141
L L VA S G A + GIV R ++ + LLTC KG S + S+
Sbjct: 864 LGSVLTVAFSPDGKLFATGDSGGIV--------RFWEAATGKELLTC--KGHNSWVNSVG 913
Query: 142 VTK----VSAESSCSTVKSWNVCASGTIAFSKVDISEKFSLF----------GGKGVEVN 187
++ +++ S TV+ W++ + + K S S+ G V
Sbjct: 914 FSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVR 973
Query: 188 VWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQ 247
+WD+ E ++ + W S AF D G+ D VRL+D S+
Sbjct: 974 LWDISSGECLYIFQGHTG---------WVYSVAFNL--DGSMLATGSGDQTVRLWDISSS 1022
Query: 248 RRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSI 307
+ + F + +++V D + G+ + DI +G L G S +RS+
Sbjct: 1023 QCFYI-FQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS-CVRSV 1080
Query: 308 ARHPTLPIIASCGLDSYLRFWDIKTRQLLSAV 339
P ++AS G D +R WDI + L +
Sbjct: 1081 VFSPDGAMLASGGDDQIVRLWDISSGNCLYTL 1112
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 186 VNVWDLD--KCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYD 243
V +WD+ KC I NS+ +F P D +G++D VRL++
Sbjct: 1182 VRLWDISSSKCLYILQGHTSWVNSV-VFNP------------DGSTLASGSSDQTVRLWE 1228
Query: 244 TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGS 303
++ + + +F + + +V PD + G+ + DI + K L F G +
Sbjct: 1229 INSSK-CLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGH-TNW 1286
Query: 304 IRSIARHPTLPIIASCGLDSYLRFWDIKTRQLL 336
+ S+A +P ++AS D +R W+I + + L
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCL 1319
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 214 TWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNI 273
+W S F D +G++D VRL+D S+ + + +F + +VA PD +
Sbjct: 1243 SWVNSVVFNP--DGSMLASGSSDKTVRLWDISSSK-CLHTFQGHTNWVNSVAFNPDGSML 1299
Query: 274 YIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
G+G + +I + K L F G S + S+ P ++AS D +R W I +
Sbjct: 1300 ASGSGDQTVRLWEISSSKCLHTFQGHTSW-VSSVTFSPDGTMLASGSDDQTVRLWSISSG 1358
Query: 334 QLLSAVFLKQHLNEV 348
+ L FL H N V
Sbjct: 1359 ECLYT-FLG-HTNWV 1371
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 186 VNVWDLDKCEKIWTAKPPPKNSLG--IFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYD 243
V +W + E ++T N +G IF+P D +G+ D VRL+
Sbjct: 1350 VRLWSISSGECLYTFLGHT-NWVGSVIFSP------------DGAILASGSGDQTVRLWS 1396
Query: 244 TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGS 303
S+ + + + + ++ PD + G+ + +I +G+ L G + S
Sbjct: 1397 ISSGK-CLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHIN-S 1454
Query: 304 IRSIARHPTLPIIASCGLDSYLRFWDIKT 332
+RS+A I+AS D ++ WD+KT
Sbjct: 1455 VRSVAFSSDGLILASGSDDETIKLWDVKT 1483
>sp|Q5ZJH5|WDR61_CHICK WD repeat-containing protein 61 OS=Gallus gallus GN=WDR61 PE=2 SV=1
Length = 305
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS S+ ++ ++ WDL+ ++I + P ++ + F+P D
Sbjct: 70 VDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ G++ +V ++ ++ S D R I ++A PD + G G + D
Sbjct: 118 SQFLATGSHVGKVNIFGVETGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
I TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 169 KVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHR 228
++ E+ + G + + VWDL+ + + T LG A S+D H
Sbjct: 70 QISAKEELIVAGSQSGSIRVWDLEAAKILRTL-------LG-------HKANICSLDFHP 115
Query: 229 --KFVA-GTNDHQVRLYDTSAQRRPVMSFDFRE--TPIKAVAEEPDSFNIYIGNGSGDLA 283
FVA G+ D ++L+D RR F ++ ++ + PD + +
Sbjct: 116 YGSFVASGSLDTDIKLWDV---RRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 284 SVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAV 339
D+ GK++ F G SG + + HP+ ++AS D +RFWD++ ++S +
Sbjct: 173 LWDLTAGKVMFEFTGH-SGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCI 227
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
R G +D +V ++ + + VMS TPI+++ I G+ SG + D+
Sbjct: 34 RLLATGGDDCRVNVWSVN-KPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 288 RTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
K+L +G +I S+ HP +AS LD+ ++ WD++ +
Sbjct: 93 EAAKILRTLLGH-KANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 217 TSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIG 276
S+ L R G +D +V L+ + + +MS TP+++V I G
Sbjct: 23 VSSVVLGKSSGRLVATGGDDCRVNLWSVN-KPNCIMSLTGHTTPVESVRFNNAEELIVAG 81
Query: 277 NGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
+ SG L D+ K+L +G ++ S+ HP +AS LD+ ++ WD++ +
Sbjct: 82 SQSGSLRVWDLEAAKILRTLMGH-KANVCSLDFHPYGDFVASGSLDTNIKLWDVRRK 137
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 173 SEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRK--F 230
+E+ + G + + VWDL+ + + T +G A S+D H F
Sbjct: 74 AEELIVAGSQSGSLRVWDLEAAKILRTL-------MG-------HKANVCSLDFHPYGDF 119
Query: 231 VA-GTNDHQVRLYDTSAQRRPVMSFDFR--ETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
VA G+ D ++L+D RR F ++ ++ + PD + + + D+
Sbjct: 120 VASGSLDTNIKLWDV---RRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDL 176
Query: 288 RTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLL 336
GK++ + + G + I HP ++AS D +RFWD++ QL+
Sbjct: 177 TAGKMMA-ELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLI 224
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 185 EVNVWDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYD 243
+ +WDL+ ++I + P ++ + F+P D + G++ +V ++
Sbjct: 87 HIRLWDLETGKQIKSMDAGPVDAWTVAFSP------------DSKYIATGSHLGKVNIFG 134
Query: 244 TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGS 303
+ ++ S D R I ++A PD + G G + DI TGKLL G
Sbjct: 135 VESGKKE-HSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM-P 192
Query: 304 IRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
IRS+ P ++ + D Y++ +D++ L
Sbjct: 193 IRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 226 DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASV 285
D + +G D + ++D A + + + + PI+++ PDS + + G +
Sbjct: 159 DGKYLASGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 286 DIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVFLKQ 343
D++ L G G S + S+A P S D ++ WD +R ++ F Q
Sbjct: 218 DVQHANLAGTLSGHGSW-VLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQ 274
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 184 VEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTN-DHQVRLY 242
V+V W +K E WT + + LG+ + ++I + A ++ D +RL+
Sbjct: 44 VKVWKWSDEKLELQWTLE---GHQLGVVS---------VNISQNGAIAASSSLDAHIRLW 91
Query: 243 DTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGK------LLGCF 296
D ++ + S D VA PDS I G+ G + + +GK G F
Sbjct: 92 DLETGKQ-IKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKF 150
Query: 297 IGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLL 336
I SIA P +AS +D + +DI T +LL
Sbjct: 151 I-------LSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,005,013
Number of Sequences: 539616
Number of extensions: 6794693
Number of successful extensions: 46059
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 449
Number of HSP's that attempted gapping in prelim test: 40719
Number of HSP's gapped (non-prelim): 4007
length of query: 430
length of database: 191,569,459
effective HSP length: 120
effective length of query: 310
effective length of database: 126,815,539
effective search space: 39312817090
effective search space used: 39312817090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)