Query 014157
Match_columns 429
No_of_seqs 510 out of 3563
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 06:30:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 3.2E-40 1.1E-44 321.1 32.3 310 85-429 11-320 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 1.2E-34 4.1E-39 283.1 34.4 305 88-428 6-314 (334)
3 2v8q_E 5'-AMP-activated protei 100.0 8.3E-35 2.8E-39 283.8 27.9 300 92-428 23-322 (330)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 2.5E-32 8.7E-37 259.3 24.7 268 106-427 5-279 (280)
5 3ddj_A CBS domain-containing p 100.0 2E-31 6.7E-36 255.8 18.0 262 104-428 20-284 (296)
6 2yzq_A Putative uncharacterize 100.0 3.9E-29 1.3E-33 237.8 15.7 256 114-428 9-278 (282)
7 3kh5_A Protein MJ1225; AMPK, A 99.9 6.2E-23 2.1E-27 194.4 19.1 195 203-428 9-204 (280)
8 3ddj_A CBS domain-containing p 99.9 9.2E-23 3.2E-27 195.3 13.5 192 200-428 22-213 (296)
9 2v8q_E 5'-AMP-activated protei 99.9 2.1E-21 7.3E-26 188.8 16.9 207 201-428 38-250 (330)
10 3t4n_C Nuclear protein SNF4; C 99.8 1.1E-20 3.9E-25 183.0 15.4 202 205-428 39-247 (323)
11 2yzq_A Putative uncharacterize 99.8 6.2E-21 2.1E-25 181.0 10.6 173 203-424 6-179 (282)
12 2qrd_G Protein C1556.08C; AMPK 99.8 4.5E-20 1.5E-24 179.6 14.2 209 201-428 25-242 (334)
13 4esy_A CBS domain containing m 99.8 5.8E-20 2E-24 161.5 9.3 125 290-429 20-162 (170)
14 3i8n_A Uncharacterized protein 99.8 3.3E-18 1.1E-22 143.3 12.3 119 290-429 8-129 (130)
15 3nqr_A Magnesium and cobalt ef 99.8 1.5E-18 5E-23 144.8 9.5 119 290-429 5-126 (127)
16 3k6e_A CBS domain protein; str 99.8 1.5E-18 5.2E-23 150.4 9.6 117 296-428 25-141 (156)
17 3lv9_A Putative transporter; C 99.8 5.6E-18 1.9E-22 145.1 12.3 119 289-429 24-145 (148)
18 3hf7_A Uncharacterized CBS-dom 99.7 5.7E-18 2E-22 141.9 11.4 121 290-429 4-127 (130)
19 3kpb_A Uncharacterized protein 99.7 5.7E-18 2E-22 139.8 10.8 118 290-429 3-120 (122)
20 3lhh_A CBS domain protein; str 99.7 2E-17 7E-22 145.5 13.8 119 289-429 43-164 (172)
21 3jtf_A Magnesium and cobalt ef 99.7 4.2E-18 1.4E-22 142.5 8.9 117 290-429 7-126 (129)
22 1pbj_A Hypothetical protein; s 99.7 2.7E-17 9.4E-22 136.1 13.2 119 290-428 3-121 (125)
23 2rih_A Conserved protein with 99.7 2E-17 6.9E-22 140.3 11.3 120 288-427 5-126 (141)
24 3lfr_A Putative metal ION tran 99.7 6E-18 2.1E-22 142.9 7.6 120 290-429 5-127 (136)
25 3k2v_A Putative D-arabinose 5- 99.7 3.9E-17 1.3E-21 140.0 12.7 118 289-425 29-148 (149)
26 3gby_A Uncharacterized protein 99.7 1.1E-17 3.9E-22 139.5 9.0 120 289-428 6-125 (128)
27 2nyc_A Nuclear protein SNF4; b 99.7 9.3E-17 3.2E-21 136.3 14.7 124 294-428 17-140 (144)
28 2uv4_A 5'-AMP-activated protei 99.7 5.3E-17 1.8E-21 139.6 13.1 135 274-428 16-150 (152)
29 1y5h_A Hypothetical protein RV 99.7 2.1E-17 7.2E-22 138.6 10.1 121 290-429 10-131 (133)
30 2p9m_A Hypothetical protein MJ 99.7 9.7E-17 3.3E-21 135.3 14.2 120 290-428 10-135 (138)
31 2o16_A Acetoin utilization pro 99.7 8.4E-17 2.9E-21 139.7 14.0 125 289-428 6-134 (160)
32 3fv6_A YQZB protein; CBS domai 99.7 5.3E-17 1.8E-21 140.8 12.4 120 290-428 19-143 (159)
33 4gqw_A CBS domain-containing p 99.7 3.4E-17 1.2E-21 140.2 11.0 127 289-429 6-143 (152)
34 2yzi_A Hypothetical protein PH 99.7 9.6E-17 3.3E-21 135.4 13.4 120 289-428 8-128 (138)
35 3oco_A Hemolysin-like protein 99.7 2.2E-17 7.4E-22 142.3 9.5 118 290-429 22-143 (153)
36 2ef7_A Hypothetical protein ST 99.7 8E-17 2.7E-21 135.0 12.1 120 289-428 5-124 (133)
37 3fhm_A Uncharacterized protein 99.7 4E-17 1.4E-21 142.5 10.3 121 290-428 26-149 (165)
38 3ocm_A Putative membrane prote 99.7 1.2E-16 4E-21 140.9 13.3 117 290-429 38-157 (173)
39 3ctu_A CBS domain protein; str 99.7 3.7E-17 1.3E-21 141.1 9.6 122 291-428 18-141 (156)
40 3l2b_A Probable manganase-depe 99.7 2.9E-16 9.9E-21 146.1 16.1 200 200-427 9-242 (245)
41 2pfi_A Chloride channel protei 99.7 1.4E-16 5E-21 138.2 13.1 130 290-428 15-146 (164)
42 1o50_A CBS domain-containing p 99.7 2E-16 6.9E-21 136.8 12.9 124 289-428 17-152 (157)
43 4fry_A Putative signal-transdu 99.7 1.4E-16 4.8E-21 137.6 11.8 123 287-428 6-134 (157)
44 1pvm_A Conserved hypothetical 99.7 1.5E-16 5.1E-21 141.4 12.2 123 289-428 10-132 (184)
45 3lqn_A CBS domain protein; csg 99.7 1.2E-16 4E-21 136.9 11.1 122 291-428 18-142 (150)
46 2rc3_A CBS domain; in SITU pro 99.7 1.2E-16 4E-21 134.4 10.8 121 290-429 8-131 (135)
47 4esy_A CBS domain containing m 99.7 5.1E-17 1.7E-21 142.6 8.3 155 92-261 6-161 (170)
48 3sl7_A CBS domain-containing p 99.7 1.3E-16 4.3E-21 140.8 10.8 125 290-428 6-155 (180)
49 2emq_A Hypothetical conserved 99.7 3.1E-16 1.1E-20 135.3 12.3 123 290-428 13-138 (157)
50 1yav_A Hypothetical protein BS 99.7 2.7E-16 9.3E-21 136.2 11.8 123 290-428 16-141 (159)
51 3kxr_A Magnesium transporter, 99.7 7.5E-16 2.6E-20 139.5 14.6 163 150-346 9-174 (205)
52 3kxr_A Magnesium transporter, 99.7 4.1E-16 1.4E-20 141.2 12.0 116 289-428 55-173 (205)
53 3oi8_A Uncharacterized protein 99.7 2.6E-16 8.8E-21 136.1 10.1 114 289-424 39-155 (156)
54 1vr9_A CBS domain protein/ACT 99.7 1E-15 3.5E-20 139.4 13.7 157 200-408 15-171 (213)
55 1vr9_A CBS domain protein/ACT 99.6 3.9E-16 1.3E-20 142.3 10.2 121 284-428 9-129 (213)
56 3lhh_A CBS domain protein; str 99.6 3.2E-15 1.1E-19 131.3 14.5 122 197-346 41-164 (172)
57 2d4z_A Chloride channel protei 99.6 5E-15 1.7E-19 137.8 16.1 139 289-429 14-246 (250)
58 2j9l_A Chloride channel protei 99.6 9.7E-16 3.3E-20 135.8 10.8 124 290-428 13-164 (185)
59 3kpb_A Uncharacterized protein 99.6 2.4E-15 8.3E-20 123.8 12.3 116 202-346 5-120 (122)
60 3lv9_A Putative transporter; C 99.6 4.8E-15 1.6E-19 126.7 14.5 120 199-346 24-145 (148)
61 3k6e_A CBS domain protein; str 99.6 3.3E-15 1.1E-19 129.3 11.2 119 205-346 24-142 (156)
62 3gby_A Uncharacterized protein 99.6 2.7E-15 9.4E-20 124.9 10.3 120 200-346 7-126 (128)
63 3i8n_A Uncharacterized protein 99.6 7.5E-15 2.6E-19 122.6 12.4 120 199-345 7-128 (130)
64 2ef7_A Hypothetical protein ST 99.6 1.8E-14 6.3E-19 120.4 13.6 120 200-346 6-125 (133)
65 2oux_A Magnesium transporter; 99.6 4E-15 1.4E-19 141.7 10.2 116 289-428 138-258 (286)
66 3jtf_A Magnesium and cobalt ef 99.6 6.1E-15 2.1E-19 123.1 9.9 115 202-345 9-125 (129)
67 3hf7_A Uncharacterized CBS-dom 99.6 6.3E-15 2.2E-19 123.2 10.0 119 203-346 7-127 (130)
68 1pbj_A Hypothetical protein; s 99.6 1.4E-14 4.6E-19 119.7 11.8 118 202-346 5-122 (125)
69 2o16_A Acetoin utilization pro 99.6 1.8E-14 6E-19 125.0 13.0 127 200-345 7-134 (160)
70 2yvy_A MGTE, Mg2+ transporter 99.6 6.7E-15 2.3E-19 139.6 10.9 115 290-428 137-256 (278)
71 3lfr_A Putative metal ION tran 99.6 4.5E-15 1.5E-19 125.1 8.7 118 202-345 7-126 (136)
72 2p9m_A Hypothetical protein MJ 99.6 1.8E-14 6.2E-19 121.2 12.1 120 200-345 10-135 (138)
73 2rih_A Conserved protein with 99.6 3.8E-14 1.3E-18 119.9 13.8 119 201-344 8-126 (141)
74 3nqr_A Magnesium and cobalt ef 99.6 5.1E-15 1.8E-19 123.1 8.2 116 202-344 7-124 (127)
75 3oco_A Hemolysin-like protein 99.6 1.3E-14 4.3E-19 124.9 10.8 118 201-346 23-143 (153)
76 2yzi_A Hypothetical protein PH 99.6 3.6E-14 1.2E-18 119.4 13.2 121 200-346 9-129 (138)
77 3fv6_A YQZB protein; CBS domai 99.6 2.7E-14 9.1E-19 123.6 12.6 121 200-346 19-144 (159)
78 3fhm_A Uncharacterized protein 99.6 1.9E-14 6.3E-19 125.4 11.6 116 206-346 35-150 (165)
79 4gqw_A CBS domain-containing p 99.6 6E-15 2.1E-19 126.0 8.1 135 200-346 7-143 (152)
80 3lqn_A CBS domain protein; csg 99.6 2E-14 6.7E-19 123.0 11.3 122 203-346 20-143 (150)
81 3oi8_A Uncharacterized protein 99.5 2.9E-14 9.9E-19 123.1 12.1 117 197-341 37-155 (156)
82 2yvy_A MGTE, Mg2+ transporter 99.5 6.3E-14 2.2E-18 132.9 15.3 132 184-346 121-257 (278)
83 3k2v_A Putative D-arabinose 5- 99.5 3.1E-14 1.1E-18 121.8 11.8 117 200-342 30-148 (149)
84 3ocm_A Putative membrane prote 99.5 9.4E-14 3.2E-18 122.2 14.7 122 196-346 34-157 (173)
85 2nyc_A Nuclear protein SNF4; b 99.5 5.3E-14 1.8E-18 119.1 12.5 119 203-345 16-140 (144)
86 2uv4_A 5'-AMP-activated protei 99.5 9.4E-14 3.2E-18 119.2 14.0 121 206-344 29-149 (152)
87 1pvm_A Conserved hypothetical 99.5 5.3E-14 1.8E-18 124.8 12.5 121 201-345 12-132 (184)
88 1o50_A CBS domain-containing p 99.5 1.2E-13 4.2E-18 119.1 14.3 134 201-346 19-153 (157)
89 3l2b_A Probable manganase-depe 99.5 8.5E-14 2.9E-18 129.3 14.2 210 104-344 7-242 (245)
90 2rc3_A CBS domain; in SITU pro 99.5 5.9E-14 2E-18 117.7 11.5 115 206-346 17-131 (135)
91 2oux_A Magnesium transporter; 99.5 6.1E-14 2.1E-18 133.5 12.7 127 189-346 128-259 (286)
92 3ctu_A CBS domain protein; str 99.5 4.3E-14 1.5E-18 121.7 10.3 123 201-346 18-142 (156)
93 1y5h_A Hypothetical protein RV 99.5 1.5E-14 5.2E-19 121.0 7.1 116 203-344 13-129 (133)
94 2emq_A Hypothetical conserved 99.5 1.2E-13 4.1E-18 118.9 13.0 125 200-346 13-139 (157)
95 2d4z_A Chloride channel protei 99.5 2E-13 7E-18 126.9 15.0 143 199-346 14-246 (250)
96 2zy9_A Mg2+ transporter MGTE; 99.5 2.3E-13 7.8E-18 138.3 15.9 166 150-346 107-277 (473)
97 4fry_A Putative signal-transdu 99.5 7E-14 2.4E-18 120.5 10.3 116 206-347 21-136 (157)
98 3pc3_A CG1753, isoform A; CBS, 99.5 6.4E-14 2.2E-18 144.6 11.7 121 288-428 384-510 (527)
99 3sl7_A CBS domain-containing p 99.5 6.7E-14 2.3E-18 123.2 10.1 138 203-346 9-156 (180)
100 2pfi_A Chloride channel protei 99.5 1.2E-13 4E-18 119.7 10.8 125 202-346 17-147 (164)
101 1yav_A Hypothetical protein BS 99.5 7.4E-14 2.5E-18 120.7 9.1 122 203-346 19-142 (159)
102 2j9l_A Chloride channel protei 99.5 2.8E-13 9.6E-18 119.8 12.5 139 203-346 16-165 (185)
103 2zy9_A Mg2+ transporter MGTE; 99.5 1.7E-13 5.8E-18 139.3 10.7 116 289-428 156-276 (473)
104 1z0n_A 5'-AMP-activated protei 99.5 5.1E-14 1.8E-18 110.9 5.3 46 2-47 49-94 (96)
105 3org_A CMCLC; transporter, tra 99.4 8.5E-14 2.9E-18 146.5 5.5 137 289-427 454-623 (632)
106 3usb_A Inosine-5'-monophosphat 99.4 6.9E-13 2.3E-17 135.7 11.9 113 292-427 117-232 (511)
107 2qlv_B Protein SIP2, protein S 99.4 4.2E-13 1.4E-17 123.8 5.3 46 2-47 46-91 (252)
108 1zfj_A Inosine monophosphate d 99.3 3.4E-12 1.2E-16 130.6 11.8 114 292-428 94-210 (491)
109 3usb_A Inosine-5'-monophosphat 99.3 2.1E-11 7.1E-16 124.7 16.8 158 203-408 118-276 (511)
110 3nme_A Ptpkis1 protein, SEX4 g 99.3 1.1E-12 3.9E-17 124.8 6.2 42 2-43 212-254 (294)
111 4fxs_A Inosine-5'-monophosphat 99.3 3.2E-13 1.1E-17 137.6 2.3 115 292-427 93-207 (496)
112 1me8_A Inosine-5'-monophosphat 99.3 2.9E-13 9.8E-18 138.6 0.2 113 294-428 103-220 (503)
113 1vrd_A Inosine-5'-monophosphat 99.3 3.1E-13 1E-17 138.4 0.4 115 291-428 98-214 (494)
114 3pc3_A CG1753, isoform A; CBS, 99.3 1.1E-11 3.8E-16 127.8 11.7 123 199-347 385-512 (527)
115 4avf_A Inosine-5'-monophosphat 99.3 4.4E-13 1.5E-17 136.5 0.3 115 291-427 91-205 (490)
116 4af0_A Inosine-5'-monophosphat 99.2 1.8E-12 6.1E-17 129.5 0.0 109 294-426 144-255 (556)
117 3org_A CMCLC; transporter, tra 99.2 1.3E-11 4.3E-16 129.9 5.9 137 200-343 455-622 (632)
118 1me8_A Inosine-5'-monophosphat 99.2 2.5E-12 8.6E-17 131.6 -0.3 156 204-406 103-260 (503)
119 1zfj_A Inosine monophosphate d 99.1 1E-09 3.5E-14 112.2 16.2 115 203-345 95-210 (491)
120 1jcn_A Inosine monophosphate d 99.1 1.1E-12 3.8E-17 134.8 -6.7 117 290-427 110-231 (514)
121 4af0_A Inosine-5'-monophosphat 99.1 2.2E-11 7.6E-16 121.7 1.8 113 204-344 144-256 (556)
122 2cu0_A Inosine-5'-monophosphat 99.1 1.7E-11 5.9E-16 125.0 0.2 108 294-427 99-206 (486)
123 4fxs_A Inosine-5'-monophosphat 99.1 6.6E-11 2.3E-15 120.6 4.5 113 202-344 93-207 (496)
124 1vrd_A Inosine-5'-monophosphat 99.0 8.6E-11 2.9E-15 120.2 3.1 114 203-346 100-215 (494)
125 4avf_A Inosine-5'-monophosphat 99.0 1.4E-10 4.7E-15 118.1 3.4 113 202-345 92-206 (490)
126 3ghd_A A cystathionine beta-sy 98.8 3.3E-09 1.1E-13 78.2 5.8 62 298-363 2-63 (70)
127 2cu0_A Inosine-5'-monophosphat 98.8 8.9E-10 3E-14 112.3 2.6 110 203-345 98-207 (486)
128 1jcn_A Inosine monophosphate d 98.7 3.5E-10 1.2E-14 116.2 -3.6 118 202-344 112-231 (514)
129 3ghd_A A cystathionine beta-sy 98.7 3.4E-08 1.2E-12 72.7 7.5 47 380-428 2-48 (70)
130 3fio_A A cystathionine beta-sy 98.5 9.4E-08 3.2E-12 69.9 5.8 62 298-363 2-63 (70)
131 3fio_A A cystathionine beta-sy 98.5 3.3E-07 1.1E-11 66.9 7.5 47 380-428 2-48 (70)
132 4aee_A Alpha amylase, catalyti 98.2 5.7E-07 1.9E-11 95.6 3.9 39 1-39 59-102 (696)
133 4aef_A Neopullulanase (alpha-a 96.9 0.00037 1.3E-08 73.3 3.5 39 2-40 57-99 (645)
134 2z0b_A GDE5, KIAA1434, putativ 92.8 0.038 1.3E-06 45.3 1.8 38 2-39 61-125 (131)
135 3c8d_A Enterochelin esterase; 81.7 1 3.5E-05 44.0 4.1 43 2-44 84-152 (403)
136 1ac0_A Glucoamylase; hydrolase 71.2 1.1 3.9E-05 34.9 0.8 15 2-16 59-74 (108)
137 1mhx_A Immunoglobulin-binding 70.4 1.6 5.6E-05 29.1 1.3 13 15-27 48-60 (65)
138 3fil_A Immunoglobulin G-bindin 69.3 1.3 4.5E-05 29.0 0.6 13 15-27 39-51 (56)
139 1igd_A Protein G; immunoglobul 67.9 2 6.8E-05 28.9 1.3 13 15-27 44-56 (61)
140 2rpv_A Immunoglobulin G-bindin 59.5 3.4 0.00012 28.7 1.3 13 15-27 58-70 (75)
141 4gln_D D-RFX001; heterochiral 53.8 4.3 0.00015 26.6 0.9 16 12-27 35-51 (56)
142 1pgx_A Protein G; immunoglobul 53.7 3.9 0.00013 29.0 0.8 13 15-27 52-64 (83)
143 2jox_A Churchill protein; zinc 51.0 6.7 0.00023 29.7 1.7 13 8-20 69-81 (106)
144 1b69_A Protein (integrase); in 44.0 10 0.00036 26.8 1.7 11 5-15 19-29 (69)
145 1ew4_A CYAY protein; friedreic 43.0 15 0.00052 28.4 2.7 18 6-25 67-84 (106)
146 1tif_A IF3-N, translation init 42.7 40 0.0014 24.4 4.8 29 319-347 13-41 (78)
147 2r9f_A Calpain-1 catalytic sub 39.2 17 0.00058 34.4 3.0 24 5-28 120-146 (339)
148 2wan_A Pullulanase; hydrolase, 36.8 13 0.00043 40.4 1.9 18 3-20 204-221 (921)
149 2khu_A Immunoglobulin G-bindin 36.7 7.3 0.00025 29.3 0.0 14 14-27 38-51 (108)
150 1svj_A Potassium-transporting 35.5 17 0.00057 30.2 2.0 35 389-425 121-155 (156)
151 2nqa_A Calpain 8; calpain, cal 35.4 17 0.00057 34.2 2.3 24 5-28 115-141 (326)
152 1zxh_A Immunoglobulin G bindin 33.1 13 0.00045 24.7 0.8 13 15-27 39-51 (56)
153 1ziv_A Calpain 9; cysteine pro 32.4 20 0.00068 33.9 2.3 24 5-28 119-145 (339)
154 1tif_A IF3-N, translation init 29.4 74 0.0025 23.0 4.3 25 401-426 13-37 (78)
155 3oeq_A Frataxin homolog, mitoc 27.4 27 0.00092 27.7 1.9 19 6-25 86-104 (123)
156 3bwu_D FIMD, outer membrane us 26.6 40 0.0014 26.5 2.9 24 4-27 28-51 (125)
157 1nh2_D Transcription initiatio 24.2 42 0.0014 26.5 2.4 20 8-28 65-84 (121)
158 1pn5_A Nacht-, LRR- and PYD-co 23.9 16 0.00056 30.3 0.0 15 14-28 38-52 (159)
159 3bow_A Calpain-2 catalytic sub 21.5 49 0.0017 34.6 3.0 25 5-29 135-162 (714)
160 3t3l_A Frataxin, mitochondrial 21.2 45 0.0016 26.6 2.1 19 6-25 80-98 (129)
161 3n08_A Putative phosphatidylet 20.0 46 0.0016 27.5 2.0 11 5-15 104-114 (153)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=3.2e-40 Score=321.08 Aligned_cols=310 Identities=25% Similarity=0.437 Sum_probs=248.1
Q ss_pred cchHHHHHHHHHHHHHhhhccccccCCCCccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHH
Q 014157 85 ISEADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILR 164 (429)
Q Consensus 85 ~~~~~~~~~~~~~~~fl~~~~~~d~~p~s~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~ 164 (429)
..+.+.....+++.+||++++|||+||.+.++++++.+.|+.+|++.|.+++++++||||++.++++|++|..|++.++.
T Consensus 11 ~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~ 90 (323)
T 3t4n_C 11 KVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQ 90 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHH
Confidence 34566677889999999999999999999999999999999999999999999999999988789999999999999887
Q ss_pred HHhcCCCCCChhhhhhhhHHHHHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCC
Q 014157 165 ELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSF 244 (429)
Q Consensus 165 ~~~~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~ 244 (429)
.++..+.. .+.++.+....|++..... ..|.++++++.+++++.+|++.|.+++++++||++.+...+ .
T Consensus 91 ~~~~~~~~--~~~l~~~~~~~v~~i~~~~--------~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~-~ 159 (323)
T 3t4n_C 91 YYFSNPDK--FELVDKLQLDGLKDIERAL--------GVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH-R 159 (323)
T ss_dssp HHHHCGGG--GGGGGGCBHHHHHHHHHHT--------TC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC-C
T ss_pred HHHcCcch--hHHHHHHHHHHHHHHHHHh--------CCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC-c
Confidence 66543322 2455555556666544322 25788999999999999999999999999999997432222 1
Q ss_pred CeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEE
Q 014157 245 PQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPI 324 (429)
Q Consensus 245 ~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV 324 (429)
++++|++|.+|+++++..+... ......+++++.++ |.++++++.+++++.+|++.|.+++++++||
T Consensus 160 ~~l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pV 226 (323)
T 3t4n_C 160 EIVVSVLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPI 226 (323)
T ss_dssp EEEEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTCSEEEE
T ss_pred cceEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCCCEEEE
Confidence 1399999999999998766433 12333444444221 5568899999999999999999999999999
Q ss_pred ECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEE
Q 014157 325 VDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRL 404 (429)
Q Consensus 325 vd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l 404 (429)
+|++|+++|++|.+|+++....+.+.. ...++.++|..... ...++++|.+++++.+|+++|.+++++++
T Consensus 227 vd~~~~~~Giit~~dl~~~~~~~~~~~---~~~~v~~~m~~~~~-------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l 296 (323)
T 3t4n_C 227 IDENGYLINVYEAYDVLGLIKGGIYND---LSLSVGEALMRRSD-------DFEGVYTCTKNDKLSTIMDNIRKARVHRF 296 (323)
T ss_dssp ECTTCBEEEEEETTHHHHHHHTTHHHH---TTSBHHHHGGGSCT-------TCCCCEEECTTCBHHHHHHHHHHSCCCEE
T ss_pred ECCCCeEEEEEeHHHHHHHHhhchhhh---ccCCHHHHHhhccc-------cCCCCEEECCCCCHHHHHHHHHHhCCCEE
Confidence 999999999999999998776543322 25689998854110 01268999999999999999999999999
Q ss_pred EEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 405 VIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 405 ~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
|||| ++|+++|+||.+||++++++
T Consensus 297 ~Vvd-~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 297 FVVD-DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp EEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred EEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 9999 58999999999999999863
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=1.2e-34 Score=283.09 Aligned_cols=305 Identities=22% Similarity=0.429 Sum_probs=239.5
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHHHHh
Q 014157 88 ADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELG 167 (429)
Q Consensus 88 ~~~~~~~~~~~~fl~~~~~~d~~p~s~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~ 167 (429)
.+.+...+.+.+||+..+++|+|+.+.++++++++.|+.+|++.|.+++++++||||.+.++++|++|..|++.++...+
T Consensus 6 ~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 6 ETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHh
Confidence 45566788899999999999999999999999999999999999999999999999987789999999999998776543
Q ss_pred cCCCCC-ChhhhhhhhHHHHHHhhhhhhcccCCCCccCCCCc--eecCCCCcHHHHHHHHHhcCCceeeEEecCCCCC-C
Q 014157 168 NHGSNL-TEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPL--VYAGPNDNLKDVARKILHNEVATVPIIHSSSQDG-S 243 (429)
Q Consensus 168 ~~~~~l-~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~--i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~-~ 243 (429)
...... ..+.+...+++.+++.... +|.+++ +++.+++++.+|++.|.+++++++||++. ..+ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~l~~----------im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~~ 153 (334)
T 2qrd_G 86 QSSSFPEAIAEIDKFRLLGLREVERK----------IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV--DGETG 153 (334)
T ss_dssp HHCSCGGGGGGGGSCBHHHHHHHHHH----------HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE--ETTTT
T ss_pred hccCCccHHHHHhhhchhhHHHHHHh----------hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC--CCCcC
Confidence 211010 1123445566666654432 255566 99999999999999999999999999973 222 0
Q ss_pred CCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEE
Q 014157 244 FPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIP 323 (429)
Q Consensus 244 ~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lp 323 (429)
.+.++|++|.+|+++++...... ......+++++ ..+|.+++.++.+++++.+|++.|.+++++++|
T Consensus 154 ~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~ 220 (334)
T 2qrd_G 154 SEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQM---------TIGTWSNLATASMETKVYDVIKMLAEKNISAVP 220 (334)
T ss_dssp EEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEE
T ss_pred ccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHh---------CCcccCCceEECCCCcHHHHHHHHHHcCCcEEE
Confidence 11399999999999988754321 01122333332 113667889999999999999999999999999
Q ss_pred EECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCE
Q 014157 324 IVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRR 403 (429)
Q Consensus 324 Vvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~ 403 (429)
|+|++|+++|++|.+|+++....+.+. ....++.++|.... .+ ..++.+|.+++++.+|++.|.++++++
T Consensus 221 Vvd~~~~~~Giit~~dl~~~~~~~~~~---~~~~~v~~~m~~~~-----~~--~~~~~~v~~~~~l~~~~~~m~~~~~~~ 290 (334)
T 2qrd_G 221 IVNSEGTLLNVYESVDVMHLIQDGDYS---NLDLSVGEALLKRP-----AN--FDGVHTCRATDRLDGIFDAIKHSRVHR 290 (334)
T ss_dssp EECTTCBEEEEEETHHHHHHHTTSCGG---GGGSBHHHHHTTCC-----TT--CCCCCEECTTCBHHHHHHHHHHSCCCE
T ss_pred EEcCCCcEEEEEEHHHHHHHhhccccc---cccCcHHHHHhccc-----cc--CCCCEEECCCCcHHHHHHHHHHcCCCE
Confidence 999889999999999999876554321 22568898884210 00 037889999999999999999999999
Q ss_pred EEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 404 LVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 404 l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
+|||| ++|+++|+||.+||++++.
T Consensus 291 l~Vvd-~~g~l~Giit~~dil~~~~ 314 (334)
T 2qrd_G 291 LFVVD-ENLKLEGILSLADILNYII 314 (334)
T ss_dssp EEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred EEEEC-CCCeEEEEEeHHHHHHHHH
Confidence 99999 5899999999999999875
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=8.3e-35 Score=283.82 Aligned_cols=300 Identities=33% Similarity=0.569 Sum_probs=240.4
Q ss_pred HHHHHHHHHhhhccccccCCCCccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHHHHhcCCC
Q 014157 92 VSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGS 171 (429)
Q Consensus 92 ~~~~~~~~fl~~~~~~d~~p~s~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~ 171 (429)
..++.+..||+..+++|+|+.+.++++++.+.|+.+|++.|.+++++++||+|.+.++++|++|..|++.++......+.
T Consensus 23 ~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~ 102 (330)
T 2v8q_E 23 SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSAL 102 (330)
T ss_dssp CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccc
Confidence 45677999999999999999999999999999999999999999999999999877899999999999987754331111
Q ss_pred CCChhhhhhhhHHHHHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEE
Q 014157 172 NLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIA 251 (429)
Q Consensus 172 ~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgil 251 (429)
.....+....++.|.... +++|.++++++.+++++.+|++.|.+++++++||+| .+.| +++|++
T Consensus 103 -~~~~~l~~~~~~~~~~~~----------~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~---~~~Giv 166 (330)
T 2v8q_E 103 -VQIYELEEHKIETWREVY----------LQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID--PESG---NTLYIL 166 (330)
T ss_dssp -TTCCCGGGCBHHHHHHHH----------SSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC--TTTC---CEEEEE
T ss_pred -cchhHHhhccHHHHHHHH----------hhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe--CCCC---cEEEEE
Confidence 111334445566665432 346889999999999999999999999999999995 2156 799999
Q ss_pred ehhhHHHHHHhhcccCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcE
Q 014157 252 SLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSL 331 (429)
Q Consensus 252 t~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~l 331 (429)
|.+|+++++........ ...++..+++++.+.+ .+++.++.+++++.++++.|.+++++++||+|++|++
T Consensus 167 t~~dl~~~~~~~~~~~~-~~~~~~~~v~~~~v~~---------~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l 236 (330)
T 2v8q_E 167 THKRILKFLKLFITEFP-KPEFMSKSLEELQIGT---------YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRV 236 (330)
T ss_dssp CHHHHHHHHHHHSCSSS-CCGGGGSBHHHHTCSB---------CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBE
T ss_pred cHHHHHHHHHHHhhccC-chhhhcCCHHHhcccC---------cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcE
Confidence 99999998876543211 1112334444443221 1478899999999999999999999999999989999
Q ss_pred EEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCC
Q 014157 332 LDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGS 411 (429)
Q Consensus 332 vGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~ 411 (429)
+|++|.+|+++......+.. .+.++.++|..+. .|.+++++|.+++++.+|+++|.+++++++||+| ++
T Consensus 237 ~Giit~~dl~~~~~~~~~~~---~~~~v~~~~~~~~-------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~ 305 (330)
T 2v8q_E 237 VDIYSKFDVINLAAEKTYNN---LDVSVTKALQHRS-------HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD-EH 305 (330)
T ss_dssp EEEEEGGGTGGGGGSSCCCC---CSSBHHHHGGGCC-------SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC-TT
T ss_pred EEEEEHHHHHHHHhcccccc---ccCcHHHHHhccc-------cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc-CC
Confidence 99999999998665433221 2468899885321 2456899999999999999999999999999999 48
Q ss_pred CeEEEEEeHHHHHHHhh
Q 014157 412 KRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 412 g~l~GiIs~~Dil~~l~ 428 (429)
|+++|+||..||++++.
T Consensus 306 g~l~Giit~~Dil~~~~ 322 (330)
T 2v8q_E 306 DVVKGIVSLSDILQALV 322 (330)
T ss_dssp SBEEEEEEHHHHHHHHH
T ss_pred CcEEEEEeHHHHHHHHH
Confidence 99999999999999875
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=2.5e-32 Score=259.28 Aligned_cols=268 Identities=14% Similarity=0.292 Sum_probs=207.8
Q ss_pred ccccCCCCccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHHHHhcCCCCCChhhhhhhhHHH
Q 014157 106 AYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISA 185 (429)
Q Consensus 106 ~~d~~p~s~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l~~~~i~~ 185 (429)
+.+.+..+ ++++++++.|+.+|++.|.+++++++||+|++.++++|++|..|++.++..... ...++......
T Consensus 5 v~~~i~~~-~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~------~~~~~~~~~~~ 77 (280)
T 3kh5_A 5 VMKIAQNK-KIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK------YNLIREKHERN 77 (280)
T ss_dssp GGGTSCCS-CCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG------GHHHHTTSTTC
T ss_pred HHHHhcCC-CcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch------hhhhhhccccc
Confidence 34445443 899999999999999999999999999999767899999999999976621110 00011100000
Q ss_pred HHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcc
Q 014157 186 WKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFR 265 (429)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~ 265 (429)
... .....++++|.++++++.+++++.+|++.|.+++++++||+| +++ +++|++|.+|+++++.....
T Consensus 78 ~~~------~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~ 145 (280)
T 3kh5_A 78 FLA------AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVN---DEN---QLISLITERDVIRALLDKID 145 (280)
T ss_dssp HHH------HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEEC---TTC---BEEEEEEHHHHHHHHGGGSC
T ss_pred hhH------HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEc---CCC---EEEEEEEHHHHHHHHhhcCC
Confidence 000 001234567889999999999999999999999999999996 446 79999999999988764321
Q ss_pred cCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 266 HCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 266 ~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
. ..+ ++++|.+++.++.+++++.++++.|.+++++++||+ ++|+++|++|.+|+++...
T Consensus 146 ~--------~~~------------v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 146 E--------NEV------------IDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp T--------TCB------------SGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHT
T ss_pred C--------CCC------------HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHh
Confidence 1 112 334477789999999999999999999999999999 6899999999999998764
Q ss_pred ccccc-c------cccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEE
Q 014157 346 DKAYA-H------INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIV 418 (429)
Q Consensus 346 ~~~~~-~------l~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiI 418 (429)
.+... . ....+.++.++| .+++++|++++++.+|++.|.+++++++||+| ++|+++|+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~m-------------~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Giv 270 (280)
T 3kh5_A 205 SDWAFNHMQTGNVREITNVRMEEIM-------------KRDVITAKEGDKLKKIAEIMVTNDIGALPVVD-ENLRIKGII 270 (280)
T ss_dssp SHHHHHHHHSCCTHHHHHCBHHHHS-------------BSSCCCBCTTCBHHHHHHHHHHHTCCEEEEEC-TTCBEEEEE
T ss_pred hhhhhhhhcccchhhhhCCcHHHHh-------------cCCCEEECCCCCHHHHHHHHHHCCCCEEEEEC-CCCeEEEEE
Confidence 32110 0 001234566655 56899999999999999999999999999999 588999999
Q ss_pred eHHHHHHHh
Q 014157 419 SLSDIFKFL 427 (429)
Q Consensus 419 s~~Dil~~l 427 (429)
|++||++++
T Consensus 271 t~~dil~~l 279 (280)
T 3kh5_A 271 TEKDVLKYF 279 (280)
T ss_dssp EHHHHGGGG
T ss_pred eHHHHHHhh
Confidence 999999986
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=2e-31 Score=255.84 Aligned_cols=262 Identities=11% Similarity=0.150 Sum_probs=207.7
Q ss_pred ccccccCCCCccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHHHHhcCCCCCChhhhhhhhH
Q 014157 104 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTI 183 (429)
Q Consensus 104 ~~~~d~~p~s~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l~~~~i 183 (429)
.++-|+|.. ++++++++.|+.+|++.|.+++++++||+| ++++|++|..|++..+..... . ....
T Consensus 20 ~~V~dim~~--~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~--~--------~~~~ 84 (296)
T 3ddj_A 20 MNIETLMIK--NPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCK--D--------SCSQ 84 (296)
T ss_dssp SSGGGTCEE--SCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC-------------CCH
T ss_pred cCHHHhccC--CCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhccccc--c--------cccc
Confidence 456677744 899999999999999999999999999998 789999999999876621110 0 0001
Q ss_pred HHHHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhh
Q 014157 184 SAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRY 263 (429)
Q Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~ 263 (429)
..+... ....++++|.++++++.+++++.+|++.|.+++++++||+| +++ +++|++|.+|+++++...
T Consensus 85 ~~~~~~------~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd---~~~---~lvGivt~~dl~~~~~~~ 152 (296)
T 3ddj_A 85 GDLYHI------STTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVD---IND---KPVGIVTEREFLLLYKDL 152 (296)
T ss_dssp HHHHHH------HTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHGGGGGGS
T ss_pred hhhHHH------hcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHhhhcc
Confidence 111110 12234567888999999999999999999999999999996 445 799999999998755322
Q ss_pred cccCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHH
Q 014157 264 FRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITAL 343 (429)
Q Consensus 264 ~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~ 343 (429)
. ...++ +++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++.
T Consensus 153 ~---------~~~~v------------~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~ 211 (296)
T 3ddj_A 153 D---------EIFPV------------KVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQ 211 (296)
T ss_dssp C---------CCCBH------------HHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred c---------ccccH------------HHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 1 11233 33377789999999999999999999999999999999999999999999986
Q ss_pred Hhccccccc---ccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeH
Q 014157 344 AKDKAYAHI---NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSL 420 (429)
Q Consensus 344 ~~~~~~~~l---~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~ 420 (429)
.... +..+ .....++.++| .+++++|.+++++.+|++.|.+++++++||+| ++|+++|+||+
T Consensus 212 ~~~~-~~~~~~~~~~~~~v~~~m-------------~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Giit~ 276 (296)
T 3ddj_A 212 LAKA-VDKLDPDYFYGKVVKDVM-------------VTNLVTIDELASVNRAAAEMIVKRIGSLLILN-KDNTIRGIITE 276 (296)
T ss_dssp HHHH-HHHTCTHHHHTCBHHHHS-------------BCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEH
T ss_pred HHHH-HhhcChhhhcCcCHHHHh-------------CCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEcH
Confidence 6521 1110 01245677765 56889999999999999999999999999999 58999999999
Q ss_pred HHHHHHhh
Q 014157 421 SDIFKFLL 428 (429)
Q Consensus 421 ~Dil~~l~ 428 (429)
+||++++.
T Consensus 277 ~Dil~~l~ 284 (296)
T 3ddj_A 277 RDLLIALH 284 (296)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.96 E-value=3.9e-29 Score=237.77 Aligned_cols=256 Identities=18% Similarity=0.290 Sum_probs=177.8
Q ss_pred ccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHHHHhcCCCCCChhhhhhhhHHHHHHhhhhh
Q 014157 114 GKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYL 193 (429)
Q Consensus 114 ~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l~~~~i~~~~~~~~~~ 193 (429)
.++++++++.|+.+|++.|.++++..+||+|. .++++|++|..|++..+. ..
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~---------------~~------------ 60 (282)
T 2yzq_A 9 QNPVTITLPATRNYALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPD---------------EE------------ 60 (282)
T ss_dssp ESCCCEESSCC------------CCEEEEECT-TCCEEEEEESSCC----------------------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhc---------------cC------------
Confidence 46788999999999999999999999999996 478999999999874331 00
Q ss_pred hcccCCCCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHH-HHHhhcccCCCCCc
Q 014157 194 NRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRYFRHCSSSLP 272 (429)
Q Consensus 194 ~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~-~l~~~~~~~~~~~~ 272 (429)
.++++|.++++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..|+++ ++... . .
T Consensus 61 -----~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---~~~---~~~Giit~~di~~~~~~~~--~-----~ 122 (282)
T 2yzq_A 61 -----QLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVD---SKG---KPVGILTVGDIIRRYFAKS--E-----K 122 (282)
T ss_dssp --------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHTTTTC--S-----G
T ss_pred -----CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---EEEEEEEHHHHHHHHHhcc--C-----C
Confidence 01235677789999999999999999999999999996 345 7999999999987 55421 0 0
Q ss_pred ccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHH------HHHhc
Q 014157 273 ILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT------ALAKD 346 (429)
Q Consensus 273 ~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~------~~~~~ 346 (429)
.... .++++|.++++++.+++++.++++.|.+++++++||+|++|+++|++|.+|++ +....
T Consensus 123 ~~~~------------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~ 190 (282)
T 2yzq_A 123 YKGV------------EIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKS 190 (282)
T ss_dssp GGGC------------BSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC----
T ss_pred cccC------------cHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhcc
Confidence 0111 23455777899999999999999999999999999999889999999999998 32210
Q ss_pred cc--ccc-cccc-cccHHHHHh---cCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEe
Q 014157 347 KA--YAH-INLS-EMTIHQALQ---LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVS 419 (429)
Q Consensus 347 ~~--~~~-l~l~-~~~v~~~l~---~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs 419 (429)
.. ... ..+. ......... .........++|.+++++|.+++++.+|+++|.+++++++||+| ++|+++|+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~lvGiit 269 (282)
T 2yzq_A 191 TELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR-GEGDLIGLIR 269 (282)
T ss_dssp ----------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTTEEEEEEE
T ss_pred chhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC-CCCCEEEEEe
Confidence 00 000 0000 000000000 00011223346788999999999999999999999999999999 4789999999
Q ss_pred HHHHHHHhh
Q 014157 420 LSDIFKFLL 428 (429)
Q Consensus 420 ~~Dil~~l~ 428 (429)
++||++++.
T Consensus 270 ~~Dil~~~~ 278 (282)
T 2yzq_A 270 DFDLLKVLV 278 (282)
T ss_dssp HHHHGGGGC
T ss_pred HHHHHHHHH
Confidence 999999875
No 7
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.90 E-value=6.2e-23 Score=194.41 Aligned_cols=195 Identities=18% Similarity=0.319 Sum_probs=155.9
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCc-cccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP-ICAI 281 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~-v~~l 281 (429)
+|+++++++++++|+.+|+++|.+++++++||++ .+++ +++|++|.+||++++...... .++... ...+
T Consensus 9 i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d--~~~~---~~~Givt~~di~~~~~~~~~~-----~~~~~~~~~~~ 78 (280)
T 3kh5_A 9 AQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVN--AGNN---KVVGIITSMDIVDFMGGGSKY-----NLIREKHERNF 78 (280)
T ss_dssp SCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEEC--TTTC---BEEEEEEHHHHHHHTTTSGGG-----HHHHTTSTTCH
T ss_pred hcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEE--CCCC---eEEEEEEHHHHHHHhcccchh-----hhhhhccccch
Confidence 5788999999999999999999999999999995 2356 899999999999876432110 000000 0000
Q ss_pred cCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 014157 282 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQ 361 (429)
Q Consensus 282 ~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~ 361 (429)
......+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....... ...++.+
T Consensus 79 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~ 152 (280)
T 3kh5_A 79 -LAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID-----ENEVIDD 152 (280)
T ss_dssp -HHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSC-----TTCBSGG
T ss_pred -hHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCC-----CCCCHHH
Confidence 0111234667788899999999999999999999999999999999999999999999987654322 1235555
Q ss_pred HHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 362 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 362 ~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
+| .+++.++++++++.++++.|.+++++++||++ +|+++|+||.+|+++++.
T Consensus 153 ~m-------------~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 YI-------------TRDVIVATPGERLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp GC-------------BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHT
T ss_pred Hh-------------CCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHh
Confidence 44 56889999999999999999999999999996 799999999999998863
No 8
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.88 E-value=9.2e-23 Score=195.32 Aligned_cols=192 Identities=18% Similarity=0.225 Sum_probs=156.8
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++++|.++++++++++++.+|++.|.+++++++||++ + +++|++|..||++++...... ....+
T Consensus 22 V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-----~---~l~GivT~~Di~~~~~~~~~~--------~~~~~ 85 (296)
T 3ddj_A 22 IETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-----E---KIEGLLTTRDLLSTVESYCKD--------SCSQG 85 (296)
T ss_dssp GGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-----S---SEEEEEEHHHHHGGGTTCC-----------CCHH
T ss_pred HHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-----C---eEEEEEeHHHHHHHhcccccc--------cccch
Confidence 4557889999999999999999999999999999993 5 799999999999876432110 00011
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccH
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTI 359 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v 359 (429)
.+. .....+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++..... ....++
T Consensus 86 ~~~-~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~------~~~~~v 158 (296)
T 3ddj_A 86 DLY-HISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDL------DEIFPV 158 (296)
T ss_dssp HHH-HHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGS------CCCCBH
T ss_pred hhH-HHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcc------cccccH
Confidence 000 0012245666888899999999999999999999999999999999999999999998765432 124578
Q ss_pred HHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 360 HQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 360 ~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.++| .+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++.
T Consensus 159 ~~~m-------------~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 159 KVFM-------------STKVQTIYKEVRLDQAVKLMLRRGFRRLPVID-DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HHHS-------------BCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred HHhh-------------cCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 8876 45788999999999999999999999999999 5899999999999998763
No 9
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.87 E-value=2.1e-21 Score=188.78 Aligned_cols=207 Identities=16% Similarity=0.251 Sum_probs=161.4
Q ss_pred CccC--CCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcc
Q 014157 201 GKAF--PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 278 (429)
Q Consensus 201 g~~~--~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v 278 (429)
+++| .++++++++++++.+|++.|.+++++++||++. +.+ +++|++|.+|++..+...+..... ....+
T Consensus 38 ~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~--~~~---~~vGivt~~Dll~~l~~~~~~~~~----~~~~l 108 (330)
T 2v8q_E 38 YDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDS--KKQ---SFVGMLTITDFINILHRYYKSALV----QIYEL 108 (330)
T ss_dssp GGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEET--TTT---EEEEEEEHHHHHHHHHHHHHHHTT----TCCCG
T ss_pred hhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHhcccc----chhHH
Confidence 4568 788999999999999999999999999999972 335 799999999999887654321000 01112
Q ss_pred ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC-CCcEEEEEeHHHHHHHHhccccc--ccccc
Q 014157 279 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD-NDSLLDIYCRSDITALAKDKAYA--HINLS 355 (429)
Q Consensus 279 ~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~-~g~lvGivt~~Di~~~~~~~~~~--~l~l~ 355 (429)
....+..|...++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|.+|+++........ .-.+.
T Consensus 109 ~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 188 (330)
T 2v8q_E 109 EEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFM 188 (330)
T ss_dssp GGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGG
T ss_pred hhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhh
Confidence 2333444545567788889999999999999999999999999999998 89999999999999866432110 00112
Q ss_pred cccHHHHHhcCCCCCCcccccC-CCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 356 EMTIHQALQLGQDSYSPYELRS-QRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 356 ~~~v~~~l~~~~~~~~~~~~~~-~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
..++.++. +|. .++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++.
T Consensus 189 ~~~v~~~~-----------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 189 SKSLEELQ-----------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD-EKGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp GSBHHHHT-----------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEEC-TTSBEEEEEEGGGTGGGGG
T ss_pred cCCHHHhc-----------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEEC-CCCcEEEEEEHHHHHHHHh
Confidence 34555542 223 5788999999999999999999999999999 4899999999999998764
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.84 E-value=1.1e-20 Score=182.99 Aligned_cols=202 Identities=12% Similarity=0.230 Sum_probs=151.2
Q ss_pred CCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCc
Q 014157 205 PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVG 284 (429)
Q Consensus 205 ~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~ 284 (429)
+.++++++.++|+.+|++.|.+++++++||++ .+.+ +++|++|.+|++.++...+..... .. .+......
T Consensus 39 ~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d--~~~~---~lvGilt~~Dl~~~l~~~~~~~~~-~~----~l~~~~~~ 108 (323)
T 3t4n_C 39 SYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWD--SKTS---RFAGLLTTTDFINVIQYYFSNPDK-FE----LVDKLQLD 108 (323)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHTTCSCEEEEE--TTTT---EEEEEECHHHHHHHHHHHHHCGGG-GG----GGGGCBHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHcCCceEEEEe--CCCC---eEEEEEEHHHHHHHHHHHHcCcch-hH----HHHHHHHH
Confidence 35688999999999999999999999999996 2445 799999999999987654322110 00 11111100
Q ss_pred ccc--cccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCc-----EEEEEeHHHHHHHHhcccccccccccc
Q 014157 285 TWV--PKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDS-----LLDIYCRSDITALAKDKAYAHINLSEM 357 (429)
Q Consensus 285 ~~~--~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~-----lvGivt~~Di~~~~~~~~~~~l~l~~~ 357 (429)
.+. .++.+.|.++++++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|+++........ ..+...
T Consensus 109 ~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~ 187 (323)
T 3t4n_C 109 GLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKI 187 (323)
T ss_dssp HHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCS
T ss_pred HHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhC
Confidence 110 1233456778999999999999999999999999999998775 99999999999866432111 122345
Q ss_pred cHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 358 TIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 358 ~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
++.+++. .|.++++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 188 ~v~~~~~----------~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd-~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 188 PIGDLNI----------ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID-ENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp BGGGTTC----------SBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETTHHHHHHH
T ss_pred cHHHcCC----------CCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEeHHHHHHHHh
Confidence 6666520 1456899999999999999999999999999999 5899999999999998764
No 11
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.83 E-value=6.2e-21 Score=181.01 Aligned_cols=173 Identities=16% Similarity=0.227 Sum_probs=130.0
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 282 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 282 (429)
+|.++++++++++++.+|+++|.+++++++||++ +++ +++|+++..|+++.+. ..
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d---~~~---~~~Giv~~~dl~~~~~-------------~~------ 60 (282)
T 2yzq_A 6 IMTQNPVTITLPATRNYALELFKKYKVRSFPVVN---KEG---KLVGIISVKRILVNPD-------------EE------ 60 (282)
T ss_dssp HSEESCCCEESSCC------------CCEEEEEC---TTC---CEEEEEESSCC--------------------------
T ss_pred hccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEc---CCC---cEEEEEEHHHHHhhhc-------------cC------
Confidence 5778899999999999999999999999999996 356 7999999999985321 11
Q ss_pred CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccccccccHHH
Q 014157 283 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQ 361 (429)
Q Consensus 283 i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~-~~~~~~~~~l~l~~~~v~~ 361 (429)
.++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|.+|+++ ....+.. ....++.+
T Consensus 61 ------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~----~~~~~v~~ 130 (282)
T 2yzq_A 61 ------QLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK----YKGVEIEP 130 (282)
T ss_dssp ---------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSG----GGGCBSTT
T ss_pred ------CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCC----cccCcHHH
Confidence 233447777899999999999999999999999999998899999999999997 5543210 11334444
Q ss_pred HHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHH
Q 014157 362 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 424 (429)
Q Consensus 362 ~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil 424 (429)
+ |..+++++.+++++.++++.|.+++++++||+| ++|+++|+||..|++
T Consensus 131 ~-------------m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 Y-------------YQRYVSIVWEGTPLKAALKALLLSNSMALPVVD-SEGNLVGIVDETDLL 179 (282)
T ss_dssp T-------------SBSCCCCEETTSBHHHHHHHHHTCSSSEEEEEC-TTSCEEEEEEGGGGG
T ss_pred H-------------hCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHh
Confidence 4 466888999999999999999999999999999 489999999999998
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.82 E-value=4.5e-20 Score=179.63 Aligned_cols=209 Identities=12% Similarity=0.165 Sum_probs=152.2
Q ss_pred CccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcc
Q 014157 201 GKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 278 (429)
Q Consensus 201 g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v 278 (429)
+++|.+ +++++++++|+.+|++.|.+++++++||++. +.+ +++|+++.+|++.++...+..... ...+ ..+
T Consensus 25 ~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~--~~~---~~vGiv~~~Dl~~~~~~~~~~~~~-~~~~-~~~ 97 (334)
T 2qrd_G 25 YDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDS--EAN---KFAGLLTMADFVNVIKYYYQSSSF-PEAI-AEI 97 (334)
T ss_dssp GGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHHCSC-GGGG-GGG
T ss_pred hhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHhhccCC-ccHH-HHH
Confidence 445643 5889999999999999999999999999962 335 899999999999887543221000 0000 001
Q ss_pred ccccCcccccccCCCCCCCc--eeecCCCCHHHHHHHHHhcCCCEEEEECCCC-c----EEEEEeHHHHHHHHhcccccc
Q 014157 279 CAIPVGTWVPKIGEPNRRPL--AMLRPSASLSAALNLLVQAQVSSIPIVDDND-S----LLDIYCRSDITALAKDKAYAH 351 (429)
Q Consensus 279 ~~l~i~~~~~~v~~~~~~~~--~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g-~----lvGivt~~Di~~~~~~~~~~~ 351 (429)
....+..+....+++|.+++ +++.+++++.++++.|.+++++++||+|++| + ++|++|.+|+++....... .
T Consensus 98 ~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~-~ 176 (334)
T 2qrd_G 98 DKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK-E 176 (334)
T ss_dssp GSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG-G
T ss_pred hhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc-c
Confidence 11111111111122344556 8999999999999999999999999998765 4 9999999999976643211 1
Q ss_pred cccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 352 INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 352 l~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
..+...++.+++ .+|.+++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 177 ~~~~~~~v~~l~----------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd-~~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 177 TAMLRVPLNQMT----------IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVN-SEGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp GGGCCCBGGGSS----------CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETHHHHHHHT
T ss_pred hhhhhCcHHHhC----------CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEc-CCCcEEEEEEHHHHHHHhh
Confidence 112234555531 02466889999999999999999999999999999 4899999999999998764
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.80 E-value=5.8e-20 Score=161.47 Aligned_cols=125 Identities=22% Similarity=0.340 Sum_probs=102.7
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccc------c-----------
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAH------I----------- 352 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~------l----------- 352 (429)
++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++......... .
T Consensus 20 V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (170)
T 4esy_A 20 IRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHLF 99 (170)
T ss_dssp GGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHHH
T ss_pred HHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhhh
Confidence 44558889999999999999999999999999999999999999999999975432211000 0
Q ss_pred -ccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 353 -NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 353 -~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
.....++.+ +|++++++|++++++.+|+++|.+++++++||+| +|+++|+||++||+++|+.
T Consensus 100 ~~~~~~~v~~-------------im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 100 ETGRKLTASA-------------VMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ--DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHTTCBHHH-------------HCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHTTTSCC
T ss_pred ccccccchhh-------------hcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE--CCEEEEEEEHHHHHHHHHh
Confidence 001223343 5578999999999999999999999999999999 5999999999999998863
No 14
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.76 E-value=3.3e-18 Score=143.25 Aligned_cols=119 Identities=16% Similarity=0.307 Sum_probs=104.1
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|. ..++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+. ...++.++|
T Consensus 8 v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------~~~~v~~~m--- 78 (130)
T 3i8n_A 8 VTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------GQKQLGAVM--- 78 (130)
T ss_dssp CTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT------TTSBHHHHS---
T ss_pred HhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC------CcCCHHHHh---
Confidence 556677 356789999999999999999999999999987 89999999999998765431 246788876
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||+.||+++++|
T Consensus 79 -----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 79 -----------RPIQVVLNNTALPKVFDQMMTHRLQLALVVD-EYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp -----------EECCEEETTSCHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred -----------cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc-CCCCEEEEEEHHHHHHHHcC
Confidence 2578999999999999999999999999999 58999999999999999876
No 15
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.76 E-value=1.5e-18 Score=144.78 Aligned_cols=119 Identities=13% Similarity=0.385 Sum_probs=101.7
Q ss_pred cCCCCCCC--ceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNRRP--LAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~~~--~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|.+. ++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++..... ....++.++|
T Consensus 5 v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~------~~~~~v~~~m--- 75 (127)
T 3nqr_A 5 VRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSD------AEAFSMDKVL--- 75 (127)
T ss_dssp HHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTT------CCCCCHHHHC---
T ss_pred HHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcc------CCCCCHHHHc---
Confidence 34457644 8899999999999999999999999999987 8999999999998765432 1246788876
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
. ++.++++++++.+|++.|.+++++++||+| ++|+++|+||+.||+++++|
T Consensus 76 ----------~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 76 ----------R-TAVVVPESKRVDRMLKEFRSQRYHMAIVID-EFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ----------B-CCCEEETTCBHHHHHHHHHHTTCCEEEEEC-TTSCEEEEEEHHHHHHHC--
T ss_pred ----------C-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 2 467899999999999999999999999999 58999999999999999875
No 16
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.76 E-value=1.5e-18 Score=150.37 Aligned_cols=117 Identities=21% Similarity=0.318 Sum_probs=97.4
Q ss_pred CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCcccc
Q 014157 296 RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYEL 375 (429)
Q Consensus 296 ~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~~~~~ 375 (429)
.+++++.+++|+.+|+++|.+++++++||+|++|+++|++|.+|+++...........+...++.++
T Consensus 25 ~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~i------------- 91 (156)
T 3k6e_A 25 KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHM------------- 91 (156)
T ss_dssp TSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGT-------------
T ss_pred hHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHh-------------
Confidence 4689999999999999999999999999999999999999999999866543322212234455554
Q ss_pred cCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 376 RSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 376 ~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
|.+++.++++++++.+|++.|.++++ +|||| ++|+++|+||++||++++.
T Consensus 92 m~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd-~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 92 TKTDVAVVSPDFTITEVLHKLVDESF--LPVVD-AEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp CBCSCCCBCTTCCHHHHHHHTTTSSE--EEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred hcCCceecccccHHHHHHHHHHHcCC--eEEEe-cCCEEEEEEEHHHHHHHHH
Confidence 46789999999999999999998764 99999 5999999999999999873
No 17
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.75 E-value=5.6e-18 Score=145.06 Aligned_cols=119 Identities=20% Similarity=0.320 Sum_probs=103.9
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 014157 289 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 365 (429)
Q Consensus 289 ~v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~ 365 (429)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++...... ..++.++|
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~~m-- 94 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELEEIL-- 94 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGGGTC--
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHHHhc--
Confidence 35556877 89999999999999999999999999999987 89999999999998654421 24566644
Q ss_pred CCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 366 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
+++.++++++++.+|++.|.+++++++||+| ++|+++|+||+.||+++++|
T Consensus 95 ------------~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 95 ------------RDIIYISENLTIDKALERIRKEKLQLAIVVD-EYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp ------------BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC-TTSSEEEEEEHHHHHHHHHH
T ss_pred ------------CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 4789999999999999999999999999999 58999999999999999864
No 18
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.75 E-value=5.7e-18 Score=141.94 Aligned_cols=121 Identities=12% Similarity=0.199 Sum_probs=103.1
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECC-CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDD-NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~-~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|. .+++++.+++++.+|++.|.+++++++||+++ +|+++|++|.+|+++....+.. +...++.++|
T Consensus 4 v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~----~~~~~v~~~m--- 76 (130)
T 3hf7_A 4 VNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE----FTKEIMLRAA--- 76 (130)
T ss_dssp HHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC----CCHHHHHHHS---
T ss_pred HHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc----cchhhHHHhc---
Confidence 344564 36889999999999999999999999999975 6899999999999987655321 2235677765
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
+++.++++++++.+|++.|.+++++++||+| ++|+++|+||+.||+++++|
T Consensus 77 -----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 77 -----------DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD-EYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp -----------BCCCEEETTCBHHHHHHHHHHHCCCEEEEEC-TTSCEEEEEEHHHHHHHHHC
T ss_pred -----------cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc-CCCCEEEEeeHHHHHHHHhC
Confidence 3678999999999999999999999999999 58999999999999999875
No 19
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.74 E-value=5.7e-18 Score=139.75 Aligned_cols=118 Identities=20% Similarity=0.375 Sum_probs=103.9
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 369 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~ 369 (429)
++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+++.+|+++....+ ..++.++|
T Consensus 3 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~--------~~~v~~~~------ 68 (122)
T 3kpb_A 3 VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN--------KKTIEEIM------ 68 (122)
T ss_dssp HHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT--------CCBGGGTS------
T ss_pred hHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc--------ccCHHHHh------
Confidence 4456888899999999999999999999999999999999999999999999876542 13566654
Q ss_pred CCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 370 YSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
.+++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||..||++++.+
T Consensus 69 -------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 69 -------TRNVITAHEDEPVDHVAIKMSKYNISGVPVVD-DYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp -------BSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHC-
T ss_pred -------cCCCeEECCCCCHHHHHHHHHHhCCCeEEEEC-CCCCEEEEEeHHHHHHHhhc
Confidence 56788999999999999999999999999999 48999999999999998853
No 20
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.74 E-value=2e-17 Score=145.51 Aligned_cols=119 Identities=18% Similarity=0.344 Sum_probs=104.3
Q ss_pred ccCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 014157 289 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 365 (429)
Q Consensus 289 ~v~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~ 365 (429)
+++++|. ++++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+. ..++.++|
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~im-- 113 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-------RLELVDLV-- 113 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------CCCGGGGC--
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------cccHHHHh--
Confidence 3566687 678999999999999999999999999999987 99999999999998765431 34566654
Q ss_pred CCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 366 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
++++++.+++++.+|++.|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 114 ------------~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 114 ------------KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD-EYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ------------BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ------------cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-CCCCEEEEeeHHHHHHHHhC
Confidence 4789999999999999999999999999999 58999999999999999875
No 21
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.74 E-value=4.2e-18 Score=142.49 Aligned_cols=117 Identities=14% Similarity=0.331 Sum_probs=100.0
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|. ++++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++..... ..++.++|
T Consensus 7 v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------~~~v~~~m--- 75 (129)
T 3jtf_A 7 VADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------ALDIRSLV--- 75 (129)
T ss_dssp HHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--------TSCGGGGC---
T ss_pred HHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--------CcCHHHHh---
Confidence 445576 567899999999999999999999999999985 8999999999998754321 34566654
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
. ++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||+.||+++++|
T Consensus 76 ----------~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd-~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 76 ----------R-PAVFIPEVKRLNVLLREFRASRNHLAIVID-EHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ----------B-CCCEEETTCBHHHHHHHHHTSSCCEEEEEC-C-CCEEEEEEHHHHHHHHHH
T ss_pred ----------C-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 2 478999999999999999999999999999 58999999999999999864
No 22
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.73 E-value=2.7e-17 Score=136.14 Aligned_cols=119 Identities=18% Similarity=0.288 Sum_probs=104.1
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 369 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~ 369 (429)
++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|++|.+|+++....+. .....++.++|
T Consensus 3 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~----~~~~~~v~~~m------ 71 (125)
T 1pbj_A 3 VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGD----DLAEVKVWEVM------ 71 (125)
T ss_dssp HHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTC----CTTTSBHHHHC------
T ss_pred HHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCC----cccccCHHHHc------
Confidence 3455777899999999999999999999999999999 899999999999997665432 12356788876
Q ss_pred CCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 370 YSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.+++.+++||+| + |+++|+||..||++++.
T Consensus 72 -------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 72 -------ERDLVTISPRATIKEAAEKMVKNVVWRLLVEE-D-DEIIGVISATDILRAKM 121 (125)
T ss_dssp -------BCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHC
T ss_pred -------CCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 45789999999999999999999999999999 4 99999999999999875
No 23
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.72 E-value=2e-17 Score=140.30 Aligned_cols=120 Identities=14% Similarity=0.200 Sum_probs=103.7
Q ss_pred cccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCC--cEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 014157 288 PKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDND--SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 365 (429)
Q Consensus 288 ~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g--~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~ 365 (429)
.+++++|.+++.++.+++++.+|++.|.+++++++||+|++| +++|++|.+|+++....+.. .+.++.++|
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~~m-- 77 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLD-----LDGPAMPIA-- 77 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCC-----TTSBSGGGC--
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCC-----CCCCHHHHc--
Confidence 356677888999999999999999999999999999999888 99999999999986644211 134566654
Q ss_pred CCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 014157 366 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 427 (429)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l 427 (429)
.+++.++.++ ++.+|++.|.+++++++||+| ++|+++|+||..||++++
T Consensus 78 -----------~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 78 -----------NSPITVLDTD-PVHVAAEKMRRHNIRHVVVVN-KNGELVGVLSIRDLCFER 126 (141)
T ss_dssp -----------BCCCEEETTS-BHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHSCH
T ss_pred -----------CCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEc-CCCcEEEEEEHHHHHHHH
Confidence 5689999999 999999999999999999999 589999999999998765
No 24
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.72 E-value=6e-18 Score=142.90 Aligned_cols=120 Identities=13% Similarity=0.282 Sum_probs=100.7
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|. ++++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++...... ....++.++|
T Consensus 5 v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~-----~~~~~v~~~m--- 76 (136)
T 3lfr_A 5 VRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD-----GDSDDVKKLL--- 76 (136)
T ss_dssp HHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS-----GGGCCGGGTC---
T ss_pred hHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc-----CCCcCHHHHc---
Confidence 344576 568899999999999999999999999999987 89999999999987654211 1235666654
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
. +++++.+++++.+|++.|.+++++++||+| ++|+++|+||+.||+++++|
T Consensus 77 ----------~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 77 ----------R-PATFVPESKRLNVLLREFRANHNHMAIVID-EYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ----------B-CCCEEETTCBHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHTTC--
T ss_pred ----------C-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 3 488999999999999999999999999999 58999999999999998764
No 25
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.72 E-value=3.9e-17 Score=140.02 Aligned_cols=118 Identities=12% Similarity=0.298 Sum_probs=104.0
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 289 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 289 ~v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++....+. .+...++.++|
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----~~~~~~v~~~m--- 101 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGV----DMRDASIADVM--- 101 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSS----CCTTCBHHHHS---
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCC----CcccCcHHHHc---
Confidence 46666888 8999999999999999999999999999999999999999999998765432 23457888877
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHH
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFK 425 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~ 425 (429)
.+++.+|.+++++.+|++.|.+++++++||+|+ ++++|+||..||++
T Consensus 102 ----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 102 ----------TRGGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp ----------EESCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred ----------CCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 457889999999999999999999999999993 49999999999985
No 26
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=1.1e-17 Score=139.50 Aligned_cols=120 Identities=17% Similarity=0.215 Sum_probs=103.3
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 368 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~ 368 (429)
+++++|.+++.++.+++++.+|++.|.+++++++||+|+ |+++|++|.+|+++....+.. ...++.++|
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~-----~~~~v~~~m----- 74 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT-----VKEKLGEEL----- 74 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC-----TTCBCCGGG-----
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc-----ccCcHHHHc-----
Confidence 355668889999999999999999999999999999998 999999999999875543211 124455554
Q ss_pred CCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 369 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 75 --------~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 75 --------LETVRSYRPGEQLFDNLISVAAAKCSVVPLAD-EDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp --------CBCCCCBCTTSBGGGSHHHHHHCSSSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred --------cCCCcEECCCCCHHHHHHHHHhCCCcEEEEEC-CCCCEEEEEEHHHHHHHHH
Confidence 56788999999999999999999999999999 5899999999999999875
No 27
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.72 E-value=9.3e-17 Score=136.25 Aligned_cols=124 Identities=27% Similarity=0.513 Sum_probs=101.5
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCcc
Q 014157 294 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPY 373 (429)
Q Consensus 294 ~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~~~ 373 (429)
|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....+.+ .....++.++|..... .
T Consensus 17 ~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~m~~~~~----~ 89 (144)
T 2nyc_A 17 TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY---NDLSLSVGEALMRRSD----D 89 (144)
T ss_dssp BCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHHHHCC------
T ss_pred CCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccc---ccCCccHHHHHhcCcc----c
Confidence 55688999999999999999999999999999988999999999999986654321 1235688998743100 0
Q ss_pred cccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 374 ELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 374 ~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
..++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 90 ---~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 90 ---FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD-DVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -------CEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ---cCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEEHHHHHHHHH
Confidence 02588999999999999999999999999999 5899999999999999875
No 28
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.72 E-value=5.3e-17 Score=139.64 Aligned_cols=135 Identities=33% Similarity=0.587 Sum_probs=110.2
Q ss_pred cCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccc
Q 014157 274 LKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHIN 353 (429)
Q Consensus 274 l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~ 353 (429)
....++.+.++.+ ++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....+.+.
T Consensus 16 ~~~~l~~~~v~~~---------~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~--- 83 (152)
T 2uv4_A 16 MSKSLEELQIGTY---------ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN--- 83 (152)
T ss_dssp HTSBHHHHTCSBC---------SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCC---
T ss_pred HHhhHHHccCCcc---------CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhh---
Confidence 4556666665554 3688999999999999999999999999999899999999999999876543221
Q ss_pred cccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 354 LSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 354 l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
..+.++.++|..+ .+|..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++.
T Consensus 84 ~~~~~v~~~m~~~-------~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 84 NLDVSVTKALQHR-------SHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD-ENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp CTTSBGGGGGGTC-------CHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHC
T ss_pred hhcchHHHHHhhh-------hcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC-CCCeEEEEEEHHHHHHHHH
Confidence 1245677776321 01225788999999999999999999999999999 4899999999999999885
No 29
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.71 E-value=2.1e-17 Score=138.57 Aligned_cols=121 Identities=17% Similarity=0.266 Sum_probs=103.6
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccccccccHHHHHhcCCC
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQLGQD 368 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~-~~~~~~~~~l~l~~~~v~~~l~~~~~ 368 (429)
++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++ +...+. .....++.++|
T Consensus 10 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~~v~~~m----- 80 (133)
T 1y5h_A 10 ARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGL----DPNTATAGELA----- 80 (133)
T ss_dssp HHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTC----CTTTSBHHHHH-----
T ss_pred HHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCC----CccccCHHHHh-----
Confidence 44457778899999999999999999999999999998899999999999984 443321 12356888887
Q ss_pred CCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 369 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
.+++.++++++++.+|++.|.+++.+++||+| + |+++|+||..||++++.+
T Consensus 81 --------~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 81 --------RDSIYYVDANASIQEMLNVMEEHQVRRVPVIS-E-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp --------TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHTCC-
T ss_pred --------cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 45788999999999999999999999999999 4 899999999999998753
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.71 E-value=9.7e-17 Score=135.29 Aligned_cols=120 Identities=19% Similarity=0.393 Sum_probs=104.2
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHH-HHHHhcccccccccccccHHHHHhcCCC
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDI-TALAKDKAYAHINLSEMTIHQALQLGQD 368 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di-~~~~~~~~~~~l~l~~~~v~~~l~~~~~ 368 (429)
++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+++.+|+ .+....+. ....++.++|
T Consensus 10 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~~m----- 79 (138)
T 2p9m_A 10 VKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKY-----TLETTIGDVM----- 79 (138)
T ss_dssp GGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCC-----CSSCBHHHHS-----
T ss_pred HHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcc-----cCCcCHHHHh-----
Confidence 455588889999999999999999999999999999988999999999999 77654322 2246788876
Q ss_pred CCCcccccCCCceEEcCCCCHHHHHHHHHcCC-----CCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 369 SYSPYELRSQRCQMCLPSDTLHKVMERLANPG-----VRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~-----v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.+++ ++++||+| ++|+++|+||..||++++.
T Consensus 80 --------~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 80 --------TKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD-KNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp --------CSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred --------CCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC-CCCeEEEEEEHHHHHHHHH
Confidence 457889999999999999999999 99999999 5899999999999999874
No 31
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=8.4e-17 Score=139.72 Aligned_cols=125 Identities=20% Similarity=0.264 Sum_probs=104.3
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhccccc----ccccccccHHHHHh
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYA----HINLSEMTIHQALQ 364 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~----~l~l~~~~v~~~l~ 364 (429)
+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++........ .......++.++|
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im- 84 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVM- 84 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHHS-
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHHh-
Confidence 35566888899999999999999999999999999999889999999999998765421100 0012245677766
Q ss_pred cCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 365 LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.+|.+++++.+|++.|.+++++++||+| + |+++|+||..||++++.
T Consensus 85 ------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 85 ------------HTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-K-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ------------CSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE-T-TEEEEEECHHHHHHHHH
T ss_pred ------------cCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 56899999999999999999999999999999 4 99999999999999864
No 32
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.71 E-value=5.3e-17 Score=140.82 Aligned_cols=120 Identities=16% Similarity=0.334 Sum_probs=102.4
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 369 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~ 369 (429)
++++|.+ ++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++....+. .....++.++|
T Consensus 19 v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----~~~~~~v~~~m------ 87 (159)
T 3fv6_A 19 VKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQ----ELTSVPVHIIM------ 87 (159)
T ss_dssp GGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCS----CTTTCBGGGTS------
T ss_pred HHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccC----cccCcCHHHHH------
Confidence 4445766 559999999999999999999999999998999999999999998663321 12346777766
Q ss_pred CCcccccCC--CceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCC---eEEEEEeHHHHHHHhh
Q 014157 370 YSPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSK---RVEGIVSLSDIFKFLL 428 (429)
Q Consensus 370 ~~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g---~l~GiIs~~Dil~~l~ 428 (429)
.+ +++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++++.
T Consensus 88 -------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 88 -------TRMPNITVCRREDYVMDIAKHLIEKQIDALPVIK-DTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp -------EETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-ECSSSEEEEEEEEHHHHHHHHH
T ss_pred -------cCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEe-CCCcceeEEEEEEHHHHHHHHH
Confidence 44 788999999999999999999999999999 477 9999999999999875
No 33
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.71 E-value=3.4e-17 Score=140.19 Aligned_cols=127 Identities=19% Similarity=0.357 Sum_probs=102.6
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccc---------cccccccc
Q 014157 289 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY---------AHINLSEM 357 (429)
Q Consensus 289 ~v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~---------~~l~l~~~ 357 (429)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.+...... ........
T Consensus 6 ~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 6 TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGK 85 (152)
T ss_dssp BGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CC
T ss_pred EhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccc
Confidence 35566777 79999999999999999999999999999998999999999999753221100 00011235
Q ss_pred cHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 358 TIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 358 ~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
++.++| .++++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++.+
T Consensus 86 ~v~~~m-------------~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 86 LVGDLM-------------TPAPLVVEEKTNLEDAAKILLETKYRRLPVVD-SDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp BHHHHS-------------EESCCCEESSSBHHHHHHHHHHSSCCEEEEEC-TTSBEEEEEEHHHHHHHHHC
T ss_pred cHHHhc-------------CCCceEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 666665 55788999999999999999999999999999 58999999999999998753
No 34
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.71 E-value=9.6e-17 Score=135.41 Aligned_cols=120 Identities=18% Similarity=0.364 Sum_probs=103.0
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccccccccHHHHHhcCC
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQLGQ 367 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~-~~~~~~~~~l~l~~~~v~~~l~~~~ 367 (429)
+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++ +...+. ....++.++|
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~~m---- 78 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-----PYDIPVERIM---- 78 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-----CTTSBGGGTC----
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-----cccCCHHHHh----
Confidence 355668888999999999999999999999999999998899999999999974 433321 1245666654
Q ss_pred CCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 368 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 368 ~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.+++++++ |+| ++|+++|+||..||++++.
T Consensus 79 ---------~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd-~~g~~~Giit~~dil~~~~ 128 (138)
T 2yzi_A 79 ---------TRNLITANVNTPLGEVLRKMAEHRIKHI-LIE-EEGKIVGIFTLSDLLEASR 128 (138)
T ss_dssp ---------BCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE-ETTEEEEEEEHHHHHHHHH
T ss_pred ---------hCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC-CCCCEEEEEEHHHHHHHHH
Confidence 5688999999999999999999999999 999 4899999999999999875
No 35
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.71 E-value=2.2e-17 Score=142.34 Aligned_cols=118 Identities=18% Similarity=0.309 Sum_probs=101.7
Q ss_pred cCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEE-CC-CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 014157 290 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIV-DD-NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 365 (429)
Q Consensus 290 v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVv-d~-~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~ 365 (429)
++++|.+ +++++.+++++.+|++.|.+++++++||+ |+ +|+++|+||.+|+++....+. ..++.++|
T Consensus 22 v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~~m-- 92 (153)
T 3oco_A 22 ASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-------KAKISTIM-- 92 (153)
T ss_dssp HHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-------TSBGGGTC--
T ss_pred eeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-------CCcHHHHh--
Confidence 3344765 78999999999999999999999999999 65 489999999999998654421 34566644
Q ss_pred CCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 366 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 93 ------------~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 93 ------------RDIVSVPENMKVPDVMEEMSAHRVPMAIVID-EYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ------------BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC-TTSCEEEEECHHHHHHHHHC
T ss_pred ------------CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe-CCCCEEEEeeHHHHHHHHhc
Confidence 4789999999999999999999999999999 58999999999999999875
No 36
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.70 E-value=8e-17 Score=135.02 Aligned_cols=120 Identities=15% Similarity=0.236 Sum_probs=103.8
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 368 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~ 368 (429)
+++++|.+++.++.+++++.+|++.|.+++++++||+| +|+++|++|.+|+++....+.. ...++.++|
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~~~----- 73 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS-----LETKAEEFM----- 73 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC-----TTCBGGGTS-----
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC-----cccCHHHHc-----
Confidence 35566888899999999999999999999999999999 8999999999999876654311 135666655
Q ss_pred CCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 369 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 74 --------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 74 --------TASLITIREDSPITGALALMRQFNIRHLPVVD-DKGNLKGIISIRDITRAID 124 (133)
T ss_dssp --------EECCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred --------CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHH
Confidence 45788999999999999999999999999999 5899999999999998874
No 37
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=4e-17 Score=142.49 Aligned_cols=121 Identities=18% Similarity=0.352 Sum_probs=103.2
Q ss_pred cCCCCCC---CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNRR---PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~~---~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++....... .....++.++|
T Consensus 26 v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~m--- 99 (165)
T 3fhm_A 26 VKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGA---ASLQQSVSVAM--- 99 (165)
T ss_dssp HHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGG---GGGTSBGGGTS---
T ss_pred HHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCC---ccccCCHHHHh---
Confidence 3444663 68999999999999999999999999999999999999999999976654321 12245677655
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++++|.+++++.+|++.|.+++++++||+| + |+++|+||..||++++.
T Consensus 100 ----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 100 ----------TKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE-N-GRLAGIISIGDVVKARI 149 (165)
T ss_dssp ----------BSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred ----------cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 56889999999999999999999999999999 5 99999999999999875
No 38
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.70 E-value=1.2e-16 Score=140.88 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=100.5
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|. ++++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|++....... ..++. +
T Consensus 38 v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-------~~~v~--~--- 105 (173)
T 3ocm_A 38 IRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-------RVRRN--R--- 105 (173)
T ss_dssp STTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------SCCGG--G---
T ss_pred HHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-------cchhH--h---
Confidence 445575 368899999999999999999999999999876 89999999999998654321 23444 3
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||+++++|
T Consensus 106 ----------~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd-e~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 106 ----------LRDPIIVHESIGILRLMDTLKRSRGQLVLVAD-EFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp ----------SBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC-TTCCEEEEECHHHHHHHHHC
T ss_pred ----------cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe-CCCCEEEEEeHHHHHHHHhC
Confidence 34788999999999999999999999999999 58999999999999999875
No 39
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.70 E-value=3.7e-17 Score=141.15 Aligned_cols=122 Identities=20% Similarity=0.271 Sum_probs=100.0
Q ss_pred CCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 014157 291 GEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 368 (429)
Q Consensus 291 ~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~ 368 (429)
+++|. ++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++...........+...++.++|
T Consensus 18 ~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m----- 92 (156)
T 3ctu_A 18 ETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMT----- 92 (156)
T ss_dssp GGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGC-----
T ss_pred HHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhc-----
Confidence 34466 57899999999999999999999999999999999999999999998765432211111235566654
Q ss_pred CCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 369 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.+++ ++|||| ++|+++|+||.+||++++.
T Consensus 93 --------~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd-~~g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 93 --------KTDVAVVSPDFTITEVLHKLVDES--FLPVVD-AEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp --------BCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC-TTSBEEEEEETTHHHHHHH
T ss_pred --------cCCceeeCCCCcHHHHHHHHHHcC--eEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 568899999999999999999986 799999 5899999999999999874
No 40
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.70 E-value=2.9e-16 Score=146.07 Aligned_cols=200 Identities=11% Similarity=0.091 Sum_probs=132.1
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCC---CCc----
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS---SLP---- 272 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~---~~~---- 272 (429)
++++|.++++++.+++++.+|+++|.+++++++||+| ++| +++|++|..|+++++......... ...
T Consensus 9 v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd---~~~---~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 9 VEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVAD---GNN---HLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp GGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEEC---TTC---BEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred HHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---EEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 3557899999999999999999999999999999996 446 899999999999987543211000 000
Q ss_pred -------------ccCCccccccCcccc-cccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC----------
Q 014157 273 -------------ILKLPICAIPVGTWV-PKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN---------- 328 (429)
Q Consensus 273 -------------~l~~~v~~l~i~~~~-~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~---------- 328 (429)
......+.+.++... ..+.+.+....+.+-.+ -.++...+.+.+++++++++..
T Consensus 83 ~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a 160 (245)
T 3l2b_A 83 LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELA 160 (245)
T ss_dssp HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHH
T ss_pred HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHH
Confidence 000001111111111 11222233333333333 3788888899999999888532
Q ss_pred --CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCcccccC-CCceEEcCCCCHHHHHHHHHcCCCCEEE
Q 014157 329 --DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRS-QRCQMCLPSDTLHKVMERLANPGVRRLV 405 (429)
Q Consensus 329 --g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~~~~~~~-~~~~~v~~~~~l~~a~~~m~~~~v~~l~ 405 (429)
+.+..+.+..|........ ....+++++| . +++.++++++++.+|++.|.+++++++|
T Consensus 161 ~~~~~~~i~t~~d~~~~~~~~------~~~~~v~~im-------------~~~~~~~~~~~~~~~~~~~~m~~~~~~~~p 221 (245)
T 3l2b_A 161 KKNNITVITTPHDSFTASRLI------VQSLPVDYVM-------------TKDNLVAVSTDDLVEDVKVTMSETRYSNYP 221 (245)
T ss_dssp HHHTCEEEECSSCHHHHHHHG------GGGSBHHHHS-------------BCTTCCCEETTSBHHHHHHHHHHHCCSEEE
T ss_pred HHcCCeEEEeCCChHHHHHHH------hcCCceeeEe-------------cCCccEEECCCCcHHHHHHHHHhcCCceEE
Confidence 2234555555554433221 1135677766 5 5899999999999999999999999999
Q ss_pred EEeCCCCeEEEEEeHHHHHHHh
Q 014157 406 IVEAGSKRVEGIVSLSDIFKFL 427 (429)
Q Consensus 406 VVd~~~g~l~GiIs~~Dil~~l 427 (429)
||| ++|+++|+||++|++++.
T Consensus 222 Vvd-~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 222 VID-ENNKVVGSIARFHLISTH 242 (245)
T ss_dssp EEC-TTCBEEEEEECC------
T ss_pred EEc-CCCeEEEEEEHHHhhchh
Confidence 999 589999999999999864
No 41
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=138.23 Aligned_cols=130 Identities=15% Similarity=0.223 Sum_probs=103.8
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC--CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCC
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD--NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQ 367 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~--~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~ 367 (429)
++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|..|+++....+..........++.++|....
T Consensus 15 v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~~ 94 (164)
T 2pfi_A 15 VEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARGC 94 (164)
T ss_dssp HHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTTC
T ss_pred HHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcccc
Confidence 44558888999999999999999999999999999996 7999999999999986644321111122467888885421
Q ss_pred CCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 368 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 368 ~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
. ....+.++.+++++.+|++.|.+++++++||+| +|+++|+||.+||++++.
T Consensus 95 ~-------~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 95 P-------TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS--RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp C-------CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred c-------ccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 0 011268899999999999999999999999999 599999999999999874
No 42
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.69 E-value=2e-16 Score=136.77 Aligned_cols=124 Identities=8% Similarity=0.130 Sum_probs=103.4
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCE-EEEECCCCcEEEEEeHHHHHHHHhcc------ccc-----cccccc
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSS-IPIVDDNDSLLDIYCRSDITALAKDK------AYA-----HINLSE 356 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~-lpVvd~~g~lvGivt~~Di~~~~~~~------~~~-----~l~l~~ 356 (429)
+++++|.++++++.+++++.+|++.|.++++++ +||+|++ +++|++|.+|+++..... ... ......
T Consensus 17 ~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (157)
T 1o50_A 17 DVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIA 95 (157)
T ss_dssp HHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSS
T ss_pred cHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcC
Confidence 456678889999999999999999999999999 9999977 999999999998764310 000 001234
Q ss_pred ccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 357 MTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 357 ~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.++.++| .+ ++++++++++.+|++.|.+++++++||+| ++|+++|+||..||++++.
T Consensus 96 ~~v~~im-------------~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 96 KNASEIM-------------LD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD-EKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CBHHHHC-------------BC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred CcHHHHc-------------CC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 5667655 66 88999999999999999999999999999 5899999999999999874
No 43
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.69 E-value=1.4e-16 Score=137.62 Aligned_cols=123 Identities=14% Similarity=0.308 Sum_probs=103.8
Q ss_pred ccccCCCCC------CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHH
Q 014157 287 VPKIGEPNR------RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIH 360 (429)
Q Consensus 287 ~~~v~~~~~------~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~ 360 (429)
+.+++++|. ++++++.+++++.+|++.|.+++++++||++ +|+++|++|.+|+++....... .....++.
T Consensus 6 ~~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~ 81 (157)
T 4fry_A 6 STTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQER---SSKATRVE 81 (157)
T ss_dssp -CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTC---CSSSCBHH
T ss_pred HHHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccC---CccccCHH
Confidence 334555565 4569999999999999999999999999965 8999999999999986544321 12357888
Q ss_pred HHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 361 QALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 361 ~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
++| .+++.++.+++++.+|+++|.+++++++||+| +|+++|+||..||++++.
T Consensus 82 ~~m-------------~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 82 EIM-------------TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD--GGKLIGLISIGDLVKSVI 134 (157)
T ss_dssp HHS-------------BSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred HHc-------------CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 876 45788999999999999999999999999999 599999999999999875
No 44
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.69 E-value=1.5e-16 Score=141.44 Aligned_cols=123 Identities=16% Similarity=0.275 Sum_probs=104.9
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 368 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~ 368 (429)
+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++........ .....++.++|
T Consensus 10 ~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~---~~~~~~v~~im----- 81 (184)
T 1pvm_A 10 RVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK---KPDEVPIRLVM----- 81 (184)
T ss_dssp BGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCC---CGGGSBGGGTS-----
T ss_pred CHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc---CcccCCHHHHh-----
Confidence 4566688899999999999999999999999999999988999999999999876542111 11245666655
Q ss_pred CCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 369 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|+++|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 82 --------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 82 --------RKPIPKVKSDYDVKDVAAYLSENGLERCAVVD-DPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp --------BSSCCEEETTCBHHHHHHHHHHHTCSEEEEEC-TTCCEEEEEEHHHHTTTSC
T ss_pred --------CCCCcEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 56789999999999999999999999999999 4799999999999998763
No 45
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.68 E-value=1.2e-16 Score=136.94 Aligned_cols=122 Identities=22% Similarity=0.238 Sum_probs=100.4
Q ss_pred CCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccc-cccccccHHHHHhcCC
Q 014157 291 GEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAH-INLSEMTIHQALQLGQ 367 (429)
Q Consensus 291 ~~~~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~-l~l~~~~v~~~l~~~~ 367 (429)
+++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++......... -.....++.++|
T Consensus 18 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m---- 93 (150)
T 3lqn_A 18 KDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVM---- 93 (150)
T ss_dssp HHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTC----
T ss_pred hhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHh----
Confidence 34466 35889999999999999999999999999999999999999999998764321100 011234556544
Q ss_pred CCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 368 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 368 ~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.++++ +|||| ++|+++|+||..||++++.
T Consensus 94 ---------~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd-~~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 94 ---------KQDIPVLKLEDSFAKALEMTIDHPF--ICAVN-EDGYFEGILTRRAILKLLN 142 (150)
T ss_dssp ---------BSSCCEEETTCBHHHHHHHHHHCSE--EEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ---------cCCCceeCCCCCHHHHHHHHHhCCE--EEEEC-CCCcEEEEEEHHHHHHHHH
Confidence 6688999999999999999999987 99999 5899999999999999874
No 46
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.68 E-value=1.2e-16 Score=134.45 Aligned_cols=121 Identities=13% Similarity=0.274 Sum_probs=101.7
Q ss_pred cCCCCC---CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNR---RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~---~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
++++|. ++++++.+++++.+|++.|.+++++++||+| +|+++|++|.+|+++....... .....++.++|
T Consensus 8 v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~m--- 80 (135)
T 2rc3_A 8 VKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK---PVKDTQVKEIM--- 80 (135)
T ss_dssp HHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS---CGGGSBGGGTS---
T ss_pred HHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC---CcccCCHHHhc---
Confidence 344566 6889999999999999999999999999998 8999999999999863322111 12245667655
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
.+++.++.+++++.+|++.|.+++++++||+| +|+++|+||..||++++.+
T Consensus 81 ----------~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 81 ----------TRQVAYVDLNNTNEDCMALITEMRVRHLPVLD--DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ----------BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred ----------cCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe--CCEEEEEEEHHHHHHHHHh
Confidence 56889999999999999999999999999999 5999999999999998753
No 47
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.68 E-value=5.1e-17 Score=142.60 Aligned_cols=155 Identities=19% Similarity=0.276 Sum_probs=112.7
Q ss_pred HHHHHHHHHhhhccccccCCCCccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHHHHhcCCC
Q 014157 92 VSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGS 171 (429)
Q Consensus 92 ~~~~~~~~fl~~~~~~d~~p~s~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~ 171 (429)
..++.+...|++..+.|+| +.++++++++.|+.+|++.|.+++++++||+|.+ |+++|++|..|++..+.....
T Consensus 6 ~~~~~~~~~l~~~~V~diM--~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~--- 79 (170)
T 4esy_A 6 ARRRAIARAIRQVPIRDIL--TSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI--- 79 (170)
T ss_dssp HHHHHHHHHHHTSBGGGGC--CSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH---
T ss_pred HHHHHHHHHHcCCCHHHhc--CCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc---
Confidence 3466777888999999999 4589999999999999999999999999999964 899999999998754311000
Q ss_pred CCChhhhhh-hhHHHHHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEE
Q 014157 172 NLTEEELET-HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHI 250 (429)
Q Consensus 172 ~l~~~~l~~-~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgi 250 (429)
....+.+.. ............ .....++.+|+++++++.+++++.+|+++|.+++++++||+| +| +++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd----~g---~lvGi 150 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFET--GRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ----DG---VPVGI 150 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHH--HTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE----TT---EEEEE
T ss_pred cchhhhhhhccchhhHHhhhcc--ccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE----CC---EEEEE
Confidence 000000000 000000000000 011223457899999999999999999999999999999995 36 89999
Q ss_pred EehhhHHHHHH
Q 014157 251 ASLSGILKCVC 261 (429)
Q Consensus 251 lt~~dIl~~l~ 261 (429)
+|.+||++++.
T Consensus 151 vt~~Dil~~l~ 161 (170)
T 4esy_A 151 VTRRDLLKLLL 161 (170)
T ss_dssp EEHHHHTTTSC
T ss_pred EEHHHHHHHHH
Confidence 99999997654
No 48
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.68 E-value=1.3e-16 Score=140.83 Aligned_cols=125 Identities=23% Similarity=0.372 Sum_probs=100.6
Q ss_pred cCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccc--------cc--------
Q 014157 290 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY--------AH-------- 351 (429)
Q Consensus 290 v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~--------~~-------- 351 (429)
++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|++++...... ..
T Consensus 6 v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (180)
T 3sl7_A 6 VGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTF 85 (180)
T ss_dssp HHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCSH
T ss_pred HHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhhh
Confidence 4455776 78999999999999999999999999999999999999999999842210000 00
Q ss_pred -------cccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHH
Q 014157 352 -------INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 424 (429)
Q Consensus 352 -------l~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil 424 (429)
......++.++| .+++++|.+++++.+|+++|.+++++++||+| ++|+++|+||..||+
T Consensus 86 ~~~~~~~~~~~~~~v~~~m-------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil 151 (180)
T 3sl7_A 86 NELQKLISKTYGKVVGDLM-------------TPSPLVVRDSTNLEDAARLLLETKFRRLPVVD-ADGKLIGILTRGNVV 151 (180)
T ss_dssp HHHHHHHHTTTTCBHHHHS-------------EESCCCEETTSBHHHHHHHHTTSTTCEEEEEC-TTCBEEEEEEHHHHH
T ss_pred HHHHHHHhccccccHHHHh-------------CCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHH
Confidence 001134555554 56788999999999999999999999999999 589999999999999
Q ss_pred HHhh
Q 014157 425 KFLL 428 (429)
Q Consensus 425 ~~l~ 428 (429)
+++.
T Consensus 152 ~~~~ 155 (180)
T 3sl7_A 152 RAAL 155 (180)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 49
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.67 E-value=3.1e-16 Score=135.28 Aligned_cols=123 Identities=17% Similarity=0.214 Sum_probs=101.2
Q ss_pred cCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhccc-ccccccccccHHHHHhcC
Q 014157 290 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA-YAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~-~~~l~l~~~~v~~~l~~~ 366 (429)
++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++...... +....+...++.++|
T Consensus 13 v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m--- 89 (157)
T 2emq_A 13 VKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVM--- 89 (157)
T ss_dssp STTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTC---
T ss_pred HHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHHHh---
Confidence 4555765 7889999999999999999999999999998899999999999998654321 100011234555544
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.++++ +|||| ++|+++|+||.+||++++.
T Consensus 90 ----------~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd-~~g~~~Giit~~dil~~~~ 138 (157)
T 2emq_A 90 ----------NRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN-DDGYFAGIFTRREVLKQLN 138 (157)
T ss_dssp ----------BCCCCEEETTSBHHHHHHHHHHSSE--EEEEC-SSSSEEEEEEHHHHHHHHH
T ss_pred ----------CCCCceecCCCcHHHHHHHHhhCCE--EEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 6689999999999999999999987 99999 4899999999999999874
No 50
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.67 E-value=2.7e-16 Score=136.17 Aligned_cols=123 Identities=18% Similarity=0.214 Sum_probs=102.5
Q ss_pred cCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhccc-ccccccccccHHHHHhcC
Q 014157 290 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA-YAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~-~~~l~l~~~~v~~~l~~~ 366 (429)
++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|..|++....... +........++.++|
T Consensus 16 v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m--- 92 (159)
T 1yav_A 16 VGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVM--- 92 (159)
T ss_dssp HHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHS---
T ss_pred HHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhc---
Confidence 3444766 7899999999999999999999999999998899999999999998764421 101112356788876
Q ss_pred CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 367 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++.++.+++++.+|++.|.+.++ +||+| ++|+++|+||.+||++++.
T Consensus 93 ----------~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd-~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 93 ----------LTDIPRLHINDPIMKGFGMVINNGF--VCVEN-DEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp ----------BCSCCEEETTSBHHHHHHHTTTCSE--EEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ----------CCCCceEcCCCCHHHHHHHHHhCCE--EEEEe-CCCeEEEEEEHHHHHHHHH
Confidence 5578999999999999999999987 99999 4899999999999999864
No 51
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.67 E-value=7.5e-16 Score=139.47 Aligned_cols=163 Identities=15% Similarity=0.148 Sum_probs=127.3
Q ss_pred eeEeeeHHHHHHHHHHHhcCCCCCChhhhhhhhHHHHHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhc--
Q 014157 150 FVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-- 227 (429)
Q Consensus 150 ~vGilt~~Dii~il~~~~~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~-- 227 (429)
++.-++..|..+++..+. .....+.|..+...+...+...+.|+..++|++|+++++++++++|+.+|++.|.++
T Consensus 9 ~~~~m~~dd~~dll~~l~---~~~~~~~l~~l~~~e~~~i~~~l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~ 85 (205)
T 3kxr_A 9 LFAQLSPEDLIEWSDYLP---ESFTDRALAQMGERQRQRFELYDQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIEL 85 (205)
T ss_dssp SGGGSCHHHHHHTTTTSC---HHHHHHHHHHSCHHHHHHHHHHHHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCC
T ss_pred HHHcCCHHHHHHHHHhCC---HHHHHHHHHcCCHHHHHHHHHHhCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCc
Confidence 334456677776663321 111123344445555566667778899999999999999999999999999999987
Q ss_pred -CCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCC
Q 014157 228 -EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSAS 306 (429)
Q Consensus 228 -~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~s 306 (429)
+++.+||+| +.+ +++|++|.+|++.. ....+ ++++|.++++++.++++
T Consensus 86 ~~~~~~~Vvd---~~~---~lvGivt~~dll~~-------------~~~~~------------v~~im~~~~~~v~~~~~ 134 (205)
T 3kxr_A 86 DCNDNLFIVD---EAD---KYLGTVRRYDIFKH-------------EPHEP------------LISLLSEDSRALTANTT 134 (205)
T ss_dssp TTCCEEEEEC---TTC---BEEEEEEHHHHTTS-------------CTTSB------------GGGGCCSSCCCEETTSC
T ss_pred cCeeEEEEEc---CCC---eEEEEEEHHHHHhC-------------CCcch------------HHHHhcCCCeEECCCCC
Confidence 889999996 456 89999999998631 01222 34448888999999999
Q ss_pred HHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 307 LSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 307 l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
+.+|++.|.+++++.+||+|++|+++|+||..|++..+..
T Consensus 135 l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 135 LLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp HHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 9999999999999999999999999999999999987754
No 52
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.66 E-value=4.1e-16 Score=141.22 Aligned_cols=116 Identities=19% Similarity=0.239 Sum_probs=101.6
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhc---CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQA---QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 365 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~---~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~ 365 (429)
+++++|.++++++.+++++.+|++.|.++ +++.+||+|++|+++|++|.+|++... .+.++.++|
T Consensus 55 ~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~im-- 122 (205)
T 3kxr_A 55 EIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE----------PHEPLISLL-- 122 (205)
T ss_dssp CGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC----------TTSBGGGGC--
T ss_pred hHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC----------CcchHHHHh--
Confidence 35556888999999999999999999987 889999999999999999999986421 135667655
Q ss_pred CCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 366 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.++++++++++++.+|++.|.+++++.+|||| ++|+++|+||..||++.+.
T Consensus 123 -----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD-~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 123 -----------SEDSRALTANTTLLDAAEAIEHSREIELPVID-DAGELIGRVTLRAATALVR 173 (205)
T ss_dssp -----------CSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -----------cCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 56889999999999999999999999999999 5899999999999998864
No 53
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.66 E-value=2.6e-16 Score=136.09 Aligned_cols=114 Identities=11% Similarity=0.296 Sum_probs=99.1
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCC-cEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 014157 289 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDND-SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 365 (429)
Q Consensus 289 ~v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g-~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~ 365 (429)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|+++ +++|++|.+|+++....+ ...++.++|
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~~im-- 109 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLKSIL-- 109 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHHHHC--
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHHHHc--
Confidence 35556765 689999999999999999999999999999874 999999999998754332 246788876
Q ss_pred CCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHH
Q 014157 366 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 424 (429)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil 424 (429)
. ++.++++++++.+|++.|.+++.+++||+| ++|+++|+||+.||+
T Consensus 110 -----------~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd-~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 110 -----------R-PAVFVPEGKSLTALLKEFREQRNHMAIVID-EYGGTSGLVTFEDII 155 (156)
T ss_dssp -----------B-CCCEEETTSBHHHHHHHHHHTTCCEEEEEC-TTSSEEEEEEHHHHC
T ss_pred -----------C-CCEEECCCCCHHHHHHHHHhcCCeEEEEEC-CCCCEEEEEEHHHhc
Confidence 2 478999999999999999999999999999 589999999999986
No 54
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.65 E-value=1e-15 Score=139.43 Aligned_cols=157 Identities=13% Similarity=0.170 Sum_probs=100.1
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++.+|.++++++.+++|+.+|+++|.+++++.+||+| +++ +++|++|.+|+++.+ ...+
T Consensus 15 ~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd---~~~---~l~Givt~~dl~~~~-------------~~~~-- 73 (213)
T 1vr9_A 15 VKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKD---REG---HFRGVVNKEDLLDLD-------------LDSS-- 73 (213)
T ss_dssp GGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEEC---TTS---BEEEEEEGGGGTTSC-------------TTSB--
T ss_pred HHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEc---CCC---EEEEEEEHHHHHhhc-------------CCCc--
Confidence 3557899999999999999999999999999999996 346 799999999986421 0122
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccH
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTI 359 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v 359 (429)
+.++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++...... ..
T Consensus 74 ----------v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~ 134 (213)
T 1vr9_A 74 ----------VFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AM 134 (213)
T ss_dssp ----------SGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C-
T ss_pred ----------HHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cC
Confidence 44448788999999999999999999999999999998899999999999998654321 11
Q ss_pred HHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEe
Q 014157 360 HQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 408 (429)
Q Consensus 360 ~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd 408 (429)
.+.+.. + .+.+.....++.+|.+.|.+++++.++|++
T Consensus 135 ~~~~~~---------l---~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 135 DVPGIR---------F---SVLLEDKPGELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp -------------------------------------------------
T ss_pred CCCcEE---------E---EEEeCCCCccHHHHHHHHHHCCCcEEEEEE
Confidence 221100 0 111123344599999999999999999986
No 55
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.65 E-value=3.9e-16 Score=142.25 Aligned_cols=121 Identities=17% Similarity=0.219 Sum_probs=103.8
Q ss_pred cccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHH
Q 014157 284 GTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 363 (429)
Q Consensus 284 ~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l 363 (429)
.+|...++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+.+... +.++.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----------~~~v~~im 78 (213)
T 1vr9_A 9 HHHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----------DSSVFNKV 78 (213)
T ss_dssp ----CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----------TSBSGGGC
T ss_pred cccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----------CCcHHHHc
Confidence 45666777889999999999999999999999999999999998899999999999975321 24556654
Q ss_pred hcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 364 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.++++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 79 -------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 79 -------------SLPDFFVHEEDNITHALLLFLEHQEPYLPVVD-EEMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp -------------BCTTCCEETTSBHHHHHHHHHHCCCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred -------------cCCCEEECCCCcHHHHHHHHHHhCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 56889999999999999999999999999999 4799999999999998763
No 56
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.63 E-value=3.2e-15 Score=131.35 Aligned_cols=122 Identities=13% Similarity=0.119 Sum_probs=102.2
Q ss_pred cCCCCccCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCccc
Q 014157 197 IDSHGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPIL 274 (429)
Q Consensus 197 ~~~~g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l 274 (429)
...++++|. .+++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+....
T Consensus 41 ~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~~---------- 105 (172)
T 3lhh_A 41 ERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCR--NNVD---DMVGIISAKQLLSESIAGE---------- 105 (172)
T ss_dssp --CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEES--SSTT---SEEEEEEHHHHHHHHHTTC----------
T ss_pred CCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---eEEEEEEHHHHHHHHhhcC----------
Confidence 345677888 7899999999999999999999999999996 2225 7999999999998765320
Q ss_pred CCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 275 KLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 275 ~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
..+ ++++| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+..
T Consensus 106 ~~~------------v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 106 RLE------------LVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp CCC------------GGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred ccc------------HHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 223 33447 789999999999999999999999999999999999999999999987654
No 57
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.63 E-value=5e-15 Score=137.79 Aligned_cols=139 Identities=17% Similarity=0.242 Sum_probs=103.7
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC--CcEEEEEeHHHHHHHHhcccc--ccc------------
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN--DSLLDIYCRSDITALAKDKAY--AHI------------ 352 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~--g~lvGivt~~Di~~~~~~~~~--~~l------------ 352 (429)
.++++|.++++++.+++++.+|.++|.+++++++||||++ ++++|+||++||++++..... ...
T Consensus 14 ~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~ 93 (250)
T 2d4z_A 14 QVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEGR 93 (250)
T ss_dssp BTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC--
T ss_pred ChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccccc
Confidence 5778899999999999999999999999999999999863 689999999999976542210 000
Q ss_pred ----------------cccc---------------------------------------------------------ccH
Q 014157 353 ----------------NLSE---------------------------------------------------------MTI 359 (429)
Q Consensus 353 ----------------~l~~---------------------------------------------------------~~v 359 (429)
.+.+ ++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 173 (250)
T 2d4z_A 94 NGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLTL 173 (250)
T ss_dssp -------------------------------------------------------------------------CCSCCBH
T ss_pred ccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccCh
Confidence 0000 000
Q ss_pred HHHH-----hcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhC
Q 014157 360 HQAL-----QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 429 (429)
Q Consensus 360 ~~~l-----~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~~ 429 (429)
.+.. ...........+|...++++.++++|.+|..+|...|++++||++ .|+|+||||+.||++++.+
T Consensus 174 ~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 174 EEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHHHHHH
Confidence 0000 000000000125788899999999999999999999999999999 6999999999999999864
No 58
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.63 E-value=9.7e-16 Score=135.80 Aligned_cols=124 Identities=13% Similarity=0.243 Sum_probs=100.3
Q ss_pred cCCCCCCC----ceee--cCCCCHHHHHHHHHhcCCCEEEEE--CCCCcEEEEEeHHHHHHHHhccccccc---------
Q 014157 290 IGEPNRRP----LAML--RPSASLSAALNLLVQAQVSSIPIV--DDNDSLLDIYCRSDITALAKDKAYAHI--------- 352 (429)
Q Consensus 290 v~~~~~~~----~~~v--~~~~sl~~a~~~m~~~~~~~lpVv--d~~g~lvGivt~~Di~~~~~~~~~~~l--------- 352 (429)
++++|.+. ++++ .+++++.+|++.|.+++++++||+ |++|+++|+||..|+++..........
T Consensus 13 v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~ 92 (185)
T 2j9l_A 13 AMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIY 92 (185)
T ss_dssp HHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEE
T ss_pred HHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccccceee
Confidence 44446665 7788 999999999999999999999999 788999999999999976543210000
Q ss_pred -----------ccccccHHHHHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHH
Q 014157 353 -----------NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLS 421 (429)
Q Consensus 353 -----------~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~ 421 (429)
.....++.+ +|.+++.+|.+++++.+|++.|.+++++++||+| +|+++|+||+.
T Consensus 93 ~~~~~~~~~~~~~~~~~v~~-------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~ 157 (185)
T 2j9l_A 93 FTEHSPPLPPYTPPTLKLRN-------------ILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITKK 157 (185)
T ss_dssp CSSSCCCCCTTCCCCEECGG-------------GEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHH
T ss_pred cccCCcccccccccCccHHH-------------hhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEHH
Confidence 011233443 4567899999999999999999999999999999 69999999999
Q ss_pred HHHHHhh
Q 014157 422 DIFKFLL 428 (429)
Q Consensus 422 Dil~~l~ 428 (429)
||++++.
T Consensus 158 dll~~l~ 164 (185)
T 2j9l_A 158 DVLKHIA 164 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 59
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.63 E-value=2.4e-15 Score=123.81 Aligned_cols=116 Identities=20% Similarity=0.335 Sum_probs=100.0
Q ss_pred ccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccc
Q 014157 202 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 281 (429)
Q Consensus 202 ~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 281 (429)
++|.++++++.+++++.+|++.|.+++.+.+||+| +++ +++|++|..|+++++.... .+
T Consensus 5 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~~-----------~~---- 63 (122)
T 3kpb_A 5 DILSKPPITAHSNISIMEAAKILIKHNINHLPIVD---EHG---KLVGIITSWDIAKALAQNK-----------KT---- 63 (122)
T ss_dssp HHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEEC---TTS---BEEEEECHHHHHHHHHTTC-----------CB----
T ss_pred HhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---CEEEEEEHHHHHHHHHhcc-----------cC----
Confidence 35788999999999999999999999999999996 456 8999999999998765421 12
Q ss_pred cCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 282 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 282 ~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|..|+++.+..
T Consensus 64 --------v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 64 --------IEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp --------GGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred --------HHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 333477788999999999999999999999999999988999999999999987643
No 60
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.63 E-value=4.8e-15 Score=126.68 Aligned_cols=120 Identities=12% Similarity=0.149 Sum_probs=101.6
Q ss_pred CCCccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCC
Q 014157 199 SHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKL 276 (429)
Q Consensus 199 ~~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~ 276 (429)
.++++|.+ +++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+.... ..
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~~----------~~ 88 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCR--KNKD---DILGFVHIRDLYNQKINEN----------KI 88 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEES--SSTT---SEEEEEEHHHHHHHHHHHS----------CC
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHhcCC----------Cc
Confidence 44567887 899999999999999999999999999996 2225 7999999999998775431 12
Q ss_pred ccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 277 PICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 277 ~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
+ ++++| +++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 89 ~------------v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 89 E------------LEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp C------------GGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred c------------HHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 2 33447 688999999999999999999999999999999999999999999986543
No 61
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.60 E-value=3.3e-15 Score=129.28 Aligned_cols=119 Identities=16% Similarity=0.204 Sum_probs=96.9
Q ss_pred CCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCc
Q 014157 205 PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVG 284 (429)
Q Consensus 205 ~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~ 284 (429)
..+++++.+++|+.+|+.+|.+++++++||+| +++ +++|++|.+|+++++....... ......+
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd---~~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~~~------- 87 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVT---DEK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTD------- 87 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC---C-C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSB-------
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc---CCC---cEEEEEEecchhhhhhhccccc---ccccccC-------
Confidence 36899999999999999999999999999996 446 7999999999998876542110 0111222
Q ss_pred ccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 285 TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 285 ~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
++++|.+++.++.+++++.+|+++|.+++ .+||+|++|+++|+||.+||++.+..
T Consensus 88 -----v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 88 -----IVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -----GGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred -----HHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 44458889999999999999999998765 49999999999999999999986643
No 62
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.60 E-value=2.7e-15 Score=124.89 Aligned_cols=120 Identities=19% Similarity=0.255 Sum_probs=100.4
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++++|.+++.++.+++++.+|++.|.+++.+.+||+| + + +++|++|.+|+++.+.... ....
T Consensus 7 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~-~---~~~Givt~~dl~~~~~~~~--------~~~~--- 68 (128)
T 3gby_A 7 FSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLD---G-E---RYLGMVHLSRLLEGRKGWP--------TVKE--- 68 (128)
T ss_dssp GGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHTTCSSSC--------CTTC---
T ss_pred HHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE---C-C---EEEEEEEHHHHHHHHhhCC--------cccC---
Confidence 3557899999999999999999999999999999996 3 6 8999999999986432110 0011
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
.++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|..|+++.+..
T Consensus 69 ---------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 69 ---------KLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ---------BCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred ---------cHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 2344477789999999999999999999999999999999999999999999987643
No 63
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.60 E-value=7.5e-15 Score=122.63 Aligned_cols=120 Identities=10% Similarity=0.131 Sum_probs=98.9
Q ss_pred CCCccCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCC
Q 014157 199 SHGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKL 276 (429)
Q Consensus 199 ~~g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~ 276 (429)
.++++|. .+++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+.... ...
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~~Givt~~dl~~~~~~~~---------~~~ 72 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYS--EQKD---NIIGFVHRLELFKMQQSGS---------GQK 72 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEES--SSTT---CEEEECCHHHHHHHHHTTT---------TTS
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---cEEEEEEHHHHHHHHhcCC---------CcC
Confidence 3456777 5677999999999999999999999999996 2325 7999999999998765421 122
Q ss_pred ccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 277 PICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 277 ~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
+++++ | +++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 73 ~v~~~------------m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 73 QLGAV------------M-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp BHHHH------------S-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CHHHH------------h-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 33333 5 35789999999999999999999999999999999999999999997653
No 64
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.58 E-value=1.8e-14 Score=120.44 Aligned_cols=120 Identities=21% Similarity=0.320 Sum_probs=101.7
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++++|.++++++.+++++.+|++.|.+++.+.+||+| ++ +++|++|..|+++++..... ...+
T Consensus 6 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~~~-- 68 (133)
T 2ef7_A 6 VKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LETK-- 68 (133)
T ss_dssp GGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TTCB--
T ss_pred HHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------cccC--
Confidence 3557888999999999999999999999999999995 35 79999999999987664311 1122
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|+++....
T Consensus 69 ----------v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 69 ----------AEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp ----------GGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred ----------HHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 344477788999999999999999999999999999989999999999999986654
No 65
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.58 E-value=4e-15 Score=141.74 Aligned_cols=116 Identities=15% Similarity=0.245 Sum_probs=102.5
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHH
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 363 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~-----~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l 363 (429)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++... ...++.++|
T Consensus 138 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~----------~~~~v~~im 207 (286)
T 2oux_A 138 TAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND----------DDTLIADIL 207 (286)
T ss_dssp BHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC----------TTSBHHHHS
T ss_pred HHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC----------CCCcHHHHc
Confidence 34555888999999999999999999987 889999999999999999999997531 146788876
Q ss_pred hcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 364 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++++|++++++.+|++.|.+++.+++|||| ++|+++|+||..||++++.
T Consensus 208 -------------~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 208 -------------NERVISVHVGDDQEDVAQTIRDYDFLAVPVTD-YDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp -------------BSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred -------------CCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 55789999999999999999999999999999 5899999999999998864
No 66
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.58 E-value=6.1e-15 Score=123.05 Aligned_cols=115 Identities=11% Similarity=0.182 Sum_probs=94.1
Q ss_pred ccCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 202 KAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 202 ~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++|. .+++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+.. ...++
T Consensus 9 diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~~Givt~~dl~~~~~~-----------~~~~v- 71 (129)
T 3jtf_A 9 DIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYE--DDRD---NIIGILLAKDLLRYMLE-----------PALDI- 71 (129)
T ss_dssp HHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEES--SSTT---CEEEEEEGGGGGGGGTC-----------TTSCG-
T ss_pred HhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCC---cEEEEEEHHHHHhHhcc-----------CCcCH-
Confidence 3566 6789999999999999999999999999996 2235 79999999999864321 01222
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
+++|. ++.++.+++++.+|+++|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 72 -----------~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 72 -----------RSLVR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp -----------GGGCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred -----------HHHhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 33354 4789999999999999999999999999998899999999999998654
No 67
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=6.3e-15 Score=123.25 Aligned_cols=119 Identities=12% Similarity=0.132 Sum_probs=96.9
Q ss_pred cCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccc
Q 014157 203 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 280 (429)
Q Consensus 203 ~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 280 (429)
+|. ++++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+.... .+...+++
T Consensus 7 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~--~~~~---~lvGivt~~dl~~~~~~~~-------~~~~~~v~- 73 (130)
T 3hf7_A 7 IMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYR--DSLD---DAISMLRVREAYRLMTEKK-------EFTKEIML- 73 (130)
T ss_dssp HSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEES--SSGG---GEEEEEEHHHHHHHHTSSS-------CCCHHHHH-
T ss_pred hCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEc--CCCC---cEEEEEEHHHHHHHHhccC-------ccchhhHH-
Confidence 454 4689999999999999999999999999995 2345 7999999999998765321 00112222
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 281 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 281 l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
++| +++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|+++.+..
T Consensus 74 -----------~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 74 -----------RAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp -----------HHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred -----------Hhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 335 467899999999999999999999999999999999999999999986643
No 68
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.58 E-value=1.4e-14 Score=119.75 Aligned_cols=118 Identities=16% Similarity=0.275 Sum_probs=99.1
Q ss_pred ccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccc
Q 014157 202 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 281 (429)
Q Consensus 202 ~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 281 (429)
++|.++++++.+++++.+|++.|.+++.+.+||+| ++ +++|++|.+|+++++..... ....+++++
T Consensus 5 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~-------~~~~~v~~~ 70 (125)
T 1pbj_A 5 DVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDD-------LAEVKVWEV 70 (125)
T ss_dssp HHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCC-------TTTSBHHHH
T ss_pred HhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCc-------ccccCHHHH
Confidence 35788999999999999999999999999999995 35 79999999999987664311 112233333
Q ss_pred cCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 282 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 282 ~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
|.+++.++.+++++.++++.|.+++.+++||+|+ |+++|++|.+|+++.+..
T Consensus 71 ------------m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 71 ------------MERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp ------------CBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred ------------cCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 7778999999999999999999999999999997 999999999999987644
No 69
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.57 E-value=1.8e-14 Score=124.97 Aligned_cols=127 Identities=18% Similarity=0.245 Sum_probs=102.2
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCC-CCcccCCcc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS-SLPILKLPI 278 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~-~~~~l~~~v 278 (429)
++++|.++++++.+++|+.+|+++|.+++++.+||+| +++ +++|++|..|+++++...+..... .......
T Consensus 7 v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd---~~~---~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~-- 78 (160)
T 2o16_A 7 VEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD---ANK---KLLGIVSQRDLLAAQESSLQRSAQGDSLAFET-- 78 (160)
T ss_dssp GGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHHHHHCC---------CCC--
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHHHHHhhcccccccchhccc--
Confidence 3557888999999999999999999999999999996 456 799999999999887654321100 0001112
Q ss_pred ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 279 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 279 ~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
.+.++|.++++++.+++++.+|++.|.+++.+++||+|+ |+++|+||..||++...
T Consensus 79 ----------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 79 ----------PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ----------BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHH
T ss_pred ----------CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 244457788999999999999999999999999999997 99999999999997654
No 70
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.57 E-value=6.7e-15 Score=139.60 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=100.2
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHh
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 364 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~-----~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~ 364 (429)
++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++... ...++.++|
T Consensus 137 v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~im- 205 (278)
T 2yvy_A 137 AGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAEIM- 205 (278)
T ss_dssp GGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----------TTCBSTTTS-
T ss_pred HHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----------CCCcHHHHh-
Confidence 4555888999999999999999999987 789999999899999999999997531 134566554
Q ss_pred cCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 365 LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+++++|++++++.+|++.|.+++.+.+|||| ++|+++|+||..||++.+.
T Consensus 206 ------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 206 ------------NPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp ------------BSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHC-
T ss_pred ------------CCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe-CCCeEEEEEEHHHHHHHHH
Confidence 56899999999999999999999999999999 5899999999999998864
No 71
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.57 E-value=4.5e-15 Score=125.10 Aligned_cols=118 Identities=8% Similarity=0.108 Sum_probs=95.6
Q ss_pred ccCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 202 KAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 202 ~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++|. ++++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+... .....+
T Consensus 7 ~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~---~~vGivt~~dl~~~~~~~--------~~~~~~-- 71 (136)
T 3lfr_A 7 DIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIG--ESHD---DVLGVLLAKDLLPLILKA--------DGDSDD-- 71 (136)
T ss_dssp HHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGGGSS--------SGGGCC--
T ss_pred hccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHHhc--------cCCCcC--
Confidence 3466 6789999999999999999999999999996 2225 799999999998754311 011122
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
++++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+.
T Consensus 72 ----------v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 72 ----------VKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp ----------GGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred ----------HHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 3344654 889999999999999999999999999999999999999999997543
No 72
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.57 E-value=1.8e-14 Score=121.20 Aligned_cols=120 Identities=17% Similarity=0.357 Sum_probs=99.3
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhH-HHHHHhhcccCCCCCcccCCcc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGI-LKCVCRYFRHCSSSLPILKLPI 278 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dI-l~~l~~~~~~~~~~~~~l~~~v 278 (429)
++++|.++++++.+++++.+|++.|.+++.+.+||+| +++ +++|++|..++ ++++.... ....++
T Consensus 10 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~--------~~~~~v 75 (138)
T 2p9m_A 10 VKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVID---DEN---KVIGIVTTTDIGYNLIRDKY--------TLETTI 75 (138)
T ss_dssp GGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEEC---TTC---BEEEEEEHHHHHHHHTTTCC--------CSSCBH
T ss_pred HHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEEC---CCC---eEEEEEEHHHHHHHHHhhcc--------cCCcCH
Confidence 3456888999999999999999999999999999996 346 79999999999 77554210 112233
Q ss_pred ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcC-----CCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 279 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQ-----VSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 279 ~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~-----~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
+ ++|.+++.++.+++++.++++.|.+++ .+++||+|++|+++|++|..|+++...
T Consensus 76 ~------------~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 76 G------------DVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp H------------HHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred H------------HHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 3 337778899999999999999999999 999999998999999999999997654
No 73
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.56 E-value=3.8e-14 Score=119.89 Aligned_cols=119 Identities=17% Similarity=0.268 Sum_probs=98.6
Q ss_pred CccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccc
Q 014157 201 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 280 (429)
Q Consensus 201 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 280 (429)
+++|.++++++.+++++.+|++.|.+++++.+||+|. +. ..+++|++|..|+++++.... ....+
T Consensus 8 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~--~~~~~Givt~~dl~~~~~~~~--------~~~~~--- 72 (141)
T 2rih_A 8 SELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR--DN--PKRPVAVVSERDILRAVAQRL--------DLDGP--- 72 (141)
T ss_dssp GGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET--TE--EEEEEEEEEHHHHHHHHHTTC--------CTTSB---
T ss_pred HHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC--CC--cceeEEEEEHHHHHHHHhcCC--------CCCCC---
Confidence 4578889999999999999999999999999999972 21 015999999999998765421 01223
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 281 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 281 l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
++++|.+++.++.++ ++.+|++.|.+++.+.+||+|++|+++|++|.+|+++..
T Consensus 73 ---------v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 73 ---------AMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp ---------SGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred ---------HHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 334477789999999 999999999999999999999899999999999998643
No 74
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.56 E-value=5.1e-15 Score=123.11 Aligned_cols=116 Identities=12% Similarity=0.150 Sum_probs=94.5
Q ss_pred ccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 202 KAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 202 ~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++|.+ +++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+... ....+++
T Consensus 7 diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~vGivt~~dl~~~~~~~---------~~~~~v~ 72 (127)
T 3nqr_A 7 DIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVIS--EDKD---HIEGILMAKDLLPFMRSD---------AEAFSMD 72 (127)
T ss_dssp HHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGGSTT---------CCCCCHH
T ss_pred HhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHhcc---------CCCCCHH
Confidence 34664 489999999999999999999999999996 2325 799999999998654321 0122333
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
+ +|. ++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|+++.+
T Consensus 73 ~------------~m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 73 K------------VLR-TAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp H------------HCB-CCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred H------------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 3 364 467899999999999999999999999999999999999999998754
No 75
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.56 E-value=1.3e-14 Score=124.88 Aligned_cols=118 Identities=10% Similarity=0.124 Sum_probs=100.0
Q ss_pred CccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEE-ecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCc
Q 014157 201 GKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPII-HSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 277 (429)
Q Consensus 201 g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVv-d~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~ 277 (429)
+++|.+ +++++.+++++.+|++.|.+++++++||+ +. +.+ +++|++|.+|+++.+.... ..+
T Consensus 23 ~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~--~~~---~lvGivt~~dl~~~~~~~~----------~~~ 87 (153)
T 3oco_A 23 SDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADN--DKD---KIIGYAYNYDIVRQARIDD----------KAK 87 (153)
T ss_dssp HHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETT--EEE---EEEEEEEHHHHHHHHHHHT----------TSB
T ss_pred eeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECC--CCC---cEEEEEEHHHHHhHHhcCC----------CCc
Confidence 345765 89999999999999999999999999999 41 235 7999999999998776431 122
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 278 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 278 v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
++++| +++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 88 ------------v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 88 ------------ISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ------------GGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred ------------HHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 33447 789999999999999999999999999999999999999999999987654
No 76
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.56 E-value=3.6e-14 Score=119.44 Aligned_cols=121 Identities=15% Similarity=0.300 Sum_probs=100.2
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++++|.++++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..|+++.+... . .....
T Consensus 9 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~--~-----~~~~~--- 72 (138)
T 2yzi_A 9 IKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIN---DDG---NVVGFFTKSDIIRRVIVP--G-----LPYDI--- 72 (138)
T ss_dssp GGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHTTTT--C-----CCTTS---
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHHHHhc--C-----CcccC---
Confidence 4557889999999999999999999999999999996 346 799999999997432211 0 01112
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
.+.++|.+++.++.+++++.+|++.|.+++++++ |+|++|+++|++|..|+++....
T Consensus 73 ---------~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 73 ---------PVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp ---------BGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred ---------CHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 2444577889999999999999999999999999 99988999999999999987655
No 77
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.56 E-value=2.7e-14 Score=123.64 Aligned_cols=121 Identities=16% Similarity=0.272 Sum_probs=99.3
Q ss_pred CCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 200 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 200 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
++++|.++ +++.+++++.+|++.|.+++++.+||+| +++ +++|++|..||++.+.... .....+
T Consensus 19 v~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~-------~~~~~~-- 82 (159)
T 3fv6_A 19 VKDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVD---RDA---VLVGVLSRKDLLRASIGQQ-------ELTSVP-- 82 (159)
T ss_dssp GGGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHHTSCS-------CTTTCB--
T ss_pred HHHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEc---CCC---cEEEEEeHHHHHHHhhccC-------cccCcC--
Confidence 34567774 5999999999999999999999999996 456 7999999999998764321 011222
Q ss_pred cccCcccccccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCC---cEEEEEeHHHHHHHHhc
Q 014157 280 AIPVGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDND---SLLDIYCRSDITALAKD 346 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g---~lvGivt~~Di~~~~~~ 346 (429)
++++|.+ +++++.+++++.+|++.|.+++++++||+|++| +++|+||..||++.+..
T Consensus 83 ----------v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 83 ----------VHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ----------GGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ----------HHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 3444766 789999999999999999999999999999888 99999999999986643
No 78
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=1.9e-14 Score=125.43 Aligned_cols=116 Identities=15% Similarity=0.275 Sum_probs=98.6
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcc
Q 014157 206 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 285 (429)
Q Consensus 206 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 285 (429)
++++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..||++.+...... ....+
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~~------~~~~~-------- 94 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTD---ADG---VVLGIFTERDLVKAVAGQGAA------SLQQS-------- 94 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHHHHHGGG------GGTSB--------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---eEEEEEEHHHHHHHHHhcCCc------cccCC--------
Confidence 4789999999999999999999999999996 456 799999999999888754211 11223
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 286 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 286 ~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
++++|.++++++.+++++.+|++.|.+++++++||+|+ |+++|+||..||++....
T Consensus 95 ----v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 95 ----VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ----GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred ----HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 34447778999999999999999999999999999998 999999999999987654
No 79
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.55 E-value=6e-15 Score=126.04 Aligned_cols=135 Identities=16% Similarity=0.270 Sum_probs=100.2
Q ss_pred CCccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCc
Q 014157 200 HGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 277 (429)
Q Consensus 200 ~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~ 277 (429)
++++|.+ +++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..|+++++...... ..+. .
T Consensus 7 v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~~~~-----~~~~-~ 74 (152)
T 4gqw_A 7 VGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVID---EDW---KLVGLVSDYDLLALDSGDSTW-----KTFN-A 74 (152)
T ss_dssp GGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEEC---TTC---BEEEEEEHHHHTTCC----CC-----HHHH-H
T ss_pred hhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEe---CCC---eEEEEEEHHHHHHhhcccCcc-----cchH-H
Confidence 3456777 899999999999999999999999999996 446 799999999998643211000 0000 0
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 278 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 278 v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
............+.++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+||++....
T Consensus 75 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 75 VQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp HHTC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHHHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 000000011123444577788999999999999999999999999999999999999999999987654
No 80
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.55 E-value=2e-14 Score=122.97 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=97.9
Q ss_pred cCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccc
Q 014157 203 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 280 (429)
Q Consensus 203 ~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 280 (429)
+|. .+++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..|+++++........ ....
T Consensus 20 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~~~--~~~~------ 85 (150)
T 3lqn_A 20 LMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLD---PMY---KLHGLISTAMILDGILGLERIEF--ERLE------ 85 (150)
T ss_dssp HSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHTBCSSSBCG--GGGG------
T ss_pred cccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEEC---CCC---CEEEEEEHHHHHHHHHhhcccch--hHHh------
Confidence 355 4689999999999999999999999999996 456 79999999999987643211000 0001
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 281 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 281 l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
...++++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|+||..|+++.+..
T Consensus 86 ------~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 86 ------EMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp ------GCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ------cCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 123455588889999999999999999999886 9999999999999999999987654
No 81
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.55 E-value=2.9e-14 Score=123.08 Aligned_cols=117 Identities=15% Similarity=0.171 Sum_probs=96.4
Q ss_pred cCCCCccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCccc
Q 014157 197 IDSHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPIL 274 (429)
Q Consensus 197 ~~~~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l 274 (429)
...++++|.+ +++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+... .
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~----------~ 101 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIG--EDKD---EVLGILHAKDLLKYMFNP----------E 101 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGSSCG----------G
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHHcC----------C
Confidence 4456778886 799999999999999999999999999996 2334 699999999998643211 1
Q ss_pred CCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHH
Q 014157 275 KLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT 341 (429)
Q Consensus 275 ~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~ 341 (429)
..++++ +|.+ +.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|++
T Consensus 102 ~~~v~~------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 102 QFHLKS------------ILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp GCCHHH------------HCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred cccHHH------------HcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 223333 3644 88999999999999999999999999999999999999999985
No 82
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.55 E-value=6.3e-14 Score=132.86 Aligned_cols=132 Identities=15% Similarity=0.248 Sum_probs=109.8
Q ss_pred HHHHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhc-----CCceeeEEecCCCCCCCCeEEEEEehhhHHH
Q 014157 184 SAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILK 258 (429)
Q Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~-----~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~ 258 (429)
.........+.++...+|++|.++++++.+++++.+|++.|.++ ++.++||+| +++ +++|++|.+|++.
T Consensus 121 ~~~~~i~~~l~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd---~~~---~lvGivt~~dll~ 194 (278)
T 2yvy_A 121 RTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVD---EKG---RLKGVLSLRDLIV 194 (278)
T ss_dssp HHHHHHHHHHHSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEEC---TTC---BEEEEEEHHHHHH
T ss_pred HHHHHHHHHHCCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEEC---CCC---CEEEEEEHHHHhc
Confidence 33344555566778889999999999999999999999999987 789999996 346 7999999999975
Q ss_pred HHHhhcccCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHH
Q 014157 259 CVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRS 338 (429)
Q Consensus 259 ~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~ 338 (429)
. .... .++++|.++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..
T Consensus 195 ~-------------~~~~------------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~ 249 (278)
T 2yvy_A 195 A-------------DPRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVD 249 (278)
T ss_dssp S-------------CTTC------------BSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHH
T ss_pred C-------------CCCC------------cHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHH
Confidence 2 0112 24455878899999999999999999999999999999999999999999
Q ss_pred HHHHHHhc
Q 014157 339 DITALAKD 346 (429)
Q Consensus 339 Di~~~~~~ 346 (429)
|++..+..
T Consensus 250 Dil~~i~~ 257 (278)
T 2yvy_A 250 DVLDVLEA 257 (278)
T ss_dssp HHHHHC--
T ss_pred HHHHHHHH
Confidence 99987654
No 83
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.55 E-value=3.1e-14 Score=121.79 Aligned_cols=117 Identities=16% Similarity=0.231 Sum_probs=98.2
Q ss_pred CCccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCc
Q 014157 200 HGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 277 (429)
Q Consensus 200 ~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~ 277 (429)
++++|.+ +++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..|+++.+.... .....+
T Consensus 30 v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~-------~~~~~~ 96 (149)
T 3k2v_A 30 VNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD---DDM---NIIGIFTDGDLRRVFDTGV-------DMRDAS 96 (149)
T ss_dssp GGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC---TTC---BEEEEEEHHHHHHHHCSSS-------CCTTCB
T ss_pred HHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC---CCC---cEEEEecHHHHHHHHhcCC-------CcccCc
Confidence 3457888 899999999999999999999999999996 456 7999999999998765321 112333
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH
Q 014157 278 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA 342 (429)
Q Consensus 278 v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~ 342 (429)
++++ |.+++.++.+++++.+|++.|.+++++.+||+|++ +++|+||..||++
T Consensus 97 v~~~------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 97 IADV------------MTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp HHHH------------SEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred HHHH------------cCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 3333 77788999999999999999999999999999965 9999999999863
No 84
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.54 E-value=9.4e-14 Score=122.17 Aligned_cols=122 Identities=7% Similarity=0.101 Sum_probs=101.0
Q ss_pred ccCCCCccCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcc
Q 014157 196 QIDSHGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPI 273 (429)
Q Consensus 196 ~~~~~g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~ 273 (429)
....++++|. ++++++.+++++.+|++.|.+++++++||++ .+.+ +++|++|.+|+++.+....
T Consensus 34 ~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~Dl~~~~~~~~--------- 99 (173)
T 3ocm_A 34 AERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCR--GSLD---EVVGIGRAKDLVADLITEG--------- 99 (173)
T ss_dssp TTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEES--SSTT---SEEEEEEHHHHHHHHHHHS---------
T ss_pred CCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---CEEEEEEHHHHHHHHhcCC---------
Confidence 3445677886 4789999999999999999999999999996 2335 7999999999998765421
Q ss_pred cCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 274 LKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 274 l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
..+++ |.++++++.+++++.+|+++|.+++.+.+||+|++|+++|+||..||+..+..
T Consensus 100 -~~~v~--------------~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 100 -RVRRN--------------RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp -SCCGG--------------GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred -cchhH--------------hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 11222 12467899999999999999999999999999999999999999999987764
No 85
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.54 E-value=5.3e-14 Score=119.07 Aligned_cols=119 Identities=20% Similarity=0.231 Sum_probs=96.5
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 282 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 282 (429)
+|.++++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..|+++++..... .....+++++
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~------~~~~~~v~~~- 82 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID---ENG---YLINVYEAYDVLGLIKGGIY------NDLSLSVGEA- 82 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHHHTC----------CCSBHHHH-
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc---CCC---cEEEEEcHHHHHHHhccccc------ccCCccHHHH-
Confidence 5778999999999999999999999999999996 346 79999999999987653210 0112333333
Q ss_pred CcccccccCCCCCC------CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 283 VGTWVPKIGEPNRR------PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 283 i~~~~~~v~~~~~~------~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
|.+ ++.++.+++++.+|++.|.+++.+++||+|++|+++|+||.+|+++.+.
T Consensus 83 -----------m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 83 -----------LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -----------HHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -----------HhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 332 5789999999999999999999999999998899999999999998654
No 86
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.53 E-value=9.4e-14 Score=119.16 Aligned_cols=121 Identities=17% Similarity=0.218 Sum_probs=95.9
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcc
Q 014157 206 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 285 (429)
Q Consensus 206 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 285 (429)
++++++.+++++.+|++.|.+++++.+||+| ++| +++|++|..|+++.+..... .....++.++
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd---~~~---~~vGivt~~dl~~~~~~~~~------~~~~~~v~~~---- 92 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVD---EKG---RVVDIYSKFDVINLAAEKTY------NNLDVSVTKA---- 92 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEEC---TTS---BEEEEEEHHHHHHHHHCSSC------CCTTSBGGGG----
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEEC---CCC---cEEEEEeHHHHHHHhcchhh------hhhcchHHHH----
Confidence 6788999999999999999999999999996 346 79999999999987653210 0112233332
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 286 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 286 ~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
+. ..+.|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+||..||++.+
T Consensus 93 -m~-~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 93 -LQ-HRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp -GG-TCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred -Hh-hhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 10 0001126789999999999999999999999999999889999999999998765
No 87
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.53 E-value=5.3e-14 Score=124.81 Aligned_cols=121 Identities=14% Similarity=0.176 Sum_probs=100.8
Q ss_pred CccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccc
Q 014157 201 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 280 (429)
Q Consensus 201 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 280 (429)
+++|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|.+||++++..... .....
T Consensus 12 ~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd---~~g---~~vGivt~~dl~~~~~~~~~------~~~~~---- 75 (184)
T 1pvm_A 12 EKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKD---DNG---NDVGLLSERSIIKRFIPRNK------KPDEV---- 75 (184)
T ss_dssp GGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEEC---TTS---CEEEEEEHHHHHHHTGGGCC------CGGGS----
T ss_pred HHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHHHhhccc------CcccC----
Confidence 456889999999999999999999999999999996 346 79999999999986543200 00111
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 281 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 281 l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
.++++|.+++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||..||++...
T Consensus 76 --------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 76 --------PIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp --------BGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred --------CHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 344557788999999999999999999999999999998899999999999986543
No 88
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.53 E-value=1.2e-13 Score=119.07 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=101.3
Q ss_pred CccCCCCceecCCCCcHHHHHHHHHhcCCce-eeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccc
Q 014157 201 GKAFPRPLVYAGPNDNLKDVARKILHNEVAT-VPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 279 (429)
Q Consensus 201 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~-lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~ 279 (429)
+++|.++++++.+++++.+|++.|.+++++. +||+|. + +++|++|..|+++++...+.........+....
T Consensus 19 ~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~- 90 (157)
T 1o50_A 19 CKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSM- 90 (157)
T ss_dssp TTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC-------CC-
T ss_pred hhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHH-
Confidence 4578999999999999999999999999999 999962 2 599999999999876532100000000000000
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 280 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 280 ~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
.......++++|.+ ++++.+++++.+|++.|.+++++++||+|++|+++|+||..||++....
T Consensus 91 ---~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 91 ---KRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp ---CCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred ---HHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 00111234555888 9999999999999999999999999999988999999999999986654
No 89
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.53 E-value=8.5e-14 Score=129.32 Aligned_cols=210 Identities=12% Similarity=0.164 Sum_probs=127.4
Q ss_pred ccccccCCCCccEEEEcCCCCHHHHHHHHHHcCCcEeeeeccCCCeeeEeeeHHHHHHHHHHHhcCCCCCChhhhhhhhH
Q 014157 104 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTI 183 (429)
Q Consensus 104 ~~~~d~~p~s~~vv~l~~~~~v~~A~~~m~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l~~~~i 183 (429)
.++.|+|- .++++++++.++.+|++.|.++++.++||+|.+ ++++|++|..|+++.+..... .. .......+.
T Consensus 7 ~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~--~~--~~~~~~~~~ 79 (245)
T 3l2b_A 7 LKVEDLEM--DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWD--SN--ILAKSATSL 79 (245)
T ss_dssp CBGGGSCC--BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCC--TT--HHHHTTCCH
T ss_pred CcHHHhcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhh--hh--hhhhccCCH
Confidence 45667773 468899999999999999999999999999964 789999999999987742111 00 000111112
Q ss_pred HHHHHhhhhh-hcccC-----------------CC-CccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCC--
Q 014157 184 SAWKEGKAYL-NRQID-----------------SH-GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDG-- 242 (429)
Q Consensus 184 ~~~~~~~~~~-~~~~~-----------------~~-g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~-- 242 (429)
..+.+..... -.... .. .......++.+. .-.++...+.+.++..+++........
T Consensus 80 ~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvg---dr~~~~~~~i~~~~~~liit~~~~~~~~v 156 (245)
T 3l2b_A 80 DNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAG---DRAEIQAELIELKVSLLIVTGGHTPSKEI 156 (245)
T ss_dssp HHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEEC---SCHHHHHHHHHTTCSEEEECTTCCCCHHH
T ss_pred HHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEEC---CCHHHHHHHHHcCCCEEEECCCCCCCHHH
Confidence 2221111000 00000 00 001122333331 237888899999999888874211000
Q ss_pred ----CCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcccccccCCCCC-CCceeecCCCCHHHHHHHHHhc
Q 014157 243 ----SFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR-RPLAMLRPSASLSAALNLLVQA 317 (429)
Q Consensus 243 ----~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~-~~~~~v~~~~sl~~a~~~m~~~ 317 (429)
....+-.+.|..|......... ... .++++|. +++.++.+++++.+|+++|.++
T Consensus 157 ~~~a~~~~~~~i~t~~d~~~~~~~~~---------~~~------------~v~~im~~~~~~~~~~~~~~~~~~~~m~~~ 215 (245)
T 3l2b_A 157 IELAKKNNITVITTPHDSFTASRLIV---------QSL------------PVDYVMTKDNLVAVSTDDLVEDVKVTMSET 215 (245)
T ss_dssp HHHHHHHTCEEEECSSCHHHHHHHGG---------GGS------------BHHHHSBCTTCCCEETTSBHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEeCCChHHHHHHHh---------cCC------------ceeeEecCCccEEECCCCcHHHHHHHHHhc
Confidence 0001334444444433221110 112 2444587 7899999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 318 QVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 318 ~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
+++++||+|++|+++|++|.+|+++..
T Consensus 216 ~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 216 RYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp CCSEEEEECTTCBEEEEEECC------
T ss_pred CCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 999999999999999999999998754
No 90
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.52 E-value=5.9e-14 Score=117.73 Aligned_cols=115 Identities=16% Similarity=0.325 Sum_probs=96.0
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcc
Q 014157 206 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 285 (429)
Q Consensus 206 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 285 (429)
++++++.+++++.+|++.|.+++.+.+||+| ++ +++|++|..|+++.+..... .....
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~~~~~--------- 74 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------PVKDT--------- 74 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------CGGGS---------
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------CcccC---------
Confidence 7899999999999999999999999999995 35 79999999999864432100 01112
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 286 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 286 ~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
.++++|.+++.++.+++++.+|++.|.+++++++||+| +|+++|++|.+|+++....
T Consensus 75 ---~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 75 ---QVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ---BGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ---CHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 34455778899999999999999999999999999999 7999999999999986644
No 91
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.52 E-value=6.1e-14 Score=133.52 Aligned_cols=127 Identities=16% Similarity=0.208 Sum_probs=107.5
Q ss_pred hhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhc-----CCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhh
Q 014157 189 GKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRY 263 (429)
Q Consensus 189 ~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~-----~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~ 263 (429)
+...+.++...+|++|.++++++.+++++.+|++.|.++ +++++||+| +++ +++|++|.+|++..
T Consensus 128 i~~ll~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd---~~~---~lvGivt~~dll~~---- 197 (286)
T 2oux_A 128 IKELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVD---QEN---HLVGVISLRDLIVN---- 197 (286)
T ss_dssp HHHHTTSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEEC---TTC---BEEEEEEHHHHTTS----
T ss_pred HHHHhcCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEc---CCC---eEEEEEEHHHHHcC----
Confidence 334456777888999999999999999999999999998 788999996 346 79999999999742
Q ss_pred cccCCCCCcccCCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHH
Q 014157 264 FRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITAL 343 (429)
Q Consensus 264 ~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~ 343 (429)
....+++ ++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||..|++..
T Consensus 198 ---------~~~~~v~------------~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~ 256 (286)
T 2oux_A 198 ---------DDDTLIA------------DILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDV 256 (286)
T ss_dssp ---------CTTSBHH------------HHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred ---------CCCCcHH------------HHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 0122333 3477789999999999999999999999999999999999999999999987
Q ss_pred Hhc
Q 014157 344 AKD 346 (429)
Q Consensus 344 ~~~ 346 (429)
+..
T Consensus 257 i~~ 259 (286)
T 2oux_A 257 IDD 259 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 92
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.52 E-value=4.3e-14 Score=121.72 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=98.9
Q ss_pred CccCC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcc
Q 014157 201 GKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 278 (429)
Q Consensus 201 g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v 278 (429)
+++|. ++++++.+++++.+|++.|.+++++++||+| ++| +++|++|..|+++++....... ......+
T Consensus 18 ~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---~~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~~~- 87 (156)
T 3ctu_A 18 ETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT---DEK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTD- 87 (156)
T ss_dssp GGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEEC---C-C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSB-
T ss_pred HHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEEC---CCC---EEEEEEcHHHHHHHHHhccccc---cccccCc-
Confidence 34566 6899999999999999999999999999996 456 7999999999998876531100 0011222
Q ss_pred ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 279 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 279 ~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
++++|.+++.++.+++++.+|++.|.+++ ++||+|++|+++|+||.+|+++....
T Consensus 88 -----------v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 88 -----------IVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -----------GGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred -----------HHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 34447778999999999999999998876 79999999999999999999987654
No 93
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.51 E-value=1.5e-14 Score=120.97 Aligned_cols=116 Identities=19% Similarity=0.318 Sum_probs=95.8
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHH-HHHhhcccCCCCCcccCCccccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRYFRHCSSSLPILKLPICAI 281 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~-~l~~~~~~~~~~~~~l~~~v~~l 281 (429)
+|.++++++.+++++.+|++.|.+++.+.+||+| +++ +++|++|.+|+++ ++.... .....+
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~-------~~~~~~---- 75 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICG---DDD---RLHGMLTDRDIVIKGLAAGL-------DPNTAT---- 75 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEEC---GGG---BEEEEEEHHHHHHTTGGGTC-------CTTTSB----
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEEC---CCC---eEEEEEeHHHHHHHHHhcCC-------CccccC----
Confidence 4777899999999999999999999999999996 345 7999999999984 433211 011223
Q ss_pred cCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 282 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 282 ~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
++++|.+++.++.+++++.+|++.|.+++.+++||+|+ |+++|++|.+|+++..
T Consensus 76 --------v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 76 --------AGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp --------HHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred --------HHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 33347778999999999999999999999999999997 9999999999998754
No 94
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.51 E-value=1.2e-13 Score=118.88 Aligned_cols=125 Identities=15% Similarity=0.217 Sum_probs=99.8
Q ss_pred CCccCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCc
Q 014157 200 HGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 277 (429)
Q Consensus 200 ~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~ 277 (429)
++++|.+ +++++.+++++.+|++.|.+++++++||+| +++ +++|++|..|+++++...... ......
T Consensus 13 v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~--~~~~~~--- 81 (157)
T 2emq_A 13 VKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLD---TSY---KLHGLISMTMMMDAILGLERI--EFERLE--- 81 (157)
T ss_dssp STTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEEC---TTC---CEEEEEEHHHHHHHSBCSSSB--CGGGGG---
T ss_pred HHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEc---CCC---CEEEEeeHHHHHHHHhccccc--chHHhc---
Confidence 4556776 899999999999999999999999999996 346 799999999998765421000 000001
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 278 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 278 v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
...+.++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|+++....
T Consensus 82 ---------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 82 ---------TMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp ---------TCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred ---------CCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 123455588889999999999999999999887 9999988999999999999987654
No 95
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.51 E-value=2e-13 Score=126.86 Aligned_cols=143 Identities=11% Similarity=0.136 Sum_probs=104.5
Q ss_pred CCCccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCC---------
Q 014157 199 SHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS--------- 269 (429)
Q Consensus 199 ~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~--------- 269 (429)
.++++|+++++++.+++++.+|+++|.+++++.+||++. .+++ +++|+||..||++.+.........
T Consensus 14 ~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~ 89 (250)
T 2d4z_A 14 QVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEAD 89 (250)
T ss_dssp BTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBC
T ss_pred ChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccc
Confidence 356789999999999999999999999999999999962 2235 799999999999887654211100
Q ss_pred ------------------CCcccCCcc----------------c----------------------------------c-
Q 014157 270 ------------------SLPILKLPI----------------C----------------------------------A- 280 (429)
Q Consensus 270 ------------------~~~~l~~~v----------------~----------------------------------~- 280 (429)
...++.... . .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (250)
T 2d4z_A 90 EEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEE 169 (250)
T ss_dssp CC---------------------------------------------------------------------------CCS
T ss_pred ccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccccc
Confidence 000000000 0 0
Q ss_pred -cc---Cccc-----cccc--C-CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 281 -IP---VGTW-----VPKI--G-EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 281 -l~---i~~~-----~~~v--~-~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
+. ...| ...+ . ..|.+.++++.+++++.++..+|...|++++||++ .|+++|+||++||++++..
T Consensus 170 ~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 170 MLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp CCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 00 0000 1112 1 25788899999999999999999999999999997 7999999999999987764
No 96
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.50 E-value=2.3e-13 Score=138.34 Aligned_cols=166 Identities=14% Similarity=0.203 Sum_probs=126.4
Q ss_pred eeEeeeHHHHHHHHHHHhcCCCCCChhhhhhhhHHHHHHhhhhhhcccCCCCccCCCCceecCCCCcHHHHHHHHHhc--
Q 014157 150 FVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-- 227 (429)
Q Consensus 150 ~vGilt~~Dii~il~~~~~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~-- 227 (429)
++.-++..|+.+++..+.........+-+......+.......+.|+...+|++|.++++++++++++.+|++.|.++
T Consensus 107 ~l~~l~~dd~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~ 186 (473)
T 2zy9_A 107 ILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAP 186 (473)
T ss_dssp HHHHSCHHHHHHHHHHHHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGG
T ss_pred HHHhCCHHHHHHHHHhCCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccC
Confidence 334466677777776554321001112223334444455566677888899999999999999999999999999986
Q ss_pred ---CCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcccccccCCCCCCCceeecCC
Q 014157 228 ---EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPS 304 (429)
Q Consensus 228 ---~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~~~~~~~~~~v~~~ 304 (429)
++.++||+| +++ +++|++|.+|++.. ..+.+ ++++|.+++++++++
T Consensus 187 ~~~~~~~ipVvd---~~~---~lvGiVt~~Dll~~-------------~~~~~------------v~dim~~~~~~v~~~ 235 (473)
T 2zy9_A 187 DAETIYYIYVVD---EKG---RLKGVLSLRDLIVA-------------DPRTR------------VAEIMNPKVVYVRTD 235 (473)
T ss_dssp GCSEEEEEEEEC---TTS---BEEEEEEHHHHHHS-------------CTTSB------------GGGTSBSSCCCEESS
T ss_pred CcCceeEEEEEC---CCC---cEEEEEEHHHHhcC-------------CCCCc------------HHHHhCCCCeEEeCC
Confidence 589999996 345 79999999999751 01223 344487889999999
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 305 ASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 305 ~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
+++.++++.|.+++.+.+||+|++|+++|+||.+|+++....
T Consensus 236 ~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 236 TDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 999999999999999999999999999999999999986644
No 97
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.50 E-value=7e-14 Score=120.51 Aligned_cols=116 Identities=14% Similarity=0.222 Sum_probs=97.4
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccCcc
Q 014157 206 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 285 (429)
Q Consensus 206 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 285 (429)
++++++.+++++.+|++.|.+++++.+||. +++ +++|++|..|+++++...... ....+++
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~----~~~---~~~Givt~~dl~~~~~~~~~~------~~~~~v~------ 81 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVV----DGD---DIAGIVTERDYARKVVLQERS------SKATRVE------ 81 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEE----SSS---SEEEEEEHHHHHHHSGGGTCC------SSSCBHH------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEe----eCC---EEEEEEEHHHHHHHHHhccCC------ccccCHH------
Confidence 678999999999999999999999999996 345 799999999999876543211 1123333
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 014157 286 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 347 (429)
Q Consensus 286 ~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~ 347 (429)
++|.+++.++.+++++.+|+++|.+++++++||+| +|+++|+||.+||++.....
T Consensus 82 ------~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 82 ------EIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp ------HHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred ------HHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 34777899999999999999999999999999999 79999999999999877653
No 98
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.50 E-value=6.4e-14 Score=144.58 Aligned_cols=121 Identities=19% Similarity=0.255 Sum_probs=103.8
Q ss_pred cccCCCCCCCceeecCC-CCHHHHHHHHHhcCCCEEEEEC-CCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 014157 288 PKIGEPNRRPLAMLRPS-ASLSAALNLLVQAQVSSIPIVD-DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 365 (429)
Q Consensus 288 ~~v~~~~~~~~~~v~~~-~sl~~a~~~m~~~~~~~lpVvd-~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~ 365 (429)
.+++++|.++++++.++ +++.+|+++|.+++++++||+| ++++++|+||.+||++....+.. ..+.++.++|
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~----~~~~~V~~im-- 457 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR----QQSDPAIKAL-- 457 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC----CTTSBGGGGE--
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC----cCCCcHHHHh--
Confidence 35778899999999999 9999999999999999999999 78999999999999976544211 2245777765
Q ss_pred CCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCC----CeEEEEEeHHHHHHHhh
Q 014157 366 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGS----KRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~----g~l~GiIs~~Dil~~l~ 428 (429)
.++++++.+++++.+++++|.++++ +|||| ++ |+++||||+.||++++.
T Consensus 458 -----------~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd-~~~~~~g~lvGIVT~~Dll~~l~ 510 (527)
T 3pc3_A 458 -----------NKRVIRLNESEILGKLARVLEVDPS--VLILG-KNPAGKVELKALATKLDVTTFIA 510 (527)
T ss_dssp -----------ETTCCEEETTSBHHHHHHHHTTCSE--EEEEE-ECSSSCEEEEEEEEHHHHHHHHH
T ss_pred -----------cCCCeEECCCCcHHHHHHHHhhCCE--EEEEe-CCcccCCeEEEEEEHHHHHHHHH
Confidence 5689999999999999999987775 79999 43 89999999999999985
No 99
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.50 E-value=6.7e-14 Score=123.18 Aligned_cols=138 Identities=19% Similarity=0.277 Sum_probs=99.0
Q ss_pred cCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccC--CCCCcccCCcc
Q 014157 203 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHC--SSSLPILKLPI 278 (429)
Q Consensus 203 ~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~--~~~~~~l~~~v 278 (429)
+|.+ +++++.+++++.+|+++|.+++++.+||+| +++ +++|++|.+||+++........ ....+......
T Consensus 9 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 9 FMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVID---DNW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp HSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHTCC-------------------CC
T ss_pred hcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---eEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4666 799999999999999999999999999996 456 8999999999985332110000 00000000000
Q ss_pred ------ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 279 ------CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 279 ------~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
..+........++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+||++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 00000111223556688889999999999999999999999999999999999999999999986643
No 100
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=119.72 Aligned_cols=125 Identities=13% Similarity=0.160 Sum_probs=97.1
Q ss_pred ccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccc
Q 014157 202 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 281 (429)
Q Consensus 202 ~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 281 (429)
++|.++++++.+++++.+|++.|.+++++.+||+|. .+++ +++|++|..|+++++....... ......++.++
T Consensus 17 dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~-~~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~~v~~~ 89 (164)
T 2pfi_A 17 HFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES-TESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQCLQDI 89 (164)
T ss_dssp HHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHC----------CCCCBHHHH
T ss_pred HHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec-CCCC---EEEEEEEHHHHHHHHHhhcccc---CCcccchhhhh
Confidence 357889999999999999999999999999999961 1256 8999999999998775421110 00111223322
Q ss_pred cCcccccccCCCCCCC------ceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 282 PVGTWVPKIGEPNRRP------LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 282 ~i~~~~~~v~~~~~~~------~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
|.+. +.++.+++++.+|++.|.+++.+++||+| +|+++|+||.+||++....
T Consensus 90 ------------m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 90 ------------LARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp ------------HHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ------------hcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 3333 78999999999999999999999999999 7999999999999986643
No 101
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.48 E-value=7.4e-14 Score=120.71 Aligned_cols=122 Identities=9% Similarity=0.146 Sum_probs=97.1
Q ss_pred cCCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccc
Q 014157 203 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 280 (429)
Q Consensus 203 ~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 280 (429)
+|.+ +++++.+++++.+|++.|.+++++.+||+| +++ +++|++|..|+++++...... ........+
T Consensus 19 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~---~lvGivt~~dl~~~~~~~~~~--~~~~~~~~~--- 87 (159)
T 1yav_A 19 FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLD---PSY---RLHGLIGTNMIMNSIFGLERI--EFEKLDQIT--- 87 (159)
T ss_dssp HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEEC---TTC---BEEEEEEHHHHHHHHBCSSSB--CGGGTTTSB---
T ss_pred HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEEC---CCC---CEEEEeEHHHHHHHhhhhccc--chhhhccCC---
Confidence 4666 789999999999999999999999999996 456 799999999999876432100 000011222
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 281 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 281 l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
+.++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|+++....
T Consensus 88 ---------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 88 ---------VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp ---------HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ---------HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 344477789999999999999999998876 9999989999999999999986654
No 102
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.47 E-value=2.8e-13 Score=119.79 Aligned_cols=139 Identities=10% Similarity=0.110 Sum_probs=101.5
Q ss_pred cCCCC----ceec--CCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCC----c
Q 014157 203 AFPRP----LVYA--GPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSL----P 272 (429)
Q Consensus 203 ~~~~~----~i~v--~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~----~ 272 (429)
+|.+. ++++ .+++++.+|++.|.+++++.+||++. .+++ +++|++|..|+++.+........... .
T Consensus 16 im~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~ 91 (185)
T 2j9l_A 16 VMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSII 91 (185)
T ss_dssp HSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEE
T ss_pred HhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCcccccee
Confidence 45555 7888 99999999999999999999999931 1456 89999999999998765321100000 0
Q ss_pred ccCCcccccc-CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 273 ILKLPICAIP-VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 273 ~l~~~v~~l~-i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
.+.....+.. .......++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|+||.+||++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 92 YFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp ECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 0000000000 00112245666878899999999999999999999999999999 8999999999999986654
No 103
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.45 E-value=1.7e-13 Score=139.27 Aligned_cols=116 Identities=17% Similarity=0.281 Sum_probs=101.7
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHH
Q 014157 289 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 363 (429)
Q Consensus 289 ~v~~~~~~~~~~v~~~~sl~~a~~~m~~~-----~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l 363 (429)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++++++|++|.+|++... .+.+++++|
T Consensus 156 ~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~----------~~~~v~dim 225 (473)
T 2zy9_A 156 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAEIM 225 (473)
T ss_dssp BSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSC----------TTSBGGGTS
T ss_pred CHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCC----------CCCcHHHHh
Confidence 35666888999999999999999999986 579999999899999999999997521 135677765
Q ss_pred hcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 364 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.++++++++++++.+|++.|.+++.+.+|||| ++|+++|+||..|+++.+.
T Consensus 226 -------------~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD-e~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 226 -------------NPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp -------------BSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -------------CCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc-CCCEEEEEEehHhhHHHHH
Confidence 56899999999999999999999999999999 5899999999999998764
No 104
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.45 E-value=5.1e-14 Score=110.86 Aligned_cols=46 Identities=35% Similarity=0.672 Sum_probs=43.2
Q ss_pred cccCCceeEEEEEECCeeeecCCCCcccCCCCCcceEEEecCCCCC
Q 014157 2 FFYIVHYVQYKFCVDGEWRHDEHQPFISSEYGIVNTVLLATEPNFM 47 (429)
Q Consensus 2 ~~l~~g~~~ykf~vdg~w~~~~~~~~~~~~~g~~~n~~~~~~~~~~ 47 (429)
+.||+|.|+|||+|||+|++||..|++.|+.|+.||+|.|.++|++
T Consensus 49 v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~~Nnvi~V~~~d~~ 94 (96)
T 1z0n_A 49 LDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFE 94 (96)
T ss_dssp EEECSEEEEEEEEETTEEECCTTSCEEECTTSCEEEEEEECSCTTE
T ss_pred EEccCCCEEEEEEECCeEEcCCCCCeEECCCCCEeEEEEEcCCCcC
Confidence 4799999999999999999999999999999999999999987754
No 105
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.41 E-value=8.5e-14 Score=146.48 Aligned_cols=137 Identities=14% Similarity=0.050 Sum_probs=101.9
Q ss_pred ccCCCCC--CCceeecCCCCHHHHHHHHH-hcCCCEEEEECCCCcEEEEEeHHHHHHHHhccccccc-c---------cc
Q 014157 289 KIGEPNR--RPLAMLRPSASLSAALNLLV-QAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHI-N---------LS 355 (429)
Q Consensus 289 ~v~~~~~--~~~~~v~~~~sl~~a~~~m~-~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l-~---------l~ 355 (429)
+++++|. +++.++++++++.++.+.|. +++++++||+|++++++|+||++|+.+.......... . ..
T Consensus 454 ~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~ 533 (632)
T 3org_A 454 TAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLD 533 (632)
T ss_dssp BHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC------------------
T ss_pred cHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccC
Confidence 5777888 88999999999999999999 7999999999999999999999999875543210000 0 00
Q ss_pred c----ccHHHHHhcC----------------CCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEE
Q 014157 356 E----MTIHQALQLG----------------QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVE 415 (429)
Q Consensus 356 ~----~~v~~~l~~~----------------~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~ 415 (429)
. ..+....... .......++|+++++++++++++.+|++.|.+++++++||+| +|+++
T Consensus 534 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--~G~lv 611 (632)
T 3org_A 534 AADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--RGKLV 611 (632)
T ss_dssp -------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--TTEEE
T ss_pred HHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--CCEEE
Confidence 0 0011110000 000113457899999999999999999999999999999996 79999
Q ss_pred EEEeHHHHHHHh
Q 014157 416 GIVSLSDIFKFL 427 (429)
Q Consensus 416 GiIs~~Dil~~l 427 (429)
|+||++||++++
T Consensus 612 GIVT~~Dll~~~ 623 (632)
T 3org_A 612 GIVEREDVAYGY 623 (632)
T ss_dssp EEEEGGGTEECC
T ss_pred EEEehhhHHHHH
Confidence 999999998765
No 106
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.41 E-value=6.9e-13 Score=135.67 Aligned_cols=113 Identities=18% Similarity=0.292 Sum_probs=100.4
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC--CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 014157 292 EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD--NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 369 (429)
Q Consensus 292 ~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~--~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~ 369 (429)
+.|..+++++.+++++.+++++|.+++++++||+|+ +++++|+||.+|+.. .. ..+.++.++|
T Consensus 117 ~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~---~~------~~~~~V~~vM------ 181 (511)
T 3usb_A 117 SGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF---IQ------DYSIKISDVM------ 181 (511)
T ss_dssp SCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT---CC------CSSSBHHHHC------
T ss_pred cccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh---hc------cCCCcHHHhc------
Confidence 336678899999999999999999999999999998 899999999999964 11 1256888877
Q ss_pred CCcccccCC-CceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 014157 370 YSPYELRSQ-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 427 (429)
Q Consensus 370 ~~~~~~~~~-~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l 427 (429)
.+ +++++++++++.++++.|.+++++.+|||| ++|+++|+||..||++.+
T Consensus 182 -------~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD-e~g~l~GiIT~~Dil~~~ 232 (511)
T 3usb_A 182 -------TKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD-NNGVLQGLITIKDIEKVI 232 (511)
T ss_dssp -------CCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHH
T ss_pred -------ccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe-CCCCEeeeccHHHHHHhh
Confidence 44 789999999999999999999999999999 599999999999999876
No 107
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.35 E-value=4.2e-13 Score=123.83 Aligned_cols=46 Identities=17% Similarity=0.285 Sum_probs=40.9
Q ss_pred cccCCceeEEEEEECCeeeecCCCCcccCCCCCcceEEEecCCCCC
Q 014157 2 FFYIVHYVQYKFCVDGEWRHDEHQPFISSEYGIVNTVLLATEPNFM 47 (429)
Q Consensus 2 ~~l~~g~~~ykf~vdg~w~~~~~~~~~~~~~g~~~n~~~~~~~~~~ 47 (429)
++||||.|||||+|||+|++||++|++.|+.|++||+|.|.++|..
T Consensus 46 v~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nNvi~V~~~~~~ 91 (252)
T 2qlv_B 46 LRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVNYIEVRQPEKN 91 (252)
T ss_dssp EEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEEEEEECC----
T ss_pred EECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcceeeccCcccc
Confidence 5899999999999999999999999999999999999999976544
No 108
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.34 E-value=3.4e-12 Score=130.63 Aligned_cols=114 Identities=21% Similarity=0.333 Sum_probs=99.6
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEEC--CCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 014157 292 EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVD--DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 369 (429)
Q Consensus 292 ~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd--~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~ 369 (429)
++|.++++++.+++++.++++.|.+++++++||+| ++++++|+||.+|++.... .+.++.++|
T Consensus 94 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~---------~~~~v~~im------ 158 (491)
T 1zfj_A 94 NGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISD---------YNAPISEHM------ 158 (491)
T ss_dssp TTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSC---------SSSBTTTSC------
T ss_pred hcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhcc---------CCCcHHHHc------
Confidence 44777899999999999999999999999999999 7899999999999985310 134566544
Q ss_pred CCcccccCC-CceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 370 YSPYELRSQ-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 370 ~~~~~~~~~-~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+ +++++++++++.++++.|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 159 -------~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd-~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 159 -------TSEHLVTAAVGTDLETAERILHEHRIEKLPLVD-NSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp -------CCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -------CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEEHHHHHHHHh
Confidence 55 788999999999999999999999999999 5899999999999998864
No 109
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.33 E-value=2.1e-11 Score=124.71 Aligned_cols=158 Identities=14% Similarity=0.177 Sum_probs=116.6
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 282 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 282 (429)
.|..+++++.+++|+.+|+++|.+++++++||++.. .++ +++|++|.+|++. . .....+++++
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~------~------~~~~~~V~~v- 180 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF------I------QDYSIKISDV- 180 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT------C------CCSSSBHHHH-
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh------h------ccCCCcHHHh-
Confidence 477889999999999999999999999999999621 145 8999999999953 0 1123344444
Q ss_pred CcccccccCCCCCC-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 014157 283 VGTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQ 361 (429)
Q Consensus 283 i~~~~~~v~~~~~~-~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~ 361 (429)
|.+ +++++++++++.+++++|.+++++.+||+|++|+++|+||.+|+++....... +.+
T Consensus 181 -----------M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a---------~~D 240 (511)
T 3usb_A 181 -----------MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNS---------AKD 240 (511)
T ss_dssp -----------CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTC---------CBC
T ss_pred -----------cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccc---------hhh
Confidence 776 89999999999999999999999999999999999999999999987654111 111
Q ss_pred HHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEe
Q 014157 362 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 408 (429)
Q Consensus 362 ~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd 408 (429)
.... ..-...+.......+.++.|.+.++..++|-.
T Consensus 241 ~~~r-----------l~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 241 KQGR-----------LLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp TTSC-----------BCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred hccc-----------eeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 1100 00122333344445566777888888776654
No 110
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.32 E-value=1.1e-12 Score=124.80 Aligned_cols=42 Identities=31% Similarity=0.574 Sum_probs=39.6
Q ss_pred cccCCceeEEEEEECCeeeecCCCCcc-cCCCCCcceEEEecC
Q 014157 2 FFYIVHYVQYKFCVDGEWRHDEHQPFI-SSEYGIVNTVLLATE 43 (429)
Q Consensus 2 ~~l~~g~~~ykf~vdg~w~~~~~~~~~-~~~~g~~~n~~~~~~ 43 (429)
++||||.|||||+|||+|++||+.|.. .|+.|++||+|.|.+
T Consensus 212 ~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~nn~~~v~~ 254 (294)
T 3nme_A 212 RELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTNNYAKVVD 254 (294)
T ss_dssp EEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCEEEEEECC
T ss_pred EECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEeEEEEECC
Confidence 689999999999999999999999976 799999999999984
No 111
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.31 E-value=3.2e-13 Score=137.59 Aligned_cols=115 Identities=16% Similarity=0.276 Sum_probs=86.2
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCC
Q 014157 292 EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYS 371 (429)
Q Consensus 292 ~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~ 371 (429)
+.|..+++++.+++++.+++++|.+++++++||+|++++++|+||.+|+... . ..+.++.++|..
T Consensus 93 ~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---~------~~~~~v~diM~p------ 157 (496)
T 4fxs_A 93 AGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---T------DLTKSVAAVMTP------ 157 (496)
T ss_dssp C--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---C------CTTSBGGGTSEE------
T ss_pred cccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---c------cCCCcHHHHhcC------
Confidence 3466789999999999999999999999999999999999999999999621 1 124567776631
Q ss_pred cccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 014157 372 PYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 427 (429)
Q Consensus 372 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l 427 (429)
..+++++++++++.++++.|.+++++.+|||| ++|+++|+||+.||++..
T Consensus 158 -----~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 158 -----KERLATVKEGATGAEVQEKMHKARVEKILVVN-DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp -----GGGCCEEECC----CGGGTCC---CCCEEEEC-TTSBCCEEECCC-----C
T ss_pred -----CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCCEEEeehHhHHHHhh
Confidence 11589999999999999999999999999999 599999999999999863
No 112
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.29 E-value=2.9e-13 Score=138.56 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=0.0
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC---CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 014157 294 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN---DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 370 (429)
Q Consensus 294 ~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~---g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~ 370 (429)
|.++++++.+++++.+++++|.+++++++||+|++ ++++|+||.+|++.. .. ..+.++.++|
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~~-------~~~~~V~diM------- 167 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-LT-------QTETKVSDMM------- 167 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-hc-------cccCcHHHHh-------
Confidence 56688999999999999999999999999999987 899999999999864 11 1245777776
Q ss_pred CcccccCCC--ceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 371 SPYELRSQR--CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 371 ~~~~~~~~~--~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.++ ++++++++++.+|+++|.+++++++|||| ++|+++|+||.+||++.+.
T Consensus 168 ------~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 168 ------TPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID-DDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------
T ss_pred ------CCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc-CCCeEEEEEEecHHHHhhh
Confidence 334 89999999999999999999999999999 5899999999999998764
No 113
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.29 E-value=3.1e-13 Score=138.43 Aligned_cols=115 Identities=17% Similarity=0.347 Sum_probs=4.7
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 014157 291 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 370 (429)
Q Consensus 291 ~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~ 370 (429)
.++|.++++++.+++++.+|+++|.+++++++||+|++++++|+||.+|+.+... .+.++.++|
T Consensus 98 ~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~---------~~~~v~~im------- 161 (494)
T 1vrd_A 98 ENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKN---------LSKKIKDLM------- 161 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcC---------CCCcHHHHh-------
Confidence 3447778999999999999999999999999999998899999999999986311 135677766
Q ss_pred CcccccCC--CceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 371 SPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 371 ~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
.+ +++++.+++++.+++++|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 162 ------~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 162 ------TPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS-KDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp ------------------------------------------------------CHHHHT
T ss_pred ------CCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHhhhc
Confidence 44 788999999999999999999999999999 5899999999999998864
No 114
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.28 E-value=1.1e-11 Score=127.80 Aligned_cols=123 Identities=14% Similarity=0.163 Sum_probs=101.4
Q ss_pred CCCccCCCCceecCCC-CcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCc
Q 014157 199 SHGKAFPRPLVYAGPN-DNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 277 (429)
Q Consensus 199 ~~g~~~~~~~i~v~~~-~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~ 277 (429)
.++++|.++++++.++ +|+.+|+++|.+++++++||+| .+++ +++|+||.+||++.+..... ....+
T Consensus 385 ~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd--~~~g---~lvGiVt~~Dll~~l~~~~~-------~~~~~ 452 (527)
T 3pc3_A 385 AIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD--QDDG---SVLGVVGQETLITQIVSMNR-------QQSDP 452 (527)
T ss_dssp BGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC--TTTC---CEEEEEEHHHHHHHHHHHCC-------CTTSB
T ss_pred cHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE--CCCC---EEEEEEEHHHHHHHHHhccC-------cCCCc
Confidence 4567899999999999 9999999999999999999995 1345 79999999999988765311 11233
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC----CcEEEEEeHHHHHHHHhcc
Q 014157 278 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN----DSLLDIYCRSDITALAKDK 347 (429)
Q Consensus 278 v~~l~i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~----g~lvGivt~~Di~~~~~~~ 347 (429)
++ ++|.++++++.+++++.+++++|.+++ .+||+|++ |+++|+||..||++.+...
T Consensus 453 V~------------~im~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 453 AI------------KALNKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp GG------------GGEETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred HH------------HHhcCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 33 447789999999999999999997665 47999974 8999999999999877653
No 115
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.27 E-value=4.4e-13 Score=136.51 Aligned_cols=115 Identities=17% Similarity=0.267 Sum_probs=0.8
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 014157 291 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 370 (429)
Q Consensus 291 ~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~ 370 (429)
+++|..+++++.+++++.+++++|.+++++++||+| +++++|+||.+|+..... .+.++.++|..
T Consensus 91 ~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~---------~~~~V~~vMtp----- 155 (490)
T 4avf_A 91 ETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN---------AGDTVAAIMTP----- 155 (490)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc---------cCCcHHHHhcc-----
Confidence 344667889999999999999999999999999999 899999999999963211 14677887631
Q ss_pred CcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 014157 371 SPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 427 (429)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l 427 (429)
..+++++++++++.+|+++|.+++++.+|||| ++|+++|+||+.||++..
T Consensus 156 ------~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 156 ------KDKLVTAREGTPLEEMKAKLYENRIEKMLVVD-ENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------------------------
T ss_pred ------CCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEehHHhhhhc
Confidence 01689999999999999999999999999999 599999999999999864
No 116
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.19 E-value=1.8e-12 Score=129.55 Aligned_cols=109 Identities=22% Similarity=0.286 Sum_probs=0.0
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC---CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 014157 294 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD---NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 370 (429)
Q Consensus 294 ~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~---~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~ 370 (429)
|..+++++.++.++.+|+++|.+++++.+||+++ +++++|++|.+|+... + .+.++.++|
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d--------~~~~V~evM------- 206 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D--------AETPIKSVM------- 206 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c--------cceEhhhhc-------
Confidence 3457899999999999999999999999999986 6799999999998541 1 135678776
Q ss_pred CcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHH
Q 014157 371 SPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKF 426 (429)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~ 426 (429)
++++++++.+.++.+|.++|.++++..||||| ++++|+|+||+.|+.+.
T Consensus 207 ------T~~lvt~~~~~~leeA~~iL~~~kieklpVVd-~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 207 ------TTEVVTGSSPITLEKANSLLRETKKGKLPIVD-SNGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------
T ss_pred ------ccceEEecCCCCHHHHHHHHHHccccceeEEc-cCCcEEEEEEechhhhh
Confidence 55799999999999999999999999999999 59999999999999875
No 117
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.18 E-value=1.3e-11 Score=129.92 Aligned_cols=137 Identities=15% Similarity=0.101 Sum_probs=99.4
Q ss_pred CCccCC--CCceecCCCCcHHHHHHHHH-hcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCC-----
Q 014157 200 HGKAFP--RPLVYAGPNDNLKDVARKIL-HNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSL----- 271 (429)
Q Consensus 200 ~g~~~~--~~~i~v~~~~sl~da~~~m~-~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~----- 271 (429)
++++|+ ++++++++++++.|+.+.|. +++.+++||+| +++ +++|++|.+|+++.+...........
T Consensus 455 V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd---~~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 455 AREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVID---ANG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp HHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBC---TTC---BBCCEESHHHHTTTTTTC-------------
T ss_pred HHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEe---cCC---eEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 456788 89999999999999999999 79999999996 355 79999999999976644311100000
Q ss_pred ------cccCCcccccc-----------------CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC
Q 014157 272 ------PILKLPICAIP-----------------VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN 328 (429)
Q Consensus 272 ------~~l~~~v~~l~-----------------i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~ 328 (429)
..+.+.+..+. +-...+++.++|.++++++++++++.+++++|.+++++++||+ ++
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-EC
Confidence 00000011100 0011123778899999999999999999999999999999999 68
Q ss_pred CcEEEEEeHHHHHHH
Q 014157 329 DSLLDIYCRSDITAL 343 (429)
Q Consensus 329 g~lvGivt~~Di~~~ 343 (429)
|+++|+||++|+++.
T Consensus 608 G~lvGIVT~~Dll~~ 622 (632)
T 3org_A 608 GKLVGIVEREDVAYG 622 (632)
T ss_dssp TEEEEEEEGGGTEEC
T ss_pred CEEEEEEehhhHHHH
Confidence 999999999999754
No 118
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.16 E-value=2.5e-12 Score=131.56 Aligned_cols=156 Identities=17% Similarity=0.162 Sum_probs=18.4
Q ss_pred CCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccC
Q 014157 204 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 283 (429)
Q Consensus 204 ~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i 283 (429)
|.++++++.+++|+.+|+++|.+++++++||+|.+...+ +++|++|.+|++.. . . ....
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~--~---~------~~~~------- 161 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID--L---T------QTET------- 161 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh--h---c------cccC-------
Confidence 778999999999999999999999999999996211125 79999999999752 0 0 1122
Q ss_pred cccccccCCCCCCC--ceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 014157 284 GTWVPKIGEPNRRP--LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQ 361 (429)
Q Consensus 284 ~~~~~~v~~~~~~~--~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~ 361 (429)
.+.++|.++ ++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+||++....... ..+
T Consensus 162 -----~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~---------~~d 227 (503)
T 1me8_A 162 -----KVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE---------LVD 227 (503)
T ss_dssp -----------------------------------------------------------------CCC---------CBC
T ss_pred -----cHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc---------hhc
Confidence 244447776 9999999999999999999999999999999999999999999976543211 011
Q ss_pred HHhcCCCCCCcccccCCCceEEcCCCCHHHHHHHHHcCCCCEEEE
Q 014157 362 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVI 406 (429)
Q Consensus 362 ~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~V 406 (429)
.. ..++ ....+.. ....+.++.|.+.+++.+.|
T Consensus 228 ~~---------~~l~--v~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 228 SQ---------KRYL--VGAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp TT---------SCBC--CEEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cc---------cccc--cccccCc-hhHHHHHHHHHhhhccceEE
Confidence 00 0011 1123444 56666788888888886544
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.11 E-value=1e-09 Score=112.18 Aligned_cols=115 Identities=16% Similarity=0.248 Sum_probs=97.8
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 282 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 282 (429)
+|..+++++.+++++.+|++.|.+++++++||++. .+++ +++|++|.+|++.. . ....
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~-----~-------~~~~------ 152 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFI-----S-------DYNA------ 152 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHC-----S-------CSSS------
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhh-----c-------cCCC------
Confidence 57889999999999999999999999999999951 1235 79999999999742 0 0112
Q ss_pred CcccccccCCCCCC-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 283 VGTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 283 i~~~~~~v~~~~~~-~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
.+.++|.+ +++++.+++++.++++.|.+++++.+||+|++|+++|++|..|+++...
T Consensus 153 ------~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 153 ------PISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------BTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ------cHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 24455777 8899999999999999999999999999999999999999999998765
No 120
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.10 E-value=1.1e-12 Score=134.84 Aligned_cols=117 Identities=21% Similarity=0.248 Sum_probs=67.3
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC---CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 014157 290 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD---NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 366 (429)
Q Consensus 290 v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~---~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~ 366 (429)
+.++|.++++++.+++++.+|+++|.+++++.+||+|+ +++++|+||.+|+...... ....++.++|
T Consensus 110 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------~~~~~v~~vm--- 179 (514)
T 1jcn_A 110 FEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------DHTTLLSEVM--- 179 (514)
T ss_dssp CCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------------
T ss_pred hhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc-------cCCCCHHHHh---
Confidence 34457778899999999999999999999999999997 5899999999998753210 1235677766
Q ss_pred CCCCCcccccCC--CceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 014157 367 QDSYSPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 427 (429)
Q Consensus 367 ~~~~~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l 427 (429)
.+ +++++.+++++.+++++|.+++++++|||| ++|+++|+||++||++++
T Consensus 180 ----------~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 180 ----------TPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN-DCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEES-SSSCCC----CCCCSSCC
T ss_pred ----------CCCCCCeEECCCCCHHHHHHHHHHcCCCcccEEC-CCCeEEEEEEHHHHHHHh
Confidence 44 789999999999999999999999999999 589999999999998754
No 121
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.07 E-value=2.2e-11 Score=121.70 Aligned_cols=113 Identities=24% Similarity=0.318 Sum_probs=0.0
Q ss_pred CCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccccC
Q 014157 204 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 283 (429)
Q Consensus 204 ~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i 283 (429)
+..+++++.|+.|+.||..+|.+++++.+||++....++ +++||+|.+|+. |- . ...+
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f~-----d-------~~~~------ 201 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-FQ-----D-------AETP------ 201 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-cc-----c-------cceE------
Confidence 567789999999999999999999999999997433356 899999999973 21 1 1223
Q ss_pred cccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 284 GTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 284 ~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
+.++|.++++++..+.++.+|.++|.++++..+||||++++++|+||++|+.+..
T Consensus 202 ------V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 202 ------IKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred ------hhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 3444888999999999999999999999999999999999999999999998644
No 122
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.06 E-value=1.7e-11 Score=124.99 Aligned_cols=108 Identities=17% Similarity=0.351 Sum_probs=0.0
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCcc
Q 014157 294 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPY 373 (429)
Q Consensus 294 ~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l~~~~~~~~~~ 373 (429)
|..+++++.+++++.++++.|.+++++++||+|+ ++++|+|+.+|++. . .+.++.++|
T Consensus 99 m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~--------~~~~v~~im---------- 156 (486)
T 2cu0_A 99 IVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R--------EGKLVKELM---------- 156 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C--------CCCCHHHHc----------
Confidence 5668889999999999999999999999999997 99999999999975 1 135677766
Q ss_pred cccCCCceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 014157 374 ELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 427 (429)
Q Consensus 374 ~~~~~~~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l 427 (429)
.++++++++++++.++++.|.+++++.+|||| ++|+++|+||..||++.+
T Consensus 157 ---~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd-e~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 157 ---TKEVITVPESIEVEEALKIMIENRIDRLPVVD-ERGKLVGLITMSDLVARK 206 (486)
T ss_dssp ------------------------------------------------------
T ss_pred ---cCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe-cCCeEEEEEEHHHHHHhh
Confidence 45788999999999999999999999999999 589999999999999865
No 123
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.06 E-value=6.6e-11 Score=120.56 Aligned_cols=113 Identities=17% Similarity=0.197 Sum_probs=83.0
Q ss_pred ccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccc
Q 014157 202 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 281 (429)
Q Consensus 202 ~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 281 (429)
..|..+++++++++++.+|+++|.+++++++||++ +++ +++|++|.+|++. .. ....+
T Consensus 93 ~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd---~~~---~lvGiVt~rDL~~------~~------~~~~~---- 150 (496)
T 4fxs_A 93 AGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVT---ENN---ELVGIITGRDVRF------VT------DLTKS---- 150 (496)
T ss_dssp C--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEEC---SSS---BEEEEEEHHHHTT------CC------CTTSB----
T ss_pred cccccCceEECCCCCHHHHHHHHHHcCCcEEEEEc---cCC---EEEEEEEHHHHhh------cc------cCCCc----
Confidence 35788999999999999999999999999999996 345 8999999999851 10 11223
Q ss_pred cCcccccccCCCCC-C-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 282 PVGTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 282 ~i~~~~~~v~~~~~-~-~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
+.++|. + +++++.+++++.+++++|.++++..+||+|++|+++|+||.+|+++..
T Consensus 151 --------v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 151 --------VAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp --------GGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred --------HHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 334476 3 589999999999999999999999999999999999999999998754
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.01 E-value=8.6e-11 Score=120.23 Aligned_cols=114 Identities=18% Similarity=0.323 Sum_probs=4.9
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 282 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 282 (429)
+|.++++++.+++++.+|+++|.+++++.+||+| +++ +++|++|.+|+++. . ....
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd---~~~---~lvGivt~~Dl~~~--~----------~~~~------ 155 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVD---EEG---RLVGLLTNRDVRFE--K----------NLSK------ 155 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEc---CCC---EEEEEEEHHHHHhh--c----------CCCC------
Confidence 5788999999999999999999999999999996 345 79999999999741 0 0112
Q ss_pred CcccccccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 014157 283 VGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 346 (429)
Q Consensus 283 i~~~~~~v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~ 346 (429)
.+.++|.+ +++++.+++++.+++++|.+++++.+||+|++|+++|+||..|+++....
T Consensus 156 ------~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 156 ------KIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -----------------------------------------------------------CHHHHTC
T ss_pred ------cHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 24445777 89999999999999999999999999999999999999999999987643
No 125
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.98 E-value=1.4e-10 Score=118.09 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=0.4
Q ss_pred ccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccc
Q 014157 202 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 281 (429)
Q Consensus 202 ~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 281 (429)
..|..+++++++++|+.+|+++|.+++++++||+| ++ +++|++|.+|+... . ....+
T Consensus 92 ~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~-~-----------~~~~~---- 148 (490)
T 4avf_A 92 TAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVK-P-----------NAGDT---- 148 (490)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhc-c-----------ccCCc----
Confidence 35778899999999999999999999999999995 45 79999999998521 0 11222
Q ss_pred cCcccccccCCCCC-C-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 282 PVGTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 282 ~i~~~~~~v~~~~~-~-~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
+.++|. + +++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++...
T Consensus 149 --------V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 149 --------VAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ------------------------------------------------------------------
T ss_pred --------HHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 334477 3 6899999999999999999999999999999999999999999998653
No 126
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.85 E-value=3.3e-09 Score=78.19 Aligned_cols=62 Identities=16% Similarity=0.334 Sum_probs=50.5
Q ss_pred ceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHH
Q 014157 298 LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 363 (429)
Q Consensus 298 ~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l 363 (429)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++....... +..+.+++++|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~---~~~~~~V~~iM 63 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGK---NPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTC---CGGGCBGGGTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCC---CcccCCHHHhc
Confidence 57899999999999999999999999998 6899999999999864432211 23356788766
No 127
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.82 E-value=8.9e-10 Score=112.34 Aligned_cols=110 Identities=15% Similarity=0.309 Sum_probs=0.4
Q ss_pred cCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCcccccc
Q 014157 203 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 282 (429)
Q Consensus 203 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 282 (429)
.|..+++++.+++++.++++.|.+++.+++||++ + + +++|+++.+|++. . ...+
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd---~-~---~lvGivt~~Dl~~---~-----------~~~~----- 151 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVE---D-E---KVVGIITKKDIAA---R-----------EGKL----- 151 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEE---C-C---EEEEEEEHHHhcc---C-----------CCCC-----
Confidence 4778999999999999999999999999999996 2 5 7999999999874 0 0122
Q ss_pred CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 014157 283 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 345 (429)
Q Consensus 283 i~~~~~~v~~~~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~ 345 (429)
+.++|.++++++.+++++.+++++|.+++++.+||+|++|+++|++|.+||++...
T Consensus 152 -------v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 152 -------VKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp --------------------------------------------------------------C
T ss_pred -------HHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 33447778899999999999999999999999999999999999999999998653
No 128
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.74 E-value=3.5e-10 Score=116.24 Aligned_cols=118 Identities=20% Similarity=0.283 Sum_probs=66.8
Q ss_pred ccCCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCCeEEEEEehhhHHHHHHhhcccCCCCCcccCCccccc
Q 014157 202 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 281 (429)
Q Consensus 202 ~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~~~~~~lvgilt~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 281 (429)
++|.++++++.+++++.+|+++|.+++++.+||+|.+..++ +++|++|.+|+..... .....
T Consensus 112 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~~----- 173 (514)
T 1jcn_A 112 QGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----------KDHTT----- 173 (514)
T ss_dssp TTSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC------------------------
T ss_pred hccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----------ccCCC-----
Confidence 45778899999999999999999999999999996211035 7999999999864210 00112
Q ss_pred cCcccccccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 014157 282 PVGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 344 (429)
Q Consensus 282 ~i~~~~~~v~~~~~~--~~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~ 344 (429)
.+.++|.+ +++++.+++++.+++++|.+++.+.+||||++|+++|+||++|+++..
T Consensus 174 -------~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 174 -------LLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp --------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred -------CHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 24445777 899999999999999999999999999999999999999999987643
No 129
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.72 E-value=3.4e-08 Score=72.70 Aligned_cols=47 Identities=23% Similarity=0.408 Sum_probs=43.7
Q ss_pred ceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 380 CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 380 ~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
++++.+++++.+|+++|.+++++++||+| +|+++||||.+||++.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d--~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 67899999999999999999999999999 589999999999987653
No 130
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.55 E-value=9.4e-08 Score=69.88 Aligned_cols=62 Identities=16% Similarity=0.333 Sum_probs=50.8
Q ss_pred ceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHH
Q 014157 298 LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 363 (429)
Q Consensus 298 ~~~v~~~~sl~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Di~~~~~~~~~~~l~l~~~~v~~~l 363 (429)
++++.+++++.+|++.|.+++++++||+|+ |+++|++|.+|+++....... ...+.+++++|
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~---~~~~~~v~~im 63 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGK---NPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTC---CGGGCBGGGTC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCC---CcccCCHHHhc
Confidence 578999999999999999999999999997 999999999999987543221 12246777766
No 131
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.50 E-value=3.3e-07 Score=66.89 Aligned_cols=47 Identities=26% Similarity=0.452 Sum_probs=43.9
Q ss_pred ceEEcCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 014157 380 CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 428 (429)
Q Consensus 380 ~~~v~~~~~l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~~l~ 428 (429)
+.++.+++++.+|++.|.+++++++||+| + |+++|+||.+||++++.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d-~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-G-DEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 67899999999999999999999999999 4 99999999999999863
No 132
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=98.20 E-value=5.7e-07 Score=95.64 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=34.8
Q ss_pred CcccCCceeEEEEEECCeee--ecCCCCc---ccCCCCCcceEE
Q 014157 1 MFFYIVHYVQYKFCVDGEWR--HDEHQPF---ISSEYGIVNTVL 39 (429)
Q Consensus 1 ~~~l~~g~~~ykf~vdg~w~--~~~~~~~---~~~~~g~~~n~~ 39 (429)
+++||||+|||||+|||+|+ +||+.|. +.|.+|.-|++.
T Consensus 59 ~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 59 YLKLWPGEYGYGFQIDNDFENVLDPDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp EEEECSEEEEEEEEETTCCSCCCCTTCCCEEEEECSSCTTSEEE
T ss_pred EEEcCCceEEEEEEECCEEeecCCCCCCcccccccCCcccccee
Confidence 47899999999999999999 8899874 569999999985
No 133
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=96.93 E-value=0.00037 Score=73.27 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=30.2
Q ss_pred cccCCceeEEEEEECCeeeecCCCCcc----cCCCCCcceEEE
Q 014157 2 FFYIVHYVQYKFCVDGEWRHDEHQPFI----SSEYGIVNTVLL 40 (429)
Q Consensus 2 ~~l~~g~~~ykf~vdg~w~~~~~~~~~----~~~~g~~~n~~~ 40 (429)
++||||.|+|||.|||+|..||..|.. .+.+|..+.+..
T Consensus 57 v~L~~G~y~Y~f~vdg~~~~dp~n~~~~~~~~~~~~~~~~~~~ 99 (645)
T 4aef_A 57 IALPEGVWHYAFSIDGKFVLDPDNPERRVYTRKGYKFHREVNV 99 (645)
T ss_dssp EEECSEEEEEEEEETTEEECCTTCCCEEEEEEGGGTEEEEEEE
T ss_pred EEeCCceEEEEEEECCeEecCCCCCCcccccccCcCcccceee
Confidence 679999999999999999999998754 344555444433
No 134
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=92.79 E-value=0.038 Score=45.25 Aligned_cols=38 Identities=26% Similarity=0.466 Sum_probs=21.7
Q ss_pred cccCCce-eEEEEEE--------C-C-------eeeecCCC---------CcccC-CCCCcceEE
Q 014157 2 FFYIVHY-VQYKFCV--------D-G-------EWRHDEHQ---------PFISS-EYGIVNTVL 39 (429)
Q Consensus 2 ~~l~~g~-~~ykf~v--------d-g-------~w~~~~~~---------~~~~~-~~g~~~n~~ 39 (429)
++||.|. +||||++ + | .|...++. .++.| .+|..|++.
T Consensus 61 v~lp~~~~~eYKyvi~~~~~~~~~~g~~~v~~~~WE~g~~NR~l~~~~~~~~~~Dg~FG~~~~~~ 125 (131)
T 2z0b_A 61 IVLSRGVSVQYRYFKGYFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVE 125 (131)
T ss_dssp EEECTTCCEEEEEEEEEEECCCC----CEEEEEEECCSSCCEEECCCSSEEEEEEEETTC-----
T ss_pred EEcCCCCcEEEEEEEEeecCccccCCccccceeeECCCCCCcEEecCCCceEeecccCcccCCee
Confidence 5788885 9999999 5 4 78877722 23344 566665543
No 135
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=81.73 E-value=1 Score=43.96 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=36.1
Q ss_pred cccCCcee-EEEEEEC------------------------CeeeecCCCCcccC-CCCCcceEEEecCC
Q 014157 2 FFYIVHYV-QYKFCVD------------------------GEWRHDEHQPFISS-EYGIVNTVLLATEP 44 (429)
Q Consensus 2 ~~l~~g~~-~ykf~vd------------------------g~w~~~~~~~~~~~-~~g~~~n~~~~~~~ 44 (429)
+.||+|-| .|.|+|| |..+.||.+|.... ..|...+++.+...
T Consensus 84 ~~l~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~p~~ 152 (403)
T 3c8d_A 84 TQLNANWRGSYCFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQA 152 (403)
T ss_dssp EEEETTCEEEEEEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEECTTC
T ss_pred EEECCCcEEEEEEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccCCCC
Confidence 36899999 9999999 78889999997654 44888899999754
No 136
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=71.23 E-value=1.1 Score=34.86 Aligned_cols=15 Identities=20% Similarity=0.096 Sum_probs=12.7
Q ss_pred cccCCce-eEEEEEEC
Q 014157 2 FFYIVHY-VQYKFCVD 16 (429)
Q Consensus 2 ~~l~~g~-~~ykf~vd 16 (429)
++||+|. +||||++.
T Consensus 59 v~lp~~~~~eYKy~v~ 74 (108)
T 1ac0_A 59 VTLPAGESFEYKFIRI 74 (108)
T ss_dssp ECCCSSSCEECCCEEC
T ss_pred EEeCCCCeEEEEEEEE
Confidence 5788885 99999994
No 137
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=70.41 E-value=1.6 Score=29.10 Aligned_cols=13 Identities=46% Similarity=0.864 Sum_probs=11.1
Q ss_pred ECCeeeecCCCCc
Q 014157 15 VDGEWRHDEHQPF 27 (429)
Q Consensus 15 vdg~w~~~~~~~~ 27 (429)
|||+|-+|+...+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 6999999998754
No 138
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=69.26 E-value=1.3 Score=28.98 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=10.5
Q ss_pred ECCeeeecCCCCc
Q 014157 15 VDGEWRHDEHQPF 27 (429)
Q Consensus 15 vdg~w~~~~~~~~ 27 (429)
|||+|-+|+...+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 7999999987643
No 139
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=67.93 E-value=2 Score=28.87 Aligned_cols=13 Identities=38% Similarity=0.728 Sum_probs=10.8
Q ss_pred ECCeeeecCCCCc
Q 014157 15 VDGEWRHDEHQPF 27 (429)
Q Consensus 15 vdg~w~~~~~~~~ 27 (429)
|||+|-+|+...+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 6999999997654
No 140
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=59.52 E-value=3.4 Score=28.66 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=10.2
Q ss_pred ECCeeeecCCCCc
Q 014157 15 VDGEWRHDEHQPF 27 (429)
Q Consensus 15 vdg~w~~~~~~~~ 27 (429)
|||+|-+|+...+
T Consensus 58 vdgeWsYD~ATkT 70 (75)
T 2rpv_A 58 VDGEWTYDDATKT 70 (75)
T ss_dssp CCSEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 6899999987654
No 141
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=53.77 E-value=4.3 Score=26.63 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=12.7
Q ss_pred EEEEC-CeeeecCCCCc
Q 014157 12 KFCVD-GEWRHDEHQPF 27 (429)
Q Consensus 12 kf~vd-g~w~~~~~~~~ 27 (429)
...|| |+|.+|+...+
T Consensus 35 ~n~~d~geWtYddaTKT 51 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKT 51 (56)
T ss_pred hcCCcCCeeEecCccee
Confidence 45788 99999987654
No 142
>1pgx_A Protein G; immunoglobulin binding protein; 1.66A {Streptococcus} SCOP: d.15.7.1
Probab=53.70 E-value=3.9 Score=29.02 Aligned_cols=13 Identities=38% Similarity=0.728 Sum_probs=10.8
Q ss_pred ECCeeeecCCCCc
Q 014157 15 VDGEWRHDEHQPF 27 (429)
Q Consensus 15 vdg~w~~~~~~~~ 27 (429)
|||+|-+|+...+
T Consensus 52 vdgeWsYD~ATkT 64 (83)
T 1pgx_A 52 VDGVWTYDDATKT 64 (83)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCceEeeccccee
Confidence 5899999998754
No 143
>2jox_A Churchill protein; zinc, transcription; NMR {Homo sapiens}
Probab=50.98 E-value=6.7 Score=29.67 Aligned_cols=13 Identities=23% Similarity=0.559 Sum_probs=11.3
Q ss_pred eeEEEEEECCeee
Q 014157 8 YVQYKFCVDGEWR 20 (429)
Q Consensus 8 ~~~ykf~vdg~w~ 20 (429)
+|+|+|.|+|.++
T Consensus 69 ~HeYtF~V~~~yQ 81 (106)
T 2jox_A 69 RHEYTFSIMDEFQ 81 (106)
T ss_dssp EEEEEEEEETTEE
T ss_pred eeeEEEEEecCee
Confidence 7999999988765
No 144
>1b69_A Protein (integrase); integrase, DNA binding, transposition, complex, beta-sheet recognition; HET: DNA; NMR {Enterococcus faecalis} SCOP: d.10.1.1 PDB: 1tn9_A* 1bb8_A 2bb8_A
Probab=44.03 E-value=10 Score=26.79 Aligned_cols=11 Identities=18% Similarity=0.039 Sum_probs=8.3
Q ss_pred CCceeEEEEEE
Q 014157 5 IVHYVQYKFCV 15 (429)
Q Consensus 5 ~~g~~~ykf~v 15 (429)
.-|.|+|||.-
T Consensus 19 ~dG~Y~yry~d 29 (69)
T 1b69_A 19 KDGRYLYKYID 29 (69)
T ss_dssp SSSCEEEEEEC
T ss_pred cCCcEEEEEEc
Confidence 35889999853
No 145
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=42.98 E-value=15 Score=28.38 Aligned_cols=18 Identities=17% Similarity=0.342 Sum_probs=14.2
Q ss_pred CceeEEEEEECCeeeecCCC
Q 014157 6 VHYVQYKFCVDGEWRHDEHQ 25 (429)
Q Consensus 6 ~g~~~ykf~vdg~w~~~~~~ 25 (429)
.| |+|.|. ||+|++.-+.
T Consensus 67 sG-~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 67 GG-YHFDLK-GDEWICDRSG 84 (106)
T ss_dssp CE-EEEEEE-TTEEEETTTC
T ss_pred Cc-eeeeec-CCEEEECCCC
Confidence 35 999985 9999987654
No 146
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=42.66 E-value=40 Score=24.39 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=24.7
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 014157 319 VSSIPIVDDNDSLLDIYCRSDITALAKDK 347 (429)
Q Consensus 319 ~~~lpVvd~~g~lvGivt~~Di~~~~~~~ 347 (429)
...+=++|++|..+|+++..+.++++...
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~ 41 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARR 41 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHc
Confidence 45677899999999999999999887664
No 147
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=39.23 E-value=17 Score=34.40 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=19.4
Q ss_pred CCceeEEEEEECCeee---ecCCCCcc
Q 014157 5 IVHYVQYKFCVDGEWR---HDEHQPFI 28 (429)
Q Consensus 5 ~~g~~~ykf~vdg~w~---~~~~~~~~ 28 (429)
+.|.|+++|+.+|+|+ .|...|+.
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~ 146 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTK 146 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEE
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCccc
Confidence 4599999999999998 45666654
No 148
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=36.78 E-value=13 Score=40.43 Aligned_cols=18 Identities=28% Similarity=0.481 Sum_probs=16.5
Q ss_pred ccCCceeEEEEEECCeee
Q 014157 3 FYIVHYVQYKFCVDGEWR 20 (429)
Q Consensus 3 ~l~~g~~~ykf~vdg~w~ 20 (429)
.||+|.|+||+-++|.|.
T Consensus 204 ~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 204 TLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp EECSEEEEEEEEETTSSS
T ss_pred ccCCcceeEEEeecCccc
Confidence 599999999999999994
No 149
>2khu_A Immunoglobulin G-binding protein G, DNA polymerase IOTA; UBM, ubiquitin-binding domain, translesion synthesis, TLS, ubiquitin-binding protein; NMR {Streptococcus SP} PDB: 2khw_A 2l0f_B*
Probab=36.67 E-value=7.3 Score=29.30 Aligned_cols=14 Identities=43% Similarity=0.760 Sum_probs=0.0
Q ss_pred EECCeeeecCCCCc
Q 014157 14 CVDGEWRHDEHQPF 27 (429)
Q Consensus 14 ~vdg~w~~~~~~~~ 27 (429)
-|||+|.+|+...+
T Consensus 38 gvdgew~yd~atkt 51 (108)
T 2khu_A 38 GVDGEWTYDDATKT 51 (108)
T ss_dssp --------------
T ss_pred CCCceEeecCccee
Confidence 48999999998764
No 150
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=35.53 E-value=17 Score=30.23 Aligned_cols=35 Identities=37% Similarity=0.676 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCCCEEEEEeCCCCeEEEEEeHHHHHH
Q 014157 389 LHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFK 425 (429)
Q Consensus 389 l~~a~~~m~~~~v~~l~VVd~~~g~l~GiIs~~Dil~ 425 (429)
+.+.++.+...+..-++|-. +++++|+|...|.+|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~--d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE--GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE--CCEEEEEEEEecCCC
Confidence 67778888899988887776 699999999988654
No 151
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=35.40 E-value=17 Score=34.22 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=19.3
Q ss_pred CCceeEEEEEECCeee---ecCCCCcc
Q 014157 5 IVHYVQYKFCVDGEWR---HDEHQPFI 28 (429)
Q Consensus 5 ~~g~~~ykf~vdg~w~---~~~~~~~~ 28 (429)
+.|.|++||+.+|+|+ .|...|+.
T Consensus 115 ~~G~y~vr~~~~G~w~~VvVDD~lP~~ 141 (326)
T 2nqa_A 115 YAGIFHFQFWQYGEWVEVVIDDRLPTK 141 (326)
T ss_dssp CSSEEEEEEECSSSEEEEEEECCEEEE
T ss_pred CCceEEEEEEECCEEEEEEEeCcCccc
Confidence 4599999999999998 45566654
No 152
>1zxh_A Immunoglobulin G binding protein G; IGG-binding, phage display, immune system/protein binding complex; NMR {Streptococcus SP}
Probab=33.06 E-value=13 Score=24.69 Aligned_cols=13 Identities=31% Similarity=0.631 Sum_probs=10.8
Q ss_pred ECCeeeecCCCCc
Q 014157 15 VDGEWRHDEHQPF 27 (429)
Q Consensus 15 vdg~w~~~~~~~~ 27 (429)
|||+|-+|+...+
T Consensus 39 ~dg~w~yd~atkt 51 (56)
T 1zxh_A 39 VQGVWTYDDATKT 51 (56)
T ss_dssp TTSEECCCTTTCE
T ss_pred ccceeecccceee
Confidence 6899999997754
No 153
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=32.39 E-value=20 Score=33.92 Aligned_cols=24 Identities=21% Similarity=0.510 Sum_probs=19.2
Q ss_pred CCceeEEEEEECCeee---ecCCCCcc
Q 014157 5 IVHYVQYKFCVDGEWR---HDEHQPFI 28 (429)
Q Consensus 5 ~~g~~~ykf~vdg~w~---~~~~~~~~ 28 (429)
+.|.|++||+.+|+|+ .|...|+.
T Consensus 119 ~~G~y~~r~~~~G~W~~VvVDD~LP~~ 145 (339)
T 1ziv_A 119 YAGIFHFQFWQHSEWLDVVIDDRLPTF 145 (339)
T ss_dssp CCSEEEEEEECSSSEEEEEEECCEEES
T ss_pred cceEEEEEEeeCCEEEEEEEcCCCccC
Confidence 4799999999999998 45555653
No 154
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=29.42 E-value=74 Score=22.97 Aligned_cols=25 Identities=16% Similarity=0.310 Sum_probs=20.7
Q ss_pred CCEEEEEeCCCCeEEEEEeHHHHHHH
Q 014157 401 VRRLVIVEAGSKRVEGIVSLSDIFKF 426 (429)
Q Consensus 401 v~~l~VVd~~~g~l~GiIs~~Dil~~ 426 (429)
.+.+=+|+ ++|..+|+++..+-++.
T Consensus 13 ~~eVrli~-~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLID-QNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEEC-TTSCEEEEEEHHHHHHH
T ss_pred CCEEEEEC-CCCcCCCcccHHHHHHH
Confidence 45577899 59999999999998764
No 155
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=27.41 E-value=27 Score=27.73 Aligned_cols=19 Identities=16% Similarity=0.368 Sum_probs=15.3
Q ss_pred CceeEEEEEECCeeeecCCC
Q 014157 6 VHYVQYKFCVDGEWRHDEHQ 25 (429)
Q Consensus 6 ~g~~~ykf~vdg~w~~~~~~ 25 (429)
.|-|+|.|. +|+|++.-+.
T Consensus 86 SGp~hfd~~-~~~Wi~~r~g 104 (123)
T 3oeq_A 86 SGPNRFDLL-NGEWVSLRNG 104 (123)
T ss_dssp TEEEEEEES-SSSEEETTTC
T ss_pred CCCeeEeec-CCeEEECCCC
Confidence 688899984 8999987654
No 156
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=26.62 E-value=40 Score=26.49 Aligned_cols=24 Identities=4% Similarity=0.061 Sum_probs=19.6
Q ss_pred cCCceeEEEEEECCeeeecCCCCc
Q 014157 4 YIVHYVQYKFCVDGEWRHDEHQPF 27 (429)
Q Consensus 4 l~~g~~~ykf~vdg~w~~~~~~~~ 27 (429)
.+||.|.-.-+|.|+|+-.-+-.+
T Consensus 28 ~~PG~Y~vdI~vN~~~~~~~~i~f 51 (125)
T 3bwu_D 28 LPPGTYRVDIYLNNGYMATRDVTF 51 (125)
T ss_dssp SCSEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCcEEEEEEEECCeEccceEEEE
Confidence 589999999999999996554444
No 157
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=24.23 E-value=42 Score=26.51 Aligned_cols=20 Identities=25% Similarity=0.536 Sum_probs=15.2
Q ss_pred eeEEEEEECCeeeecCCCCcc
Q 014157 8 YVQYKFCVDGEWRHDEHQPFI 28 (429)
Q Consensus 8 ~~~ykf~vdg~w~~~~~~~~~ 28 (429)
-+.|+|+ |+.|..-=..+..
T Consensus 65 L~tYrfc-DnVWtfilkd~~f 84 (121)
T 1nh2_D 65 LDTYGFC-DDVWTFIVKNCQV 84 (121)
T ss_dssp EEEEEEE-TTEEEEEEEEEEE
T ss_pred ecccccc-CcEEEEEEeceEE
Confidence 4689998 9999976665543
No 158
>1pn5_A Nacht-, LRR- and PYD-containing protein 2; alpha-helix bundle, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.5
Probab=23.95 E-value=16 Score=30.32 Aligned_cols=15 Identities=40% Similarity=0.731 Sum_probs=0.0
Q ss_pred EECCeeeecCCCCcc
Q 014157 14 CVDGEWRHDEHQPFI 28 (429)
Q Consensus 14 ~vdg~w~~~~~~~~~ 28 (429)
-|||+|-+|+...+.
T Consensus 38 ~~~~~~~~~~~~~~~ 52 (159)
T 1pn5_A 38 GVDGEWTYDDATKTF 52 (159)
T ss_dssp ---------------
T ss_pred CCCceeecccccCcc
Confidence 489999999987543
No 159
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=21.45 E-value=49 Score=34.63 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=21.0
Q ss_pred CCceeEEEEEECCeee---ecCCCCccc
Q 014157 5 IVHYVQYKFCVDGEWR---HDEHQPFIS 29 (429)
Q Consensus 5 ~~g~~~ykf~vdg~w~---~~~~~~~~~ 29 (429)
+.|.|+++|+.+|+|+ .|...|+..
T Consensus 135 ~~G~y~~~~~~~G~w~~VvvDD~lP~~~ 162 (714)
T 3bow_A 135 YAGIFHFQFWQYGEWVEVVVDDRLPTKD 162 (714)
T ss_dssp CSSEEEEEEEETTEEEEEEEESCEEEET
T ss_pred CceEEEEEEeeCCEEEEEEEeccceeeC
Confidence 4699999999999998 577778753
No 160
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=21.20 E-value=45 Score=26.65 Aligned_cols=19 Identities=11% Similarity=0.281 Sum_probs=15.2
Q ss_pred CceeEEEEEECCeeeecCCC
Q 014157 6 VHYVQYKFCVDGEWRHDEHQ 25 (429)
Q Consensus 6 ~g~~~ykf~vdg~w~~~~~~ 25 (429)
.|=|+|.|. +|+|++.-+.
T Consensus 80 SGp~hfd~~-~~~Wi~~rdg 98 (129)
T 3t3l_A 80 SGPKRYDWT-GKNWVYSHDG 98 (129)
T ss_dssp SCCEEEEEC-SSSEEETTTC
T ss_pred CCCeeeEec-CCEEEECCCC
Confidence 588999984 7899987664
No 161
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0
Probab=20.04 E-value=46 Score=27.45 Aligned_cols=11 Identities=18% Similarity=0.105 Sum_probs=5.2
Q ss_pred CCceeEEEEEE
Q 014157 5 IVHYVQYKFCV 15 (429)
Q Consensus 5 ~~g~~~ykf~v 15 (429)
|+|.|+|.|.|
T Consensus 104 P~g~HrY~F~v 114 (153)
T 3n08_A 104 PDAKHRYYFYA 114 (153)
T ss_dssp SSSCEEEEEEE
T ss_pred cCCCEEEEEEE
Confidence 34445555544
Done!