Your job contains 1 sequence.
>014159
MEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLD
SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS
VGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL
IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASR
YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS
FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV
LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE
FYDIDSYGS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014159
(429 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2054038 - symbol:SCY1 "AT2G18710" species:3702... 1810 1.2e-186 1
TIGR_CMR|CBU_0258 - symbol:CBU_0258 "preprotein transloca... 633 6.2e-62 1
TIGR_CMR|GSU_2837 - symbol:GSU_2837 "preprotein transloca... 630 1.3e-61 1
TIGR_CMR|SPO_0506 - symbol:SPO_0506 "preprotein transloca... 615 5.0e-60 1
TIGR_CMR|BA_0130 - symbol:BA_0130 "preprotein translocase... 609 2.2e-59 1
UNIPROTKB|P78283 - symbol:secY "Protein translocase subun... 608 2.7e-59 1
TIGR_CMR|VC_2576 - symbol:VC_2576 "preprotein translocase... 608 2.7e-59 1
TIGR_CMR|CHY_2289 - symbol:CHY_2289 "preprotein transloca... 597 4.0e-58 1
NCBI_NP|NP_354903.2 - symbol:prlA "preprotein translocase... 591 1.7e-57 1
TIGR_CMR|CPS_0621 - symbol:CPS_0621 "preprotein transloca... 589 2.8e-57 1
UNIPROTKB|P0AGA2 - symbol:secY species:83333 "Escherichia... 586 5.9e-57 1
TIGR_CMR|BA_2734 - symbol:BA_2734 "preprotein translocase... 583 1.2e-56 1
TIGR_CMR|SO_0251 - symbol:SO_0251 "preprotein translocase... 580 2.5e-56 1
TIGR_CMR|CJE_1856 - symbol:CJE_1856 "preprotein transloca... 565 9.9e-55 1
UNIPROTKB|P0A5Z2 - symbol:secY "Protein translocase subun... 546 1.0e-52 1
TIGR_CMR|DET_0494 - symbol:DET_0494 "preprotein transloca... 542 2.7e-52 1
TIGR_CMR|APH_0299 - symbol:APH_0299 "preprotein transloca... 536 1.2e-51 1
TIGR_CMR|ECH_0428 - symbol:ECH_0428 "preprotein transloca... 535 1.5e-51 1
UNIPROTKB|P25014 - symbol:secY "Protein translocase subun... 407 5.5e-38 1
TIGR_CMR|NSE_0285 - symbol:NSE_0285 "preprotein transloca... 402 1.9e-37 1
TAIR|locus:2065868 - symbol:SCY2 "SECY HOMOLOG 2" species... 347 3.9e-31 1
>TAIR|locus:2054038 [details] [associations]
symbol:SCY1 "AT2G18710" species:3702 "Arabidopsis
thaliana" [GO:0009306 "protein secretion" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IEA;ISS] [GO:0016020
"membrane" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010027 "thylakoid membrane organization"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=RCA] InterPro:IPR002208 Pfam:PF00344 PROSITE:PS00755
PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0010027
GO:GO:0009535 EMBL:AC005724 eggNOG:COG0201 KO:K10956
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 EMBL:U37247 EMBL:AF424550 EMBL:AY058103
EMBL:AY065093 EMBL:BT002632 IPI:IPI00538301 PIR:A57189 PIR:F84567
RefSeq:NP_179461.1 UniGene:At.10218 ProteinModelPortal:Q38885
SMR:Q38885 IntAct:Q38885 STRING:Q38885 PaxDb:Q38885 PRIDE:Q38885
EnsemblPlants:AT2G18710.1 GeneID:816386 KEGG:ath:AT2G18710
TAIR:At2g18710 HOGENOM:HOG000080585 InParanoid:Q38885 OMA:FIMWLGE
PhylomeDB:Q38885 ProtClustDB:CLSN2683056 Genevestigator:Q38885
GermOnline:AT2G18710 InterPro:IPR026593 Uniprot:Q38885
Length = 551
Score = 1810 (642.2 bits), Expect = 1.2e-186, P = 1.2e-186
Identities = 358/427 (83%), Positives = 380/427 (88%)
Query: 1 MEDSSIDFGDXXXXXXXXXXXXXXXYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLD 60
+EDSSIDFGD +LALSRLGIYIPLGGVNREAFVGNLDQNS+LSTLD
Sbjct: 123 IEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSILSTLD 182
Query: 61 SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS 120
+FSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQYTRYAS
Sbjct: 183 TFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYAS 242
Query: 121 VGFAIVQAIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLL 180
VGFAIVQAIGQV YLRPYVNDF GS TTYIGERISDLKLGNGTSLL
Sbjct: 243 VGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSLL 302
Query: 181 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 240
IFTSIISYLPASFGRT AEA Q+GNY GL TI++SF+LLVLGIVYVQEAERKIP+NYASR
Sbjct: 303 IFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGIVYVQEAERKIPLNYASR 362
Query: 241 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS 300
YTS++GGLQ+SAYLPFKVNS+GVMPIIFSTSSLALP TLARFTGI+ALK A AL PGGS
Sbjct: 363 YTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFALTPGGS 422
Query: 301 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 360
FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA F+KTVL RISV
Sbjct: 423 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVLGRISV 482
Query: 361 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 420
LGS FLA+LAAGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE
Sbjct: 483 LGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 542
Query: 421 FYDIDSY 427
FY++D Y
Sbjct: 543 FYELDKY 549
>TIGR_CMR|CBU_0258 [details] [associations]
symbol:CBU_0258 "preprotein translocase, SecY subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] [GO:0015627 "type II protein secretion
system complex" evidence=ISS] [GO:0015628 "protein secretion by the
type II secretion system" evidence=ISS] HAMAP:MF_01465
InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00756
PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886 GO:GO:0006605
GO:GO:0005622 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0065002
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 HOGENOM:HOG000080585 OMA:FIMWLGE
InterPro:IPR026593 GO:GO:0043952 KO:K03076 ProtClustDB:PRK09204
RefSeq:NP_819302.1 ProteinModelPortal:Q83EQ6 GeneID:1208139
KEGG:cbu:CBU_0258 PATRIC:17929209
BioCyc:CBUR227377:GJ7S-264-MONOMER Uniprot:Q83EQ6
Length = 442
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 138/399 (34%), Positives = 243/399 (60%)
Query: 31 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 88
RLG YIP+ G++ R A + + + L + FSGG + R+ I +LG++P+I++ I+ Q
Sbjct: 33 RLGAYIPVPGLDPSRLAALFHQHETGFLGMFNMFSGGALSRMTIFALGVMPYISSSIIVQ 92
Query: 89 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL---RPYVNDFXXX 145
+ +QI+PK+Q L+K EGEAGR+K+ QYTRY +V +++Q+ +L +N
Sbjct: 93 MYSQISPKMQALRK-EGEAGRRKINQYTRYGTVILSLLQSAFMTKWLVSSGTVINP-NLG 150
Query: 146 XXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN 205
G+ F ++GE++++ +GNG SL+IF SI S PA+ G+ + Q
Sbjct: 151 FYFTAIVTLVTGTMFLMWLGEQMTERGVGNGISLIIFASIASRFPAAIGQVFTQVRQGQM 210
Query: 206 YIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 264
+ + ++I+ I+LV L +V+ + A+R+I INYA R R +S++LP K+N +GV+
Sbjct: 211 SVLILLLLIAVIVLVTLVVVFFERAQRRITINYAKRQQGRKLYAAQSSHLPLKINMAGVI 270
Query: 265 PIIFSTSSLALPGTLARFT----GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFL 320
P+IF+ S + PG +A+F G+ L ++AL+ G Y+ + + FF+++YT L
Sbjct: 271 PVIFAQSIILFPGAVAKFMSSVKGLGWLNDVSLALSYGQPAYIVVFAIAVIFFSFFYTAL 330
Query: 321 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 380
+P + ++ LK+ GA IP +RPG+ TA ++ V++R++++GSV+LA++A P +
Sbjct: 331 VFNPKETADNLKKSGAFIPGIRPGEQTANYIDKVMTRLTLVGSVYLALVALLPQFLILAW 390
Query: 381 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 419
++ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 391 NVPFY--FGGTSLLIVVVVIMDFMAQVQAHLMSHQYESL 427
>TIGR_CMR|GSU_2837 [details] [associations]
symbol:GSU_2837 "preprotein translocase, SecY subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557
PROSITE:PS00755 PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021
GO:GO:0005886 GO:GO:0006605 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0065002 Gene3D:1.10.3370.10
InterPro:IPR023201 SUPFAM:SSF103491 TIGRFAMs:TIGR00967 OMA:FIMWLGE
InterPro:IPR026593 GO:GO:0043952 KO:K03076 ProtClustDB:PRK09204
HOGENOM:HOG000080586 RefSeq:NP_953880.1 ProteinModelPortal:Q749A7
GeneID:2688725 KEGG:gsu:GSU2837 PATRIC:22028521
BioCyc:GSUL243231:GH27-2796-MONOMER Uniprot:Q749A7
Length = 435
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 141/405 (34%), Positives = 240/405 (59%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
LA+ R+G +IP G++ A Q +LL D FSGG + +L + +LGI+P+I++
Sbjct: 25 LAVYRVGCHIPTPGIDSNALAHFFAQARGTLLGLFDMFSGGALEKLTVFALGIMPYISSS 84
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----P--- 137
I+FQLL + P ++ L K EGE+GRKK++QYTRY ++ ++VQA+G + L P
Sbjct: 85 IIFQLLTVVVPSIEKLSK-EGESGRKKIIQYTRYGTIVLSVVQALGISIGLESMRGPAGE 143
Query: 138 -YVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF--- 193
V + G+AF ++GE++S+ +GNG SL+IF I++ +P +
Sbjct: 144 LVVPNPGWGFRLMTVITLTAGTAFIMWLGEQMSEKGIGNGISLIIFAGIVARIPTALLNT 203
Query: 194 GRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS-RSGGLQRSA 252
GR + Q ++ L + + F L++ IVYV+ +R++PI+YA R ++ G Q S
Sbjct: 204 GRLIKTG-QLSLFVILLVVALMF-LVIAAIVYVERGQRRLPIHYAKRVVGLKTYGGQTS- 260
Query: 253 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 312
+LP KVN +GV+P IF++S + P T+A F + ++ A +L PG Y + I F
Sbjct: 261 HLPLKVNMAGVIPPIFASSIIMFPATVANFINVPWVQTVAKSLTPGNLAYEIFYVAFIIF 320
Query: 313 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 372
F Y+YT + +P DV+E +K+ G IP +RPGK T+ +L VL++++ G+++++ +
Sbjct: 321 FCYFYTAVSFNPVDVAENVKKHGGYIPGIRPGKETSDYLDRVLTKLTFAGALYISAVCVL 380
Query: 373 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 417
P+V+ +L + F GT++LI VG DTA ++++ +I++ Y+
Sbjct: 381 PSVLVGKFNLPFY--FGGTALLIAVGVGMDTAAQIESHLITRSYE 423
>TIGR_CMR|SPO_0506 [details] [associations]
symbol:SPO_0506 "preprotein translocase, SecY subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557
PROSITE:PS00755 PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021
GO:GO:0005886 GO:GO:0006605 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0005622 GO:GO:0065002 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 HOGENOM:HOG000080585
OMA:FIMWLGE InterPro:IPR026593 GO:GO:0043952 KO:K03076
ProtClustDB:PRK09204 RefSeq:YP_165768.1 ProteinModelPortal:Q5LW37
GeneID:3194103 KEGG:sil:SPO0506 PATRIC:23374275 Uniprot:Q5LW37
Length = 455
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 147/407 (36%), Positives = 233/407 (57%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L + RLG +IP+ G++ A ++Q + + F+GG +GR+GI +LGI+P+I+A
Sbjct: 34 LIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSMFTGGALGRMGIFALGIMPYISAS 93
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP--YVNDF 142
I+ QLL + P L+ L K+EGE GRKK+ QYTR +V A VQA G + L +
Sbjct: 94 IIVQLLTAMVPSLEQL-KKEGEQGRKKINQYTRLGTVALATVQAYGLAVSLESGDLATEP 152
Query: 143 XXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ 202
G+ F ++GE+I+ +GNG SL+IF II+ +PA+ +A+ F
Sbjct: 153 GMYFRFATMITLVGGTMFLMWLGEQITARGIGNGVSLIIFVGIIAEVPAA----LAQFFA 208
Query: 203 DGNYIGLA-TIIISFILLVLGI----VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFK 257
G ++ +II+ IL+V+ + V+++ A RKI I Y R S++LP K
Sbjct: 209 SGRSGAISPAVIIAIILMVIAVITFVVFMERALRKIHIQYPRRQVGMKVYDGGSSHLPVK 268
Query: 258 VNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILLIAFF 313
VN +GV+P IF++S L LP T++ F+ AA + PG YL + +I FF
Sbjct: 269 VNPAGVIPAIFASSLLLLPVTISTFSSGAANGPVMSWLLANFGPGQPLYLLFFVSMIVFF 328
Query: 314 NYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 372
Y+YTF + PDDV++ LK Q +P +RPGK TA +L+ V++R+ VLGS +LA +
Sbjct: 329 AYFYTFNVSFKPDDVAQNLKNQNGFVPGIRPGKKTAEYLEYVVNRVLVLGSAYLAAVCLL 388
Query: 373 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 419
P ++ ++ + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 389 PEIMRGQFNVPFY--FGGTSVLIIVSVTMDTIQQVQSHLLAHQYEGL 433
>TIGR_CMR|BA_0130 [details] [associations]
symbol:BA_0130 "preprotein translocase, SecY subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557
PROSITE:PS00755 PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021
GO:GO:0005886 GO:GO:0006605 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005622 GO:GO:0065002
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 OMA:FIMWLGE InterPro:IPR026593 GO:GO:0043952
KO:K03076 ProtClustDB:PRK09204 HOGENOM:HOG000080586
RefSeq:NP_842698.1 RefSeq:YP_016735.2 RefSeq:YP_026416.1
ProteinModelPortal:Q81VR0 IntAct:Q81VR0 DNASU:1086476
EnsemblBacteria:EBBACT00000012418 EnsemblBacteria:EBBACT00000015283
EnsemblBacteria:EBBACT00000022223 GeneID:1086476 GeneID:2818223
GeneID:2850579 KEGG:ban:BA_0130 KEGG:bar:GBAA_0130 KEGG:bat:BAS0130
BioCyc:BANT260799:GJAJ-141-MONOMER
BioCyc:BANT261594:GJ7F-143-MONOMER Uniprot:Q81VR0
Length = 433
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 134/406 (33%), Positives = 232/406 (57%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 86
L + R+G +IP+ N + DQ + L L++F GG + I ++GI+P+I A I+
Sbjct: 25 LIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIMPYITASII 83
Query: 87 FQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFXX- 144
QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G + V
Sbjct: 84 VQLLQMDVVPKFSEWAK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNGMVGGQLIL 142
Query: 145 ----XXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 200
G+AF ++GE+I+ +GNG S+LIF I + +P+ + +
Sbjct: 143 NPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSVISQVYQQQ 202
Query: 201 FQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSGGLQ--RSA 252
FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +GG ++
Sbjct: 203 FQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNGGYAGAQNT 262
Query: 253 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYLPTNILLIA 311
+LP KVNS+GV+P+IF+ S L P T+A+F + + +A N + + LI
Sbjct: 263 HLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGMIIYVALIV 322
Query: 312 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 371
F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS+FLA +A
Sbjct: 323 AFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGSIFLAAIAI 382
Query: 372 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 417
P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 383 LPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>UNIPROTKB|P78283 [details] [associations]
symbol:secY "Protein translocase subunit SecY"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0009306 "protein secretion" evidence=ISS] HAMAP:MF_01465
InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00755
PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009306 EMBL:Y08367
EMBL:Y07817 eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 OMA:FIMWLGE InterPro:IPR026593
KO:K03076 ProtClustDB:PRK09204 PIR:B82057 RefSeq:NP_232204.1
ProteinModelPortal:P78283 DNASU:2615593 GeneID:2615593
KEGG:vch:VC2576 PATRIC:20084178 Uniprot:P78283
Length = 444
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 135/418 (32%), Positives = 240/418 (57%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L + R G ++P+ G++ +Q +++ + FSGG + R I +LGI+P+I+A
Sbjct: 30 LLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASILALGIMPYISAS 89
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFX- 143
IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG L VN+
Sbjct: 90 IVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIATGLPNMVNNLVV 148
Query: 144 ---XXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 200
G+ F ++GE+I++ +GNG S+LIF I++ LP + G+T+ +A
Sbjct: 149 IDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPKAIGQTIEQA 208
Query: 201 FQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKV 258
Q ++ L +I ++F ++ +V+++ +R+I +NYA R R +S +LP K+
Sbjct: 209 RQGELHVLLLLLIAVLAFAVIYF-VVFMERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKI 267
Query: 259 NSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSFYLPTNILLIA 311
N +GV+P IF++S + PGTLA++ G L ++AL+PG Y+ I
Sbjct: 268 NMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPLYVMLYAAAII 327
Query: 312 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 371
FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ +
Sbjct: 328 FFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGALYITFICL 387
Query: 372 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 428
P + ++ + F GTS+LI+V D +VQ ++S +Y+++ + ++ YG
Sbjct: 388 IPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESVLKKANLKGYG 443
>TIGR_CMR|VC_2576 [details] [associations]
symbol:VC_2576 "preprotein translocase, SecY subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_01465 InterPro:IPR002208
Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00755 PROSITE:PS00756
PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0009306 EMBL:Y08367 EMBL:Y07817
eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 OMA:FIMWLGE InterPro:IPR026593
KO:K03076 ProtClustDB:PRK09204 PIR:B82057 RefSeq:NP_232204.1
ProteinModelPortal:P78283 DNASU:2615593 GeneID:2615593
KEGG:vch:VC2576 PATRIC:20084178 Uniprot:P78283
Length = 444
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 135/418 (32%), Positives = 240/418 (57%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L + R G ++P+ G++ +Q +++ + FSGG + R I +LGI+P+I+A
Sbjct: 30 LLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASILALGIMPYISAS 89
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFX- 143
IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG L VN+
Sbjct: 90 IVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIATGLPNMVNNLVV 148
Query: 144 ---XXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 200
G+ F ++GE+I++ +GNG S+LIF I++ LP + G+T+ +A
Sbjct: 149 IDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPKAIGQTIEQA 208
Query: 201 FQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKV 258
Q ++ L +I ++F ++ +V+++ +R+I +NYA R R +S +LP K+
Sbjct: 209 RQGELHVLLLLLIAVLAFAVIYF-VVFMERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKI 267
Query: 259 NSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSFYLPTNILLIA 311
N +GV+P IF++S + PGTLA++ G L ++AL+PG Y+ I
Sbjct: 268 NMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPLYVMLYAAAII 327
Query: 312 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 371
FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ +
Sbjct: 328 FFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGALYITFICL 387
Query: 372 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 428
P + ++ + F GTS+LI+V D +VQ ++S +Y+++ + ++ YG
Sbjct: 388 IPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESVLKKANLKGYG 443
>TIGR_CMR|CHY_2289 [details] [associations]
symbol:CHY_2289 "preprotein translocase, SecY subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006886 "intracellular protein transport" evidence=ISS]
[GO:0008565 "protein transporter activity" evidence=ISS]
HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557
PROSITE:PS00755 PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021
GO:GO:0005886 GO:GO:0006605 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0005622 GO:GO:0065002 eggNOG:COG0201 Gene3D:1.10.3370.10
InterPro:IPR023201 SUPFAM:SSF103491 TIGRFAMs:TIGR00967 OMA:FIMWLGE
InterPro:IPR026593 GO:GO:0043952 KO:K03076 ProtClustDB:PRK09204
HOGENOM:HOG000080586 RefSeq:YP_361098.1 ProteinModelPortal:Q3A9T6
STRING:Q3A9T6 GeneID:3727431 KEGG:chy:CHY_2289 PATRIC:21277649
BioCyc:CHYD246194:GJCN-2288-MONOMER Uniprot:Q3A9T6
Length = 419
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 134/397 (33%), Positives = 225/397 (56%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 86
L + R+G +IP+ G+N + ++L D SGG + I ++ I P+INA I+
Sbjct: 25 LLVFRIGAHIPVPGINLARMEELIQSGTILGFFDVISGGAFKKFTIFAMSITPYINASII 84
Query: 87 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFXXXX 146
QLL + P L+ L K EGE GR+K+ +Y RY +V A +Q + LR +N+
Sbjct: 85 MQLLTVVIPYLEKLAK-EGEEGRRKITEYVRYGTVILAFIQGFFMAIGLRSALNNPGILT 143
Query: 147 XXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG-- 204
G+AF ++GE+I++ +GNG SL+IF I+S +P S +T+ + G
Sbjct: 144 YLYVALALTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVSRIPGSI-KTIIDYVSAGTA 202
Query: 205 NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--GGLQRSAYLPFKVNSSG 262
N + + + + + + +V V EA+R+IP+ YA R R GG +S +LP KVN +G
Sbjct: 203 NILNVLILAVIAVAAIYAVVVVNEAQRRIPVQYAKRVVGRRVYGG--QSTHLPIKVNQAG 260
Query: 263 VMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI--LLIAFFNYYYTFL 320
V+PIIF++S L P T+A + + + + G+ + T + LLI F Y+YT +
Sbjct: 261 VIPIIFASSLLMFPITIAGWFPQNSFAQWVLKYFGWGTV-INTILYALLIIGFTYFYTAI 319
Query: 321 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 380
++P D++E LK+ G IP +RPG+ TA ++ V+SR++ G+VFLA +A P ++
Sbjct: 320 IMNPLDIAENLKKYGGFIPGIRPGRPTAEYIDKVMSRVTFAGAVFLAFIAILPNIVMAIA 379
Query: 381 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 417
+ F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 380 RIPNVT-FGGTALLIVVGVALDTMKQLESYLLMRHYQ 415
>NCBI_NP|NP_354903.2 [details] [associations]
symbol:prlA "preprotein translocase subunit SecY"
species:176299 "Agrobacterium fabrum str. C58" [GO:0015627 "type II
protein secretion system complex" evidence=ISS] [GO:0015628
"protein secretion by the type II secretion system" evidence=ISS]
REFSEQ:NC_003062 Ncbi:NP_354903
Length = 446
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 143/407 (35%), Positives = 229/407 (56%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNL--DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L + RLG +IPL G+N EA+ N +L + F+GG + R+ I +LGI+P+I+A
Sbjct: 34 LLVYRLGTHIPLPGLNPEAYAQAFRGQANGILGLFNMFAGGAVERMAIFALGIMPYISAS 93
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP---YVND 141
I+ QL+ + P L+ L K+EGEAGRK + QYTRY +V +QA G + L V D
Sbjct: 94 IIVQLMTSVVPSLEAL-KKEGEAGRKIINQYTRYGTVLLGTLQAYGIAVGLESGNGLVVD 152
Query: 142 FXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAF 201
G+ F ++GE+I+ +GNG SL+IF I + LP + T+ E
Sbjct: 153 PGMFFRVSTVITLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAGLPKALAGTL-ELG 211
Query: 202 QDGNYIGLAT-IIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 256
+ G L+T +I+ +++ +G IV+V+ A+R++ I Y R +++LP
Sbjct: 212 RTG---ALSTPLILMVVIVAIGVIALIVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPL 268
Query: 257 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA----LNPGGSFYLPTNILLIAF 312
K+N++GV+P IF++S L LP T A F G L A + L G ++ LLIAF
Sbjct: 269 KLNTAGVIPAIFASSLLLLPATAAGFAGNTNLPTWATSIIASLQHGQPLFMALYGLLIAF 328
Query: 313 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 372
F ++YT + +P D ++ LK+ G IP +RPG+ TA ++ VL+RI+V+G+++L +
Sbjct: 329 FAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAIYLVFVCIL 388
Query: 373 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 419
P + T + G GTS+LI+V DT ++Q +I+Q+Y+ +
Sbjct: 389 PETLIARTGIPLALG--GTSLLIVVSVTLDTVAQIQGHLIAQQYEGL 433
>TIGR_CMR|CPS_0621 [details] [associations]
symbol:CPS_0621 "preprotein translocase, SecY subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557
PROSITE:PS00755 PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021
GO:GO:0005886 GO:GO:0006605 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0065002 eggNOG:COG0201
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 HOGENOM:HOG000080585 OMA:FIMWLGE
InterPro:IPR026593 GO:GO:0043952 KO:K03076 RefSeq:YP_267371.1
ProteinModelPortal:Q488Z3 STRING:Q488Z3 GeneID:3521449
KEGG:cps:CPS_0621 PATRIC:21464569
BioCyc:CPSY167879:GI48-708-MONOMER Uniprot:Q488Z3
Length = 445
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 133/417 (31%), Positives = 239/417 (57%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L + RLG ++P+ G++ +Q +++ + FSGG + R + +LGI+P+I+A
Sbjct: 32 LVVLRLGSFVPIPGIDAAVLAQFFEQQKGTIVEMFNMFSGGALERASVLALGIMPYISAS 91
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ--AIGQVL--YLRPYVN 140
I+ QLL ++P + +L K+EGEAGR+K+ QYTRY ++ A VQ AI + L ++ V
Sbjct: 92 IIMQLLTVVHPAMAEL-KKEGEAGRRKISQYTRYGTLVLATVQSIAIARSLPEMMQGLVI 150
Query: 141 DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 200
+ G+ F ++GE+I++ +GNG S++IF I++ +P++ G+T AE
Sbjct: 151 NAGFSFYFTAVISLITGTMFLMWLGEQITERGIGNGISIIIFAGIVAGMPSAVGQT-AEM 209
Query: 201 FQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKV 258
+ G L ++I ++ + +V+V+ +R+I +NYA R R +S +LP KV
Sbjct: 210 ARQGELHLLVLLLIGVVVFAVTFLVVFVERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKV 269
Query: 259 NSSGVMPIIFSTSSLALPGTLARFTG-----IAA-LKKAAVALNPGGSFYLPTNILLIAF 312
N +GV+P IF++S + PGTLA + G +A L+ + A++PG Y+ I F
Sbjct: 270 NMAGVIPPIFASSLILFPGTLASWFGQGDGPVADFLQGVSGAMSPGQPLYVMMLAAAIIF 329
Query: 313 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 372
F ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G+ ++ +
Sbjct: 330 FCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLCGAAYITFVCLV 389
Query: 373 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 428
P + + + F GTS+LI+V D +VQ ++S +Y N+ + ++ YG
Sbjct: 390 PQFMIMAWDVQFY--FGGTSLLIIVVVIMDFMAQVQTHMMSHQYDNVLKKANLKGYG 444
>UNIPROTKB|P0AGA2 [details] [associations]
symbol:secY species:83333 "Escherichia coli K-12"
[GO:0043952 "protein transport by the Sec complex" evidence=IMP]
[GO:0065002 "intracellular protein transmembrane transport"
evidence=IMP] [GO:0006886 "intracellular protein transport"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA;IDA]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344
PIRSF:PIRSF004557 PROSITE:PS00755 PROSITE:PS00756 EMBL:X01563
PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U18997 GO:GO:0005622 GO:GO:0065002 TCDB:3.A.5.1.1 PDB:3J01
PDBsum:3J01 eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 HOGENOM:HOG000080585
OMA:FIMWLGE InterPro:IPR026593 GO:GO:0043952 PDB:2AKH PDB:2AKI
PDBsum:2AKH PDBsum:2AKI PIR:A04473 RefSeq:NP_417759.1
RefSeq:YP_492132.1 ProteinModelPortal:P0AGA2 SMR:P0AGA2
DIP:DIP-59302N IntAct:P0AGA2 PRIDE:P0AGA2
EnsemblBacteria:EBESCT00000000476 EnsemblBacteria:EBESCT00000018444
GeneID:12934410 GeneID:947799 KEGG:ecj:Y75_p3876 KEGG:eco:b3300
PATRIC:32122032 EchoBASE:EB0759 EcoGene:EG10766 KO:K03076
ProtClustDB:PRK09204 BioCyc:EcoCyc:SECY
BioCyc:ECOL316407:JW3262-MONOMER EvolutionaryTrace:P0AGA2
Genevestigator:P0AGA2 Uniprot:P0AGA2
Length = 443
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 130/416 (31%), Positives = 236/416 (56%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L + R+G +IP+ G++ L+Q +++ + FSGG + R I +LGI+P+I+A
Sbjct: 30 LIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISAS 89
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL------RPY 138
I+ QLL ++P L ++ K+EGE+GR+K+ QYTRY ++ AI Q+IG L +
Sbjct: 90 IIIQLLTVVHPTLAEI-KKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGL 148
Query: 139 VNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 198
V + G+ F ++GE+I++ +GNG S++IF I++ LP + T+
Sbjct: 149 VINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIE 208
Query: 199 EAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFK 257
+A Q D +++ L + + + +V+V+ +R+I +NYA R R +S +LP K
Sbjct: 209 QARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLK 268
Query: 258 VNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLIAFF 313
VN +GV+P IF++S + P T+A + TG L ++ L PG Y+ I FF
Sbjct: 269 VNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFF 328
Query: 314 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 373
++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R++++G++++ + P
Sbjct: 329 CFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIP 388
Query: 374 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN-IEFYDIDSYG 428
+ + + F GTS+LI+V D +VQ ++S +Y++ ++ ++ YG
Sbjct: 389 EFMRDAMKVPFY--FGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYG 442
>TIGR_CMR|BA_2734 [details] [associations]
symbol:BA_2734 "preprotein translocase, SecY subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557
PROSITE:PS00755 PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886
GO:GO:0006605 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005622 GO:GO:0065002
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 InterPro:IPR026593 GO:GO:0043952 KO:K03076
HOGENOM:HOG000080586 OMA:HIIKIVL RefSeq:NP_845084.1
RefSeq:YP_019374.1 RefSeq:YP_028807.1 ProteinModelPortal:Q81PR7
IntAct:Q81PR7 DNASU:1087864 EnsemblBacteria:EBBACT00000009684
EnsemblBacteria:EBBACT00000013719 EnsemblBacteria:EBBACT00000019913
GeneID:1087864 GeneID:2816407 GeneID:2848183 KEGG:ban:BA_2734
KEGG:bar:GBAA_2734 KEGG:bat:BAS2547 ProtClustDB:PRK12907
BioCyc:BANT260799:GJAJ-2612-MONOMER
BioCyc:BANT261594:GJ7F-2705-MONOMER Uniprot:Q81PR7
Length = 434
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 134/406 (33%), Positives = 230/406 (56%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 86
L + R+G +IP+ N E DQ ++L L+ F GG + I ++GI P+I A I+
Sbjct: 25 LIVFRIGTFIPVPHTNAEVLKIQ-DQANVLGMLNVFGGGALQHFSIFAVGITPYITASII 83
Query: 87 FQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-----PYVN 140
QLL + PK + K +GE GRKK Q+TRY ++ A +QAIG +
Sbjct: 84 VQLLQMDVIPKFSEWAK-QGEMGRKKSAQFTRYFTIILAFIQAIGMSYGFNNIAGGQLIT 142
Query: 141 DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 200
D G+AF ++GE+I+ +GNG S+LIF +++ +P + +
Sbjct: 143 DQSWTTYLFIATVLTAGTAFLLWLGEQITANGVGNGISMLIFAGLVAAIPNVANQIYLQQ 202
Query: 201 FQD-GNYIGLATI---IISFILL--VLGIVYVQEAERKIPINYASRYTSRSGGLQ--RSA 252
FQ+ G+ + + I +I ++L V+G++Y+Q+A RKIPI YA + S + Q ++
Sbjct: 203 FQNAGDQLFMHIIKMLLIGLVILAIVVGVIYIQQAVRKIPIQYA-KAVSGNNQYQGAKNT 261
Query: 253 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYLPTNILLIA 311
+LP KVNS+GV+P+IF+++ L P T+A+ +++ K VA L+ + + LI
Sbjct: 262 HLPLKVNSAGVIPVIFASAFLMTPRTIAQLFPDSSVSKWLVANLDFAHPIGMTLYVGLIV 321
Query: 312 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 371
F Y+Y F+Q++P+ ++E LK+Q +P +RPGKST ++ +L R++ +G++FL ++
Sbjct: 322 AFTYFYAFIQVNPEQMAENLKKQNGYVPCIRPGKSTEQYVTKILYRLTFIGAIFLGAISI 381
Query: 372 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 417
P V + L GTS+LI+VG A +T + ++++++ + YK
Sbjct: 382 LPLVFTKIATLPPSAQIGGTSLLIIVGVALETMKTLESQLVKRHYK 427
>TIGR_CMR|SO_0251 [details] [associations]
symbol:SO_0251 "preprotein translocase, SecY subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_01465 InterPro:IPR002208
Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00755 PROSITE:PS00756
PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886 GO:GO:0006605
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0065002
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 HOGENOM:HOG000080585 OMA:FIMWLGE
InterPro:IPR026593 GO:GO:0043952 KO:K03076 ProtClustDB:PRK09204
RefSeq:NP_715891.1 ProteinModelPortal:Q8EK50 GeneID:1168134
KEGG:son:SO_0251 PATRIC:23520195 Uniprot:Q8EK50
Length = 446
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 129/400 (32%), Positives = 228/400 (57%)
Query: 31 RLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 88
R G ++P+ G++ Q S +L + FSGG + R I +LGI+P+I+A I+ Q
Sbjct: 33 RAGSFVPIPGIDAAVLAELFAQQSGTILGMFNMFSGGALERASIFALGIMPYISASIIMQ 92
Query: 89 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR---P-YVNDFXX 144
LL ++P L +L K+EGE+GRKK+ QYTR+ ++ Q++G L P V +
Sbjct: 93 LLTVVHPALAEL-KKEGESGRKKISQYTRWGTLVLGTFQSVGIATGLPNLVPGLVVNIGF 151
Query: 145 XXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-D 203
G+ F ++GE+I++ +GNG S+LIF I++ LP++ G+T +A Q D
Sbjct: 152 GFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPSAIGQTAEQARQGD 211
Query: 204 GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGV 263
N + L + + + +V+V+ +R+I +NYA R R +S +LP K+N +GV
Sbjct: 212 LNVLVLLLLAVIIFAVTYFVVFVERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKINMAGV 271
Query: 264 MPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 319
+P IF++S + PGTLA++ G ++ L ++A++PG Y I FF ++YT
Sbjct: 272 IPPIFASSIILFPGTLAQWFGQNESMSWLSDFSLAVSPGQPLYSLLYAAAIIFFCFFYTA 331
Query: 320 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 379
L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G++++ + P +
Sbjct: 332 LVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGALYITFICLIPEFMLIA 391
Query: 380 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 419
+ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 392 WKVQFY--FGGTSLLIMVVVIMDFMAQVQTHMMSHQYESV 429
>TIGR_CMR|CJE_1856 [details] [associations]
symbol:CJE_1856 "preprotein translocase, SecY subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0016020 "membrane"
evidence=ISS] HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344
PIRSF:PIRSF004557 PROSITE:PS00755 PROSITE:PS00756 PANTHER:PTHR10906
GO:GO:0016021 GO:GO:0005886 GO:GO:0006605 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0065002
eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 HOGENOM:HOG000080585
InterPro:IPR026593 GO:GO:0043952 KO:K03076 ProtClustDB:PRK09204
PIR:D81266 RefSeq:YP_179826.1 ProteinModelPortal:Q5HSA9
STRING:Q5HSA9 GeneID:3232483 KEGG:cjr:CJE1856 PATRIC:20045544
OMA:HIIKIVL BioCyc:CJEJ195099:GJC0-1895-MONOMER Uniprot:Q5HSA9
Length = 421
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 136/408 (33%), Positives = 227/408 (55%)
Query: 26 YLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 83
+L R+ Y+P+ GVN + N +QN+ L + FSGG R I SLGI+P+I A
Sbjct: 15 FLFAYRVLAYVPVPGVNADVIAEFFNNNQNNALGLFNVFSGGAAERFSIISLGIMPYITA 74
Query: 84 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY----- 138
I+ +LLA P + + K+E ++ +K +Q RYA++ +VQ+IG + L+
Sbjct: 75 SIIMELLAATFPNIGKM-KKERDS-MQKYMQIIRYATIVITLVQSIGVAIGLQSLHGRGG 132
Query: 139 -----VNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 193
V D G+ ++GE+I+ +GNG SL+IF I+S +P +
Sbjct: 133 AGAIMVEDLNMFIALCAISMLA-GTMLLMWLGEQITQRGIGNGISLIIFAGIVSGIPRAI 191
Query: 194 GRTVAEAFQ-DGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQRS 251
TV + + N++ A I + IL+ +G I+Y++ ER+IPI+Y+ + ++ +
Sbjct: 192 SGTVGQINSGEMNFL-TAFAIFALILITIGVIIYIELGERRIPISYSRKVVMQNQNKRIM 250
Query: 252 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIA 311
Y+P K+N SGV+P IF+++ L P T+ + + L+ LNP G + L +
Sbjct: 251 NYIPIKLNLSGVIPPIFASAILMFPTTILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVI 310
Query: 312 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 371
FF Y+Y + + D++E LK+QG IP +RPG+ T+++L V SR+++ GS++L ++A
Sbjct: 311 FFAYFYASIVFNAKDIAENLKKQGGFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVAT 370
Query: 372 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 419
P V+ + + F F GTSVLI+V A DT RK++A+I KY+ +
Sbjct: 371 LPWVLVKFMGVP-FH-FGGTSVLIVVQVALDTMRKIEAQIYMSKYQTL 416
>UNIPROTKB|P0A5Z2 [details] [associations]
symbol:secY "Protein translocase subunit SecY" species:1773
"Mycobacterium tuberculosis" [GO:0005576 "extracellular region"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0040007 "growth" evidence=IMP] [GO:0051701 "interaction with
host" evidence=TAS] [GO:0052059 "evasion or tolerance by symbiont
of host-produced reactive oxygen species" evidence=TAS] [GO:0052572
"response to host immune response" evidence=TAS] HAMAP:MF_01465
InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00755
PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886
GO:GO:0040007 Reactome:REACT_116125 GO:GO:0005576 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0015031
EMBL:BX842574 GO:GO:0052059 TCDB:3.A.5.2.2 eggNOG:COG0201
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 OMA:FIMWLGE InterPro:IPR026593 KO:K03076
ProtClustDB:PRK09204 PIR:G70822 RefSeq:NP_215246.1
RefSeq:NP_335176.1 RefSeq:YP_006514076.1 ProteinModelPortal:P0A5Z2
SMR:P0A5Z2 PRIDE:P0A5Z2 EnsemblBacteria:EBMYCT00000001582
EnsemblBacteria:EBMYCT00000069300 GeneID:13318622 GeneID:888559
GeneID:926050 KEGG:mtc:MT0756.1 KEGG:mtu:Rv0732 KEGG:mtv:RVBD_0732
PATRIC:18123397 TubercuList:Rv0732 HOGENOM:HOG000080586
Uniprot:P0A5Z2
Length = 441
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 133/414 (32%), Positives = 230/414 (55%)
Query: 28 ALSRLGIYIP-LGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 86
AL G+ P + +EA G Q + S ++ FSGG + +L + ++G++P+I A I+
Sbjct: 33 ALPSPGVNFPNVQQCIKEASAGEAGQ--IYSLINLFSGGALLKLTVFAVGVMPYITASII 90
Query: 87 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR---------- 136
QLL + P+ ++L+K EG+AG+ K+ QYTRY ++ AI+QA V
Sbjct: 91 VQLLTVVIPRFEELRK-EGQAGQSKMTQYTRYLAIALAILQATSIVALAANGGLLQGCSL 149
Query: 137 PYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 196
+ D G+A ++GE I++ +GNG SLLIF I + +PA G++
Sbjct: 150 DIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNGMSLLIFVGIAARIPAE-GQS 208
Query: 197 VAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--GGLQRSAYL 254
+ E+ G + A + I++V G+V+V++ +R+IP+ YA R R GG S YL
Sbjct: 209 ILES--RGGVVFTAVCAAALIIIV-GVVFVEQGQRRIPVQYAKRMVGRRMYGGT--STYL 263
Query: 255 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAAL----KKAAVALN-PGGSFYLPT 305
P KVN +GV+P+IF++S + +P + + +G+ K L+ P Y+
Sbjct: 264 PLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGVVGNSWWDKFVGTYLSDPSNLVYIGI 323
Query: 306 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 365
LI FF Y+Y + +PD+ ++++K+ G IP +RPG+ TA +L+ VLSRI++ GS++
Sbjct: 324 YFGLIIFFTYFYVSITFNPDERADEMKKFGGFIPGIRPGRPTADYLRYVLSRITLPGSIY 383
Query: 366 LAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAEIISQKYK 417
L ++A P + Q + F GT+VLI++G DT ++++++++ + Y+
Sbjct: 384 LGVIAVLPNLFLQIGAGGTVQNLPFGGTAVLIMIGVGLDTVKQIESQLMQRNYE 437
>TIGR_CMR|DET_0494 [details] [associations]
symbol:DET_0494 "preprotein translocase, SecY subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0016020 "membrane"
evidence=ISS] HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344
PIRSF:PIRSF004557 PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021
GO:GO:0005886 GO:GO:0006605 GO:GO:0005622 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0065002 eggNOG:COG0201
Gene3D:1.10.3370.10 InterPro:IPR023201 SUPFAM:SSF103491
TIGRFAMs:TIGR00967 HOGENOM:HOG000080585 OMA:FIMWLGE
InterPro:IPR026593 GO:GO:0043952 KO:K03076 ProtClustDB:PRK09204
RefSeq:YP_181238.1 ProteinModelPortal:Q3Z961 STRING:Q3Z961
GeneID:3230236 KEGG:det:DET0494 PATRIC:21608057
BioCyc:DETH243164:GJNF-494-MONOMER Uniprot:Q3Z961
Length = 438
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 130/407 (31%), Positives = 216/407 (53%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 86
L +R ++PL GV+ A DQN L LD FSGG + + +LG+ P+I A I+
Sbjct: 34 LVAARFIAHVPLPGVDSAALQDLFDQNGALGMLDLFSGGAMRYFSVAALGVYPYITASII 93
Query: 87 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFXX 144
LL + PKL L K EGEAGR K+ T + +V A + Q+L L+ V
Sbjct: 94 MTLLTPVIPKLTALSK-EGEAGRNKINTITHWLAVPTAALAGYSQLLLLQREGAVAQTEP 152
Query: 145 XXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 204
G+ F ++GE+I++ +GNG SL+IF I++ LP + GR + + Q
Sbjct: 153 LAAVAIVLSIVAGTMFMVWLGEQITNYGIGNGISLIIFAGIVAGLPDTIGRGLMASDQ-- 210
Query: 205 NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR---SAYLPFKVNSS 261
+ GLA I +L + IV EA R+IP+ YA RSG + R +++P +VNS+
Sbjct: 211 -FAGLAVYAIMALLTTVLIVIFTEAHRRIPVQYAQTVI-RSGKMYRRGGESHIPLRVNSA 268
Query: 262 GVMPIIFSTSSLALPGTLARFTGIAALKK-----------AAVALNPGGSFYLPTNILLI 310
G++P+IF+++ + LPG +A + + + ++ A PGG Y +
Sbjct: 269 GMIPLIFASALVMLPGLVASYFMAGSTEDPNFWNTIYNIFSSSASMPGGLVYWGLYFFMT 328
Query: 311 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 370
F ++YT + + D+ L+RQG +P +RPGK T +L V+ RI+ G++FL +A
Sbjct: 329 IIFAFFYTMVTFEQQDIPGTLQRQGGFVPGIRPGKMTDQYLSGVIGRITWAGALFLGFVA 388
Query: 371 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 417
P + + T + + + +LI+VG A DT ++++A+++ ++Y+
Sbjct: 389 IMPFIAREVTGIQVIQ-LSSFGMLIVVGVALDTMKQLEAQLVMRRYE 434
>TIGR_CMR|APH_0299 [details] [associations]
symbol:APH_0299 "preprotein translocase, SecY subunit"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0005887 "integral
to plasma membrane" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=ISS] HAMAP:MF_01465
InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00755
PROSITE:PS00756 PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886
GO:GO:0006605 GO:GO:0005622 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0065002 eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 HOGENOM:HOG000080585
OMA:FIMWLGE InterPro:IPR026593 GO:GO:0043952 KO:K03076
ProtClustDB:PRK09204 RefSeq:YP_504911.1 ProteinModelPortal:Q2GL40
STRING:Q2GL40 GeneID:3930869 KEGG:aph:APH_0299 PATRIC:20949172
BioCyc:APHA212042:GHPM-329-MONOMER Uniprot:Q2GL40
Length = 434
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 136/403 (33%), Positives = 214/403 (53%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNL---DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 83
L + RLG YIP+ G+N +G + +L + FSGG +GR+ I +L ++P+I +
Sbjct: 23 LIVYRLGTYIPIPGINL-GVIGEIVSGHTTGVLGIFNVFSGGALGRMTIFALNVMPYIVS 81
Query: 84 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY----- 138
I+ QLL+ P L ++ ++EGE GR K+ YTRY +V F IVQ + +L L
Sbjct: 82 SIMVQLLSVAVPALNEM-RQEGELGRAKINSYTRYLTVVFCIVQGLMILLGLERMNTAEV 140
Query: 139 --VNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 196
V D G+ F ++GERI+ +GNG SL+IF IIS LP+S +
Sbjct: 141 MVVLDPGLTFRVVGISSMLAGTMFLLWLGERINLKGIGNGISLIIFVGIISELPSSLS-S 199
Query: 197 VAEAFQDGNYIGLATIII--SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 254
V + G G A ++ SF+ L L I++ + + RK+ + Y R S+Y+
Sbjct: 200 VFMLGKRGELSGFAVFLVMASFLALFLLIIFFERSYRKVLVQYPKRQVGGRFYNSDSSYM 259
Query: 255 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYLPTNILLIAFF 313
P K+N SGV+P IF+ + L TLA+F+ ++ + + Y+ + LI FF
Sbjct: 260 PLKINISGVIPPIFANALLLSLMTLAKFSAGSSWSDFVLRYFHTESVLYIVVYVALIMFF 319
Query: 314 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 373
++YT L D + +E LK+ IP RPGKST + V+ R++V+G+V+L+++ P
Sbjct: 320 TFFYTSLVFDSKETAEMLKKNSGFIPGKRPGKSTMEYFDQVIRRLTVIGAVYLSVVCVVP 379
Query: 374 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 416
V+ ++ G GTS LI+V DT +VQ +I S +Y
Sbjct: 380 EVVRHYCAVSFTLG--GTSFLIIVNVINDTFSQVQTQIYSGRY 420
>TIGR_CMR|ECH_0428 [details] [associations]
symbol:ECH_0428 "preprotein translocase, SecY subunit"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] HAMAP:MF_01465
InterPro:IPR002208 Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00755
PANTHER:PTHR10906 GO:GO:0016021 GO:GO:0005886 GO:GO:0006605
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0005622 GO:GO:0065002
eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 HOGENOM:HOG000080585
OMA:FIMWLGE InterPro:IPR026593 GO:GO:0043952 KO:K03076
ProtClustDB:PRK09204 RefSeq:YP_507246.1 ProteinModelPortal:Q2GH37
STRING:Q2GH37 GeneID:3927650 KEGG:ech:ECH_0428 PATRIC:20576333
BioCyc:ECHA205920:GJNR-429-MONOMER Uniprot:Q2GH37
Length = 432
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 131/406 (32%), Positives = 214/406 (52%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQNSL--LSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L + RLG YIP+ G+N + + ++S+ L + FSGG +GR+ + +L ++P+I +
Sbjct: 22 LIIYRLGTYIPIPGINPDVIDAVVTKHSVGVLGIFNVFSGGALGRMTVFALNVMPYIVSS 81
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY------ 138
I+ QLL+ PKL +L ++ GE GR K+ Y RY ++ F +VQ +L L
Sbjct: 82 IIIQLLSVTIPKLNEL-RQNGELGRIKINSYIRYMTIFFCMVQGFVILLGLEKMNTETSI 140
Query: 139 -VNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 197
V + G+ F ++GERI+ +GNG S++IFT I++ LP SF
Sbjct: 141 VVIEPGLLFRIVGISSLLGGTMFLLWLGERINKNGIGNGVSMIIFTGIVAELPGSFSSMF 200
Query: 198 AEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 254
++GN ++ L +++ F LL+L I++++++ RKI + Y R S Y+
Sbjct: 201 LLG-KNGNVPIFVILLMLLVFFALLLL-IIFIEKSYRKILVQYPKRQVKNKLYGSSSTYI 258
Query: 255 PFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFF 313
P K+N SGV+P IF+ + L P T+A F G + + G Y+ LLI FF
Sbjct: 259 PLKINISGVIPPIFANALLLSPITVANFHQGSPWSDFILMHFSSGKLLYMGCYALLIIFF 318
Query: 314 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 373
++YT D + SE LK+ G +P RPG T + V+ R++VLGS++L ++ P
Sbjct: 319 AFFYTTFVFDSKETSEILKKNGGFVPGKRPGNGTCEYFNYVIKRLTVLGSIYLTVICIIP 378
Query: 374 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 419
+I ++ G GTS LI++ DT +VQ + S +Y +
Sbjct: 379 ELIRYNYSISFTLG--GTSFLIIINVIIDTFSQVQTHLYSSRYSTL 422
>UNIPROTKB|P25014 [details] [associations]
symbol:secY "Protein translocase subunit SecY" species:2762
"Cyanophora paradoxa" [GO:0033115 "cyanelle thylakoid membrane"
evidence=IDA] HAMAP:MF_01465 InterPro:IPR002208 Pfam:PF00344
PIRSF:PIRSF004557 PROSITE:PS00755 PROSITE:PS00756 PANTHER:PTHR10906
GO:GO:0016021 GO:GO:0015031 GO:GO:0009528 Gene3D:1.10.3370.10
InterPro:IPR023201 SUPFAM:SSF103491 TIGRFAMs:TIGR00967
InterPro:IPR026593 EMBL:M30487 EMBL:U30821 PIR:T06875
RefSeq:NP_043187.1 ProteinModelPortal:P25014 TCDB:3.A.5.6.1
GeneID:801593 ProtClustDB:CHL00161 GO:GO:0033115 Uniprot:P25014
Length = 492
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 112/401 (27%), Positives = 207/401 (51%)
Query: 29 LSRLGIYIPLGGV----NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 84
L R+G ++P+ G + E+F N +N L + L+ SGG +G +LGI+P++NA
Sbjct: 63 LIRIGTFLPIPGTALNFDLESFQQNNSRNELANILNLLSGGAFLEIGFFTLGILPYMNAS 122
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFX 143
Q+L +I P L+ QK + E +++ ++TRY +V +A +Q+I +++RPY ++
Sbjct: 123 FFLQVLTKILPSLERFQKEQEEIAQREFKKWTRYLTVIWAFIQSIVISWIWIRPYALNWD 182
Query: 144 XXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS----FGRTVAE 199
G+ I E+I+++ L NG+SLLIF +II+ +P S F +
Sbjct: 183 FFLGLKVVVALTLGAVIVMIIAEQITEIGLTNGSSLLIFINIIARIPNSIEQLFNSNINW 242
Query: 200 AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG------GLQR--- 250
F + + + ++ +SFI + + I+ +QE+ R +P+ A + R +R
Sbjct: 243 TFPMISSL-ILSLSLSFITMFV-IIGLQESGRPVPVLIARQEAERQKFNEPITEAERRKT 300
Query: 251 SAYLPFKVNSSGVMPIIFSTS--SLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL 308
AY+ F++ +G+MP+IF+++ LALP + P S + L
Sbjct: 301 QAYIFFQLLPAGIMPVIFASTIFDLALPAFTNFLLQQGNWGYQLIKSFPFNSLFKDFCYL 360
Query: 309 L-IAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 366
+ I F+ Y + ++P ++E L A IP VRPG T + + ++ R++ +GS L
Sbjct: 361 ITIMLFSSNYALTIMINPKTLAENLNSMNALIPGVRPGSETKVYSEQLIHRLNFIGSFVL 420
Query: 367 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 407
A++ P+++E++ L + + S+ I +G A DT R++
Sbjct: 421 ALVCILPSIVERSLGLPKLQILSPVSISIALGVAVDTTRRI 461
>TIGR_CMR|NSE_0285 [details] [associations]
symbol:NSE_0285 "preprotein translocase, SecY subunit"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_01465 InterPro:IPR002208
Pfam:PF00344 PIRSF:PIRSF004557 PROSITE:PS00755 PANTHER:PTHR10906
GO:GO:0016021 GO:GO:0005886 GO:GO:0006605 GO:GO:0005622
GO:GO:0065002 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 TIGRFAMs:TIGR00967 HOGENOM:HOG000080585
OMA:FIMWLGE InterPro:IPR026593 GO:GO:0043952 KO:K03076
RefSeq:YP_506176.1 ProteinModelPortal:Q2GEC0 STRING:Q2GEC0
GeneID:3932107 KEGG:nse:NSE_0285 PATRIC:22680663
ProtClustDB:CLSK2527980 BioCyc:NSEN222891:GHFU-312-MONOMER
Uniprot:Q2GEC0
Length = 436
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 115/407 (28%), Positives = 199/407 (48%)
Query: 27 LALSRLGIYIPLGGVN----REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFIN 82
L + R+G +I L VN E F NL + ++ ++FSGG +GR+ + +L ++P+I
Sbjct: 26 LLVYRIGTFITLPSVNPAHVSEIFSANLS-SGIIGMFNTFSGGALGRMTLFALNVMPYIV 84
Query: 83 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ-YTRYASV------GFAIVQAIGQVLYL 135
+ IV Q+ + L+ K E + L Y++ ++ GF IV + +
Sbjct: 85 SSIVVQIFFSM---LKSEGKVSAEFMNESRLSFYSKLVALFLAFFQGFIIVAGLERTKAF 141
Query: 136 RPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 195
+F G+ ++G++I+ +GNG SL+IF I++ +PA FG
Sbjct: 142 VGGNEEFYSLLKYTSVLTLVCGTFSLIWLGQQINSRGIGNGMSLIIFAGIVAEMPAIFGN 201
Query: 196 TVAEAFQDGNYIGLATIIISFILLVLGI---VYVQEAERKIPINYASRYTSRSGGLQRSA 252
+ G+ G+ I +S LLV + V V+ A + IP++Y R T S ++
Sbjct: 202 LFSGIGSPGS--GILGIFVSLSLLVFVVFLVVLVERASKNIPVHYPRRRTWGSTHGDAAS 259
Query: 253 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYLPTNILLIA 311
+P K+N SGV+P IF+ + + P TLA F+ + L + + + G Y + L+
Sbjct: 260 NIPVKINVSGVIPPIFANALILFPLTLANFSAESHLGEFIIRYFSVGQPLYFLLHSCLLV 319
Query: 312 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 371
FF ++Y+ + ++S+ LK+ A + RPG ST L VL RI+V+G+ +L +
Sbjct: 320 FFCFFYSDFVFNTTEISDSLKKGEAIVAGRRPGISTKRHLDYVLRRITVVGAAYLVCICV 379
Query: 372 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 418
P + A +GTS+LI+V TD ++Q + S Y +
Sbjct: 380 VPEIFRNYFGFDAI--ISGTSLLIIVNVITDLLSQIQVLLFSSHYSS 424
>TAIR|locus:2065868 [details] [associations]
symbol:SCY2 "SECY HOMOLOG 2" species:3702 "Arabidopsis
thaliana" [GO:0005886 "plasma membrane" evidence=ISM] [GO:0009306
"protein secretion" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0009526 "plastid
envelope" evidence=IDA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR002208 Pfam:PF00344
PANTHER:PTHR10906 GO:GO:0016021 EMBL:CP002685 GO:GO:0015031
GO:GO:0031969 GO:GO:0009535 EMBL:AC007071 GO:GO:0009526
eggNOG:COG0201 Gene3D:1.10.3370.10 InterPro:IPR023201
SUPFAM:SSF103491 EMBL:AY062590 EMBL:AY093354 EMBL:BX820289
IPI:IPI00524025 PIR:H84721 RefSeq:NP_180711.4 UniGene:At.27291
ProteinModelPortal:F4IQV7 SMR:F4IQV7 PRIDE:F4IQV7
EnsemblPlants:AT2G31530.1 GeneID:817711 KEGG:ath:AT2G31530
TAIR:At2g31530 HOGENOM:HOG000241422 InParanoid:Q9SIQ4 OMA:YIPFNIN
GO:GO:0033097 Uniprot:F4IQV7
Length = 575
Score = 347 (127.2 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 116/419 (27%), Positives = 198/419 (47%)
Query: 27 LALSRLGIYIPLGGVNREAFVGNLDQNSLLS-TLDSFSGGGIG-RLGICSLGIVPFINAQ 84
L LSR+G +IPL G +R D S +S +++ G +L + LG+ P I A
Sbjct: 163 LVLSRVGYFIPLPGFDRRLIPQ--DYLSFVSGSVEELGEFGAEIKLSLFQLGLSPQIIAS 220
Query: 85 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFXX 144
I+ Q+L + P L L+K EG G +K+ Y + S FAIV+A+ V Y + F
Sbjct: 221 IIMQVLCHVLPSLVKLRK-EGLDGHEKIKSYIWWLSFFFAIVEAL-VVAYTSLQYSVFAA 278
Query: 145 XXXXXXXXXXXX----GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 200
G+ T++ + IS+ G+G+SL+I I++ + + + +
Sbjct: 279 TAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTETLHKMLNQI 338
Query: 201 FQD-GNYIG-LATIIISFILLVLGIVYVQEAERKIPINYAS---RYTSRSGG--LQRSAY 253
N++ L ++ F ++ + V V E RKI + Y SR G + Y
Sbjct: 339 SGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASREGSPITEVEPY 398
Query: 254 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL--LIA 311
+PF +N +G+ P++ +T LA P LA G L LNP + P + + A
Sbjct: 399 IPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVGAPPWVYYSIYA 458
Query: 312 FFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 369
FF + + + P ++++ L + GA IP ++PGK+T +L + + G + L+ L
Sbjct: 459 FFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFL 518
Query: 370 AAGPAVIEQTTHLTAF-RGFA-G-TSVLILVGCATDTARKVQA-EIISQKYKNIEFYDI 424
A V++ +L + +GF+ G TSVLI+VG + R A ++ K ++ Y +
Sbjct: 519 ATASTVLDH--YLRSINQGFSIGFTSVLIIVGSIIELRRSYHAYNVMPSLSKALKRYGV 575
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 429 400 0.00098 117 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 574 (61 KB)
Total size of DFA: 180 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.47u 0.10s 32.57t Elapsed: 00:00:06
Total cpu time: 32.48u 0.10s 32.58t Elapsed: 00:00:06
Start: Tue May 21 06:52:06 2013 End: Tue May 21 06:52:12 2013